+D GENES KO
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KEGG Orthology (KO) - Chryseobacterium sp. JV274
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:chrj00010]
D CHRYMOREF3P_4290 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CHRYMOREF3P_2774 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CHRYMOREF3P_2653 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CHRYMOREF3P_2159 pfkA; ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHRYMOREF3P_0122 pfkB; Putative ATP-dependent 6-phosphofructokinase isozyme 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D CHRYMOREF3P_1676 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CHRYMOREF3P_2939 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CHRYMOREF3P_4324 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CHRYMOREF3P_2160 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHRYMOREF3P_2875 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CHRYMOREF3P_0435 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CHRYMOREF3P_0014 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CHRYMOREF3P_3381 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHRYMOREF3P_2351 pyk; Pyruvate kinase 2 K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CHRYMOREF3P_0043 pdhA; Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CHRYMOREF3P_1990 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CHRYMOREF3P_0044 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CHRYMOREF3P_0806 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_1307 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_1713 adhA; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CHRYMOREF3P_3876 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase (NADPH:quinone reductase); Similar to arginate lyase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D CHRYMOREF3P_2285 yahK; putative oxidoreductase, Zn-dependent and NAD(P)-binding K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CHRYMOREF3P_4856 ald; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0745 aldH; 4,4'-diaponeurosporen-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1489 mdlD; NAD(P)-dependent benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1714 aldB; aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D CHRYMOREF3P_4623 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHRYMOREF3P_0664 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CHRYMOREF3P_1040 gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D CHRYMOREF3P_0182 pckA; Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CHRYMOREF3P_3264 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:chrj00020]
D CHRYMOREF3P_3382 gltA; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D CHRYMOREF3P_2605 Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CHRYMOREF3P_2604 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CHRYMOREF3P_1018 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CHRYMOREF3P_0752 sucA; 2-oxoglutarate decarboxylase, thiamin-requiring K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CHRYMOREF3P_0734 bfmBB; Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHRYMOREF3P_0751 sucB; dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHRYMOREF3P_0806 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_1307 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_1859 sucD; succinyl-CoA synthetase, NAD(P)-binding, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CHRYMOREF3P_2149 sucC; Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CHRYMOREF3P_3871 cat; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CHRYMOREF3P_1791 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHRYMOREF3P_2366 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHRYMOREF3P_1792 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHRYMOREF3P_2365 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHRYMOREF3P_1121 membrane protein of unknown function K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHRYMOREF3P_1790 Succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHRYMOREF3P_2367 Succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHRYMOREF3P_2686 fumB; anaerobic class I fumarate hydratase (fumarase B) K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CHRYMOREF3P_2687 fumC; fumarate hydratase (fumarase C),aerobic Class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CHRYMOREF3P_1784 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CHRYMOREF3P_3727 mqo; putative malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CHRYMOREF3P_0182 pckA; Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CHRYMOREF3P_3264 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CHRYMOREF3P_0043 pdhA; Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CHRYMOREF3P_1990 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CHRYMOREF3P_0044 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:chrj00030]
D CHRYMOREF3P_2653 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CHRYMOREF3P_0894 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CHRYMOREF3P_0893 6-phosphogluconolactonase, eukaryotic type K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D CHRYMOREF3P_0895 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CHRYMOREF3P_4887 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CHRYMOREF3P_3819 Putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CHRYMOREF3P_3820 Putative transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CHRYMOREF3P_0823 tal; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CHRYMOREF3P_2874 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CHRYMOREF3P_2133 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CHRYMOREF3P_1916 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CHRYMOREF3P_0664 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CHRYMOREF3P_3056 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CHRYMOREF3P_1152 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CHRYMOREF3P_1040 gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D CHRYMOREF3P_3733 gdhII; Glucose 1-dehydrogenase 2 K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D CHRYMOREF3P_4418 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CHRYMOREF3P_1153 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D CHRYMOREF3P_2939 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CHRYMOREF3P_1676 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CHRYMOREF3P_2159 pfkA; ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHRYMOREF3P_0122 pfkB; Putative ATP-dependent 6-phosphofructokinase isozyme 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:chrj00040]
D CHRYMOREF3P_1159 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D CHRYMOREF3P_1167 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D CHRYMOREF3P_1172 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D CHRYMOREF3P_1169 kdgF; Pectin degradation protein KdgF K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D CHRYMOREF3P_1156 kduI; 5-keto 4-deoxyuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D CHRYMOREF3P_1154 uxaC; uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D CHRYMOREF3P_1150 uxaB; Altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D CHRYMOREF3P_1149 Altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D CHRYMOREF3P_3250 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CHRYMOREF3P_4887 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CHRYMOREF3P_1144 Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D CHRYMOREF3P_1145 xylA; D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D CHRYMOREF3P_1134 Putative sugar isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D CHRYMOREF3P_0520 Alpha-ketoglutaric semialdehyde dehydrogenase 2 K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00051 Fructose and mannose metabolism [PATH:chrj00051]
D CHRYMOREF3P_1185 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CHRYMOREF3P_3131 Mannose-6-phosphate isomerase type 2 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CHRYMOREF3P_2831 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CHRYMOREF3P_2924 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CHRYMOREF3P_1134 Putative sugar isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D CHRYMOREF3P_2159 pfkA; ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHRYMOREF3P_0122 pfkB; Putative ATP-dependent 6-phosphofructokinase isozyme 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D CHRYMOREF3P_1676 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CHRYMOREF3P_1145 xylA; D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D CHRYMOREF3P_2939 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CHRYMOREF3P_4324 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CHRYMOREF3P_1190 Levanase K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D CHRYMOREF3P_2874 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CHRYMOREF3P_4707 2-deoxyglucose-6-phosphate hydrolase YniC K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
C 00052 Galactose metabolism [PATH:chrj00052]
D CHRYMOREF3P_4597 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHRYMOREF3P_3242 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHRYMOREF3P_0664 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CHRYMOREF3P_4290 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CHRYMOREF3P_2774 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CHRYMOREF3P_3372 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D CHRYMOREF3P_2159 pfkA; ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHRYMOREF3P_0122 pfkB; Putative ATP-dependent 6-phosphofructokinase isozyme 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D CHRYMOREF3P_1186 Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:chrj00053]
D CHRYMOREF3P_3250 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CHRYMOREF3P_4418 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CHRYMOREF3P_2766 Epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CHRYMOREF3P_4856 ald; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0745 aldH; 4,4'-diaponeurosporen-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1489 mdlD; NAD(P)-dependent benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0520 Alpha-ketoglutaric semialdehyde dehydrogenase 2 K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:chrj00500]
D CHRYMOREF3P_1186 Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CHRYMOREF3P_4929 bglX; Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHRYMOREF3P_1079 bglX; Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHRYMOREF3P_1311 Beta-1,3-glucosyltransferase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHRYMOREF3P_1376 Beta-glucosidase BoGH3A K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHRYMOREF3P_1051 Glycosyl hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHRYMOREF3P_0754 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CHRYMOREF3P_3769 Starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CHRYMOREF3P_0756 glgA; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CHRYMOREF3P_0757 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CHRYMOREF3P_3757 Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CHRYMOREF3P_2039 Alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D CHRYMOREF3P_2280 amyA; cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D CHRYMOREF3P_1723 Glycosidase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D CHRYMOREF3P_4568 susB; Glucan 1,4-alpha-glucosidase SusB K21574 susB; glucan 1,4-alpha-glucosidase [EC:3.2.1.3]
D CHRYMOREF3P_3446 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CHRYMOREF3P_2682 T9SS type A sorting domain-containing protein K01214 ISA; isoamylase [EC:3.2.1.68]
D CHRYMOREF3P_2090 treA; Periplasmic trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D CHRYMOREF3P_0664 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CHRYMOREF3P_4290 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CHRYMOREF3P_2774 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CHRYMOREF3P_2653 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CHRYMOREF3P_1185 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:chrj00520]
D CHRYMOREF3P_3459 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CHRYMOREF3P_4435 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CHRYMOREF3P_1185 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CHRYMOREF3P_3771 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CHRYMOREF3P_1883 Glucosamine 6-phosphate synthetase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CHRYMOREF3P_1492 Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D CHRYMOREF3P_3174 Aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D CHRYMOREF3P_3171 Nucleotidyltransferase-like protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D CHRYMOREF3P_2041 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CHRYMOREF3P_2058 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CHRYMOREF3P_1890 Oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D CHRYMOREF3P_4595 degT; Pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CHRYMOREF3P_1892 wbpE; UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CHRYMOREF3P_1891 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-D-glucuronate N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D CHRYMOREF3P_4043 vipB; Vi polysaccharide biosynthesis protein VipB/TviC K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D CHRYMOREF3P_4044 vipA; Vi polysaccharide biosynthesis protein VipA/TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D CHRYMOREF3P_1894 vipA; Vi polysaccharide biosynthesis protein VipA/TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D CHRYMOREF3P_4290 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CHRYMOREF3P_2774 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CHRYMOREF3P_0664 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CHRYMOREF3P_3250 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CHRYMOREF3P_4597 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHRYMOREF3P_3242 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHRYMOREF3P_2766 Epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CHRYMOREF3P_2653 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CHRYMOREF3P_3131 Mannose-6-phosphate isomerase type 2 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CHRYMOREF3P_2831 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CHRYMOREF3P_2924 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CHRYMOREF3P_0754 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:chrj00620]
D CHRYMOREF3P_4623 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHRYMOREF3P_0043 pdhA; Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CHRYMOREF3P_1990 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CHRYMOREF3P_0044 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CHRYMOREF3P_0806 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_1307 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_1713 adhA; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CHRYMOREF3P_3876 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase (NADPH:quinone reductase); Similar to arginate lyase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D CHRYMOREF3P_2285 yahK; putative oxidoreductase, Zn-dependent and NAD(P)-binding K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CHRYMOREF3P_2351 pyk; Pyruvate kinase 2 K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CHRYMOREF3P_2454 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CHRYMOREF3P_2438 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CHRYMOREF3P_2439 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHRYMOREF3P_2938 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CHRYMOREF3P_4856 ald; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0745 aldH; 4,4'-diaponeurosporen-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1489 mdlD; NAD(P)-dependent benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1714 aldB; aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D CHRYMOREF3P_3871 cat; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CHRYMOREF3P_1132 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D CHRYMOREF3P_2716 poxB; Pyruvate dehydrogenase [ubiquinone] K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D CHRYMOREF3P_3674 Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CHRYMOREF3P_3699 Glyoxalase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CHRYMOREF3P_1778 Glyoxalase-like domain K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CHRYMOREF3P_4438 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CHRYMOREF3P_2088 MBL fold hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CHRYMOREF3P_2721 Glyoxylase-like metal-dependent hydrolase (Beta-lactamase superfamily II) K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CHRYMOREF3P_3559 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CHRYMOREF3P_1784 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CHRYMOREF3P_3727 mqo; putative malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CHRYMOREF3P_2686 fumB; anaerobic class I fumarate hydratase (fumarase B) K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CHRYMOREF3P_2687 fumC; fumarate hydratase (fumarase C),aerobic Class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CHRYMOREF3P_4593 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CHRYMOREF3P_0182 pckA; Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CHRYMOREF3P_3264 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CHRYMOREF3P_2029 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D CHRYMOREF3P_0060 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0697 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_3116 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0374 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:chrj00630]
D CHRYMOREF3P_2028 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D CHRYMOREF3P_4623 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHRYMOREF3P_2029 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D CHRYMOREF3P_1784 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CHRYMOREF3P_3382 gltA; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D CHRYMOREF3P_2605 Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CHRYMOREF3P_2604 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CHRYMOREF3P_0060 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0697 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_3116 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_3662 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CHRYMOREF3P_0714 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CHRYMOREF3P_2674 yliK; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CHRYMOREF3P_0418 katE; hydroperoxidase HPII(III) (catalase) K03781 katE; catalase [EC:1.11.1.6]
D CHRYMOREF3P_0925 Catalase K03781 katE; catalase [EC:1.11.1.6]
D CHRYMOREF3P_2590 cat; Catalase K03781 katE; catalase [EC:1.11.1.6]
D CHRYMOREF3P_1046 gyaR; Glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D CHRYMOREF3P_0868 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CHRYMOREF3P_3072 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHRYMOREF3P_1899 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CHRYMOREF3P_0988 gcvP; glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CHRYMOREF3P_4533 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHRYMOREF3P_0184 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHRYMOREF3P_0806 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_1307 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_0183 gcvH; glycine cleavage complex lipoylprotein K02437 gcvH; glycine cleavage system H protein
D CHRYMOREF3P_0185 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CHRYMOREF3P_3562 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CHRYMOREF3P_1152 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:chrj00640]
D CHRYMOREF3P_4623 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHRYMOREF3P_4624 prpE; propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D CHRYMOREF3P_4379 2-oxoisovalerate dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CHRYMOREF3P_0806 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_1307 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_2454 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CHRYMOREF3P_2438 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CHRYMOREF3P_2439 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHRYMOREF3P_2938 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CHRYMOREF3P_3662 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CHRYMOREF3P_0714 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CHRYMOREF3P_2674 yliK; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CHRYMOREF3P_2149 sucC; Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CHRYMOREF3P_1859 sucD; succinyl-CoA synthetase, NAD(P)-binding, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CHRYMOREF3P_4847 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CHRYMOREF3P_4845 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D CHRYMOREF3P_4846 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D CHRYMOREF3P_2604 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CHRYMOREF3P_4844 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D CHRYMOREF3P_4589 yqhD; Alcohol dehydrogenase YqhD K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:chrj00650]
D CHRYMOREF3P_0060 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0697 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_3116 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_1054 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHRYMOREF3P_3505 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHRYMOREF3P_0267 fadN; putative 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CHRYMOREF3P_4851 crt; Short-chain-enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CHRYMOREF3P_2591 Crotonyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CHRYMOREF3P_1791 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHRYMOREF3P_2366 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHRYMOREF3P_1792 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHRYMOREF3P_2365 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHRYMOREF3P_1121 membrane protein of unknown function K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHRYMOREF3P_1790 Succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHRYMOREF3P_2367 Succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHRYMOREF3P_2352 gabD; putative succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CHRYMOREF3P_3871 cat; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CHRYMOREF3P_1718 Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D CHRYMOREF3P_2974 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CHRYMOREF3P_4430 atoD; acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D CHRYMOREF3P_4432 atoA; acetyl-CoA:acetoacetyl-CoA transferase, beta subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D CHRYMOREF3P_4332 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHRYMOREF3P_4333 ACT domain-containing protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:chrj00660]
D CHRYMOREF3P_4332 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHRYMOREF3P_4333 ACT domain-containing protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CHRYMOREF3P_2149 sucC; Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CHRYMOREF3P_1859 sucD; succinyl-CoA synthetase, NAD(P)-binding, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CHRYMOREF3P_0375 leuC; 3-isopropylmalate isomerase subunit, dehydratase component K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CHRYMOREF3P_0376 leuD; 3-isopropylmalate isomerase subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CHRYMOREF3P_0377 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:chrj00562]
D CHRYMOREF3P_2508 Phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D CHRYMOREF3P_2499 Phosphatidylinositol-specific phospholipase C K01771 plc; 1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]
D CHRYMOREF3P_4719 3-phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D CHRYMOREF3P_4847 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CHRYMOREF3P_4324 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:chrj00190]
D CHRYMOREF3P_3651 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CHRYMOREF3P_3650 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CHRYMOREF3P_3649 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CHRYMOREF3P_3648 nuoD; NADH-quinone oxidoreductase subunit D 2 K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CHRYMOREF3P_3647 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CHRYMOREF3P_3646 nuoF; NADH:ubiquinone oxidoreductase, chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CHRYMOREF3P_3644 NADH-ubiquinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CHRYMOREF3P_3643 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CHRYMOREF3P_3642 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CHRYMOREF3P_3641 NADH-ubiquinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CHRYMOREF3P_3640 nuoK; NADH-quinone oxidoreductase subunit K 2 K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CHRYMOREF3P_3639 nqo; NADH-quinone oxidoreductase subunit 12 K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CHRYMOREF3P_3638 NADH-ubiquinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CHRYMOREF3P_2137 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CHRYMOREF3P_1791 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHRYMOREF3P_2366 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHRYMOREF3P_1792 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHRYMOREF3P_2365 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHRYMOREF3P_1121 membrane protein of unknown function K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHRYMOREF3P_1790 Succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHRYMOREF3P_2367 Succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHRYMOREF3P_4178 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CHRYMOREF3P_4179 Cytochrome-c oxidase K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CHRYMOREF3P_4175 Cytochrome c oxidase subunit CcoN K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D CHRYMOREF3P_0146 Cytochrome c oxidase subunit CcoN K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D CHRYMOREF3P_2186 Cytochrome c oxidase subunit CcoN K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D CHRYMOREF3P_2627 Cytochrome c oxidase subunit CcoN K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D CHRYMOREF3P_2188 Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CHRYMOREF3P_2629 Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CHRYMOREF3P_4503 putative Cytochrome bd2, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CHRYMOREF3P_4502 cydB; Cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CHRYMOREF3P_4193 Cytochrome c K08738 CYC; cytochrome c
D CHRYMOREF3P_4498 Cytochrome C K08738 CYC; cytochrome c
D CHRYMOREF3P_4780 Cytochrome C K08738 CYC; cytochrome c
