| Bacteria |
Enterobacteria |
Escherichia |
| 1/ 73 | 4/ 73 | 73/ 73 | 1/ 73 |
| Salmonella |
| | 1/ 55 | 54/ 55 | 3/ 55 |
| Shigella |
| | | 9/ 24 | |
| Enterobacter |
| 1/ 47 | 1/ 47 | 40/ 47 | 1/ 47 |
| Cronobacter |
| | | 11/ 11 | 3/ 11 |
| Klebsiella |
| 4/ 57 | 11/ 57 | 48/ 57 | 2/ 57 |
| Raoultella |
| | | 4/ 5 | |
| Citrobacter |
1/ 28 | 4/ 28 | 7/ 28 | 21/ 28 | |
| Candidatus Hamiltonella |
| | | 1/ 1 | |
| Shimwellia |
| | | 1/ 1 | |
| Cedecea |
| | | 4/ 4 | 2/ 4 |
| Pluralibacter |
| | | 3/ 3 | |
| Kosakonia |
| | | 9/ 9 | 2/ 9 |
| Kluyvera |
| | | 4/ 6 | |
| Leclercia |
| | | 8/ 8 | |
| Lelliottia |
| | | 3/ 3 | |
| Buttiauxella |
| | | 4/ 4 | 2/ 4 |
| Atlantibacter |
| | | 2/ 2 | |
| Yokenella |
| | | 1/ 1 | |
| Scandinavium |
| | | 1/ 1 | |
| Phytobacter |
| | | 3/ 3 | 2/ 3 |
| Jejubacter |
| | | 1/ 1 | |
| Candidatus Schneideria |
| | | 1/ 1 | |
| Pseudocitrobacter |
| | | 1/ 1 | |
| Siccibacter |
| | | 1/ 1 | |
| Pseudescherichia |
| | 1/ 1 | 1/ 1 | |
| Superficieibacter |
| | | 1/ 1 | |
| Trabulsiella |
| | | 1/ 1 | |
| Yersinia |
| | | 49/ 52 | 2/ 52 |
| Serratia |
| | | 23/ 31 | |
| Chania |
| | | 1/ 1 | |
| Rahnella |
| | | 8/ 8 | |
| Ewingella |
| | | 1/ 1 | |
| Rouxiella |
| | | 2/ 2 | |
| Chimaeribacter |
| | | 1/ 1 | |
| Nissabacter |
| | | 1/ 1 | |
| Prodigiosinella |
| | | | 3/ 3 |
| Pectobacterium |
| | | | 1/ 23 |
| Dickeya |
| | | | 1/ 12 |
| Brenneria |
| | | | 1/ 4 |
| Sodalis |
| | | 1/ 5 | |
| Erwinia |
| | | 11/ 13 | |
| Winslowiella |
| | | 1/ 1 | |
| Pantoea |
| | | 22/ 25 | 1/ 25 |
| Mixta |
| | | 5/ 5 | |
| Tatumella |
| | | 1/ 3 | |
| Photorhabdus |
| | | | 6/ 7 |
| Proteus |
1/ 12 | | | | |
| Xenorhabdus |
| | | | 7/ 9 |
| Providencia |
1/ 16 | 1/ 16 | 2/ 16 | | |
| Arsenophonus |
| | | 4/ 6 | |
| Moellerella |
| | 1/ 1 | | |
| Edwardsiella |
| | | 8/ 8 | |
| Hafnia |
| | | 2/ 3 | 2/ 3 |
| Obesumbacterium |
| | | 1/ 1 | 1/ 1 |
| Other Gammaproteobacteria |
Pasteurella |
2/ 10 | 1/ 10 | 2/ 10 | | |
| Gallibacterium |
| | | | 1/ 3 |
| Bibersteinia |
3/ 4 | 2/ 4 | 2/ 4 | | |
| Stenotrophomonas |
| | | | 1/ 18 |
| Vibrio |
| | 1/ 83 | | 15/ 83 |
| Photobacterium |
| | | | 1/ 5 |
| Pseudomonas |
| 1/231 | 2/231 | 69/231 | 16/231 |
| Azotobacter |
| | | | 3/ 4 |
| Denitrificimonas |
| 1/ 1 | 1/ 1 | | |
| Acinetobacter |
1/108 | 15/108 | 16/108 | 63/108 | |
| Moraxella |
| 1/ 14 | 1/ 14 | | 1/ 14 |
| Aquirhabdus |
| | | 1/ 1 | |
| Shewanella |
| | 2/ 73 | | 1/ 73 |
| Thalassotalea |
| | | | 1/ 4 |
| Moritella |
| | | | 2/ 4 |
| Coxiella |
| | | | 6/ 9 |
| Legionella |
| | | 27/ 30 | 6/ 30 |
| Francisella |
| | | 2/ 46 | 10/ 46 |
| Methylophaga |
| | 1/ 5 | | |
| Reinekea |
| | | | 1/ 1 |
| Aeromonas |
| 1/ 36 | 3/ 36 | | |
