Musa acuminata (wild Malaysian banana): 103997438
Help
Entry
103997438 CDS
T03447
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mus
Musa acuminata (wild Malaysian banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mus03016
]
103997438
Enzymes [BR:
mus01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
103997438
Transfer RNA biogenesis [BR:
mus03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
103997438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
DUF6447
Motif
Other DBs
NCBI-GeneID:
103997438
NCBI-ProteinID:
XP_009416924
UniProt:
A0A804KHA7
LinkDB
All DBs
Position
9:5522090..5527225
Genome browser
AA seq
616 aa
AA seq
DB search
MEDIEDLVGAGAPPGLRLPVTAVGIKPKRKPKARLVRDPVDPGPQVPGTQTIYVKTFGCS
HNQSDSEYMAGQLSAFGYAVTEDPQQADLWLINTCTVKSPSQSAMTTLISKCKTAKKPLV
VAGCVPQGSRDLKELEGISIIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPSLDLPKVRK
NKFIEILPINVGCLGACTYCKTKHARGHLGSYMVESLVERVRTVISEGVKEIWLSSEDTG
AYGRDIGTNLPLLLNAIIAELPPDRSTMLRIGMTNPPYILEHLKDIAKVLCHPCVYSFLH
VPVQSGSDSVLTAMNREYNVNEFRKVVDTLKELVPGMQIATDIICGFPGETDEDFAQTVS
LIKEYQFAQVHISQFYPRPGTPAARLKKVPSTVVKNRSRELTTVFESFSPYQGMEGQIVR
IWITEIATDGIHLVGHTKGYIQVLVVAPESMLGTSVNSKITSVGRWSAFGEVIDTPAMVN
KGTHPENPKVGSSLHSNSCNSCECSRDPEPCQCRLPESCVQQTCTASHVDPIDIVMDRNH
TGRNFIGSIQSLLVRKRSCGPEKKSEGNTFKSSNDHQTEGTRRKLVAVDYMLLSGMALSF
LTSVVLLILISSKMMS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaggatatagaggacttggtgggcgccggagctccgcccgggctccgccttcctgta
accgccgtcggcatcaaacctaagaggaagccgaaagctcgcctcgtgcgtgaccccgtc
gaccccggcccgcaggttccgggcacacagacgatatatgtgaagacgttcgggtgttcg
cacaatcagagcgacagtgaatatatggctggtcagctatccgcctttggctatgcagtg
accgaggacccccagcaggcagacttatggctgattaatacatgcactgtgaagtctcct
agtcagtctgccatgacgactctcatatcaaagtgtaaaactgcaaaaaaacctctggtg
gtggcaggatgtgttcctcagggaagtcgagacctgaaggagcttgaaggcattagcata
atcggagtacaacaaatagatcgtgttgttgaggttgtagaggagacgctcaaaggccat
gaggtgcggcttttaagccggaaaacattgccatcactagaccttcctaaggtgaggaag
aacaagtttattgaaattcttccaataaatgttggatgtttaggtgcttgtacttattgc
aagacaaagcatgctcgtggtcatcttggaagctacatggttgaaagccttgtagaacgt
gtaagaacagttatctctgagggagtcaaggagatctggttgagcagtgaagacactggt
gcatatggtcgggatattggaacaaatcttccacttcttctgaacgctattatcgcagaa
cttcctcctgatagaagtaccatgcttcgcattggcatgactaatccaccttatatactt
gagcatttgaaagacattgctaaagttttgtgtcacccatgtgtatattcgtttttacat
gtacctgttcaatctgggagtgattctgtcctaacagcaatgaatcgtgaatacaatgtc
aatgagttcagaaaagtggttgacactctgaaggaacttgttcctgggatgcaaattgct
accgacataatatgtggattcccaggtgaaactgatgaagattttgcacaaactgtcagt
cttataaaagagtaccagtttgctcaagttcatatatcacagttttatccccgaccagga
acacctgctgcaagattgaagaaagtccccagcacagtggtgaagaatcgcagtcgtgaa
ctaaccactgtttttgagtcattttcaccataccagggaatggaaggtcaaattgtgagg
atatggattaccgaaattgctactgatggaattcatttggtgggccataccaagggatac
atccaagtgcttgtggttgctcccgagagtatgttggggacctcagtcaattcaaagatc
acatctgttggaaggtggtctgcttttggtgaagtaattgacaccccagctatggtaaat
aaaggcacacacccagagaaccctaaagtgggatcttctcttcactccaattcatgcaac
agttgtgagtgctcaagggatcctgaaccctgccagtgtcgtctcccggaatcatgtgtt
cagcaaacctgtaccgccagccatgtagatcctatcgacattgttatggatcgaaatcac
acggggagaaattttattggctcaattcagtctctgctggtgcggaaaagatcatgcgga
ccagagaagaaaagcgagggtaacacatttaagtcatcaaacgaccatcaaacagaagga
accagaagaaaattagttgccgtggattatatgttgctgagtggaatggcacttagcttt
ctcaccagtgtagttttgctaattttgatttcctcaaagatgatgtcctga
DBGET
integrated database retrieval system