D CHRYMOREF3P_0720 atpA; F1 sector of membrane-bound ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CHRYMOREF3P_0651 atpD; F1 sector of membrane-bound ATP synthase, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CHRYMOREF3P_0719 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CHRYMOREF3P_0721 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CHRYMOREF3P_0650 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CHRYMOREF3P_0724 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CHRYMOREF3P_0722 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CHRYMOREF3P_0723 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CHRYMOREF3P_0052 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CHRYMOREF3P_0117 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CHRYMOREF3P_1817 ppk; polyphosphate kinase, component of RNA degradosome K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:chrj00710]
D CHRYMOREF3P_2875 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CHRYMOREF3P_2160 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHRYMOREF3P_2939 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CHRYMOREF3P_1676 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CHRYMOREF3P_3819 Putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CHRYMOREF3P_3820 Putative transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CHRYMOREF3P_2874 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CHRYMOREF3P_4324 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CHRYMOREF3P_4887 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CHRYMOREF3P_0823 tal; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CHRYMOREF3P_4593 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CHRYMOREF3P_0182 pckA; Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CHRYMOREF3P_3264 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CHRYMOREF3P_3559 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CHRYMOREF3P_1784 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:chrj00720]
D CHRYMOREF3P_4593 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CHRYMOREF3P_1784 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CHRYMOREF3P_2686 fumB; anaerobic class I fumarate hydratase (fumarase B) K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CHRYMOREF3P_2687 fumC; fumarate hydratase (fumarase C),aerobic Class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CHRYMOREF3P_1791 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHRYMOREF3P_2366 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHRYMOREF3P_1792 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHRYMOREF3P_2365 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHRYMOREF3P_1121 membrane protein of unknown function K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHRYMOREF3P_1790 Succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHRYMOREF3P_2367 Succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHRYMOREF3P_1859 sucD; succinyl-CoA synthetase, NAD(P)-binding, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CHRYMOREF3P_2149 sucC; Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CHRYMOREF3P_0060 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0697 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_3116 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_1018 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CHRYMOREF3P_2605 Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CHRYMOREF3P_2604 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CHRYMOREF3P_2454 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CHRYMOREF3P_2438 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CHRYMOREF3P_2439 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHRYMOREF3P_2938 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CHRYMOREF3P_3662 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CHRYMOREF3P_0714 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CHRYMOREF3P_2674 yliK; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CHRYMOREF3P_2654 folD; Methylenetetrahydrofolate dehydrogenase / Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CHRYMOREF3P_3433 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CHRYMOREF3P_4623 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:chrj00680]
D CHRYMOREF3P_1899 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CHRYMOREF3P_3381 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHRYMOREF3P_4593 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CHRYMOREF3P_1784 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CHRYMOREF3P_2939 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CHRYMOREF3P_1676 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CHRYMOREF3P_2159 pfkA; ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHRYMOREF3P_0122 pfkB; Putative ATP-dependent 6-phosphofructokinase isozyme 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D CHRYMOREF3P_2641 Iron-sulphur-binding reductase K08264 hdrD; heterodisulfide reductase subunit D [EC:1.8.98.1]
D CHRYMOREF3P_4623 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHRYMOREF3P_0435 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CHRYMOREF3P_0014 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CHRYMOREF3P_4537 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHRYMOREF3P_4904 Hydroxypyruvate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHRYMOREF3P_2598 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHRYMOREF3P_4905 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:chrj00910]
D CHRYMOREF3P_4188 putative Nitrite reductase (NO-forming) K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D CHRYMOREF3P_4783 nirK; Nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D CHRYMOREF3P_4195 norB; Nitric oxide reductase subunit B K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D CHRYMOREF3P_4778 Nitric oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D CHRYMOREF3P_3897 Nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CHRYMOREF3P_0968 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CHRYMOREF3P_3022 gdhA; glutamate dehydrogenase, NADP-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CHRYMOREF3P_3072 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHRYMOREF3P_3213 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D CHRYMOREF3P_3216 can; Carbonic anhydrase 2 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:chrj00920]
D CHRYMOREF3P_0529 cysN; sulfate adenylyltransferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CHRYMOREF3P_0528 cysD; sulfate adenylyltransferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CHRYMOREF3P_2429 Bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CHRYMOREF3P_0527 Phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D CHRYMOREF3P_0533 Sulfite reductase (NADPH) flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D CHRYMOREF3P_0534 cysI; sulfite reductase, beta subunit, NAD(P)-binding, heme-binding K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D CHRYMOREF3P_1482 Quinol oxidase K05908 doxDA; thiosulfate dehydrogenase (quinone) [EC:1.8.5.2]
D CHRYMOREF3P_2975 Sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CHRYMOREF3P_0530 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CHRYMOREF3P_3220 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CHRYMOREF3P_0531 cysK; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CHRYMOREF3P_3426 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CHRYMOREF3P_3428 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:chrj00061]
D CHRYMOREF3P_2454 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CHRYMOREF3P_2438 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CHRYMOREF3P_2439 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHRYMOREF3P_2938 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CHRYMOREF3P_1402 Acyl carrier protein K02078 acpP; acyl carrier protein
D CHRYMOREF3P_2347 acpP; acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D CHRYMOREF3P_2550 Acyl carrier protein K02078 acpP; acyl carrier protein
D CHRYMOREF3P_2564 Acyl carrier protein K02078 acpP; acyl carrier protein
D CHRYMOREF3P_3224 Acyl carrier protein K02078 acpP; acyl carrier protein
D CHRYMOREF3P_3262 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CHRYMOREF3P_4515 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHRYMOREF3P_0285 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHRYMOREF3P_1471 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHRYMOREF3P_2538 putative Beta-ketoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHRYMOREF3P_3223 3-oxoacyl-(acyl-carrier-protein) synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHRYMOREF3P_2565 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CHRYMOREF3P_2348 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHRYMOREF3P_3114 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHRYMOREF3P_2551 Beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHRYMOREF3P_4775 Short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_0909 Short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_0911 Uncharacterized oxidoreductase MexAM1_META1p0182 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_2566 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_2887 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_2556 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CHRYMOREF3P_1864 lpxC_fabZ; UDP-3-O-acyl-N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CHRYMOREF3P_0002 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CHRYMOREF3P_4109 2-nitropropane dioxygenase npd K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CHRYMOREF3P_0015 Acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D CHRYMOREF3P_4390 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHRYMOREF3P_1618 Putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:chrj00071]
D CHRYMOREF3P_0060 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0697 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_3116 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0265 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHRYMOREF3P_0267 fadN; putative 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CHRYMOREF3P_4923 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CHRYMOREF3P_2649 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CHRYMOREF3P_4390 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHRYMOREF3P_1618 Putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHRYMOREF3P_1713 adhA; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CHRYMOREF3P_3876 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase (NADPH:quinone reductase); Similar to arginate lyase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D CHRYMOREF3P_4856 ald; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0745 aldH; 4,4'-diaponeurosporen-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1489 mdlD; NAD(P)-dependent benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:chrj00561]
D CHRYMOREF3P_4856 ald; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0745 aldH; 4,4'-diaponeurosporen-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1489 mdlD; NAD(P)-dependent benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_2285 yahK; putative oxidoreductase, Zn-dependent and NAD(P)-binding K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CHRYMOREF3P_3340 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CHRYMOREF3P_3555 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CHRYMOREF3P_1063 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:chrj00564]
D CHRYMOREF3P_3726 Glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CHRYMOREF3P_3341 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CHRYMOREF3P_3555 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CHRYMOREF3P_4598 Glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D CHRYMOREF3P_1063 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CHRYMOREF3P_2508 Phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D CHRYMOREF3P_3958 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CHRYMOREF3P_0317 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CHRYMOREF3P_0396 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CHRYMOREF3P_3149 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CHRYMOREF3P_1994 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CHRYMOREF3P_3150 psd; Phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
C 00565 Ether lipid metabolism
D CHRYMOREF3P_2508 Phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:chrj00600]
D CHRYMOREF3P_4928 Glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D CHRYMOREF3P_4435 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
D CHRYMOREF3P_3431 Linoleoyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
C 00592 alpha-Linolenic acid metabolism [PATH:chrj00592]
D CHRYMOREF3P_0265 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:chrj01040]
D CHRYMOREF3P_0015 Acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D CHRYMOREF3P_1068 Lysophospholipase L1-like esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:chrj00230]
D CHRYMOREF3P_0664 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CHRYMOREF3P_3056 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CHRYMOREF3P_0395 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CHRYMOREF3P_4579 purD; phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CHRYMOREF3P_4577 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CHRYMOREF3P_1070 Phosphoribosylformylglycinamidine synthase, synthetase subunit K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CHRYMOREF3P_4576 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CHRYMOREF3P_1608 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CHRYMOREF3P_1601 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CHRYMOREF3P_0394 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CHRYMOREF3P_1073 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CHRYMOREF3P_4578 purH; fused IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CHRYMOREF3P_3038 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CHRYMOREF3P_3737 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CHRYMOREF3P_2140 5'(3')-deoxyribonucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CHRYMOREF3P_2893 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CHRYMOREF3P_2276 punA; Purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CHRYMOREF3P_3673 deoD; Purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CHRYMOREF3P_4013 hpt; Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CHRYMOREF3P_2488 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CHRYMOREF3P_4882 ndk; multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CHRYMOREF3P_4396 dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CHRYMOREF3P_4580 guaA; GMP synthetase (glutamine aminotransferase) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CHRYMOREF3P_2889 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D CHRYMOREF3P_2102 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CHRYMOREF3P_1909 Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CHRYMOREF3P_1907 Ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CHRYMOREF3P_0969 Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D CHRYMOREF3P_4621 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CHRYMOREF3P_1818 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CHRYMOREF3P_4018 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CHRYMOREF3P_2383 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CHRYMOREF3P_2852 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CHRYMOREF3P_1088 dck; Deoxyadenosine/deoxycytidine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D CHRYMOREF3P_1288 Adenosine kinase K19572 CECR1; adenosine deaminase CECR1 [EC:3.5.4.4]
D CHRYMOREF3P_4012 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CHRYMOREF3P_0529 cysN; sulfate adenylyltransferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CHRYMOREF3P_0528 cysD; sulfate adenylyltransferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CHRYMOREF3P_1461 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CHRYMOREF3P_1462 ureB; Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CHRYMOREF3P_1463 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:chrj00240]
D CHRYMOREF3P_4644 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CHRYMOREF3P_4643 carA; carbamoyl phosphate synthetase small subunit, glutamine amidotransferase K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CHRYMOREF3P_4642 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CHRYMOREF3P_3469 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CHRYMOREF3P_3107 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CHRYMOREF3P_2125 pyrE; Orotate phosphoribosyltransferase K13421 UMPS; uridine monophosphate synthetase [EC:2.4.2.10 4.1.1.23]
D CHRYMOREF3P_0282 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CHRYMOREF3P_4882 ndk; multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CHRYMOREF3P_2866 dTTP/UTP pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CHRYMOREF3P_2200 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CHRYMOREF3P_0280 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CHRYMOREF3P_0716 udk; Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CHRYMOREF3P_3737 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CHRYMOREF3P_2140 5'(3')-deoxyribonucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CHRYMOREF3P_2893 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CHRYMOREF3P_0008 Purine nucleoside phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D CHRYMOREF3P_2033 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CHRYMOREF3P_1755 Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CHRYMOREF3P_1909 Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CHRYMOREF3P_1907 Ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CHRYMOREF3P_1088 dck; Deoxyadenosine/deoxycytidine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D CHRYMOREF3P_2592 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CHRYMOREF3P_2882 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D CHRYMOREF3P_1721 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:chrj00250]
D CHRYMOREF3P_4915 aatA; Aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_0662 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_2056 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_3192 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CHRYMOREF3P_3796 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CHRYMOREF3P_0771 Isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CHRYMOREF3P_3834 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CHRYMOREF3P_2636 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CHRYMOREF3P_2724 Nitrilase family protein K13566 NIT2; omega-amidase [EC:3.5.1.3]
D CHRYMOREF3P_4319 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CHRYMOREF3P_3991 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CHRYMOREF3P_4633 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CHRYMOREF3P_4639 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CHRYMOREF3P_4018 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CHRYMOREF3P_2383 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CHRYMOREF3P_2852 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CHRYMOREF3P_1073 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CHRYMOREF3P_4642 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CHRYMOREF3P_2352 gabD; putative succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CHRYMOREF3P_3022 gdhA; glutamate dehydrogenase, NADP-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CHRYMOREF3P_1465 Delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D CHRYMOREF3P_3072 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHRYMOREF3P_4644 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CHRYMOREF3P_4643 carA; carbamoyl phosphate synthetase small subunit, glutamine amidotransferase K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CHRYMOREF3P_1399 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CHRYMOREF3P_3771 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CHRYMOREF3P_1883 Glucosamine 6-phosphate synthetase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CHRYMOREF3P_0395 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:chrj00260]
D CHRYMOREF3P_1677 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHRYMOREF3P_2110 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CHRYMOREF3P_3427 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CHRYMOREF3P_3179 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CHRYMOREF3P_2111 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CHRYMOREF3P_2112 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CHRYMOREF3P_0598 Low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D CHRYMOREF3P_1899 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CHRYMOREF3P_0435 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CHRYMOREF3P_0014 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CHRYMOREF3P_4537 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHRYMOREF3P_4904 Hydroxypyruvate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHRYMOREF3P_2598 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHRYMOREF3P_4905 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CHRYMOREF3P_4454 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CHRYMOREF3P_4875 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CHRYMOREF3P_0623 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CHRYMOREF3P_0988 gcvP; glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CHRYMOREF3P_4533 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHRYMOREF3P_0184 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHRYMOREF3P_0806 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_1307 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_0183 gcvH; glycine cleavage complex lipoylprotein K02437 gcvH; glycine cleavage system H protein
D CHRYMOREF3P_0185 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CHRYMOREF3P_3562 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CHRYMOREF3P_1994 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CHRYMOREF3P_0622 Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D CHRYMOREF3P_1705 Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D CHRYMOREF3P_1765 metC; Cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D CHRYMOREF3P_4297 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CHRYMOREF3P_4335 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CHRYMOREF3P_0555 ygeA; L-aspartate/glutamate-specific racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CHRYMOREF3P_4486 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CHRYMOREF3P_4487 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CHRYMOREF3P_0461 Diaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:chrj00270]
D CHRYMOREF3P_0530 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CHRYMOREF3P_3220 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CHRYMOREF3P_0531 cysK; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CHRYMOREF3P_1765 metC; Cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D CHRYMOREF3P_1260 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CHRYMOREF3P_0622 Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D CHRYMOREF3P_1705 Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D CHRYMOREF3P_4853 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CHRYMOREF3P_2588 metK; methionine adenosyltransferase 1 K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CHRYMOREF3P_3391 Adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CHRYMOREF3P_3395 speE; Polyamine aminopropyltransferase 1 K00797 speE; spermidine synthase [EC:2.5.1.16]
D CHRYMOREF3P_0456 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CHRYMOREF3P_4374 Cystathionine beta-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D CHRYMOREF3P_4259 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D CHRYMOREF3P_1595 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CHRYMOREF3P_1734 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D CHRYMOREF3P_1677 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHRYMOREF3P_2110 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CHRYMOREF3P_3427 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CHRYMOREF3P_3179 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CHRYMOREF3P_3426 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CHRYMOREF3P_3428 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D CHRYMOREF3P_4329 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHRYMOREF3P_4892 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHRYMOREF3P_4915 aatA; Aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_0662 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_2056 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_2975 Sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CHRYMOREF3P_0555 ygeA; L-aspartate/glutamate-specific racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CHRYMOREF3P_1784 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CHRYMOREF3P_4297 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CHRYMOREF3P_4537 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHRYMOREF3P_4904 Hydroxypyruvate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHRYMOREF3P_2598 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHRYMOREF3P_4905 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:chrj00280]
D CHRYMOREF3P_4329 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHRYMOREF3P_4892 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHRYMOREF3P_4379 2-oxoisovalerate dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CHRYMOREF3P_0806 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_1307 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_0265 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHRYMOREF3P_3662 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CHRYMOREF3P_0714 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CHRYMOREF3P_2674 yliK; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CHRYMOREF3P_4850 NAD-dependent L-serine dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D CHRYMOREF3P_0446 2-hydroxy-3-oxopropionate reductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D CHRYMOREF3P_4847 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CHRYMOREF3P_4856 ald; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0745 aldH; 4,4'-diaponeurosporen-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1489 mdlD; NAD(P)-dependent benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_3569 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D CHRYMOREF3P_2974 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CHRYMOREF3P_4430 atoD; acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D CHRYMOREF3P_4432 atoA; acetyl-CoA:acetoacetyl-CoA transferase, beta subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D CHRYMOREF3P_0060 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0697 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_3116 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_1718 Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:chrj00290]