| Candidatus Steffania |
| | | 1/ 1 | |
| Betaproteobacteria |
Neisseria |
1/ 46 | | | | |
| Vitreoscilla |
| | | 3/ 4 | |
| Aquella |
| | | 1/ 1 | |
| Crenobacter |
| | | 1/ 1 | |
| Chromobacterium |
| | | 8/ 8 | |
| Aquitalea |
| | | 2/ 2 | |
| Vogesella |
| | | 1/ 1 | |
| Iodobacter |
| | | 2/ 2 | |
| Jeongeupia |
| | | 2/ 2 | |
| Deefgea |
| | | 2/ 2 | |
| Chitinibacter |
| | | 2/ 2 | |
| Laribacter |
| | | 1/ 1 | |
| Microvirgula |
| | | 1/ 1 | |
| Ralstonia |
| | | | 6/ 21 |
| Burkholderia |
| | | 2/ 98 | 8/ 98 |
| Paraburkholderia |
| | | | 1/ 30 |
| Pandoraea |
| | | 14/ 22 | |
| Ephemeroptericola |
| | | 1/ 1 | |
| Advenella |
| | 1/ 3 | 3/ 3 | |
| Alcaligenes |
| | 1/ 9 | | |
| Orrella |
| | | | 1/ 3 |
| Comamonas |
| 1/ 15 | 1/ 15 | | |
| Ottowia |
| | | | 1/ 3 |
| Serpentinimonas |
| | | | 2/ 2 |
| Aquincola |
| | | | 1/ 2 |
| Janthinobacterium |
| | | 9/ 11 | |
| Herbaspirillum |
| | | | 1/ 7 |
| Collimonas |
| | | 2/ 3 | |
| Massilia |
| | | 3/ 10 | |
| Pseudoduganella |
| | | 4/ 7 | |
| Rugamonas |
| | | 1/ 1 | |
| Glaciimonas |
| | | 1/ 1 | |
| Candidatus Vidania |
1/ 1 | | | | |
| Alphaproteobacteria |
Candidatus Gromoviella |
| | | 1/ 1 | |
| Rhizobium |
| | | | 3/ 45 |
| Liberibacter |
| | | 1/ 7 | |
| Bosea |
| | | | 1/ 7 |
| Bartonella |
| | | | 3/ 28 |
| Sphingosinicella |
| | | | 1/ 4 |
| Stella |
| | 1/ 3 | | |
| Azospirillum |
| | | | 1/ 14 |
| Skermanella |
| | | | 1/ 3 |
| Rhodospirillum |
| | | | 2/ 3 |
| Epsilonproteobacteria |
Wolinella |
| | | | 1/ 1 |
| Campylobacter |
| | | | 34/ 83 |
| Aliarcobacter |
| | | | 6/ 11 |
| Arcobacter |
| | | | 10/ 11 |
| Poseidonibacter |
| | | | 2/ 2 |
| Malaciobacter |
| | | | 6/ 6 |
| Halarcobacter |
| | | | 3/ 3 |
| Sulfurovum |
| | | | 3/ 4 |
| Myxococcota |
Myxococcus |
| | 3/ 6 | | 3/ 6 |
| Corallococcus |
| | 2/ 4 | | 2/ 4 |
| Sorangium |
| | 2/ 3 | | |
| Polyangium |
| | 1/ 1 | | |
| Deltaproteobacteria |
Microvenator |
| | 1/ 1 | | |
| Bdellovibrionota |
Fluviispira |
| | | 1/ 1 | |
| Pigmentibacter |
| | | 1/ 1 | |
| Silvanigrella |
| | | 1/ 1 | |
| Bacilli |
Bacillus |
4/150 | 121/150 | 76/150 | | 57/150 |
| Evansella |
| | 1/ 1 | | |
| Sutcliffiella |
| 1/ 2 | 1/ 2 | | 2/ 2 |
| Niallia |
| 3/ 4 | | | 2/ 4 |
| Priestia |
| 7/ 9 | 2/ 9 | 1/ 9 | 4/ 9 |
| Halalkalibacterium (ex Joshi et al. 2022) |
1/ 1 | 1/ 1 | 1/ 1 | | |
| Halalkalibacter |
| | 1/ 1 | | 1/ 1 |
| Shouchella |
2/ 4 | 3/ 4 | 2/ 4 | | 1/ 4 |
| Alkalicoccobacillus |
| 1/ 1 | 1/ 1 | | |
| Alkalihalophilus |
| | 1/ 1 | | 1/ 1 |
| Cytobacillus |
| 8/ 9 | 2/ 9 | | 5/ 9 |
| Oceanobacillus |
3/ 5 | 3/ 5 | 3/ 5 | | 1/ 5 |
| Geobacillus |
1/ 22 | | | | 10/ 22 |
| Parageobacillus |
1/ 5 | | | | 4/ 5 |
| Anoxybacillus |
1/ 9 | 1/ 9 | | | 4/ 9 |
