Lotus japonicus: Lj5g3v0279130.2
Help
Entry
Lj5g3v0279130.2 CDS
T04348
Symbol
Lj5g3v0279130.2
Name
(Kazusa) -
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
lja
Lotus japonicus
Pathway
lja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Lj5g3v0279130.2 (Lj5g3v0279130.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
Lj5g3v0279130.2 (Lj5g3v0279130.2)
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Lj5g3v0279130.2 (Lj5g3v0279130.2)
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
Lj5g3v0279130.2 (Lj5g3v0279130.2)
FA (Fanconi anemia) pathway
Downstream FA components
Lj5g3v0279130.2 (Lj5g3v0279130.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Pex19
Motif
LinkDB
All DBs
AA seq
1083 aa
AA seq
DB search
MAVLAARKHYCTNKNILGKENLDEECKLLLKDQAMGCPEFKNAHKVKGHPSLQKGGSNEV
HDIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINPIIRGAMDVDIRGAIVILDE
AHNIEDITRDAGSVDIEEDVLDKLQVELQQLCSSNTAIYQPLYEMTQGLTSWIEQKKNKL
EKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKAIKVATDLETDQPRLSGMSV
ITLEGLFSSLTYFFSRNGSHMLDYQLSLQRCVRKDDRRGFGNWMHTFSLWCLNPAVVFRD
VADLSLSVILTSGTLSPMPSFSSELGVQFETSLEAPHVIDVDSQVWPAIISTGPGNYPLN
ASYKTADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSRLHTEK
SLFVEPRGGSQDDFELVLKGYYDSIHHGKRPALGRKRRIKKIDLNHFYTVDSPQDSKKGG
AALLGVCRGKVSEGIDFSDENARVVIIVGIPFPNINDVQVALKKKYNDTFKSSKNLLSGS
QWYCHQAFRALNQAAGRCIRHSLDYGAIILLDERFREERNRALISKWLRRPLRVYDSFNL
SLEGLKSFFEDAKERFSMNTVHISQNLVFDSDGVQNKEQNTRLKKNQKLNKSVNGREKDT
SMIEDNISIPTLSSHDLAESQLFAQRTSNTYNFEDHINPQCCNLTERLTEKLPVSITHEE
TSVVKETPCIDVGHDAGSPDYSDAYSNCTIIETSAQFPPDHLSSHQMSLSNGSKSSSKVQ
SSITVTPEKNIATTNIPEMDSSLNLSVNSHNQKRRKPFINLIEEENYGAPCATSLTWYSK
SSVAVTEATHGTKPGLERNLKSHSPQIPTSNLPGTCSLTAPLLDKRLQIFCSLCKNPLGR
PENDLFLTCSLISSSKVYLRSLLKQKLKTYTTDTSDSLPVILTDSSCVDQRILNRIPKSA
PEQGIWCLEDGCVFSTVFCPFCSNRNNLLGVQVMATNSSNVQLLEQILFYFDSLVVKNHE
ETGKGASEEEDLLPVIDSGTDEVAVLNSIDRYSYLPQPAKSEVWKIRKSKPRLRSSPYAE
SQS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctggcagcacggaaacattactgcaccaacaaaaatatacttggcaaagag
aaccttgatgaagaatgtaaactactattgaaagatcaggcaatggggtgtccagaattc
aaaaatgctcataaagtcaaaggtcatccatcccttcagaagggaggaagcaatgaggtg
catgacatagaagatcttgtaaaagttggacaagtggtcaaaggttgctcttattatgct
gcgcgttctatgtctgatgatgcacagttggtattttgtccatatagttatataattaat
ccaatcattaggggagctatggatgtggatattagaggagctatcgtgattcttgatgaa
gctcacaatatagaggacatcactcgtgatgctggcagtgtggatattgaagaggatgtc
ttggataaattacaagtggagctccaacaactttgttcttcaaacactgcaatttaccaa
ccgttatatgaaatgacacagggccttactagttggattgaacaaaagaaaaataaacta
gaaaaacgcgattttcagcactacgtgtcgtgttggactggtgataaggctttacgtgag
ctggaagaagcaaatatttcaaagcagtgcttccctatcttgctagaatgtgctaccaag
gcaatcaaagttgctacagacttggagactgatcagccacgtttaagtggcatgtcggtg