D CHRYMOREF3P_4335 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CHRYMOREF3P_0375 leuC; 3-isopropylmalate isomerase subunit, dehydratase component K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CHRYMOREF3P_0376 leuD; 3-isopropylmalate isomerase subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CHRYMOREF3P_0377 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CHRYMOREF3P_4332 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHRYMOREF3P_4333 ACT domain-containing protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CHRYMOREF3P_4334 Ketol-acid reductoisomerase (NAD(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CHRYMOREF3P_4331 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CHRYMOREF3P_4329 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHRYMOREF3P_4892 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHRYMOREF3P_0374 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:chrj00300]
D CHRYMOREF3P_1677 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHRYMOREF3P_2110 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CHRYMOREF3P_3427 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CHRYMOREF3P_3179 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CHRYMOREF3P_3739 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CHRYMOREF3P_0424 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CHRYMOREF3P_4024 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CHRYMOREF3P_0342 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CHRYMOREF3P_4635 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CHRYMOREF3P_1983 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CHRYMOREF3P_4601 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CHRYMOREF3P_2717 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CHRYMOREF3P_2791 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CHRYMOREF3P_1587 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CHRYMOREF3P_2881 Alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation [PATH:chrj00310]
D CHRYMOREF3P_0297 Aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D CHRYMOREF3P_0734 bfmBB; Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHRYMOREF3P_0751 sucB; dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHRYMOREF3P_0806 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_1307 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_4923 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CHRYMOREF3P_2649 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CHRYMOREF3P_0060 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0697 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_3116 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0555 ygeA; L-aspartate/glutamate-specific racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CHRYMOREF3P_2352 gabD; putative succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CHRYMOREF3P_1893 lhgD; L-2-hydroxyglutarate dehydrogenase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D CHRYMOREF3P_4856 ald; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0745 aldH; 4,4'-diaponeurosporen-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1489 mdlD; NAD(P)-dependent benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:chrj00220]
D CHRYMOREF3P_4633 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CHRYMOREF3P_4639 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CHRYMOREF3P_0782 Arginase K01476 rocF; arginase [EC:3.5.3.1]
D CHRYMOREF3P_1461 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CHRYMOREF3P_1462 ureB; Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CHRYMOREF3P_1463 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D CHRYMOREF3P_1399 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CHRYMOREF3P_3072 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHRYMOREF3P_4644 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CHRYMOREF3P_4643 carA; carbamoyl phosphate synthetase small subunit, glutamine amidotransferase K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CHRYMOREF3P_3022 gdhA; glutamate dehydrogenase, NADP-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CHRYMOREF3P_4915 aatA; Aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_0662 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_2056 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_4637 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CHRYMOREF3P_4634 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CHRYMOREF3P_4635 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CHRYMOREF3P_1983 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CHRYMOREF3P_4638 Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:chrj00330]
D CHRYMOREF3P_1840 Arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CHRYMOREF3P_1838 Agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D CHRYMOREF3P_4750 Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D CHRYMOREF3P_3395 speE; Polyamine aminopropyltransferase 1 K00797 speE; spermidine synthase [EC:2.5.1.16]
D CHRYMOREF3P_3391 Adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CHRYMOREF3P_4856 ald; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0745 aldH; 4,4'-diaponeurosporen-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1489 mdlD; NAD(P)-dependent benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0782 Arginase K01476 rocF; arginase [EC:3.5.3.1]
D CHRYMOREF3P_2440 Ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D CHRYMOREF3P_2059 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CHRYMOREF3P_0692 L-proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D CHRYMOREF3P_1465 Delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D CHRYMOREF3P_1480 Alpha/beta hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CHRYMOREF3P_1783 Alpha/beta hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CHRYMOREF3P_4915 aatA; Aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_0662 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_2056 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:chrj00340]
D CHRYMOREF3P_0347 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CHRYMOREF3P_0354 hisI; fused phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D CHRYMOREF3P_0352 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CHRYMOREF3P_0351 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CHRYMOREF3P_0353 hisF; imidazole glycerol phosphate synthase, catalytic subunit with HisH K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CHRYMOREF3P_0350 hisB; fused histidinol-phosphatase; imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D CHRYMOREF3P_0349 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHRYMOREF3P_0348 hisD; bifunctional histidinal dehydrogenase and histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CHRYMOREF3P_2567 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CHRYMOREF3P_3576 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CHRYMOREF3P_1043 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D CHRYMOREF3P_2354 hutI; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D CHRYMOREF3P_2353 hutG; Formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D CHRYMOREF3P_4856 ald; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0745 aldH; 4,4'-diaponeurosporen-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1489 mdlD; NAD(P)-dependent benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1264 egtD; L-histidine N(Alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:chrj00350]
D CHRYMOREF3P_4915 aatA; Aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_0662 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_2056 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_0349 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHRYMOREF3P_3867 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CHRYMOREF3P_3872 Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D CHRYMOREF3P_3865 Fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D CHRYMOREF3P_1713 adhA; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CHRYMOREF3P_3876 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase (NADPH:quinone reductase); Similar to arginate lyase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D CHRYMOREF3P_2255 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D CHRYMOREF3P_2352 gabD; putative succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:chrj00360]
D CHRYMOREF3P_2570 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D CHRYMOREF3P_3497 paaK; phenylacetyl-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D CHRYMOREF3P_3508 Phenylacetic acid degradation protein PaaD, thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D CHRYMOREF3P_3499 paaA; putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D CHRYMOREF3P_3500 paaB; putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D CHRYMOREF3P_3501 Phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D CHRYMOREF3P_3503 paaD; putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D CHRYMOREF3P_0273 Phenylacetate-CoA oxygenase/reductase, PaaK subunit K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D CHRYMOREF3P_3498 Phenylacetate-CoA oxygenase/reductase, PaaK subunit K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D CHRYMOREF3P_3504 Enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D CHRYMOREF3P_3513 maoC; fused aldehyde dehydrogenase; enoyl-CoA hydratase K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D CHRYMOREF3P_1054 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHRYMOREF3P_3505 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHRYMOREF3P_4915 aatA; Aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_0662 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_2056 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_0349 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHRYMOREF3P_3867 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CHRYMOREF3P_0522 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CHRYMOREF3P_2036 katG; catalase/hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D CHRYMOREF3P_2786 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
C 00380 Tryptophan metabolism [PATH:chrj00380]
D CHRYMOREF3P_0734 bfmBB; Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHRYMOREF3P_0751 sucB; dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHRYMOREF3P_0806 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_1307 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_4923 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CHRYMOREF3P_2649 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CHRYMOREF3P_0060 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0697 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_3116 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_2738 tnaA; Tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D CHRYMOREF3P_4856 ald; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0745 aldH; 4,4'-diaponeurosporen-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1489 mdlD; NAD(P)-dependent benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0418 katE; hydroperoxidase HPII(III) (catalase) K03781 katE; catalase [EC:1.11.1.6]
D CHRYMOREF3P_0925 Catalase K03781 katE; catalase [EC:1.11.1.6]
D CHRYMOREF3P_2590 cat; Catalase K03781 katE; catalase [EC:1.11.1.6]
D CHRYMOREF3P_2036 katG; catalase/hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:chrj00400]
D CHRYMOREF3P_0402 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CHRYMOREF3P_3266 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CHRYMOREF3P_3765 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CHRYMOREF3P_2497 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CHRYMOREF3P_2121 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CHRYMOREF3P_4494 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CHRYMOREF3P_4493 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CHRYMOREF3P_4492 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CHRYMOREF3P_4490 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CHRYMOREF3P_4491 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CHRYMOREF3P_4486 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CHRYMOREF3P_4487 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CHRYMOREF3P_4880 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D CHRYMOREF3P_4298 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CHRYMOREF3P_4546 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CHRYMOREF3P_4915 aatA; Aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_0662 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_2056 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_0349 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:chrj00410]
D CHRYMOREF3P_1976 panD; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CHRYMOREF3P_4856 ald; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0745 aldH; 4,4'-diaponeurosporen-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1489 mdlD; NAD(P)-dependent benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_3768 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CHRYMOREF3P_4847 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:chrj00430]
D CHRYMOREF3P_4511 ggt; Glutathione hydrolase proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CHRYMOREF3P_4319 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
D CHRYMOREF3P_4257 Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:chrj00450]
D CHRYMOREF3P_1260 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CHRYMOREF3P_4853 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CHRYMOREF3P_1765 metC; Cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D CHRYMOREF3P_4374 Cystathionine beta-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D CHRYMOREF3P_3058 sufS; Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CHRYMOREF3P_3842 Ferredoxin--NADP reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CHRYMOREF3P_4672 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CHRYMOREF3P_0529 cysN; sulfate adenylyltransferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CHRYMOREF3P_0528 cysD; sulfate adenylyltransferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CHRYMOREF3P_4564 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:chrj00460]
D CHRYMOREF3P_4929 bglX; Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHRYMOREF3P_1079 bglX; Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHRYMOREF3P_1311 Beta-1,3-glucosyltransferase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHRYMOREF3P_1376 Beta-glucosidase BoGH3A K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHRYMOREF3P_4511 ggt; Glutathione hydrolase proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CHRYMOREF3P_3796 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CHRYMOREF3P_0771 Isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CHRYMOREF3P_1899 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:chrj00470]
D CHRYMOREF3P_2881 Alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D CHRYMOREF3P_3604 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CHRYMOREF3P_0555 ygeA; L-aspartate/glutamate-specific racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CHRYMOREF3P_1399 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CHRYMOREF3P_3610 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CHRYMOREF3P_2793 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CHRYMOREF3P_4601 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CHRYMOREF3P_2717 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CHRYMOREF3P_0521 4-hydroxyproline 2-epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D CHRYMOREF3P_0519 1-pyrroline-4-hydroxy-2-carboxylate deaminase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D CHRYMOREF3P_0520 Alpha-ketoglutaric semialdehyde dehydrogenase 2 K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D CHRYMOREF3P_0522 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:chrj00480]
D CHRYMOREF3P_4511 ggt; Glutathione hydrolase proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CHRYMOREF3P_0763 Putative glutamate--cysteine ligase 2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D CHRYMOREF3P_0759 Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CHRYMOREF3P_1719 Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CHRYMOREF3P_3845 pepD; Cytosol non-specific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CHRYMOREF3P_1018 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CHRYMOREF3P_0895 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CHRYMOREF3P_0894 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CHRYMOREF3P_0154 putative Peroxiredoxin K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D CHRYMOREF3P_0657 gpo; Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D CHRYMOREF3P_3395 speE; Polyamine aminopropyltransferase 1 K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:chrj00511]
D CHRYMOREF3P_4435 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CHRYMOREF3P_4448 Beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D CHRYMOREF3P_4883 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D CHRYMOREF3P_1312 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D CHRYMOREF3P_1171 Glycoside hydrolase family 95 protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D CHRYMOREF3P_4445 N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
D CHRYMOREF3P_4928 Glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:chrj00540]
D CHRYMOREF3P_1863 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CHRYMOREF3P_1864 lpxC_fabZ; UDP-3-O-acyl-N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CHRYMOREF3P_1860 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CHRYMOREF3P_1865 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CHRYMOREF3P_2020 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CHRYMOREF3P_2370 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CHRYMOREF3P_2275 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CHRYMOREF3P_0812 Uncharacterized phosphosugar isomerase aq_1546 K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CHRYMOREF3P_0617 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CHRYMOREF3P_2865 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CHRYMOREF3P_0659 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CHRYMOREF3P_2413 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CHRYMOREF3P_4145 Lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CHRYMOREF3P_0747 Lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis [PATH:chrj00542]
D CHRYMOREF3P_2528 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:chrj00541]
D CHRYMOREF3P_4597 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHRYMOREF3P_3242 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHRYMOREF3P_3250 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CHRYMOREF3P_2766 Epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CHRYMOREF3P_3248 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHRYMOREF3P_3467 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHRYMOREF3P_3249 rmlB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHRYMOREF3P_1875 rmlC; dTDP-4-deoxyrhamnose-3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CHRYMOREF3P_2519 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CHRYMOREF3P_3131 Mannose-6-phosphate isomerase type 2 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CHRYMOREF3P_2831 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CHRYMOREF3P_2924 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CHRYMOREF3P_4044 vipA; Vi polysaccharide biosynthesis protein VipA/TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D CHRYMOREF3P_1894 vipA; Vi polysaccharide biosynthesis protein VipA/TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D CHRYMOREF3P_1890 Oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D CHRYMOREF3P_4595 degT; Pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CHRYMOREF3P_1892 wbpE; UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CHRYMOREF3P_1891 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-D-glucuronate N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D CHRYMOREF3P_4043 vipB; Vi polysaccharide biosynthesis protein VipB/TviC K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:chrj00550]
D CHRYMOREF3P_2041 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CHRYMOREF3P_2058 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CHRYMOREF3P_2796 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CHRYMOREF3P_2793 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CHRYMOREF3P_2791 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CHRYMOREF3P_3604 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CHRYMOREF3P_1587 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CHRYMOREF3P_2881 Alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D CHRYMOREF3P_2524 ispU; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CHRYMOREF3P_4407 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHRYMOREF3P_4615 Phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHRYMOREF3P_2792 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CHRYMOREF3P_2795 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CHRYMOREF3P_1115 mtgA; Biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CHRYMOREF3P_3051 Monofunctional biosynthetic peptidoglycan transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHRYMOREF3P_3068 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CHRYMOREF3P_2790 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CHRYMOREF3P_4451 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CHRYMOREF3P_0818 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:chrj00552]
D CHRYMOREF3P_4407 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHRYMOREF3P_4615 Phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHRYMOREF3P_2528 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:chrj00543]
D CHRYMOREF3P_2528 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CHRYMOREF3P_0530 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CHRYMOREF3P_3220 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:chrj00730]
D CHRYMOREF3P_2619 thiC; thiamin (pyrimidine moiety) biosynthesis protein K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CHRYMOREF3P_2617 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CHRYMOREF3P_4035 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CHRYMOREF3P_2614 thiH; thiamin biosynthesis ThiGH complex subunit K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CHRYMOREF3P_2615 thiG; thiamin biosynthesis ThiGH complex subunit K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CHRYMOREF3P_2616 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CHRYMOREF3P_2618 Thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CHRYMOREF3P_2963 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CHRYMOREF3P_4881 rsgA; Small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CHRYMOREF3P_0553 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CHRYMOREF3P_2500 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CHRYMOREF3P_1842 Thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D CHRYMOREF3P_4012 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:chrj00740]
D CHRYMOREF3P_3461 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CHRYMOREF3P_2076 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase-2 K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CHRYMOREF3P_3656 5-amino-6-(5-phosphoribosylamino)uracil reductase,Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CHRYMOREF3P_2260 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D CHRYMOREF3P_3036 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CHRYMOREF3P_2434 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CHRYMOREF3P_0652 Riboflavin kinase,FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:chrj00750]
D CHRYMOREF3P_1978 pdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D CHRYMOREF3P_4905 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CHRYMOREF3P_1627 pdxJ; Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CHRYMOREF3P_2112 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:chrj00760]
D CHRYMOREF3P_3192 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CHRYMOREF3P_2103 nadA; Quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CHRYMOREF3P_3191 nadC; putative nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CHRYMOREF3P_3325 pncB; Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CHRYMOREF3P_2276 punA; Purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CHRYMOREF3P_3673 deoD; Purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CHRYMOREF3P_3737 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CHRYMOREF3P_2140 5'(3')-deoxyribonucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CHRYMOREF3P_2893 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CHRYMOREF3P_3404 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CHRYMOREF3P_1759 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CHRYMOREF3P_0419 Competence/damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CHRYMOREF3P_0404 pncA; Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CHRYMOREF3P_2846 cobB; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CHRYMOREF3P_2940 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CHRYMOREF3P_2352 gabD; putative succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:chrj00770]
D CHRYMOREF3P_4332 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHRYMOREF3P_4333 ACT domain-containing protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CHRYMOREF3P_4334 Ketol-acid reductoisomerase (NAD(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CHRYMOREF3P_4331 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CHRYMOREF3P_4759 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CHRYMOREF3P_2623 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CHRYMOREF3P_4701 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CHRYMOREF3P_0135 Ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CHRYMOREF3P_3768 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CHRYMOREF3P_3078 coaX; Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CHRYMOREF3P_2698 coaBC; Phosphopantothenoylcysteine decarboxylase / Phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CHRYMOREF3P_3603 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CHRYMOREF3P_2358 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CHRYMOREF3P_2896 4-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D CHRYMOREF3P_2203 conserved protein of unknown function K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D CHRYMOREF3P_4329 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHRYMOREF3P_4892 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHRYMOREF3P_1976 panD; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CHRYMOREF3P_4856 ald; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0745 aldH; 4,4'-diaponeurosporen-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1489 mdlD; NAD(P)-dependent benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:chrj00780]