| Lysinibacillus |
2/ 16 | 13/ 16 | | | 12/ 16 |
| Halobacillus |
| 4/ 7 | 1/ 7 | | 1/ 7 |
| Terribacillus |
| 2/ 2 | 1/ 2 | | 1/ 2 |
| Virgibacillus |
2/ 11 | 5/ 11 | 2/ 11 | | 7/ 11 |
| Fictibacillus |
| 3/ 3 | | | 2/ 3 |
| Aeribacillus |
| 2/ 2 | | | |
| Peribacillus |
| 6/ 6 | | | 1/ 6 |
| Radiobacillus |
| 1/ 2 | | | |
| Caldibacillus |
1/ 1 | | | | 1/ 1 |
| Psychrobacillus |
| 3/ 3 | | | 2/ 3 |
| Pradoshia |
| 1/ 1 | | | |
| Gracilibacillus |
1/ 3 | 2/ 3 | 2/ 3 | | 1/ 3 |
| Salicibibacter |
1/ 4 | 2/ 4 | 2/ 4 | | |
| Pontibacillus |
| | | | 1/ 3 |
| Neobacillus |
| 4/ 5 | | | 1/ 5 |
| Metabacillus |
| 6/ 6 | 2/ 6 | | 3/ 6 |
| Lederbergia |
| 1/ 1 | | | |
| Sediminibacillus |
| 1/ 1 | | | 1/ 1 |
| Rossellomorea |
| 3/ 4 | | | 2/ 4 |
| Heyndrickxia |
1/ 5 | 2/ 5 | 1/ 5 | | 4/ 5 |
| Salisediminibacterium |
| | 1/ 2 | | |
| Mangrovibacillus |
| 1/ 1 | | | |
| Gottfriedia |
| | | | 1/ 1 |
| Paenalkalicoccus |
| 1/ 1 | 1/ 1 | | |
| Salipaludibacillus |
| 1/ 1 | | | |
| Mesobacillus |
| 2/ 2 | | | |
| Siminovitchia |
| 1/ 1 | | | |
| Ectobacillus |
| 1/ 1 | | | |
| Alkalihalobacillus |
| 2/ 2 | 1/ 2 | | |
| Pseudalkalibacillus |
| 1/ 1 | | | |
| Domibacillus |
| 1/ 1 | | | |
| Alkalicoccus |
| 1/ 1 | 1/ 1 | | |
| Sporolactobacillus |
| | | | 1/ 1 |
| Pullulanibacillus |
| 1/ 1 | | | |
| Staphylococcus |
33/114 | 11/114 | 9/114 | | 7/114 |
| Mammaliicoccus |
3/ 7 | | 3/ 7 | | |
| Macrococcus |
1/ 6 | 2/ 6 | | | |
| Macrococcoides |
1/ 3 | 1/ 3 | | | |
| Salinicoccus |
| 1/ 1 | 1/ 1 | | |
| Jeotgalicoccus |
| 1/ 1 | | | |
| Nosocomiicoccus |
1/ 2 | 1/ 2 | | | |
| Abyssicoccus |
1/ 1 | | | | |
| Listeria |
| 47/ 50 | | | |
| Brochothrix |
| 1/ 1 | | | |
| Exiguobacterium |
2/ 10 | 2/ 10 | 1/ 10 | | 6/ 10 |
| Gemella |
| 1/ 5 | | | 1/ 5 |
| Brevibacillus |
2/ 14 | 4/ 14 | 5/ 14 | | 8/ 14 |
| Paenibacillus |
8/ 79 | 12/ 79 | 18/ 79 | | 57/ 79 |
| Thermobacillus |
| | | | 1/ 1 |
| Aneurinibacillus |
| 3/ 5 | | | 1/ 5 |
| Cohnella |
| | 2/ 4 | | 3/ 4 |
| Candidatus Pristimantibacillus |
| | | | 1/ 1 |
| Alicyclobacillus |
| 1/ 8 | | | 2/ 8 |
| Tumebacillus |
| | | | 2/ 2 |
| Effusibacillus |
| | | | 1/ 1 |
| Solibacillus |
| 2/ 3 | | | 1/ 3 |
| Planococcus |
| 7/ 14 | | | 6/ 14 |
| Jeotgalibacillus |
| | 1/ 1 | | 1/ 1 |
| Kurthia |
| 1/ 2 | | | 1/ 2 |
| Sporosarcina |
| 3/ 11 | | | 2/ 11 |
| Rummeliibacillus |
| | | | 1/ 1 |
| Paenisporosarcina |
| 1/ 2 | | | 2/ 2 |
| Planomicrobium |
| 1/ 1 | | | 1/ 1 |
| Ureibacillus |
| 1/ 1 | | | 1/ 1 |
| Novibacillus |
1/ 1 | | | | |
| Laceyella |
| 1/ 1 | 1/ 1 | | |
| Thermoactinomyces |
1/ 2 | | | | 1/ 2 |
| Kroppenstedtia |
2/ 2 | | | | |
| Lactococcus |
| | | | 13/ 26 |
| Streptococcus |
26/180 | 41/180 | | | 41/180 |
