Number of references (2024/4/19)
total | 72,139 |
pathway | 6,633 |
brite | 443 |
module | 1,100 |
ko | 28,497 |
genome | 6,746 |
agenes | 3,050 |
glycan | 931 |
reaction | 2,061 |
enzyme | 16,115 |
network | 2,640 |
variant | 1,980 |
disease | 10,878 |
Data-oriented entry points
KEGG databases
Category | Entry point | Database | Content | Classification |
Systems information |
KEGG PATHWAY | PATHWAY | KEGG pathway maps | Pathway maps |
KEGG BRITE | BRITE | BRITE hierarchies and tables | Brite hierarchies Brite tables |
|
KEGG MODULE KEGG RModule |
MODULE | KEGG modules and reaction modules | Modules Reaction modules |
|
Genomic information |
KEGG ORTHOLOGY | KO | Functional orthologs | KO |
KEGG GENES KEGG SeqData |
GENES | Genes and proteins | ||
KEGG GENOME KEGG Virus |
GENOME | Genomes of cellular organisms and viruses | Organisms Viruses |
|
Chemical information |
KEGG COMPOUND | COMPOUND | Metabolites and other small molecules | Compounds |
KEGG GLYCAN | GLYCAN | Glycans | ||
KEGG REACTION | REACTION RCLASS |
Biochemical reactions Reaction class |
||
KEGG Enzyme | ENZYME | Enzyme nomenclature with sequence data | EC sequence data | |
Health information |
KEGG NETWORK | NETWORK VARIANT |
Disease-related network variations Human gene variants |
Network variation maps |
KEGG DISEASE | DISEASE | Human diseases | Human diseases (ICD) Human diseases Infectious diseases |
|
KEGG DRUG | DRUG DGROUP |
Drugs Drug groups |
Drugs (ATC) Drugs (target) Antiinfectives |
Four types of database navigation bars
MEDICUS extension
Category | Entry point | Database | Content |
Health information |
KEGG MEDICUS | JAPIC | Japanese drug labels |
DailyMed | FDA drug labels (links only) |
GenomeNet extension
Category | Entry point | Database | Content |
Genomic information |
KEGG Metagenomes | MGENES | Genes in metagenomes |
MGENOME | Metagenomes of environmental samples |
Organism-specific entry points
KEGG organisms - list of currently available organisms with organism codes and organism group names
Organism groups and pangenomes
Organism group | Pangenome | Genome | ||
Eukaryotes | Animals Plants Fungi Protists |
Genus level pangenomes |
Species level pangenomes |
KEGG organisms |
Prokaryotes | Bacteria Archaea |
Associated tools and documents
Tool | Content |
DBGET | Integrated database retrieval system |
KEGG Mapper | KEGG mapping tools |
KEGG Web Apps | Javascript-based web applications |
KEGG Syntax | Conserved gene order analysis |
KEGG Annotation | KO assignment and analysis |
BlastKOALA GhostKOALA KofamKOALA |
Automatic KO assignment server |
BLAST FASTA |
Sequence similarity search |
SIMCOMP SUBCOMP |
Chemical structure similarity search |
See more tools at GenomeNet.
Last updated: April 1, 2024