D CHRYMOREF3P_2565 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CHRYMOREF3P_2348 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHRYMOREF3P_3114 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHRYMOREF3P_2551 Beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHRYMOREF3P_4775 Short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_0909 Short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_0911 Uncharacterized oxidoreductase MexAM1_META1p0182 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_2566 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_2887 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_2556 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CHRYMOREF3P_0002 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CHRYMOREF3P_0472 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CHRYMOREF3P_0476 bioA; Adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CHRYMOREF3P_0473 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CHRYMOREF3P_0474 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CHRYMOREF3P_3145 BirA family biotin operon repressor/biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:chrj00785]
D CHRYMOREF3P_4485 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CHRYMOREF3P_4073 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CHRYMOREF3P_0806 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_1307 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_0043 pdhA; Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CHRYMOREF3P_1990 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CHRYMOREF3P_0044 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CHRYMOREF3P_0752 sucA; 2-oxoglutarate decarboxylase, thiamin-requiring K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CHRYMOREF3P_0734 bfmBB; Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHRYMOREF3P_0751 sucB; dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHRYMOREF3P_4379 2-oxoisovalerate dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CHRYMOREF3P_0988 gcvP; glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CHRYMOREF3P_4533 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHRYMOREF3P_0184 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHRYMOREF3P_0183 gcvH; glycine cleavage complex lipoylprotein K02437 gcvH; glycine cleavage system H protein
D CHRYMOREF3P_0185 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CHRYMOREF3P_3562 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:chrj00790]
D CHRYMOREF3P_3435 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CHRYMOREF3P_0553 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CHRYMOREF3P_2500 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CHRYMOREF3P_3664 Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CHRYMOREF3P_2113 7,8-dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CHRYMOREF3P_2070 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CHRYMOREF3P_4328 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CHRYMOREF3P_3600 dfrA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CHRYMOREF3P_2921 Dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CHRYMOREF3P_3461 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CHRYMOREF3P_2076 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase-2 K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CHRYMOREF3P_2751 Para-aminobenzoate synthase, aminase component K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D CHRYMOREF3P_2752 Aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CHRYMOREF3P_2021 Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CHRYMOREF3P_2655 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
C 00670 One carbon pool by folate [PATH:chrj00670]
D CHRYMOREF3P_3600 dfrA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CHRYMOREF3P_2654 folD; Methylenetetrahydrofolate dehydrogenase / Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CHRYMOREF3P_1899 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CHRYMOREF3P_4577 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CHRYMOREF3P_4578 purH; fused IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CHRYMOREF3P_2075 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CHRYMOREF3P_4533 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHRYMOREF3P_0184 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHRYMOREF3P_1721 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CHRYMOREF3P_3433 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CHRYMOREF3P_3307 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:chrj00860]
D CHRYMOREF3P_3064 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CHRYMOREF3P_1732 hemL; glutamate-1-semialdehyde aminotransferase (aminomutase) K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CHRYMOREF3P_1854 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CHRYMOREF3P_3063 Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CHRYMOREF3P_3062 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CHRYMOREF3P_3139 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CHRYMOREF3P_3061 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CHRYMOREF3P_4608 hemN; Oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D CHRYMOREF3P_4457 Putative membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D CHRYMOREF3P_2085 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CHRYMOREF3P_0532 Uroporphyrinogen-III methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D CHRYMOREF3P_1843 yvqK; Corrinoid adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CHRYMOREF3P_4280 cobS; Adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CHRYMOREF3P_4278 cobT; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CHRYMOREF3P_4281 Alpha-ribazole-5'-phosphate phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D CHRYMOREF3P_4754 Magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D CHRYMOREF3P_1594 hutZ; Heme oxygenase HutZ K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:chrj00130]
D CHRYMOREF3P_4517 menG; Demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CHRYMOREF3P_1648 Isochorismate synthase siderophore K02361 entC; isochorismate synthase [EC:5.4.4.2]
D CHRYMOREF3P_2753 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CHRYMOREF3P_2178 AMP-dependent synthetase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D CHRYMOREF3P_0675 menB; dihydroxynaphthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D CHRYMOREF3P_1647 1,4-dihydroxy-2-naphthoyl-CoA hydrolase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D CHRYMOREF3P_0674 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CHRYMOREF3P_1962 NAD(P)H dehydrogenase (Quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CHRYMOREF3P_1445 NADPH:quinone reductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CHRYMOREF3P_0421 NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CHRYMOREF3P_3867 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:chrj00900]
D CHRYMOREF3P_0060 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0697 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_3116 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_1718 Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D CHRYMOREF3P_2153 3-hydroxy-3-methylglutaryl coenzyme A reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D CHRYMOREF3P_0694 Mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D CHRYMOREF3P_1617 Diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D CHRYMOREF3P_4535 idi; Isopentenyl-diphosphate Delta-isomerase 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D CHRYMOREF3P_4004 Octaprenyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CHRYMOREF3P_1334 Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CHRYMOREF3P_2524 ispU; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D CHRYMOREF3P_4856 ald; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0745 aldH; 4,4'-diaponeurosporen-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1489 mdlD; NAD(P)-dependent benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:chrj00907]
D CHRYMOREF3P_2974 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CHRYMOREF3P_0265 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CHRYMOREF3P_3819 Putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CHRYMOREF3P_3820 Putative transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis [PATH:chrj00253]
D CHRYMOREF3P_1011 Tetracycline resistance protein K18221 tetX; tetracycline 11a-monooxygenase, tetracycline resistance protein [EC:1.14.13.231]
C 00523 Polyketide sugar unit biosynthesis [PATH:chrj00523]
D CHRYMOREF3P_3248 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHRYMOREF3P_3467 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHRYMOREF3P_3249 rmlB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHRYMOREF3P_1875 rmlC; dTDP-4-deoxyrhamnose-3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CHRYMOREF3P_2519 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D CHRYMOREF3P_1648 Isochorismate synthase siderophore K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D CHRYMOREF3P_3249 rmlB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:chrj00946]
D CHRYMOREF3P_4929 bglX; Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHRYMOREF3P_1079 bglX; Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHRYMOREF3P_1311 Beta-1,3-glucosyltransferase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHRYMOREF3P_1376 Beta-glucosidase BoGH3A K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D CHRYMOREF3P_1052 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CHRYMOREF3P_1297 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:chrj00261]
D CHRYMOREF3P_0529 cysN; sulfate adenylyltransferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CHRYMOREF3P_0528 cysD; sulfate adenylyltransferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CHRYMOREF3P_1677 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHRYMOREF3P_2110 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CHRYMOREF3P_3427 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CHRYMOREF3P_3179 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CHRYMOREF3P_3739 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CHRYMOREF3P_0424 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CHRYMOREF3P_4024 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:chrj00521]
D CHRYMOREF3P_4290 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CHRYMOREF3P_2774 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CHRYMOREF3P_0664 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CHRYMOREF3P_3248 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHRYMOREF3P_3467 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHRYMOREF3P_3249 rmlB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHRYMOREF3P_1875 rmlC; dTDP-4-deoxyrhamnose-3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CHRYMOREF3P_2519 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CHRYMOREF3P_4290 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CHRYMOREF3P_2774 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:chrj00525]
D CHRYMOREF3P_3248 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHRYMOREF3P_3467 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHRYMOREF3P_3249 rmlB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:chrj00401]
D CHRYMOREF3P_4298 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CHRYMOREF3P_4915 aatA; Aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_0662 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_2056 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_0349 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CHRYMOREF3P_4494 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CHRYMOREF3P_4493 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CHRYMOREF3P_3262 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CHRYMOREF3P_4775 Short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_0909 Short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_0911 Uncharacterized oxidoreductase MexAM1_META1p0182 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_2566 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_2887 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_0002 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CHRYMOREF3P_1402 Acyl carrier protein K02078 acpP; acyl carrier protein
D CHRYMOREF3P_2347 acpP; acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D CHRYMOREF3P_2550 Acyl carrier protein K02078 acpP; acyl carrier protein
D CHRYMOREF3P_2564 Acyl carrier protein K02078 acpP; acyl carrier protein
D CHRYMOREF3P_3224 Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:chrj00999]
D CHRYMOREF3P_2588 metK; methionine adenosyltransferase 1 K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CHRYMOREF3P_4929 bglX; Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHRYMOREF3P_1079 bglX; Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHRYMOREF3P_1311 Beta-1,3-glucosyltransferase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHRYMOREF3P_1376 Beta-glucosidase BoGH3A K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:chrj00362]
D CHRYMOREF3P_0265 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHRYMOREF3P_3510 paaE; beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D CHRYMOREF3P_0965 Tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CHRYMOREF3P_0267 fadN; putative 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CHRYMOREF3P_4923 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CHRYMOREF3P_2649 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CHRYMOREF3P_1054 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHRYMOREF3P_3505 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHRYMOREF3P_0060 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0697 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_3116 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:chrj00625]
D CHRYMOREF3P_1713 adhA; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CHRYMOREF3P_3876 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase (NADPH:quinone reductase); Similar to arginate lyase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D CHRYMOREF3P_4856 ald; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_0745 aldH; 4,4'-diaponeurosporen-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_1489 mdlD; NAD(P)-dependent benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CHRYMOREF3P_4669 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D CHRYMOREF3P_4669 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
D CHRYMOREF3P_0965 Tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D CHRYMOREF3P_0265 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:chrj00643]
D CHRYMOREF3P_3872 Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D CHRYMOREF3P_3865 Fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
C 00791 Atrazine degradation
D CHRYMOREF3P_1461 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CHRYMOREF3P_1462 ureB; Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CHRYMOREF3P_1463 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
D CHRYMOREF3P_4418 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D CHRYMOREF3P_0965 Tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:chrj00626]
D CHRYMOREF3P_1713 adhA; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CHRYMOREF3P_3876 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase (NADPH:quinone reductase); Similar to arginate lyase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
D CHRYMOREF3P_3730 choA; Cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:chrj03020]
D CHRYMOREF3P_2299 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CHRYMOREF3P_2298 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CHRYMOREF3P_3369 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:chrj03010]
D CHRYMOREF3P_4421 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CHRYMOREF3P_2466 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CHRYMOREF3P_3349 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CHRYMOREF3P_3368 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CHRYMOREF3P_3360 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CHRYMOREF3P_0737 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CHRYMOREF3P_3328 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CHRYMOREF3P_3357 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CHRYMOREF3P_2467 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CHRYMOREF3P_3330 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CHRYMOREF3P_3367 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CHRYMOREF3P_3327 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CHRYMOREF3P_3366 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CHRYMOREF3P_3356 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CHRYMOREF3P_4264 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CHRYMOREF3P_1941 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CHRYMOREF3P_3352 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CHRYMOREF3P_0738 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CHRYMOREF3P_3347 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CHRYMOREF3P_3297 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CHRYMOREF3P_2323 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CHRYMOREF3P_2305 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CHRYMOREF3P_3346 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CHRYMOREF3P_3343 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CHRYMOREF3P_3344 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CHRYMOREF3P_3355 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CHRYMOREF3P_3358 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CHRYMOREF3P_2303 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CHRYMOREF3P_0739 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CHRYMOREF3P_2304 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CHRYMOREF3P_2306 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CHRYMOREF3P_2468 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CHRYMOREF3P_3353 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CHRYMOREF3P_3362 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CHRYMOREF3P_3350 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CHRYMOREF3P_3370 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CHRYMOREF3P_3359 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CHRYMOREF3P_4427 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CHRYMOREF3P_0359 rplT; 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CHRYMOREF3P_2733 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D CHRYMOREF3P_3348 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CHRYMOREF3P_3345 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CHRYMOREF3P_3354 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CHRYMOREF3P_3057 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CHRYMOREF3P_2732 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CHRYMOREF3P_2063 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CHRYMOREF3P_3351 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CHRYMOREF3P_3361 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CHRYMOREF3P_2494 rpmE; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D CHRYMOREF3P_2437 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CHRYMOREF3P_2064 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CHRYMOREF3P_2430 rpmH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CHRYMOREF3P_0360 rpmI; 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CHRYMOREF3P_3365 rpmJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:chrj00970]
D CHRYMOREF3P_2453 gltX; Glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CHRYMOREF3P_1673 glnS; glutamyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CHRYMOREF3P_4342 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CHRYMOREF3P_2380 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CHRYMOREF3P_1931 asnS; asparaginyl tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CHRYMOREF3P_3105 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CHRYMOREF3P_0371 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CHRYMOREF3P_2634 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CHRYMOREF3P_3437 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CHRYMOREF3P_4564 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CHRYMOREF3P_2075 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CHRYMOREF3P_1919 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CHRYMOREF3P_2408 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CHRYMOREF3P_2573 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CHRYMOREF3P_4500 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CHRYMOREF3P_2192 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CHRYMOREF3P_4364 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CHRYMOREF3P_0779 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CHRYMOREF3P_3840 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CHRYMOREF3P_1057 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CHRYMOREF3P_4070 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHRYMOREF3P_1963 tyrS; Tyrosine--tRNA ligase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHRYMOREF3P_2579 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:chrj03060]
D CHRYMOREF3P_3363 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CHRYMOREF3P_2311 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CHRYMOREF3P_3850 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D CHRYMOREF3P_4610 secD; Protein-export membrane protein SecF,Protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D CHRYMOREF3P_2391 Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D CHRYMOREF3P_2199 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CHRYMOREF3P_2768 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CHRYMOREF3P_1503 Preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CHRYMOREF3P_0726 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CHRYMOREF3P_2067 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CHRYMOREF3P_4614 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CHRYMOREF3P_3464 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CHRYMOREF3P_0813 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CHRYMOREF3P_4025 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CHRYMOREF3P_2577 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:chrj04122]
D CHRYMOREF3P_4035 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CHRYMOREF3P_2975 Sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CHRYMOREF3P_2913 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CHRYMOREF3P_2613 ubaA; SAMP-activating enzyme E1 K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D CHRYMOREF3P_2620 Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:chrj03018]
D CHRYMOREF3P_3381 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHRYMOREF3P_4267 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CHRYMOREF3P_4008 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHRYMOREF3P_4585 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHRYMOREF3P_0405 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHRYMOREF3P_1284 protein of unknown function K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHRYMOREF3P_2873 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CHRYMOREF3P_4001 cshA; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHRYMOREF3P_0811 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CHRYMOREF3P_2074 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CHRYMOREF3P_3160 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CHRYMOREF3P_4521 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CHRYMOREF3P_2159 pfkA; ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHRYMOREF3P_1815 dnaK; chaperone Hsp70, co-chaperone with DnaJ K04043 dnaK; molecular chaperone DnaK
D CHRYMOREF3P_2220 groL; Cpn60 chaperonin GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHRYMOREF3P_1817 ppk; polyphosphate kinase, component of RNA degradosome K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CHRYMOREF3P_1770 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:chrj03030]
D CHRYMOREF3P_0749 dinG; putative ATP-dependent helicase dinG homolog K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_1995 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_2718 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_4381 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHRYMOREF3P_4877 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHRYMOREF3P_1488 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHRYMOREF3P_4671 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHRYMOREF3P_1062 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHRYMOREF3P_3197 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CHRYMOREF3P_4321 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CHRYMOREF3P_0781 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CHRYMOREF3P_3196 rnhA; ribonuclease HI, degrades RNA of DNA-RNA hybrids K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CHRYMOREF3P_2198 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CHRYMOREF3P_3933 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CHRYMOREF3P_3956 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:chrj03410]
D CHRYMOREF3P_2928 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CHRYMOREF3P_1632 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CHRYMOREF3P_4104 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CHRYMOREF3P_0513 Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CHRYMOREF3P_0972 Endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CHRYMOREF3P_0004 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CHRYMOREF3P_1479 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CHRYMOREF3P_0510 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D CHRYMOREF3P_0561 Exodeoxyribonuclease-3 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CHRYMOREF3P_1870 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CHRYMOREF3P_3933 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CHRYMOREF3P_3407 Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CHRYMOREF3P_3956 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:chrj03420]
D CHRYMOREF3P_3206 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CHRYMOREF3P_0255 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CHRYMOREF3P_0685 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CHRYMOREF3P_2745 uvrB; excinulease of nucleotide excision repair, DNA damage recognition component K03702 uvrB; excinuclease ABC subunit B
D CHRYMOREF3P_3574 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CHRYMOREF3P_3854 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHRYMOREF3P_2334 DNA helicase-2/ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHRYMOREF3P_3933 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CHRYMOREF3P_3956 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:chrj03430]