| Lactobacillus |
2/ 39 | 9/ 39 | | | 21/ 39 |
| Lacticaseibacillus |
| | | | 20/ 21 |
| Lactiplantibacillus |
| 10/ 10 | | | 2/ 10 |
| Liquorilactobacillus |
| | | | 2/ 3 |
| Lentilactobacillus |
| 1/ 8 | | | 6/ 8 |
| Levilactobacillus |
| 5/ 6 | | | 1/ 6 |
| Acetilactobacillus |
| | | | 1/ 1 |
| Ligilactobacillus |
| | | | 5/ 10 |
| Loigolactobacillus |
| | | | 2/ 2 |
| Paucilactobacillus |
| 1/ 3 | | | 1/ 3 |
| Apilactobacillus |
| | | | 1/ 4 |
| Secundilactobacillus |
| | | | 2/ 2 |
| Pediococcus |
| | | | 3/ 6 |
| Furfurilactobacillus |
| 1/ 1 | | | 1/ 1 |
| Companilactobacillus |
| 2/ 9 | | | 4/ 9 |
| Amylolactobacillus |
1/ 1 | | | | |
| Schleiferilactobacillus |
| 1/ 1 | | | 1/ 1 |
| Lapidilactobacillus |
| | | | 1/ 1 |
| Oenococcus |
| | | | 3/ 4 |
| Leuconostoc |
| 1/ 15 | | | 7/ 15 |
| Weissella |
| 4/ 15 | | | 3/ 15 |
| Enterococcus |
11/ 35 | 22/ 35 | | | 14/ 35 |
| Tetragenococcus |
2/ 4 | 3/ 4 | | | 1/ 4 |
| Vagococcus |
2/ 11 | 5/ 11 | | | |
| Aerococcus |
3/ 10 | 7/ 10 | 2/ 10 | | 2/ 10 |
| Suicoccus |
1/ 1 | | | | |
| Ignavigranum |
| 1/ 1 | | | |
| Globicatella |
1/ 1 | 1/ 1 | | | |
| Fundicoccus |
| 1/ 1 | | | |
| Facklamia |
1/ 1 | 1/ 1 | | | |
| Carnobacterium |
| 3/ 7 | 1/ 7 | | 4/ 7 |
| Jeotgalibaca |
1/ 6 | 2/ 6 | 1/ 6 | | 1/ 6 |
| Dolosigranulum |
| | | | 1/ 1 |
| Granulicatella |
| 1/ 2 | | | |
| Desemzia |
| 1/ 1 | 1/ 1 | | 1/ 1 |
| Clostridia |
Clostridium |
3/ 75 | 45/ 75 | 3/ 75 | | 18/ 75 |
| Hathewaya |
| 1/ 2 | | | |
| Hungatella |
| | | | 1/ 1 |
| Oceanirhabdus |
| 1/ 1 | | | |
| Proteiniclasticum |
1/ 1 | | | | 1/ 1 |
| Mageeibacillus |
| 1/ 1 | | | |
| Acetivibrio |
1/ 4 | 4/ 4 | | | |
| Ruminiclostridium |
| 1/ 3 | | | 2/ 3 |
| Flavonifractor |
| | | | 1/ 1 |
| Faecalibacterium |
| | | | 2/ 4 |
| Oscillibacter |
| | | | 1/ 1 |
| Vescimonas |
2/ 2 | | | | |
| Anaerotruncus |
| 1/ 1 | | | |
| Lawsonibacter |
| | | | 1/ 1 |
| Petroclostridium |
| 1/ 1 | | | 1/ 1 |
| Paludihabitans |
| | | | 1/ 1 |
| Amygdalobacter |
| 1/ 2 | | | |
| Acutalibacter |
1/ 1 | | | | |
| Agathobaculum |
| | | | 1/ 1 |
| Intestinibacillus |
1/ 1 | | | | |
| Symbiobacterium |
| | | | 1/ 1 |
| Desulfitobacterium |
1/ 5 | 4/ 5 | | | 4/ 5 |
| Syntrophobotulus |
| | | | 1/ 1 |
| Desulfosporosinus |
| 2/ 3 | | | 1/ 3 |
| Dehalobacter |
| | | | 3/ 3 |
| Pelotomaculum |
| 1/ 1 | | | |
| Desulforamulus |
1/ 3 | 1/ 3 | | | 2/ 3 |
| Desulfofarcimen |
| 1/ 1 | | | 1/ 1 |
| Candidatus Formimonas |
| | | | 1/ 1 |
| Eubacterium |
1/ 6 | | | | 3/ 6 |
| Acetobacterium |
| 1/ 2 | | | 1/ 2 |
| Alkalibacter |
| | | | 1/ 1 |
| Alkalicella |
| 1/ 1 | 1/ 1 | | 1/ 1 |
| Thermaerobacter |
| | | | 1/ 4 |
| Intestinimonas |
| | | | 1/ 1 |
| Fenollaria |
1/ 1 | 1/ 1 | | | |
