Lotus japonicus: Lj2g3v1155670.1
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Entry
Lj2g3v1155670.1 CDS
T04348
Symbol
Lj2g3v1155670.1
Name
(Kazusa) -
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lja
Lotus japonicus
Pathway
lja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Lj2g3v1155670.1 (Lj2g3v1155670.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lja01009
]
Lj2g3v1155670.1 (Lj2g3v1155670.1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
Lj2g3v1155670.1 (Lj2g3v1155670.1)
03036 Chromosome and associated proteins [BR:
lja03036
]
Lj2g3v1155670.1 (Lj2g3v1155670.1)
Protein phosphatases and associated proteins [BR:
lja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
Lj2g3v1155670.1 (Lj2g3v1155670.1)
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
Lj2g3v1155670.1 (Lj2g3v1155670.1)
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
Lj2g3v1155670.1 (Lj2g3v1155670.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
PDS5
Htt_N-HEAT_1
Vac14_Fab1_bd
Adaptin_N
Cnd1
CLASP_N
Motif
LinkDB
All DBs
AA seq
552 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARALGEERTRKELIPFLGENNDDD
DEVLLAMAEELGVFIPFVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGPQMRES
DLVEYFIPLVKRLAAGEWFTARVSACGLVHIVYPSAPEMSKTELRSIYSQLCQDDMPMVR
RSAASNLGKFAATVEYAHLKADIMSIFEDLTKDDQDSVRLLAVEGCAALGKLLEPQDCIT
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPDLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLLDKVHSIREAAANNLKRLAEEFGPEWAMQHIIPQV
LEMISNPHYLYRMTVLYAISLLAPVMGYEITSSKLLPVVDAASKDRVPNIKFNVAKVLES
IFPIVDQPVVEK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggttgatgagccactatatccaatagcagtgcttatagacgagctgaaaaac
gatgacatccagctgcggttgaactcaattcgcaagctatccacgattgctcgtgcgctt
ggggaggagcgaactcgtaaggagttgataccgtttttgggtgagaataatgatgatgat
gacgaggtgcttcttgcaatggcggaagagttgggggttttcattccgtttgttggggga
gtggagcatgcccacgtgttgctcccgcctttggagacgctttgcactgttgaggaaacg
tgtgtgagggataaagctgtggaatcactttgtcgaattggacctcagatgagggagagt
gatttggttgagtatttcattcctctggtcaagagattggcagcaggtgaatggttcact
gcccgagtgtctgcatgtggactagttcatattgtttacccaagtgcaccagaaatgtca
aagacagagttgagatcaatatacagtcagctgtgtcaagatgacatgccaatggttaga
aggtctgctgcatcaaatcttgggaagtttgctgcaactgttgaatatgctcatttgaag
gcagacatcatgtcaatttttgaggatcttactaaggatgatcaagactccgttagattg
ttggctgtggagggttgtgctgctcttggcaagctgttggagccacaagactgtatcact
cacatacttccagtgatcgttaacttctcgcaggataagtcttggcgtgtgcgatatatg
gttgcaaatcaattgtatgagctctgcgaagctgttggccctgaacctaccagaacggaa
ttggtccctgcttatgtgcggttgcttcgagacaatgaggctgaagtacggattgcagct
gcagggaaagtgacaaagttttgccggattttaaatccagatcttgcaattcagcatatt
cttccttgtgtgaaggaattgtcatctgattcttcgcagcatgttcgctctgctctggca
tcagtaataatgggaatggctccagtattaggaaaggatgcaacaattgagcagcttctt
cctattttcctttcccttttgaaggatgaatttcctgatgtgcgcctaaacatcataagc
aagcttgatcaagtgaatcaggttattggaatcgatttgttatctcaatctttactacca
gccattgttgagcttgctgaggacaggcattggagggttcggcttgcaatcatagagtat
atacccttattggcaagccaattgggggttgggttttttgacgataagcttggtgctctt
tgcatgcagtggttactggacaaggttcattcaattcgtgaggcagctgctaacaacttg
aagcgcctggcagaagaatttggtcctgaatgggctatgcagcacataattccacaggtt
ttggagatgattagcaatccacactatttgtatcggatgaccgttctttatgctatctct
ttgcttgctcctgtcatgggctatgaaatcacaagctcaaaattattgcctgttgttgat
gctgcatcaaaagacagagtacccaatattaagttcaacgtggcaaaggtcttggagtcc
atcttccccatagttgatcaacccgttgtggaaaag
DBGET
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