D CHRYMOREF3P_2948 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CHRYMOREF3P_1636 Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D CHRYMOREF3P_2808 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CHRYMOREF3P_3854 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHRYMOREF3P_2334 DNA helicase-2/ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHRYMOREF3P_3407 Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CHRYMOREF3P_0781 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CHRYMOREF3P_4381 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHRYMOREF3P_1062 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHRYMOREF3P_4877 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHRYMOREF3P_4671 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHRYMOREF3P_1488 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHRYMOREF3P_0749 dinG; putative ATP-dependent helicase dinG homolog K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_1995 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_2718 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_3956 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:chrj03440]
D CHRYMOREF3P_3407 Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CHRYMOREF3P_0781 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CHRYMOREF3P_1112 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CHRYMOREF3P_3735 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CHRYMOREF3P_3848 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D CHRYMOREF3P_2167 recA; DNA strand exchange and recombination protein with protease and nuclease activity K03553 recA; recombination protein RecA
D CHRYMOREF3P_3933 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CHRYMOREF3P_3560 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CHRYMOREF3P_2355 ruvB; ATP-dependent DNA helicase, component of RuvABC resolvasome K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CHRYMOREF3P_2482 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CHRYMOREF3P_3743 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CHRYMOREF3P_4381 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHRYMOREF3P_1062 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHRYMOREF3P_4877 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHRYMOREF3P_4671 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHRYMOREF3P_1488 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHRYMOREF3P_0749 dinG; putative ATP-dependent helicase dinG homolog K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_1995 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_2718 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_4450 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:chrj03450]
D CHRYMOREF3P_2385 ku; Non-homologous end joining protein Ku K10979 ku; DNA end-binding protein Ku
D CHRYMOREF3P_2387 ATP-dependent DNA ligase clustered with Ku protein, LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:chrj03250]
D CHRYMOREF3P_4894 Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:chrj02010]
D CHRYMOREF3P_3878 Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC K02002 proX; glycine betaine/proline transport system substrate-binding protein
D CHRYMOREF3P_3879 Glycine betaine ABC transport system, permease protein OpuAB K02001 proW; glycine betaine/proline transport system permease protein
D CHRYMOREF3P_3880 proV; glycine betaine transporter subunit; ATP-binding compoent of ABC superfamily K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D CHRYMOREF3P_1261 yehW; Osmoprotectant uptake system permease protein yehW K05845 opuC; osmoprotectant transport system substrate-binding protein
D CHRYMOREF3P_1262 yehX; putative transporter subunit: ATP-binding component of ABC superfamily transporter K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CHRYMOREF3P_0118 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CHRYMOREF3P_2643 Phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CHRYMOREF3P_0120 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CHRYMOREF3P_2658 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CHRYMOREF3P_0119 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CHRYMOREF3P_2659 Methionine ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CHRYMOREF3P_1375 metQ; DL-methionine transporter subunit; periplasmic-binding component of ABC superfamily K02073 metQ; D-methionine transport system substrate-binding protein
D CHRYMOREF3P_1374 metI; DL-methionine transporter subunit; membrane component protein of ABC superfamily K02072 metI; D-methionine transport system permease protein
D CHRYMOREF3P_1373 metN; DL-methionine transporter subunit; ATP-binding component of ABC superfamily K02071 metN; D-methionine transport system ATP-binding protein
D CHRYMOREF3P_3247 Transport permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D CHRYMOREF3P_3246 Polysaccharide ABC transporter, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CHRYMOREF3P_3978 conserved membrane protein of unknown function K20461 nukG; lantibiotic transport system permease protein
D CHRYMOREF3P_3979 bcrA; Bacitracin transport ATP-binding protein BcrA K20459 nukF; lantibiotic transport system ATP-binding protein
D CHRYMOREF3P_3660 Permease K09808 lolC_E; lipoprotein-releasing system permease protein
D CHRYMOREF3P_1704 lolE; Lipoprotein-releasing system transmembrane protein lolE K09808 lolC_E; lipoprotein-releasing system permease protein
D CHRYMOREF3P_0045 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CHRYMOREF3P_0288 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein
D CHRYMOREF3P_3144 Lipopolysaccharide export system permease protein K11720 lptG; lipopolysaccharide export system permease protein
D CHRYMOREF3P_1851 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CHRYMOREF3P_4405 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CHRYMOREF3P_2431 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CHRYMOREF3P_3157 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CHRYMOREF3P_2394 ATP-binding cassette subfamily B protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CHRYMOREF3P_2272 ABC-type multidrug transport system fused ATPase/permease subunit K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:chrj03070]
D CHRYMOREF3P_4000 Outer membrane channel protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_2922 Outer membrane protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_0742 conserved protein of unknown function K12340 tolC; outer membrane protein
D CHRYMOREF3P_0796 Transporter K12340 tolC; outer membrane protein
D CHRYMOREF3P_1486 TolC family protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_4557 conserved exported protein of unknown function K12340 tolC; outer membrane protein
D CHRYMOREF3P_4610 secD; Protein-export membrane protein SecF,Protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D CHRYMOREF3P_2311 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CHRYMOREF3P_3850 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D CHRYMOREF3P_3363 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CHRYMOREF3P_2391 Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D CHRYMOREF3P_2199 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CHRYMOREF3P_2768 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CHRYMOREF3P_2067 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CHRYMOREF3P_1503 Preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CHRYMOREF3P_0726 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CHRYMOREF3P_4614 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CHRYMOREF3P_3464 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CHRYMOREF3P_0813 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CHRYMOREF3P_1751 Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CHRYMOREF3P_3922 Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CHRYMOREF3P_4738 Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:chrj02020]
D CHRYMOREF3P_3135 Two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CHRYMOREF3P_3472 Two-component system phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CHRYMOREF3P_1726 walR; Transcriptional regulatory protein WalR K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CHRYMOREF3P_0553 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CHRYMOREF3P_2500 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CHRYMOREF3P_3664 Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CHRYMOREF3P_3304 Protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CHRYMOREF3P_3952 Osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CHRYMOREF3P_3948 kdpA; potassium translocating ATPase, subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D CHRYMOREF3P_3949 kdpB; potassium translocating ATPase, subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D CHRYMOREF3P_3950 kdpC; Potassium-transporting ATPase KdpC subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D CHRYMOREF3P_4548 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CHRYMOREF3P_1811 TonB-dependent Receptor Plug Domain K19611 fepA; ferric enterobactin receptor
D CHRYMOREF3P_3387 Outer membrane receptor protein involved in Fe transport K19611 fepA; ferric enterobactin receptor
D CHRYMOREF3P_3187 conserved protein of unknown function K20483 nisB; lantibiotic biosynthesis protein
D CHRYMOREF3P_3186 conserved protein of unknown function K20484 nisC; lantibiotic biosynthesis protein
D CHRYMOREF3P_2783 DNA-binding NarL/FixJ family response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D CHRYMOREF3P_4762 Sensor histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D CHRYMOREF3P_2983 DNA-binding response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D CHRYMOREF3P_0744 conserved membrane protein of unknown function K07786 emrY; MFS transporter, DHA2 family, multidrug resistance protein
D CHRYMOREF3P_3377 Two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D CHRYMOREF3P_3373 DNA-binding response regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D CHRYMOREF3P_3072 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHRYMOREF3P_0060 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0697 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_3116 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_4510 dctA; C4-dicarboxylic acid, orotate and citrate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D CHRYMOREF3P_2216 C4-dicarboxylate ABC transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D CHRYMOREF3P_1930 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D CHRYMOREF3P_1786 Phytochrome, two-component sensor histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D CHRYMOREF3P_0128 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D CHRYMOREF3P_0448 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CHRYMOREF3P_1399 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CHRYMOREF3P_4193 Cytochrome c K08738 CYC; cytochrome c
D CHRYMOREF3P_4498 Cytochrome C K08738 CYC; cytochrome c
D CHRYMOREF3P_4780 Cytochrome C K08738 CYC; cytochrome c
D CHRYMOREF3P_4178 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CHRYMOREF3P_4179 Cytochrome-c oxidase K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CHRYMOREF3P_4175 Cytochrome c oxidase subunit CcoN K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D CHRYMOREF3P_0146 Cytochrome c oxidase subunit CcoN K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D CHRYMOREF3P_2186 Cytochrome c oxidase subunit CcoN K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D CHRYMOREF3P_2627 Cytochrome c oxidase subunit CcoN K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D CHRYMOREF3P_2188 Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CHRYMOREF3P_2629 Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CHRYMOREF3P_4503 putative Cytochrome bd2, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CHRYMOREF3P_4502 cydB; Cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CHRYMOREF3P_4000 Outer membrane channel protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_2922 Outer membrane protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_0742 conserved protein of unknown function K12340 tolC; outer membrane protein
D CHRYMOREF3P_0796 Transporter K12340 tolC; outer membrane protein
D CHRYMOREF3P_1486 TolC family protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_4557 conserved exported protein of unknown function K12340 tolC; outer membrane protein
D CHRYMOREF3P_4041 Polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D CHRYMOREF3P_1896 Polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D CHRYMOREF3P_4549 yfkJ; Low molecular weight protein-tyrosine-phosphatase yfkJ K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CHRYMOREF3P_4042 Tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHRYMOREF3P_1895 Polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHRYMOREF3P_2526 Gliding motility protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHRYMOREF3P_1159 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D CHRYMOREF3P_1167 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D CHRYMOREF3P_1051 Glycosyl hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHRYMOREF3P_4709 conserved protein of unknown function K07165 fecR; transmembrane sensor
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D CHRYMOREF3P_0782 Arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:chrj02024]
D CHRYMOREF3P_4494 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CHRYMOREF3P_4493 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CHRYMOREF3P_1172 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D CHRYMOREF3P_4390 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHRYMOREF3P_1618 Putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHRYMOREF3P_0448 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CHRYMOREF3P_3461 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CHRYMOREF3P_3656 5-amino-6-(5-phosphoribosylamino)uracil reductase,Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CHRYMOREF3P_0304 conserved protein of unknown function K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_1379 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_2099 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_2991 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_3783 Efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_4120 NodT family efflux transporter outer membrane factor (OMF) lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_4441 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_2199 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CHRYMOREF3P_4610 secD; Protein-export membrane protein SecF,Protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D CHRYMOREF3P_2311 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CHRYMOREF3P_3850 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D CHRYMOREF3P_3363 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CHRYMOREF3P_2391 Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D CHRYMOREF3P_2768 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CHRYMOREF3P_2067 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CHRYMOREF3P_1503 Preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CHRYMOREF3P_0726 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CHRYMOREF3P_2508 Phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D CHRYMOREF3P_3187 conserved protein of unknown function K20483 nisB; lantibiotic biosynthesis protein
D CHRYMOREF3P_3186 conserved protein of unknown function K20484 nisC; lantibiotic biosynthesis protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D CHRYMOREF3P_2421 conserved protein of unknown function K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:chrj02040]
D CHRYMOREF3P_2421 conserved protein of unknown function K02557 motB; chemotaxis protein MotB
D CHRYMOREF3P_0605 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CHRYMOREF3P_1930 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CHRYMOREF3P_3381 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:chrj04980]
D CHRYMOREF3P_1843 yvqK; Corrinoid adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CHRYMOREF3P_2664 argK; GTPase ArgK K07588 MMAA; GTPase [EC:3.6.5.-]
D CHRYMOREF3P_0714 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CHRYMOREF3P_2674 yliK; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:chrj01501]
D CHRYMOREF3P_3123 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CHRYMOREF3P_3459 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CHRYMOREF3P_0040 Transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CHRYMOREF3P_0828 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CHRYMOREF3P_2743 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CHRYMOREF3P_1052 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CHRYMOREF3P_1297 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CHRYMOREF3P_3781 Efflux transporter, rnd family K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_4118 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0169 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0302 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0795 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_1381 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_2097 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_2989 Membrane fusion protein (Multidrug efflux system) K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0304 conserved protein of unknown function K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_1379 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_2099 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_2991 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_3783 Efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_4120 NodT family efflux transporter outer membrane factor (OMF) lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_4441 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_4000 Outer membrane channel protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_2922 Outer membrane protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_0742 conserved protein of unknown function K12340 tolC; outer membrane protein
D CHRYMOREF3P_0796 Transporter K12340 tolC; outer membrane protein
D CHRYMOREF3P_1486 TolC family protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_4557 conserved exported protein of unknown function K12340 tolC; outer membrane protein
D CHRYMOREF3P_3051 Monofunctional biosynthetic peptidoglycan transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHRYMOREF3P_3068 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CHRYMOREF3P_2790 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CHRYMOREF3P_1591 ccrA; Metallo-beta-lactamase type 2 K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
D CHRYMOREF3P_0600 blaB; Metallo-beta-lactamase type 2 K19216 blaIND; metallo-beta-lactamase class B IND [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:chrj01502]
D CHRYMOREF3P_3604 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CHRYMOREF3P_2881 Alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D CHRYMOREF3P_1587 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CHRYMOREF3P_2792 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CHRYMOREF3P_2795 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:chrj01503]
D CHRYMOREF3P_1980 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHRYMOREF3P_3299 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHRYMOREF3P_3304 Protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CHRYMOREF3P_4894 Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CHRYMOREF3P_3781 Efflux transporter, rnd family K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_4118 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0169 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0302 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0795 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_1381 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_2097 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_2989 Membrane fusion protein (Multidrug efflux system) K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_4000 Outer membrane channel protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_2922 Outer membrane protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_0742 conserved protein of unknown function K12340 tolC; outer membrane protein
D CHRYMOREF3P_0796 Transporter K12340 tolC; outer membrane protein
D CHRYMOREF3P_1486 TolC family protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_4557 conserved exported protein of unknown function K12340 tolC; outer membrane protein
D CHRYMOREF3P_1863 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:chrj01000]
C 01001 Protein kinases [BR:chrj01001]
D CHRYMOREF3P_3606 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CHRYMOREF3P_4042 Tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHRYMOREF3P_1895 Polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHRYMOREF3P_2526 Gliding motility protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHRYMOREF3P_3135 Two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CHRYMOREF3P_3472 Two-component system phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CHRYMOREF3P_3952 Osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CHRYMOREF3P_4762 Sensor histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D CHRYMOREF3P_3377 Two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D CHRYMOREF3P_0364 Two-component sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D CHRYMOREF3P_4068 Histidine kinase/DNA gyrase B/HSP90-like ATPase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D CHRYMOREF3P_1695 Histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CHRYMOREF3P_2901 Histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CHRYMOREF3P_2968 GHKL domain-containing protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CHRYMOREF3P_1786 Phytochrome, two-component sensor histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D CHRYMOREF3P_0128 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:chrj01009]
D CHRYMOREF3P_1595 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CHRYMOREF3P_2159 pfkA; ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHRYMOREF3P_2170 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:chrj01002]
D CHRYMOREF3P_2577 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CHRYMOREF3P_1326 Aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D CHRYMOREF3P_2982 Peptidase C14 K22684 MCA1; metacaspase-1 [EC:3.4.22.-]
D CHRYMOREF3P_4580 guaA; GMP synthetase (glutamine aminotransferase) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CHRYMOREF3P_3261 ABC-type branched-chain amino acid transport system, substrate-binding protein K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D CHRYMOREF3P_2416 Hydrolase Nlp/P60 K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D CHRYMOREF3P_0338 Hydrolase Nlp/P60 K13695 nlpC; probable lipoprotein NlpC
D CHRYMOREF3P_3071 Lipoprotein Spr K13695 nlpC; probable lipoprotein NlpC
D CHRYMOREF3P_0395 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CHRYMOREF3P_3771 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CHRYMOREF3P_1883 Glucosamine 6-phosphate synthetase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CHRYMOREF3P_3834 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CHRYMOREF3P_2636 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CHRYMOREF3P_0126 L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB
D CHRYMOREF3P_1425 CPBP family intramembrane metalloprotease domain-containing protein K07052 K07052; CAAX protease family protein
D CHRYMOREF3P_4395 CPBP family intramembrane metalloprotease domain-containing protein K07052 K07052; CAAX protease family protein
D CHRYMOREF3P_1719 Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CHRYMOREF3P_1946 Peptidase M3 K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D CHRYMOREF3P_3593 dcp; dipeptidyl carboxypeptidase II K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D CHRYMOREF3P_2086 Por secretion system C-terminal sorting domain-containing protein K01400 nprE; bacillolysin [EC:3.4.24.28]
D CHRYMOREF3P_2382 Flavastacin K20138 P40; flavastacin [EC:3.4.24.76]
D CHRYMOREF3P_4090 M13 family peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CHRYMOREF3P_4091 Endothelin-converting protein K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CHRYMOREF3P_0085 pepO; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CHRYMOREF3P_3092 Peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D CHRYMOREF3P_3852 Peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-]
D CHRYMOREF3P_2002 Peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-]
D CHRYMOREF3P_3851 Putative Zn-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D CHRYMOREF3P_0759 Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CHRYMOREF3P_0372 Peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CHRYMOREF3P_3792 Peptidase K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D CHRYMOREF3P_2973 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CHRYMOREF3P_3845 pepD; Cytosol non-specific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CHRYMOREF3P_3790 mapB; Methionine aminopeptidase 2 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CHRYMOREF3P_0017 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CHRYMOREF3P_0517 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CHRYMOREF3P_1448 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CHRYMOREF3P_0358 T9SS C-terminal target domain-containing protein K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10]
D CHRYMOREF3P_4900 Peptidase M28 K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-]
D CHRYMOREF3P_4902 Zn-dependent M28 family amino/carboxypeptidase K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-]
D CHRYMOREF3P_3147 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CHRYMOREF3P_3409 Peptidase K07387 K07387; metalloprotease [EC:3.4.24.-]
D CHRYMOREF3P_2726 Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CHRYMOREF3P_3620 Zn-dependent protease K06974 amzA; archaemetzincin [EC:3.4.-.-]
D CHRYMOREF3P_0575 Beta-peptidyl aminopeptidase BapA K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D CHRYMOREF3P_3304 Protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CHRYMOREF3P_4027 Subtilase family protein K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D CHRYMOREF3P_4594 Serine protease K17734 aprX; serine protease AprX [EC:3.4.21.-]