| Proteiniborus |
| | | | 1/ 1 |
| Butyrivibrio |
| 1/ 5 | | | |
| Roseburia |
| | | | 2/ 4 |
| Coprococcus |
| | | | 1/ 4 |
| Blautia |
2/ 13 | 1/ 13 | | | 7/ 13 |
| Lachnoclostridium |
| 2/ 7 | | | 2/ 7 |
| Lacrimispora |
| 1/ 3 | | | 2/ 3 |
| Herbinix |
1/ 1 | | | | |
| Anaerocolumna |
| 1/ 3 | | | 1/ 3 |
| Enterocloster |
| 2/ 3 | | | 2/ 3 |
| Qiania |
| | | | 1/ 1 |
| Agathobacter |
| | | | 1/ 3 |
| Kineothrix |
| | | | 1/ 1 |
| Claveliimonas |
| | | | 1/ 1 |
| Anaerotignum |
| 1/ 3 | | | 1/ 3 |
| Cellulosilyticum |
| 2/ 2 | | | |
| Petrocella |
| | | | 1/ 1 |
| Vallitalea |
1/ 2 | 2/ 2 | | | 1/ 2 |
| Aminipila |
| | | | 1/ 3 |
| Emergencia |
1/ 1 | | | | 1/ 1 |
| Alkaliphilus |
1/ 2 | 2/ 2 | 1/ 2 | | |
| Geosporobacter |
| 1/ 1 | 1/ 1 | | 1/ 1 |
| Paraclostridium |
| 1/ 2 | | | |
| Clostridioides |
3/ 6 | 5/ 6 | | | 5/ 6 |
| Peptacetobacter |
1/ 2 | | | | |
| Intestinibacter |
1/ 1 | | | | |
| Peptoclostridium |
| | | | 1/ 2 |
| Acetoanaerobium |
| 1/ 1 | | | |
| Christensenella |
| | | | 1/ 1 |
| Thermoanaerobacter |
| 2/ 8 | | | |
| Thermoanaerobacterium |
| | | | 4/ 5 |
| Mahella |
| 1/ 1 | | | |
| Halothermothrix |
1/ 1 | | | | |
| Halocella |
1/ 1 | | | | |
| Anoxybacter |
| 1/ 1 | | | |
| Other Bacillota |
Caldicellulosiruptor |
| | | | 1/ 13 |
| Finegoldia |
| 1/ 1 | | | |
| Peptoniphilus |
1/ 5 | 3/ 5 | | | |
| Gottschalkia |
1/ 1 | 1/ 1 | | | |
| Acidilutibacter |
| | | | 1/ 1 |
| Keratinibaculum |
1/ 1 | 1/ 1 | | | |
| Tissierella |
1/ 2 | 2/ 2 | | | 1/ 2 |
| Sedimentibacter |
| | | | 1/ 1 |
| Ezakiella |
1/ 1 | | | | |
| Veillonella |
1/ 7 | | | | |
| Selenomonas |
1/ 7 | | | | |
| Pelosinus |
| 1/ 2 | | | |
| Sporomusa |
| 1/ 2 | 1/ 2 | | 1/ 2 |
| Phascolarctobacterium |
| | | | 1/ 1 |
| Erysipelothrix |
| 2/ 7 | | | 4/ 7 |
| Amedibacterium |
1/ 2 | 1/ 2 | | | 2/ 2 |
| Intestinibaculum |
1/ 1 | | | | 1/ 1 |
| Longicatena |
| | | | 1/ 1 |
| Solobacterium |
1/ 1 | | | | |
| Turicibacter |
1/ 3 | 1/ 3 | | | 1/ 3 |
| Mycoplasmatota |
Acholeplasma |
| | | | 1/ 3 |
| Actinomycetota |
Fannyhessea |
| 1/ 1 | | | |
| Collinsella |
| 1/ 3 | | | 2/ 3 |
| Eggerthella |
1/ 3 | | | | 3/ 3 |
| Adlercreutzia |
| | | | 2/ 2 |
| Denitrobacterium |
| | | | 1/ 1 |
| Berryella |
| | | | 1/ 2 |
| Raoultibacter |
| | | | 1/ 1 |
| Egibacter |
1/ 1 | | | | |
| Euzebya |
1/ 1 | | | | |
| Mycobacterium |
40/106 | | 1/106 | | |
| Mycolicibacterium |
11/ 59 | | 1/ 59 | | |
| Mycolicibacillus |
2/ 2 | | | | |
| Mycobacteroides |
2/ 10 | | | | |
| Mycolicibacter |
| | 1/ 6 | | |
| Corynebacterium |
24/168 | | 5/168 | | 17/168 |
| Nocardia |
16/ 23 | | | | |
| Rhodococcus |
4/ 38 | | | | |
| Gordonia |
1/ 20 | | | | |
| Tsukamurella |
3/ 4 | | | | |
| Dietzia |