ataacactggaaggcttattctcatcactaacttatttcttctcaagaaatggatcacac
atgttagattaccagctttcccttcagcgatgtgttagaaaagatgatagaagaggtttt
ggaaactggatgcatactttcagtttgtggtgcttgaatccagctgttgtttttagagat
gttgctgatctttctttatcagtcatattgacttctgggacactgtcaccaatgccatcc
ttttcttctgagcttggagttcagtttgaaactagtctcgaagctccccatgtaattgac
gttgactcacaggtatggcctgctataatctccactggtcctggtaattatcctttgaat
gcaagttacaaaactgcagacgcatatgaattccaggatgcagttggaagatctttggag
gaaatcttcaagattgttccaggtggatgtcttgtgttctttccaagttataaattgatg
gaaaaattatgtaaccgttggtcagaaacaggtcaatggtctcgattacatacagaaaag
tccctttttgttgaaccaaggggaggaagccaggatgattttgaacttgtcttaaagggg
tattatgactcaattcatcatggcaaaagacctgctttagggaggaaaagaaggattaaa
aaaattgatctaaatcacttctatacagttgattccccacaggattctaaaaaaggagga
gctgctttactaggtgtttgtcgaggaaaggtttctgaaggaattgatttctctgatgag
aacgccagagtagttattatagttggcattccatttcccaatataaatgatgttcaagtt
gcattaaagaagaaatataatgacacattcaaatcatccaaaaatctcttgagtggaagt
cagtggtattgccaccaagcattccgagctttaaatcaagcagcagggcgttgtatacgg
catagtcttgactatggagcaatcatccttttggatgaacgttttcgtgaagaaagaaat
cgagcattaatttcaaagtggctaagaagacccttgagagtgtatgacagctttaatctg
tcattggagggcctaaaatcattctttgaggatgccaaggaacggtttagcatgaataca
gttcatatctcgcagaatttggtctttgacagtgatggtgttcaaaacaaggaacaaaat
acgaggttgaagaaaaatcagaaactgaacaagtctgttaatggacgtgagaaagataca
tcaatgattgaggacaacatctctattcccacactaagcagtcatgatcttgctgagagt
cagctatttgctcaaaggactagtaacacatacaattttgaagatcatatcaatccacaa
tgctgtaatctgacagaaaggttgactgagaaattgccagtgtcaattacacatgaagaa
acctcagttgtcaaggaaaccccatgtatagatgttggtcatgatgctggtagccctgat
tactcggatgcctactctaattgcactataattgagacttctgctcaatttccaccagat
cacttatcaagtcatcagatgtcattatctaatggaagtaaaagttcttcaaaggttcag
tcttcaataacagttacccctgaaaagaatatagctacaactaatattccagaaatggac
tcatctttgaacttgagtgttaattctcacaatcagaaaaggaggaagcccttcataaac
ctcattgaggaagaaaattatggtgcaccttgtgccactagtcttacatggtactcaaaa
agctcagtggctgttacagaggcaactcatggaactaaacctggtttagagagaaatttg
aagtcacattctccacagataccaacaagcaatctacctggtacatgttcattaactgcc
cctctacttgacaaaaggttgcagatattttgttcactctgcaaaaacccattggggcga
cctgagaatgatctgtttcttacatgctctctgatttcatcatcaaaagtttacttaaga
tcccttttgaagcagaaactgaaaacatataccacagatacatcagatagcttaccagtt
attcttactgattcttcttgtgttgatcaacgtattttgaatagaatacctaaaagtgcc
ccggaacagggtatttggtgtttagaagatgggtgtgtcttcagcactgttttctgcccc
ttctgcagtaatagaaacaatttgctaggagttcaagtcatggcaaccaattcatcaaat
gttcagttacttgaacagatattgttttactttgattctttggtagtgaagaaccatgag
gaaacaggaaaaggtgcttcagaggaagaggacttgttgccagttattgactctggcacg
gatgaagttgctgtcttaaattccattgacagatattcttatcttccccaaccggcgaaa
tcagaagtctggaagattagaaaatcaaagccaagactacgaagctcgccttatgcagaa
agccaaagttga
DBGET
integrated database retrieval system