D CHRYMOREF3P_2676 f1pep; Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D CHRYMOREF3P_3754 Dipeptidyl-peptidase-4 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CHRYMOREF3P_0516 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CHRYMOREF3P_3581 ptpA; Prolyl tripeptidyl peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CHRYMOREF3P_3138 ptrB; Protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D CHRYMOREF3P_1663 CubicO group peptidase (Beta-lactamase class C family) K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D CHRYMOREF3P_4451 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CHRYMOREF3P_0818 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CHRYMOREF3P_4322 clpP; proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CHRYMOREF3P_2645 lon; DNA-binding ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CHRYMOREF3P_4025 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CHRYMOREF3P_1480 Alpha/beta hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CHRYMOREF3P_1783 Alpha/beta hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CHRYMOREF3P_2894 Tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CHRYMOREF3P_4714 Peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CHRYMOREF3P_2727 Tricorn protease homolog K08676 tri; tricorn protease [EC:3.4.21.-]
D CHRYMOREF3P_2069 Protease-4 K04773 sppA; protease IV [EC:3.4.21.-]
D CHRYMOREF3P_0820 pepE; Peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D CHRYMOREF3P_0769 Cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D CHRYMOREF3P_2807 Rhomboid family protein K07059 K07059; rhomboid family protein
D CHRYMOREF3P_2871 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CHRYMOREF3P_0771 Isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CHRYMOREF3P_4511 ggt; Glutathione hydrolase proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CHRYMOREF3P_1109 Ecotin K08276 eco; ecotin
D CHRYMOREF3P_2238 Serine protease inhibitor ecotin K08276 eco; ecotin
C 01003 Glycosyltransferases [BR:chrj01003]
D CHRYMOREF3P_3141 Undecaprenyl-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D CHRYMOREF3P_3769 Starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CHRYMOREF3P_0756 glgA; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CHRYMOREF3P_1115 mtgA; Biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CHRYMOREF3P_3051 Monofunctional biosynthetic peptidoglycan transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHRYMOREF3P_2528 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:chrj01005]
D CHRYMOREF3P_1863 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CHRYMOREF3P_2370 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CHRYMOREF3P_1864 lpxC_fabZ; UDP-3-O-acyl-N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CHRYMOREF3P_1860 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CHRYMOREF3P_1865 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CHRYMOREF3P_2020 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CHRYMOREF3P_2275 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CHRYMOREF3P_4145 Lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CHRYMOREF3P_0747 Lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CHRYMOREF3P_2413 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CHRYMOREF3P_0617 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CHRYMOREF3P_0659 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CHRYMOREF3P_2865 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CHRYMOREF3P_0812 Uncharacterized phosphosugar isomerase aq_1546 K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CHRYMOREF3P_0344 ykcC; Uncharacterized glycosyltransferase YkcC K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CHRYMOREF3P_2528 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:chrj01011]
D CHRYMOREF3P_2041 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CHRYMOREF3P_2058 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CHRYMOREF3P_2796 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CHRYMOREF3P_2793 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CHRYMOREF3P_2791 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CHRYMOREF3P_2881 Alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D CHRYMOREF3P_3604 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CHRYMOREF3P_3610 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CHRYMOREF3P_2871 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CHRYMOREF3P_2792 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CHRYMOREF3P_2795 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CHRYMOREF3P_4407 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHRYMOREF3P_4615 Phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHRYMOREF3P_3051 Monofunctional biosynthetic peptidoglycan transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHRYMOREF3P_3068 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CHRYMOREF3P_2790 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CHRYMOREF3P_4451 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CHRYMOREF3P_0818 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CHRYMOREF3P_1663 CubicO group peptidase (Beta-lactamase class C family) K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D CHRYMOREF3P_1115 mtgA; Biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CHRYMOREF3P_0126 L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB
D CHRYMOREF3P_3261 ABC-type branched-chain amino acid transport system, substrate-binding protein K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D CHRYMOREF3P_3092 Peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D CHRYMOREF3P_3929 Lytic murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CHRYMOREF3P_4600 mltG; Endolytic murein transglycosylase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CHRYMOREF3P_1871 rlpA; putative endolytic peptidoglycan transglycosylase RlpA K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CHRYMOREF3P_1980 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHRYMOREF3P_3299 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHRYMOREF3P_3990 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:chrj01004]
D CHRYMOREF3P_3262 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CHRYMOREF3P_4515 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHRYMOREF3P_0285 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHRYMOREF3P_1471 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHRYMOREF3P_2538 putative Beta-ketoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHRYMOREF3P_3223 3-oxoacyl-(acyl-carrier-protein) synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHRYMOREF3P_2565 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CHRYMOREF3P_2348 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHRYMOREF3P_3114 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHRYMOREF3P_2551 Beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHRYMOREF3P_4775 Short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_0909 Short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_0911 Uncharacterized oxidoreductase MexAM1_META1p0182 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_2566 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_2887 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHRYMOREF3P_2556 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CHRYMOREF3P_1864 lpxC_fabZ; UDP-3-O-acyl-N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CHRYMOREF3P_0002 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CHRYMOREF3P_4109 2-nitropropane dioxygenase npd K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CHRYMOREF3P_1068 Lysophospholipase L1-like esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CHRYMOREF3P_0015 Acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D CHRYMOREF3P_3431 Linoleoyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D CHRYMOREF3P_4623 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHRYMOREF3P_4624 prpE; propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D CHRYMOREF3P_4390 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHRYMOREF3P_1618 Putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHRYMOREF3P_1928 yngI; Putative acyl-CoA synthetase YngI K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D CHRYMOREF3P_3555 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:chrj01006]
D CHRYMOREF3P_4004 Octaprenyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CHRYMOREF3P_1334 Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CHRYMOREF3P_2524 ispU; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CHRYMOREF3P_2100 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CHRYMOREF3P_0674 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CHRYMOREF3P_4030 Decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:chrj01007]
D CHRYMOREF3P_1673 glnS; glutamyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CHRYMOREF3P_2453 gltX; Glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CHRYMOREF3P_4070 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHRYMOREF3P_1963 tyrS; Tyrosine--tRNA ligase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHRYMOREF3P_2579 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CHRYMOREF3P_3437 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CHRYMOREF3P_2192 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CHRYMOREF3P_4564 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CHRYMOREF3P_2573 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CHRYMOREF3P_1919 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CHRYMOREF3P_2408 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CHRYMOREF3P_4500 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CHRYMOREF3P_2380 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CHRYMOREF3P_1931 asnS; asparaginyl tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CHRYMOREF3P_0779 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CHRYMOREF3P_3105 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CHRYMOREF3P_2634 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CHRYMOREF3P_4364 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CHRYMOREF3P_0371 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CHRYMOREF3P_4342 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CHRYMOREF3P_3840 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CHRYMOREF3P_1057 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CHRYMOREF3P_4915 aatA; Aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_0662 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_2056 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHRYMOREF3P_0055 Beta-lyase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D CHRYMOREF3P_0852 ybdL; Methionine aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D CHRYMOREF3P_0349 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHRYMOREF3P_4454 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CHRYMOREF3P_4875 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CHRYMOREF3P_0623 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CHRYMOREF3P_0472 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CHRYMOREF3P_1260 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CHRYMOREF3P_0298 lat; putative L-lysine-epsilon aminotransferase K03918 lat; L-lysine 6-transaminase [EC:2.6.1.36]
D CHRYMOREF3P_2440 Ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D CHRYMOREF3P_4635 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CHRYMOREF3P_1983 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CHRYMOREF3P_0476 bioA; Adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CHRYMOREF3P_1732 hemL; glutamate-1-semialdehyde aminotransferase (aminomutase) K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CHRYMOREF3P_4329 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHRYMOREF3P_4892 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHRYMOREF3P_4905 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CHRYMOREF3P_4595 degT; Pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CHRYMOREF3P_1892 wbpE; UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:chrj00194]
D CHRYMOREF3P_0650 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CHRYMOREF3P_0651 atpD; F1 sector of membrane-bound ATP synthase, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CHRYMOREF3P_0719 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CHRYMOREF3P_0720 atpA; F1 sector of membrane-bound ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CHRYMOREF3P_0721 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CHRYMOREF3P_0722 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CHRYMOREF3P_0723 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CHRYMOREF3P_0724 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:chrj03000]
D CHRYMOREF3P_4176 Helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHRYMOREF3P_0144 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHRYMOREF3P_1451 chbR; Chb operon repressor K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHRYMOREF3P_1730 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHRYMOREF3P_1804 Transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHRYMOREF3P_2964 Helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHRYMOREF3P_0064 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHRYMOREF3P_0540 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHRYMOREF3P_0855 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHRYMOREF3P_1029 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHRYMOREF3P_1198 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHRYMOREF3P_1938 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHRYMOREF3P_4416 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHRYMOREF3P_4556 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHRYMOREF3P_4855 AraC family transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D CHRYMOREF3P_0442 AraC family transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D CHRYMOREF3P_1353 AraC family transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D CHRYMOREF3P_4371 AraC family transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D CHRYMOREF3P_4751 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D CHRYMOREF3P_2897 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D CHRYMOREF3P_1936 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D CHRYMOREF3P_4661 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D CHRYMOREF3P_1837 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D CHRYMOREF3P_2589 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CHRYMOREF3P_4524 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CHRYMOREF3P_3342 DeoR/GlpR transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D CHRYMOREF3P_1147 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CHRYMOREF3P_0422 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CHRYMOREF3P_0470 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CHRYMOREF3P_0797 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D CHRYMOREF3P_0432 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CHRYMOREF3P_0802 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CHRYMOREF3P_3496 TetR/AcrR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D CHRYMOREF3P_3802 Transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D CHRYMOREF3P_2134 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D CHRYMOREF3P_4375 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CHRYMOREF3P_4852 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CHRYMOREF3P_0577 HTH asnC-type domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CHRYMOREF3P_1385 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CHRYMOREF3P_4480 ohrR; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CHRYMOREF3P_0006 ohrR; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CHRYMOREF3P_0268 DNA-binding MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CHRYMOREF3P_0072 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CHRYMOREF3P_0550 Zinc uptake regulation protein ZUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CHRYMOREF3P_1988 Ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CHRYMOREF3P_3279 Zinc uptake regulation protein ZUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CHRYMOREF3P_0448 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CHRYMOREF3P_4436 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CHRYMOREF3P_0152 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CHRYMOREF3P_2296 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CHRYMOREF3P_4768 transcriptional regulator, Crp/Fnr family K21556 malR; CRP/FNR family transcriptional regulator, polysaccharide utilization system transcription regulator
D CHRYMOREF3P_0878 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CHRYMOREF3P_0181 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D CHRYMOREF3P_2030 DNA-binding protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D CHRYMOREF3P_1644 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D CHRYMOREF3P_2478 ywzG; Putative DNA-binding protein YwzG K10947 K10947; PadR family transcriptional regulator
D CHRYMOREF3P_0599 Iron (Metal) dependent repressor, dtxr family protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CHRYMOREF3P_0040 Transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CHRYMOREF3P_0828 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CHRYMOREF3P_2743 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CHRYMOREF3P_3145 BirA family biotin operon repressor/biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CHRYMOREF3P_4272 Putative transcriptional regulator K07727 K07727; putative transcriptional regulator
D CHRYMOREF3P_2377 Transcriptional regulator K07727 K07727; putative transcriptional regulator
D CHRYMOREF3P_4022 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CHRYMOREF3P_2175 Regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D CHRYMOREF3P_2356 PaiB family negative transcriptional regulator K07734 paiB; transcriptional regulator
D CHRYMOREF3P_1979 Putative transcriptional regulator K07735 algH; putative transcriptional regulator
D CHRYMOREF3P_2574 putative DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D CHRYMOREF3P_2787 mraZ; Transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:chrj03021]
D CHRYMOREF3P_3369 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CHRYMOREF3P_2299 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CHRYMOREF3P_2298 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CHRYMOREF3P_0605 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CHRYMOREF3P_4071 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHRYMOREF3P_0313 Sigma70_r2 domain-containing protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHRYMOREF3P_0930 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHRYMOREF3P_1036 RNA polymerase sigma-70 factor (ECF subfamily) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHRYMOREF3P_1039 RNA polymerase sigma-70 factor (ECF subfamily) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHRYMOREF3P_1926 RNA polymerase sigma-70 factor (ECF subfamily) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHRYMOREF3P_2269 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHRYMOREF3P_2652 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHRYMOREF3P_1930 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D CHRYMOREF3P_3253 nusA; Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D CHRYMOREF3P_2393 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D CHRYMOREF3P_2310 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CHRYMOREF3P_2574 putative DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D CHRYMOREF3P_3543 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CHRYMOREF3P_3160 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:chrj03019]
D CHRYMOREF3P_3914 Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D CHRYMOREF3P_2349 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CHRYMOREF3P_4521 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CHRYMOREF3P_2873 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CHRYMOREF3P_4008 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHRYMOREF3P_4585 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHRYMOREF3P_0405 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHRYMOREF3P_1284 protein of unknown function K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHRYMOREF3P_4001 cshA; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHRYMOREF3P_0811 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CHRYMOREF3P_2074 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CHRYMOREF3P_3381 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHRYMOREF3P_4267 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CHRYMOREF3P_3160 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CHRYMOREF3P_2159 pfkA; ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHRYMOREF3P_1815 dnaK; chaperone Hsp70, co-chaperone with DnaJ K04043 dnaK; molecular chaperone DnaK
D CHRYMOREF3P_2220 groL; Cpn60 chaperonin GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHRYMOREF3P_1817 ppk; polyphosphate kinase, component of RNA degradosome K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CHRYMOREF3P_1770 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:chrj03011]
D CHRYMOREF3P_4421 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CHRYMOREF3P_2466 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CHRYMOREF3P_3349 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CHRYMOREF3P_3368 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CHRYMOREF3P_3360 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CHRYMOREF3P_0737 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CHRYMOREF3P_3328 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CHRYMOREF3P_3357 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CHRYMOREF3P_2467 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CHRYMOREF3P_3330 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CHRYMOREF3P_3367 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CHRYMOREF3P_3327 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CHRYMOREF3P_3366 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CHRYMOREF3P_3356 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CHRYMOREF3P_4264 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CHRYMOREF3P_1941 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CHRYMOREF3P_3352 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CHRYMOREF3P_0738 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CHRYMOREF3P_3347 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CHRYMOREF3P_3297 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CHRYMOREF3P_2323 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CHRYMOREF3P_2374 30S ribosomal protein Thx K19033 PSRP4; 30S ribosomal protein S31
D CHRYMOREF3P_2305 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CHRYMOREF3P_3346 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CHRYMOREF3P_3343 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CHRYMOREF3P_3344 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CHRYMOREF3P_3355 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CHRYMOREF3P_3358 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CHRYMOREF3P_0739 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CHRYMOREF3P_2304 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CHRYMOREF3P_2306 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CHRYMOREF3P_2303 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CHRYMOREF3P_2468 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CHRYMOREF3P_3353 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CHRYMOREF3P_3362 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CHRYMOREF3P_3350 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CHRYMOREF3P_3370 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CHRYMOREF3P_3359 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CHRYMOREF3P_4427 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CHRYMOREF3P_0359 rplT; 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CHRYMOREF3P_2733 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D CHRYMOREF3P_3348 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CHRYMOREF3P_3345 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CHRYMOREF3P_3354 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CHRYMOREF3P_2732 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CHRYMOREF3P_2063 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CHRYMOREF3P_3351 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CHRYMOREF3P_3361 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CHRYMOREF3P_2494 rpmE; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D CHRYMOREF3P_2437 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CHRYMOREF3P_2064 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CHRYMOREF3P_2430 rpmH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CHRYMOREF3P_0360 rpmI; 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CHRYMOREF3P_3365 rpmJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CHRYMOREF3P_3057 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:chrj03009]
D CHRYMOREF3P_2349 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CHRYMOREF3P_0021 era; GTPase Era K03595 era; GTPase
D CHRYMOREF3P_4011 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D CHRYMOREF3P_2574 putative DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D CHRYMOREF3P_3253 nusA; Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D CHRYMOREF3P_2393 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D CHRYMOREF3P_2310 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CHRYMOREF3P_4404 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CHRYMOREF3P_3836 RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CHRYMOREF3P_3613 rsmD; 16S rRNA (Guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CHRYMOREF3P_3798 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CHRYMOREF3P_4917 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CHRYMOREF3P_2788 mraW; S-adenosyl-dependent methyltransferase activity on membrane-located substrates K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CHRYMOREF3P_4551 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CHRYMOREF3P_2884 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CHRYMOREF3P_1662 23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CHRYMOREF3P_2942 SpoU rRNA Methylase family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CHRYMOREF3P_4499 rlmF; Ribosomal RNA large subunit methyltransferase F K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D CHRYMOREF3P_4618 rlmH; Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CHRYMOREF3P_4369 RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D CHRYMOREF3P_1337 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CHRYMOREF3P_2363 Uncharacterized RNA methyltransferase BT_0643 K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CHRYMOREF3P_0403 Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CHRYMOREF3P_2621 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CHRYMOREF3P_3607 Uncharacterized RNA pseudouridine synthase Cpar_0723 K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CHRYMOREF3P_4409 yjbC; 23S rRNA pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D CHRYMOREF3P_1940 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D CHRYMOREF3P_1874 rimO; Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CHRYMOREF3P_3963 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CHRYMOREF3P_3914 Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D CHRYMOREF3P_3622 Putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CHRYMOREF3P_4001 cshA; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHRYMOREF3P_4881 rsgA; Small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CHRYMOREF3P_2034 der; GTPase Der K03977 engA; GTPase