4/ 7 | | | | |
| Tomitella |
1/ 1 | | | | |
| Streptomyces |
52/271 | | 8/271 | | 8/271 |
| Kitasatospora |
| | 1/ 8 | | 1/ 8 |
| Tropheryma |
| | 2/ 2 | | |
| Luteimicrobium |
| | 1/ 1 | | 1/ 1 |
| Pengzhenrongella |
| | 1/ 1 | | |
| Leifsonia |
| | 4/ 4 | | |
| Clavibacter |
| | 8/ 8 | | 8/ 8 |
| Microbacterium |
12/ 42 | | 16/ 42 | | |
| Rhodoluna |
| | 2/ 3 | | 3/ 3 |
| Aquiluna |
| | 1/ 2 | | 2/ 2 |
| Rathayibacter |
| | 8/ 8 | | |
| Curtobacterium |
| | 5/ 5 | | |
| Frondihabitans |
| | 2/ 2 | | |
| Agromyces |
3/ 9 | | 1/ 9 | | |
| Cryobacterium |
| | 2/ 2 | | |
| Cnuibacter |
1/ 1 | | 1/ 1 | | 1/ 1 |
| Aurantimicrobium |
| | 3/ 4 | | |
| Pontimonas |
| | 1/ 1 | | |
| Microcella |
2/ 4 | | 2/ 4 | | |
| Mycetocola |
| | 1/ 2 | | 1/ 2 |
| Salinibacterium |
| | 2/ 3 | | 2/ 3 |
| Humibacter |
| | 2/ 2 | | 2/ 2 |
| Gryllotalpicola |
| | 1/ 1 | | |
| Protaetiibacter |
| | 2/ 3 | | 2/ 3 |
| Plantibacter |
| | 1/ 1 | | 1/ 1 |
| Leucobacter |
5/ 11 | | 5/ 11 | | |
| Agrococcus |
2/ 2 | | 1/ 2 | | |
| Marisediminicola |
| | 1/ 1 | | |
| Herbiconiux |
| | 1/ 2 | | 1/ 2 |
| Frigoribacterium |
| | 1/ 1 | | |
| Glaciihabitans |
| | 1/ 1 | | |
| Agreia |
| | 1/ 1 | | |
| Subtercola |
| | 2/ 2 | | |
| Gulosibacter |
1/ 2 | | | | |
| Antiquaquibacter |
1/ 1 | | | | |
| Arthrobacter |
2/ 39 | | 24/ 39 | | 1/ 39 |
| Psychromicrobium |
1/ 1 | | 1/ 1 | | |
| Paenarthrobacter |
| | 3/ 5 | | |
| Pseudarthrobacter |
| | 6/ 8 | | |
| Glutamicibacter |
2/ 8 | | 4/ 8 | | |
| Renibacterium |
| | 1/ 1 | | |
| Kocuria |
| | 6/ 7 | | |
| Micrococcus |
3/ 8 | | 3/ 8 | | |
| Rothia |
| | 6/ 6 | | |
| Sinomonas |
| | 1/ 2 | | |
| Neomicrococcus |
1/ 1 | | 1/ 1 | | |
| Auritidibacter |
2/ 2 | | 1/ 2 | | |
| Citricoccus |
| | 1/ 2 | | |
| Pseudoglutamicibacter |
1/ 1 | | | | |
| Beutenbergia |
1/ 1 | | 1/ 1 | | 1/ 1 |
| Brachybacterium |
4/ 11 | | 7/ 11 | | |
| Dermabacter |
2/ 3 | | 2/ 3 | | |
| Helcobacillus |
1/ 1 | | | | 1/ 1 |
| Jonesia |
| | 1/ 1 | | |
| Kytococcus |
1/ 1 | | 1/ 1 | | |
| Dermacoccus |
| | 1/ 3 | | |
| Luteipulveratus |
1/ 1 | | | | 1/ 1 |
| Yimella |
| | 1/ 1 | | |
| Barrientosiimonas |
1/ 1 | | | | |
| Xylanimonas |
| | 2/ 3 | | 2/ 3 |
| Isoptericola |
| | 2/ 2 | | 1/ 2 |
| Cellulosimicrobium |
2/ 3 | | 3/ 3 | | 3/ 3 |
| Sanguibacter |
| | 2/ 2 | | |
| Cellulomonas |
| | 11/ 16 | | 12/ 16 |
| Oerskovia |
1/ 1 | | 1/ 1 | | 1/ 1 |
| Pseudactinotalea |
| | 1/ 1 | | |
| Paraoerskovia |
| | 1/ 1 | | |
| Intrasporangium |
| | 1/ 1 | | |
| Janibacter |
| | 4/ 6 | | |
| Phycicoccus |
| | 1/ 2 | | |
| Ornithinimicrobium |
| | 2/ 6 | | |
| Brevibacterium |
4/ 6 | | 6/ 6 | | 1/ 6 |
| Dermatophilus |
| | 1/ 1 | | |
| Austwickia |
| | 1/ 1 | | |
| Georgenia |
1/ 2 | | 2/ 2 | | 1/ 2 |
