DBGET LinkDB KEGG2

DBGET is an integrated database retrieval system for major biological databases at GenomeNet. It is also used in KEGG as the backbone retrieval system. DBGET is based on a flat-file view of molecular biology databases, where the database is considered as a collection of entries. Thus, each entry of each database can be retrieved by the combination of the database name and the entry name (see the history of development).
DBGET at GenomeNet

KEGG Databases in DBGET

Database name Abbre-
viation		 Content Webpage
kegg pathway path KEGG pathway maps KEGG PATHWAY
brite br Brite functional hierarchies KEGG BRITE
module md KEGG modules KEGG MODULE
orthology ko KO groups of functional orthologs KEGG ORTHOLOGY
genes Organisms org
code		 Genes in KEGG organisms KEGG GENES
Viruses vg Genes in viruses category
Vpept vp Mature peptides in viruses
Addendum ag Genes in addendum category
genomes genome gn KEGG organisms and selected viruses KEGG Organism
mgenome mgnm Metagenomes KEGG Metagenomes
mgenes     Gene catalogs in metagenomes
ligand compound cpd Chemical compounds KEGG COMPOUND
glycan gl Glycans KEGG GLYCAN
reaction rn Chemical Reactions KEGG REACTION
rclass rc Reaction class
enzyme ec Enzyme nomenclature KEGG Enzyme
network ne Network elements KEGG NETWORK
variant hsa_var Human gene variants
disease ds Human diseases KEGG DISEASE
drug dr Drugs KEGG DRUG
dgroup dg Drug groups

mgenome and megenes are served by GenomeNet

Last updated: May 21, 2021
KEGG GenomeNet