D CHRYMOREF3P_3007 hflX; GTPase HflX K03665 hflX; GTPase
D CHRYMOREF3P_1768 Sua5 YciO YrdC YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CHRYMOREF3P_4621 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CHRYMOREF3P_3661 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CHRYMOREF3P_3252 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D CHRYMOREF3P_3146 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D CHRYMOREF3P_2879 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D CHRYMOREF3P_2321 Ribosome hibernation protein YhbH K05808 hpf; ribosome hibernation promoting factor
D CHRYMOREF3P_0858 ychF; putative GTP-binding protein K06942 ychF; ribosome-binding ATPase
D CHRYMOREF3P_2436 conserved protein of unknown function K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:chrj03016]
D CHRYMOREF3P_3692 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CHRYMOREF3P_4397 rnz; Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CHRYMOREF3P_2670 Protein RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D CHRYMOREF3P_4364 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CHRYMOREF3P_2573 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CHRYMOREF3P_2408 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CHRYMOREF3P_4564 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CHRYMOREF3P_1673 glnS; glutamyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CHRYMOREF3P_2192 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CHRYMOREF3P_4500 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CHRYMOREF3P_2380 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CHRYMOREF3P_4342 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CHRYMOREF3P_1931 asnS; asparaginyl tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CHRYMOREF3P_3105 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CHRYMOREF3P_0371 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CHRYMOREF3P_2634 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CHRYMOREF3P_3437 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CHRYMOREF3P_1919 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CHRYMOREF3P_0779 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CHRYMOREF3P_3840 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CHRYMOREF3P_1057 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CHRYMOREF3P_4070 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHRYMOREF3P_1963 tyrS; Tyrosine--tRNA ligase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHRYMOREF3P_2579 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CHRYMOREF3P_3540 dtd; D-tyr-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CHRYMOREF3P_3544 Histidine triad (HIT) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CHRYMOREF3P_2462 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CHRYMOREF3P_2274 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CHRYMOREF3P_4408 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CHRYMOREF3P_4035 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CHRYMOREF3P_1768 Sua5 YciO YrdC YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CHRYMOREF3P_2100 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CHRYMOREF3P_1388 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CHRYMOREF3P_2878 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CHRYMOREF3P_2704 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CHRYMOREF3P_2844 kptA; putative RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D CHRYMOREF3P_2453 gltX; Glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CHRYMOREF3P_3080 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CHRYMOREF3P_2132 dus; putative tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CHRYMOREF3P_2712 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CHRYMOREF3P_3761 mtaB; Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CHRYMOREF3P_2136 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CHRYMOREF3P_3797 trmH; tRNA (guanosine(18)-2'-O)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D CHRYMOREF3P_4617 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CHRYMOREF3P_2432 tRNA1(Val) (adenine(37)-N6)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D CHRYMOREF3P_0276 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D CHRYMOREF3P_3311 rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D CHRYMOREF3P_3106 truC; tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D CHRYMOREF3P_2913 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CHRYMOREF3P_3031 putative iron binding protein from the HesB_IscA_SufA family K13628 iscA; iron-sulfur cluster assembly protein
D CHRYMOREF3P_2736 tRNA-(Ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D CHRYMOREF3P_1339 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CHRYMOREF3P_2021 Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CHRYMOREF3P_2655 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CHRYMOREF3P_4113 queG; Epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CHRYMOREF3P_3143 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CHRYMOREF3P_2422 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CHRYMOREF3P_2868 putative Inactive homolog of metal-dependent proteases, molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CHRYMOREF3P_3800 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CHRYMOREF3P_4320 ATPase YjeE, predicted to have essential role in cell wall biosynthesis K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CHRYMOREF3P_2703 tcdA; tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CHRYMOREF3P_2873 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CHRYMOREF3P_4267 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:chrj03012]
D CHRYMOREF3P_0013 Translation initiation factor SUI1-related protein K03113 EIF1; translation initiation factor 1
D CHRYMOREF3P_3254 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CHRYMOREF3P_0370 infC; protein chain initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CHRYMOREF3P_2008 Glycosyl transferase family 2 K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CHRYMOREF3P_2456 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D CHRYMOREF3P_2312 tufB; protein chain elongation factor EF-Tu (duplicate of tufA) K02358 tuf; elongation factor Tu
D CHRYMOREF3P_3707 fusA; Elongation factor G K02355 fusA; elongation factor G
D CHRYMOREF3P_3329 fusA; protein chain elongation factor EF-G, GTP-binding K02355 fusA; elongation factor G
D CHRYMOREF3P_2678 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CHRYMOREF3P_0284 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D CHRYMOREF3P_0836 prmC; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CHRYMOREF3P_3212 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CHRYMOREF3P_3364 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CHRYMOREF3P_1861 efp; Elongation factor P K02356 efp; elongation factor P
D CHRYMOREF3P_4353 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D CHRYMOREF3P_4394 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D CHRYMOREF3P_2668 Peptide chain release factor homolog K02839 prfH; peptide chain release factor
D CHRYMOREF3P_2177 Aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:chrj03110]
D CHRYMOREF3P_3495 clpB; protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CHRYMOREF3P_3928 ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CHRYMOREF3P_2916 tlyB; Hemolysin B K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CHRYMOREF3P_3545 clpX; ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CHRYMOREF3P_2170 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CHRYMOREF3P_1815 dnaK; chaperone Hsp70, co-chaperone with DnaJ K04043 dnaK; molecular chaperone DnaK
D CHRYMOREF3P_2220 groL; Cpn60 chaperonin GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHRYMOREF3P_4360 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CHRYMOREF3P_1709 DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein
D CHRYMOREF3P_4361 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE
D CHRYMOREF3P_0131 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D CHRYMOREF3P_3764 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 hslR; ribosome-associated heat shock protein Hsp15
D CHRYMOREF3P_2218 groS; 10 kDa chaperonin 1 K04078 groES; chaperonin GroES
D CHRYMOREF3P_3304 Protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CHRYMOREF3P_3147 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CHRYMOREF3P_0724 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CHRYMOREF3P_1503 Preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CHRYMOREF3P_3448 Eukaryotic translation initiation factor 3 110 kDa subunit K06006 cpxP; periplasmic protein CpxP/Spy
D CHRYMOREF3P_4027 Subtilase family protein K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D CHRYMOREF3P_4435 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CHRYMOREF3P_4894 Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CHRYMOREF3P_2644 Peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D CHRYMOREF3P_3719 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (fragment) K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D CHRYMOREF3P_3589 Peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D CHRYMOREF3P_4107 Peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D CHRYMOREF3P_4036 trxA; Thioredoxin K03671 TXN; thioredoxin
D CHRYMOREF3P_4912 Thiol reductase thioredoxin K03671 TXN; thioredoxin
D CHRYMOREF3P_2723 Thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:chrj04131]
D CHRYMOREF3P_4882 ndk; multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CHRYMOREF3P_2160 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHRYMOREF3P_0435 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CHRYMOREF3P_2351 pyk; Pyruvate kinase 2 K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CHRYMOREF3P_2170 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CHRYMOREF3P_0696 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:chrj03051]
D CHRYMOREF3P_2170 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CHRYMOREF3P_3082 WYL domain-containing protein K13572 pafB; proteasome accessory factor B
C 03032 DNA replication proteins [BR:chrj03032]
D CHRYMOREF3P_3196 rnhA; ribonuclease HI, degrades RNA of DNA-RNA hybrids K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CHRYMOREF3P_2080 AAA family ATPase K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D CHRYMOREF3P_3915 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CHRYMOREF3P_1977 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D CHRYMOREF3P_4548 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CHRYMOREF3P_3197 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CHRYMOREF3P_4321 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CHRYMOREF3P_0781 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CHRYMOREF3P_4381 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHRYMOREF3P_1062 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHRYMOREF3P_4671 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHRYMOREF3P_1488 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHRYMOREF3P_0749 dinG; putative ATP-dependent helicase dinG homolog K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_1995 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_2718 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_4877 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHRYMOREF3P_2198 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CHRYMOREF3P_3933 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CHRYMOREF3P_3956 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CHRYMOREF3P_0677 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CHRYMOREF3P_4504 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CHRYMOREF3P_0845 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CHRYMOREF3P_0847 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CHRYMOREF3P_1450 DNA topoisomerase IB (poxvirus type) K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CHRYMOREF3P_2532 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CHRYMOREF3P_4217 DNA topoisomerase III, Bacteroidales-type K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CHRYMOREF3P_0189 DNA topoisomerase III, Bacteroidales-type K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CHRYMOREF3P_1356 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:chrj03036]
D CHRYMOREF3P_2349 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CHRYMOREF3P_3915 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CHRYMOREF3P_1977 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D CHRYMOREF3P_1709 DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein
D CHRYMOREF3P_1708 MerR family transcriptional regulator K18997 cbpM; chaperone modulatory protein CbpM
D CHRYMOREF3P_4548 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CHRYMOREF3P_0123 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase K04047 dps; starvation-inducible DNA-binding protein
D CHRYMOREF3P_3326 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase K04047 dps; starvation-inducible DNA-binding protein
D CHRYMOREF3P_4375 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CHRYMOREF3P_4852 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CHRYMOREF3P_0577 HTH asnC-type domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CHRYMOREF3P_1385 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CHRYMOREF3P_2798 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CHRYMOREF3P_2431 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CHRYMOREF3P_2790 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CHRYMOREF3P_0290 Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CHRYMOREF3P_2797 Cell division protein ftsQ K03589 ftsQ; cell division protein FtsQ
D CHRYMOREF3P_2794 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CHRYMOREF3P_4405 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CHRYMOREF3P_2799 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CHRYMOREF3P_4520 Cell division protein ZapA K09888 zapA; cell division protein ZapA
D CHRYMOREF3P_1980 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHRYMOREF3P_3299 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHRYMOREF3P_3781 Efflux transporter, rnd family K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_4118 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0169 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0302 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0795 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_1381 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_2097 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_2989 Membrane fusion protein (Multidrug efflux system) K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_3065 mreB; cell wall structural complex MreBCD, actin-like component MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CHRYMOREF3P_3066 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CHRYMOREF3P_3069 Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D CHRYMOREF3P_4021 soj; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CHRYMOREF3P_4022 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CHRYMOREF3P_0845 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CHRYMOREF3P_0847 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CHRYMOREF3P_2878 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CHRYMOREF3P_4917 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CHRYMOREF3P_4818 conserved protein of unknown function K03733 xerC; integrase/recombinase XerC
D CHRYMOREF3P_2322 Integrase, site-specific recombinase K03733 xerC; integrase/recombinase XerC
D CHRYMOREF3P_4817 Phage_integrase domain-containing protein K04763 xerD; integrase/recombinase XerD
D CHRYMOREF3P_2593 xerD; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CHRYMOREF3P_1824 mrp; Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CHRYMOREF3P_2785 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:chrj03400]
D CHRYMOREF3P_4659 ogt; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CHRYMOREF3P_0075 Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D CHRYMOREF3P_1632 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CHRYMOREF3P_0513 Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CHRYMOREF3P_4104 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CHRYMOREF3P_2928 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CHRYMOREF3P_0604 S1/P1 Nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D CHRYMOREF3P_2857 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CHRYMOREF3P_4890 ADP-ribose pyrophosphatase YjhB (NUDIX family) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CHRYMOREF3P_4924 conserved protein of unknown function K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CHRYMOREF3P_4661 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D CHRYMOREF3P_1837 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D CHRYMOREF3P_0510 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D CHRYMOREF3P_0004 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CHRYMOREF3P_1479 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CHRYMOREF3P_0972 Endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CHRYMOREF3P_0561 Exodeoxyribonuclease-3 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CHRYMOREF3P_1870 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CHRYMOREF3P_0059 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D CHRYMOREF3P_3407 Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CHRYMOREF3P_3956 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CHRYMOREF3P_3933 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CHRYMOREF3P_0255 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CHRYMOREF3P_0685 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CHRYMOREF3P_2745 uvrB; excinulease of nucleotide excision repair, DNA damage recognition component K03702 uvrB; excinuclease ABC subunit B
D CHRYMOREF3P_3574 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CHRYMOREF3P_3854 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHRYMOREF3P_2334 DNA helicase-2/ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHRYMOREF3P_2299 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CHRYMOREF3P_2298 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CHRYMOREF3P_3369 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CHRYMOREF3P_3206 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CHRYMOREF3P_2948 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CHRYMOREF3P_1636 Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D CHRYMOREF3P_2808 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CHRYMOREF3P_4381 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHRYMOREF3P_1062 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHRYMOREF3P_4671 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHRYMOREF3P_1488 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHRYMOREF3P_0749 dinG; putative ATP-dependent helicase dinG homolog K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_1995 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_2718 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHRYMOREF3P_4877 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHRYMOREF3P_0781 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CHRYMOREF3P_2167 recA; DNA strand exchange and recombination protein with protease and nuclease activity K03553 recA; recombination protein RecA
D CHRYMOREF3P_3560 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CHRYMOREF3P_2355 ruvB; ATP-dependent DNA helicase, component of RuvABC resolvasome K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CHRYMOREF3P_2482 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CHRYMOREF3P_4450 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CHRYMOREF3P_3585 Exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D CHRYMOREF3P_3586 Exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D CHRYMOREF3P_2202 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CHRYMOREF3P_1112 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CHRYMOREF3P_3743 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CHRYMOREF3P_3735 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CHRYMOREF3P_3848 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D CHRYMOREF3P_2695 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CHRYMOREF3P_2719 putative ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D CHRYMOREF3P_2385 ku; Non-homologous end joining protein Ku K10979 ku; DNA end-binding protein Ku
D CHRYMOREF3P_2387 ATP-dependent DNA ligase clustered with Ku protein, LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D CHRYMOREF3P_0677 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CHRYMOREF3P_4504 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CHRYMOREF3P_1450 DNA topoisomerase IB (poxvirus type) K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CHRYMOREF3P_2532 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CHRYMOREF3P_3915 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CHRYMOREF3P_1977 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D CHRYMOREF3P_0811 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CHRYMOREF3P_2074 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CHRYMOREF3P_4203 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CHRYMOREF3P_0177 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CHRYMOREF3P_2279 dinB; DNA polymerase IV 2 K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CHRYMOREF3P_3094 Error-prone repair protein UmuC K03502 umuC; DNA polymerase V
D CHRYMOREF3P_0176 DNA-directed DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D CHRYMOREF3P_4202 DNA-directed DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D CHRYMOREF3P_1898 Regulatory protein RecX K03565 recX; regulatory protein
D CHRYMOREF3P_0436 DNA ligase-associated DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D CHRYMOREF3P_1909 Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CHRYMOREF3P_1907 Ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CHRYMOREF3P_2429 Bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:chrj03029]
D CHRYMOREF3P_3254 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CHRYMOREF3P_0370 infC; protein chain initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CHRYMOREF3P_2456 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D CHRYMOREF3P_2312 tufB; protein chain elongation factor EF-Tu (duplicate of tufA) K02358 tuf; elongation factor Tu
D CHRYMOREF3P_3707 fusA; Elongation factor G K02355 fusA; elongation factor G
D CHRYMOREF3P_3329 fusA; protein chain elongation factor EF-G, GTP-binding K02355 fusA; elongation factor G
D CHRYMOREF3P_0021 era; GTPase Era K03595 era; GTPase
D CHRYMOREF3P_4070 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHRYMOREF3P_1963 tyrS; Tyrosine--tRNA ligase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHRYMOREF3P_2408 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CHRYMOREF3P_2380 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CHRYMOREF3P_3105 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CHRYMOREF3P_2192 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CHRYMOREF3P_2080 AAA family ATPase K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D CHRYMOREF3P_0781 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CHRYMOREF3P_2523 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D CHRYMOREF3P_1815 dnaK; chaperone Hsp70, co-chaperone with DnaJ K04043 dnaK; molecular chaperone DnaK
D CHRYMOREF3P_4361 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE
D CHRYMOREF3P_2220 groL; Cpn60 chaperonin GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHRYMOREF3P_2218 groS; 10 kDa chaperonin 1 K04078 groES; chaperonin GroES
D CHRYMOREF3P_4360 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CHRYMOREF3P_4035 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CHRYMOREF3P_3843 cndB; Chloroacetanilide N-alkylformylase 2, ferredoxin component K22071 FDX2; ferredoxin-2, mitochondrial
D CHRYMOREF3P_2083 Fe-S cluster biogenesis protein NfuA K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
D CHRYMOREF3P_1824 mrp; Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CHRYMOREF3P_2199 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CHRYMOREF3P_4781 SCO family protein K07152 SCO1; protein SCO1
D CHRYMOREF3P_3285 putative Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, copper metallochaperone K07152 SCO1; protein SCO1
D CHRYMOREF3P_2170 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:chrj02000]
D CHRYMOREF3P_3157 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CHRYMOREF3P_2394 ATP-binding cassette subfamily B protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CHRYMOREF3P_2272 ABC-type multidrug transport system fused ATPase/permease subunit K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CHRYMOREF3P_4431 putative enzyme K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CHRYMOREF3P_3188 Peptidase domain-containing ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CHRYMOREF3P_3551 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CHRYMOREF3P_2141 yfmR; Uncharacterized ABC transporter ATP-binding protein YfmR K15738 uup; ABC transport system ATP-binding/permease protein
D CHRYMOREF3P_3878 Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC K02002 proX; glycine betaine/proline transport system substrate-binding protein
D CHRYMOREF3P_3879 Glycine betaine ABC transport system, permease protein OpuAB K02001 proW; glycine betaine/proline transport system permease protein
D CHRYMOREF3P_3880 proV; glycine betaine transporter subunit; ATP-binding compoent of ABC superfamily K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D CHRYMOREF3P_1261 yehW; Osmoprotectant uptake system permease protein yehW K05845 opuC; osmoprotectant transport system substrate-binding protein
D CHRYMOREF3P_1262 yehX; putative transporter subunit: ATP-binding component of ABC superfamily transporter K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CHRYMOREF3P_0118 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CHRYMOREF3P_2643 Phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CHRYMOREF3P_0120 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CHRYMOREF3P_2658 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CHRYMOREF3P_0119 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CHRYMOREF3P_2659 Methionine ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CHRYMOREF3P_1375 metQ; DL-methionine transporter subunit; periplasmic-binding component of ABC superfamily K02073 metQ; D-methionine transport system substrate-binding protein
D CHRYMOREF3P_1374 metI; DL-methionine transporter subunit; membrane component protein of ABC superfamily K02072 metI; D-methionine transport system permease protein
D CHRYMOREF3P_1373 metN; DL-methionine transporter subunit; ATP-binding component of ABC superfamily K02071 metN; D-methionine transport system ATP-binding protein