| Ruania |
3/ 3 | | 1/ 3 | | |
| Arachnia |
2/ 2 | | | | |
| Acidipropionibacterium |
2/ 4 | | | | |
| Microlunatus |
3/ 3 | | 1/ 3 | | 1/ 3 |
| Tessaracoccus |
1/ 7 | | | | 1/ 7 |
| Propioniciclava |
1/ 3 | | | | |
| Propionimicrobium |
1/ 1 | | | | |
| Nocardioides |
3/ 23 | | 1/ 23 | | |
| Pimelobacter |
1/ 2 | | | | |
| Aeromicrobium |
1/ 7 | | | | |
| Mumia |
1/ 1 | | | | |
| Solicola |
1/ 1 | | | | |
| Kribbella |
3/ 4 | | | | |
| Thermobifida |
2/ 3 | | | | |
| Nocardiopsis |
7/ 8 | | 4/ 8 | | |
| Streptomonospora |
1/ 2 | | | | |
| Spiractinospora |
1/ 1 | | 1/ 1 | | |
| Thermomonospora |
1/ 1 | | | | |
| Actinomadura |
2/ 6 | | | | |
| Actinoallomurus |
1/ 1 | | | | |
| Streptosporangium |
1/ 2 | | | | |
| Nonomuraea |
5/ 5 | | | | 1/ 5 |
| Thermobispora |
1/ 1 | | | | |
| Microbispora |
1/ 1 | | | | |
| Nakamurella |
| | 1/ 3 | | |
| Kineococcus |
| | 1/ 1 | | |
| Saccharopolyspora |
3/ 4 | | 1/ 4 | | |
| Saccharomonospora |
2/ 2 | | | | |
| Amycolatopsis |
8/ 22 | | | | |
| Pseudonocardia |
5/ 10 | | | | |
| Kutzneria |
1/ 3 | | 1/ 3 | | |
| Kibdelosporangium |
1/ 1 | | | | |
| Actinoalloteichus |
5/ 5 | | | | |
| Prauserella |
1/ 1 | | | | |
| Allosaccharopolyspora |
1/ 1 | | | | |
| Actinokineospora |
1/ 1 | | | | |
| Salinispora |
2/ 2 | | | | |
| Micromonospora |
10/ 21 | | | | 1/ 21 |
| Actinoplanes |
3/ 10 | | | | |
| Plantactinospora |
3/ 3 | | | | |
| Phytohabitans |
2/ 2 | | | | |
| Actinocatenispora |
2/ 2 | | | | |
| Polymorphospora |
1/ 1 | | | | |
| Dactylosporangium |
4/ 6 | | | | |
| Natronosporangium |
1/ 1 | | | | |
| Couchioplanes |
1/ 1 | | | | |
| Catenulispora |
1/ 1 | | | | |
| Stackebrandtia |
1/ 1 | | | | |
| Natronoglycomyces |
1/ 1 | | | | |
| Glycomyces |
1/ 1 | | | | |
| Arcanobacterium |
| | 4/ 6 | | |
| Mobiluncus |
| | 1/ 1 | | |
| Trueperella |
2/ 6 | | 3/ 6 | | |
| Actinotignum |
1/ 3 | | 1/ 3 | | |
| Actinobaculum |
| | 1/ 1 | | |
| Schaalia |
1/ 3 | | 2/ 3 | | 2/ 3 |
| Actinomyces |
| | 12/ 22 | | 2/ 22 |
| Boudabousia |
| | 1/ 1 | | |
| Flaviflexus |
1/ 2 | | 2/ 2 | | |
| Nanchangia |
| | 1/ 1 | | 1/ 1 |
| Winkia |
1/ 1 | | | | |
| Gleimia |
1/ 2 | | | | |
| Pauljensenia |
| | | | 1/ 1 |
| Bifidobacterium |
2/ 61 | | | | 28/ 61 |
| Gardnerella |
2/ 6 | 1/ 6 | | | 1/ 6 |
| Bombiscardovia |
| | | | 2/ 2 |
| Actinopolyspora |
1/ 2 | | | | |
| Epidermidibacterium |
1/ 1 | | | | |
| Conexibacter |
1/ 1 | | | | |
| Actinomarinicola |
1/ 1 | | | | |
| Iamia |
2/ 2 | | | | |
| Dermatobacter |
1/ 1 | | | | |
| Cyanobacteriota |
Chamaesiphon |
| | 1/ 1 | | |
| Oscillatoria |
| | 1/ 3 | | |
| Nostoc |
| | 2/ 11 | | |
| Scytonema |
| | 1/ 1 | | |
| Brasilonema |
| | 2/ 2 | | |
| Chloroflexota |
Herpetosiphon |
| | | | 1/ 1 |
| Pelolinea |
| | | | 1/ 1 |
| Candidatus Promineifilum |
| | | | 1/ 1 |
| Ktedonosporobacter |
| | | | 1/ 1 |
| Thermobaculum |
1/ 1 | | | | |
| Deinococcota |
Deinococcus |
| | 2/ 23 | | 5/ 23 |
| Verrucomicrobiota |
Ereboglobus |
| | | | 1/ 1 |
| Planctomycetota |
Singulisphaera |
| | 1/ 1 | | |
| Paludisphaera |
| | 1/ 1 | | |
| Spirochaetota |
Treponema |
| 1/ 29 | | | 4/ 29 |
| Spirochaeta |
| | 1/ 3 | | |
| Entomospira |
| 1/ 1 | | | |
| Sphaerochaeta |
| | | | 3/ 3 |
| Parasphaerochaeta |
| | | | 1/ 1 |
| Breznakiella |
| | | | 1/ 1 |
| Leptospira |
| | | | 2/ 16 |
| Fusobacteriota |
Fusobacterium |
1/ 18 | | | | 1/ 18 |
| Pseudoleptotrichia |
| | | | 1/ 1 |
| Synergistota |
Cloacibacillus |
| | | | 1/ 1 |
| Gemmatimonadota |
Gemmatimonas |
| | | | 2/ 3 |
| Bacteroidota |
Bacteroides |
5/ 26 | 1/ 26 | | | 12/ 26 |
| Phocaeicola |
2/ 6 | | | | |
| Fermentimonas |
1/ 1 | | | | 1/ 1 |
| Petrimonas |
2/ 2 | | | | |
| Proteiniphilum |
1/ 2 | | | | 1/ 2 |
| Dysgonomonas |
| | | | 2/ 2 |
| Parabacteroides |
1/ 6 | | | | 5/ 6 |
| Duncaniella |
| | | | 2/ 3 |
| Barnesiella |
1/ 1 | | | | 1/ 1 |
| Coprobacter |
1/ 2 | | | | |
| Odoribacter |
| | | | 1/ 1 |
| Butyricimonas |
2/ 3 | | | | 2/ 3 |
| Paraprevotella |
1/ 1 | | | | |
| Alistipes |
2/ 10 | | | | 5/ 10 |
| Draconibacterium |
| | 1/ 2 | | 1/ 2 |
| Xiashengella |
| | | | 1/ 1 |
| Pseudopedobacter |
1/ 1 | | | | 1/ 1 |
| Sphingobacterium |
1/ 16 | | 2/ 16 | | 11/ 16 |
| Anseongella |
| | | | 1/ 1 |
| Olivibacter |
| | | | 1/ 1 |
| Cytophaga |
| | | | 1/ 1 |
| Leadbetterella |
| | | | 1/ 1 |
| Hymenobacter |
| | | | 1/ 24 |
| Adhaeribacter |
| | 1/ 2 | | |
| Flavobacterium |
| | | | 1/ 51 |
| Myroides |
1/ 7 | | | | |
| Oceanihabitans |
1/ 1 | | | | |
| Riemerella |
1/ 8 | | | | |
| Elizabethkingia |
| | | | 6/ 12 |
| Chryseobacterium |
| | | | 1/ 38 |
| Cloacibacterium |
1/ 1 | | | | |
| Empedobacter |
| | 1/ 3 | | 2/ 3 |
| Bergeyella |
1/ 2 | | | | |
| Parvicella |
1/ 1 | | | | |
| Thermotogota |
Thermotoga |
13/ 13 | | | | |
| Pseudothermotoga |
3/ 3 | | | | |
| Thermosipho |
5/ 5 | | | | |
| Fervidobacterium |
3/ 4 | | | | |
| Tepiditoga |
1/ 1 | | | | |
| Marinitoga |
3/ 3 | | | | |
| Defluviitoga |
1/ 1 | | | | |
| Athalassotoga |
1/ 1 | | | | |
| unclassified Bacteria |
Candidatus Saccharimonas |
1/ 1 | | | | |
| Archaea |
Euryarchaeota |
Pyrococcus |
| | | | 1/ 8 |
| Thermococcus |
| | | | 2/ 32 |
| Methanimicrococcus |
| | | | 2/ 2 |
| Candidatus Thermoplasmatota |
Ferroplasma |
| | | | 2/ 2 |
| Thermoproteota |
Metallosphaera |
| | | | 1/ 7 |
| Acidianus |
| | | | 2/ 9 |
| Candidatus Lokiarchaeota |
Candidatus Lokiarchaeum |
| | | | 2/ 2 |
| Candidatus Prometheoarchaeum |
| | | | 1/ 1 |