D CHRYMOREF3P_4471 Hemin ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D CHRYMOREF3P_4472 Hemin ABC transporter, permease protein K25133 hmuU; heme transport system permease protein
D CHRYMOREF3P_4473 ABC-type hemin transport system, ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D CHRYMOREF3P_1116 Iron complex transport system substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D CHRYMOREF3P_0271 ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D CHRYMOREF3P_0269 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CHRYMOREF3P_3247 Transport permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D CHRYMOREF3P_3246 Polysaccharide ABC transporter, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CHRYMOREF3P_0288 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein
D CHRYMOREF3P_3144 Lipopolysaccharide export system permease protein K11720 lptG; lipopolysaccharide export system permease protein
D CHRYMOREF3P_1851 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CHRYMOREF3P_3979 bcrA; Bacitracin transport ATP-binding protein BcrA K20459 nukF; lantibiotic transport system ATP-binding protein
D CHRYMOREF3P_3978 conserved membrane protein of unknown function K20461 nukG; lantibiotic transport system permease protein
D CHRYMOREF3P_4458 gliding motility protein GldF K25151 gldF; gliding motility-associated transport system permease protein
D CHRYMOREF3P_1303 ATP-binding cassette domain-containing protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D CHRYMOREF3P_4459 gliding motility protein GldG K25153 gldG; gliding motility-associatede transport system auxiliary component
D CHRYMOREF3P_3660 Permease K09808 lolC_E; lipoprotein-releasing system permease protein
D CHRYMOREF3P_1704 lolE; Lipoprotein-releasing system transmembrane protein lolE K09808 lolC_E; lipoprotein-releasing system permease protein
D CHRYMOREF3P_0045 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CHRYMOREF3P_4405 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CHRYMOREF3P_2431 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CHRYMOREF3P_0077 ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CHRYMOREF3P_0078 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CHRYMOREF3P_1105 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CHRYMOREF3P_1857 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CHRYMOREF3P_2546 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D CHRYMOREF3P_4349 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D CHRYMOREF3P_4350 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CHRYMOREF3P_4726 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CHRYMOREF3P_0076 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CHRYMOREF3P_1856 putative Uncharacterized ABC transporter ATP-binding protein YhaQ K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CHRYMOREF3P_2545 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CHRYMOREF3P_2693 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CHRYMOREF3P_1904 Multidrug ABC transporter ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CHRYMOREF3P_1905 Putative ABC transport system permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CHRYMOREF3P_1906 yvrO; Uncharacterized ABC transporter ATP-binding protein YvrO K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CHRYMOREF3P_3028 sufC; component of SufBCD complex, ATP-binding component of ABC superfamily K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CHRYMOREF3P_0028 Multidrug resistance protein, MATE family K26939 norM; MATE family, multidrug efflux pump
D CHRYMOREF3P_2375 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CHRYMOREF3P_0465 Putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CHRYMOREF3P_1146 xylE; D-xylose transporter K08138 xylE; MFS transporter, SP family, xylose:H+ symportor
D CHRYMOREF3P_4266 gluP; Glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CHRYMOREF3P_3554 MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CHRYMOREF3P_0703 nupG; Nucleoside permease NupG K11537 xapB; MFS transporter, NHS family, xanthosine permease
D CHRYMOREF3P_2264 kgtP; alpha-ketoglutarate transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D CHRYMOREF3P_1151 Hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D CHRYMOREF3P_0482 MFS transporter, CP family, cyanate transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D CHRYMOREF3P_3123 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CHRYMOREF3P_4611 tetA; Tetracycline resistance protein, class A K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D CHRYMOREF3P_2965 MFS domain-containing protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CHRYMOREF3P_4075 MFS transporter K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein
D CHRYMOREF3P_0433 ytbD; Uncharacterized MFS-type transporter YtbD K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CHRYMOREF3P_4164 Beta-carotene 15,15'-monooxygenase K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D CHRYMOREF3P_1484 Inner membrane component of tripartite multidrug resistance system K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D CHRYMOREF3P_4559 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D CHRYMOREF3P_4790 conserved membrane protein of unknown function K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D CHRYMOREF3P_0744 conserved membrane protein of unknown function K07786 emrY; MFS transporter, DHA2 family, multidrug resistance protein
D CHRYMOREF3P_4867 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D CHRYMOREF3P_0696 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D CHRYMOREF3P_2017 aqpZ; aquaporin K06188 aqpZ; aquaporin Z
D CHRYMOREF3P_3339 glpF; putative glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D CHRYMOREF3P_4386 putative Potassium voltage-gated channel subfamily KQT; potassium channel, VIC family K10716 kch; voltage-gated potassium channel
D CHRYMOREF3P_3018 Inward rectifier potassium channel Irk K08715 IRPC; inward rectifier potassium channel
D CHRYMOREF3P_4294 Putative ammonium transporter MTH_661 K03320 amt; ammonium transporter, Amt family
D CHRYMOREF3P_4755 conserved protein of unknown function K07114 yfbK; Ca-activated chloride channel homolog
D CHRYMOREF3P_1324 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D CHRYMOREF3P_1654 BatB K07114 yfbK; Ca-activated chloride channel homolog
D CHRYMOREF3P_1655 BatA (Bacteroides aerotolerance operon) K07114 yfbK; Ca-activated chloride channel homolog
D CHRYMOREF3P_4538 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D CHRYMOREF3P_2147 Small conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D CHRYMOREF3P_2388 Mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D CHRYMOREF3P_1628 Miniconductance mechanosensitive channel K16053 ybdG; miniconductance mechanosensitive channel
D CHRYMOREF3P_4262 Magnesium transporter MgtE K06213 mgtE; magnesium transporter
D CHRYMOREF3P_1454 Eukaryotic-type low-affinity urea transporter K08717 utp; urea transporter
D CHRYMOREF3P_2421 conserved protein of unknown function K02557 motB; chemotaxis protein MotB
D CHRYMOREF3P_2406 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D CHRYMOREF3P_2932 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D CHRYMOREF3P_2933 Biopolymer transport protein ExbD/TolR; potentially related to transport or biosynthesis of folate K03559 exbD; biopolymer transport protein ExbD
D CHRYMOREF3P_1472 Magnesium transporter CorA K03284 corA; magnesium transporter
D CHRYMOREF3P_4378 conserved membrane protein of unknown function K08994 yneE; ion channel-forming bestrophin family protein
D CHRYMOREF3P_1095 Multidrug transporter K08994 yneE; ion channel-forming bestrophin family protein
D CHRYMOREF3P_1120 Putative membrane protein K08994 yneE; ion channel-forming bestrophin family protein
D CHRYMOREF3P_2945 Predicted membrane protein K08994 yneE; ion channel-forming bestrophin family protein
D CHRYMOREF3P_3277 conserved membrane protein of unknown function K08994 yneE; ion channel-forming bestrophin family protein
D CHRYMOREF3P_3631 conserved membrane protein of unknown function K08994 yneE; ion channel-forming bestrophin family protein
D CHRYMOREF3P_3827 Potassium channel HX13_20290 K24915 TMEM175; TMEM175 potassium channel family protein
D CHRYMOREF3P_0718 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CHRYMOREF3P_2072 OmpA-like domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CHRYMOREF3P_2073 OOP family OmpA-OmpF porin K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CHRYMOREF3P_3412 conserved exported protein of unknown function K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CHRYMOREF3P_3054 Aromatic hydrocarbon degradation protein K06076 fadL; long-chain fatty acid transport protein
D CHRYMOREF3P_1811 TonB-dependent Receptor Plug Domain K19611 fepA; ferric enterobactin receptor
D CHRYMOREF3P_3387 Outer membrane receptor protein involved in Fe transport K19611 fepA; ferric enterobactin receptor
D CHRYMOREF3P_0256 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D CHRYMOREF3P_3291 btuB; Outer membrane cobalamin translocator K16092 btuB; vitamin B12 transporter
D CHRYMOREF3P_4565 susC; TonB-dependent receptor SusC K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CHRYMOREF3P_3873 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D CHRYMOREF3P_3132 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D CHRYMOREF3P_4469 Outer membrane receptor for ferrienterochelin and colicins K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D CHRYMOREF3P_3856 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_4560 Aerobactin siderophore receptor IutA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_4651 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_0079 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_0468 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_1772 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_1844 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_2006 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_2143 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_2602 Catecholate siderophore receptor Fiu K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_2681 Iron complex outermembrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_2741 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_2769 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_2770 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_2772 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_3331 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_3633 Ferric enterobactin receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_0308 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_0535 Energy transducer TonB K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_2089 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_2610 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_4599 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHRYMOREF3P_2050 Heavy metal RND efflux outer membrane protein, CzcC family K15725 czcC; outer membrane protein, heavy metal efflux system
D CHRYMOREF3P_2316 Cobalt-zinc-cadmium efflux system outer membrane protein K15725 czcC; outer membrane protein, heavy metal efflux system
D CHRYMOREF3P_3317 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D CHRYMOREF3P_4000 Outer membrane channel protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_2922 Outer membrane protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_0742 conserved protein of unknown function K12340 tolC; outer membrane protein
D CHRYMOREF3P_0796 Transporter K12340 tolC; outer membrane protein
D CHRYMOREF3P_1486 TolC family protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_4557 conserved exported protein of unknown function K12340 tolC; outer membrane protein
D CHRYMOREF3P_0304 conserved protein of unknown function K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_1379 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_2099 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_2991 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_3783 Efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_4120 NodT family efflux transporter outer membrane factor (OMF) lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_4441 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_4041 Polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D CHRYMOREF3P_1896 Polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D CHRYMOREF3P_2523 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D CHRYMOREF3P_2700 Outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D CHRYMOREF3P_1491 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D CHRYMOREF3P_4572 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D CHRYMOREF3P_2181 aroP; aromatic amino acid transporter K11734 aroP; aromatic amino acid transport protein AroP
D CHRYMOREF3P_3278 czcD; Metal cation efflux system protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CHRYMOREF3P_4367 Zinc permease K16267 zipB; zinc and cadmium transporter
D CHRYMOREF3P_0490 czcA; Cation efflux system protein CzcA K15726 czcA; heavy metal efflux system protein
D CHRYMOREF3P_2049 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D CHRYMOREF3P_2314 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D CHRYMOREF3P_3275 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D CHRYMOREF3P_3319 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D CHRYMOREF3P_0979 emrE; multidrug resistance protein; DLP12 prophage K03297 emrE; small multidrug resistance pump
D CHRYMOREF3P_0019 gdx; Guanidinium exporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CHRYMOREF3P_0509 gdx; Guanidinium exporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CHRYMOREF3P_2046 rhtA; Threonine/homoserine exporter RhtA K11939 rhtA; inner membrane transporter RhtA
D CHRYMOREF3P_1138 L-rhamnose-H+ transport protein K02856 rhaT; L-rhamnose-H+ transport protein
D CHRYMOREF3P_4133 Putative ionic transporter y4hA K07300 chaA; Ca2+:H+ antiporter
D CHRYMOREF3P_3015 Putative ionic transporter y4hA K07300 chaA; Ca2+:H+ antiporter
D CHRYMOREF3P_4510 dctA; C4-dicarboxylic acid, orotate and citrate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D CHRYMOREF3P_2216 C4-dicarboxylate ABC transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D CHRYMOREF3P_4620 nhaA; Na(+)/H(+) antiporter NhaA 2 K03313 nhaA; Na+:H+ antiporter, NhaA family
D CHRYMOREF3P_3666 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D CHRYMOREF3P_1094 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D CHRYMOREF3P_1366 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D CHRYMOREF3P_3093 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D CHRYMOREF3P_3009 nhaP; Na(+)/H(+) antiporter NhaP K03316 nhaP; Na+:H+ antiporter
D CHRYMOREF3P_3595 Potassium transporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D CHRYMOREF3P_3596 Kef-type potassium/proton antiporter accessory protein (CPA2 family) K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D CHRYMOREF3P_1605 Cation:proton antiporter K26730 napA; Na+:H+ antiporter
D CHRYMOREF3P_4314 Cation/H(+) antiporter K26731 CHX; K+:H+ antiporter
D CHRYMOREF3P_4183 Chloride channel protein, CIC family K03281 clcA; chloride channel protein, CIC family
D CHRYMOREF3P_0494 Chloride channel protein K03281 clcA; chloride channel protein, CIC family
D CHRYMOREF3P_0736 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D CHRYMOREF3P_2150 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D CHRYMOREF3P_4525 eriC; Chloride/fluoride channel protein K03281 clcA; chloride channel protein, CIC family
D CHRYMOREF3P_3706 ybaR; Putative sulfate transporter YbaR K03321 TC.SULP; sulfate permease, SulP family
D CHRYMOREF3P_4362 mntH; Divalent metal cation transporter MntH K03322 mntH; manganese transport protein
D CHRYMOREF3P_4745 arsB; Arsenite resistance protein ArsB K03325 ACR3; arsenite transporter
D CHRYMOREF3P_0230 arsB; Arsenite resistance protein ArsB K03325 ACR3; arsenite transporter
D CHRYMOREF3P_4449 Malate permease K24180 mleP; malate permease and related proteins
D CHRYMOREF3P_1989 kup; putative potassium transport system protein kup K03549 kup; KUP system potassium uptake protein
D CHRYMOREF3P_4124 VIT1/CCC1 family predicted Fe2+/Mn2+ transporter K22736 VIT; vacuolar iron transporter family protein
D CHRYMOREF3P_1651 conserved membrane protein of unknown function K05595 marC; multiple antibiotic resistance protein
D CHRYMOREF3P_2794 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CHRYMOREF3P_3777 putative Sugar transporter SemiSWEET K15383 K15383; MtN3 and saliva related transmembrane protein
D CHRYMOREF3P_2403 Energy transducer TonB K03832 tonB; periplasmic protein TonB
D CHRYMOREF3P_3909 conserved exported protein of unknown function K03641 tolB; TolB protein
D CHRYMOREF3P_0054 Pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D CHRYMOREF3P_4165 Membrane fusion protein, multidrug efflux system K03543 emrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_4558 Membrane fusion protein (Multidrug efflux system) K03543 emrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_4789 Membrane fusion protein (Multidrug efflux system) K03543 emrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0743 yibH; Inner membrane protein yibH K03543 emrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_1485 Secretion protein HlyD K03543 emrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0491 Cobalt-zinc-cadmium efflux system membrane fusion protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D CHRYMOREF3P_2048 Efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D CHRYMOREF3P_2315 putative Co/Zn/Cd efflux system membrane fusion protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D CHRYMOREF3P_3276 Efflux transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D CHRYMOREF3P_3318 putative Co/Zn/Cd efflux system membrane fusion protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D CHRYMOREF3P_3781 Efflux transporter, rnd family K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_4118 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0169 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0302 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0795 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_1381 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_2097 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_2989 Membrane fusion protein (Multidrug efflux system) K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_4042 Tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHRYMOREF3P_1895 Polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHRYMOREF3P_2526 Gliding motility protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHRYMOREF3P_4229 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_4566 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_4927 Starch-binding associating with outer membrane K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_0216 Starch-binding associating with outer membrane K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_0316 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_1082 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_1136 Putative outer membrane starch-binding protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_1158 Putative outer membrane starch-binding protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_1188 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_1294 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_1692 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_1716 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_2501 SusD family K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_2776 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_3256 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_3268 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_3524 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHRYMOREF3P_4604 Ribosyl nicotinamide transporter, PnuC-like K03811 pnuC; nicotinamide mononucleotide transporter
D CHRYMOREF3P_0311 Nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D CHRYMOREF3P_2835 Ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CHRYMOREF3P_2834 Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CHRYMOREF3P_3938 Putative Mg2+ transporter-C (MgtC) family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CHRYMOREF3P_2047 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:chrj02044]
D CHRYMOREF3P_4000 Outer membrane channel protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_2922 Outer membrane protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_0742 conserved protein of unknown function K12340 tolC; outer membrane protein
D CHRYMOREF3P_0796 Transporter K12340 tolC; outer membrane protein
D CHRYMOREF3P_1486 TolC family protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_4557 conserved exported protein of unknown function K12340 tolC; outer membrane protein
D CHRYMOREF3P_2592 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CHRYMOREF3P_2368 ComEC family competence protein K02238 comEC; competence protein ComEC
D CHRYMOREF3P_1751 Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CHRYMOREF3P_3922 Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CHRYMOREF3P_4738 Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CHRYMOREF3P_3907 Curli production assembly/transport component CsgF K04338 csgF; curli production assembly/transport component CsgF
D CHRYMOREF3P_3908 Curli production assembly/transport component CsgG K06214 csgG; curli production assembly/transport component CsgG
D CHRYMOREF3P_2768 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CHRYMOREF3P_1503 Preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CHRYMOREF3P_4610 secD; Protein-export membrane protein SecF,Protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D CHRYMOREF3P_2311 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CHRYMOREF3P_3850 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D CHRYMOREF3P_3363 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CHRYMOREF3P_0726 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CHRYMOREF3P_2067 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CHRYMOREF3P_2391 Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D CHRYMOREF3P_2199 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CHRYMOREF3P_4614 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CHRYMOREF3P_3464 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CHRYMOREF3P_0813 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:chrj02042]
D CHRYMOREF3P_0718 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CHRYMOREF3P_2508 Phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:chrj02022]
D CHRYMOREF3P_3135 Two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CHRYMOREF3P_3472 Two-component system phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CHRYMOREF3P_1726 walR; Transcriptional regulatory protein WalR K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CHRYMOREF3P_3952 Osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CHRYMOREF3P_3315 DNA-binding response OmpR family regulator K02483 K02483; two-component system, OmpR family, response regulator
D CHRYMOREF3P_2783 DNA-binding NarL/FixJ family response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D CHRYMOREF3P_4762 Sensor histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D CHRYMOREF3P_2983 DNA-binding response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D CHRYMOREF3P_3377 Two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D CHRYMOREF3P_3373 DNA-binding response regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D CHRYMOREF3P_0364 Two-component sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D CHRYMOREF3P_4068 Histidine kinase/DNA gyrase B/HSP90-like ATPase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D CHRYMOREF3P_1695 Histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CHRYMOREF3P_2901 Histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CHRYMOREF3P_2968 GHKL domain-containing protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CHRYMOREF3P_2906 Two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CHRYMOREF3P_4142 Response regulator transcription factor K02477 K02477; two-component system, LytTR family, response regulator
D CHRYMOREF3P_4684 Response regulator of the LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator
D CHRYMOREF3P_4085 Response regulator transcription factor K02477 K02477; two-component system, LytTR family, response regulator
D CHRYMOREF3P_0151 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CHRYMOREF3P_0849 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CHRYMOREF3P_1024 lytR; Sensory transduction protein lytR K02477 K02477; two-component system, LytTR family, response regulator
D CHRYMOREF3P_2988 Two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D CHRYMOREF3P_3947 Sigma-54-dependent Fis family transcriptional regulator K02481 flgR; two-component system, NtrC family, response regulator
D CHRYMOREF3P_1786 Phytochrome, two-component sensor histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D CHRYMOREF3P_0128 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:chrj02035]
D CHRYMOREF3P_2421 conserved protein of unknown function K02557 motB; chemotaxis protein MotB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:chrj04812]
D CHRYMOREF3P_3065 mreB; cell wall structural complex MreBCD, actin-like component MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CHRYMOREF3P_2799 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CHRYMOREF3P_2798 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CHRYMOREF3P_4021 soj; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CHRYMOREF3P_4022 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:chrj04147]
D CHRYMOREF3P_2170 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CHRYMOREF3P_3381 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHRYMOREF3P_2160 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHRYMOREF3P_2875 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CHRYMOREF3P_2351 pyk; Pyruvate kinase 2 K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CHRYMOREF3P_4894 Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CHRYMOREF3P_0372 Peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CHRYMOREF3P_4913 ahpC; Alkyl hydroperoxide reductase C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CHRYMOREF3P_2220 groL; Cpn60 chaperonin GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHRYMOREF3P_1815 dnaK; chaperone Hsp70, co-chaperone with DnaJ K04043 dnaK; molecular chaperone DnaK
D CHRYMOREF3P_2653 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CHRYMOREF3P_3754 Dipeptidyl-peptidase-4 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CHRYMOREF3P_0516 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CHRYMOREF3P_3581 ptpA; Prolyl tripeptidyl peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CHRYMOREF3P_4418 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CHRYMOREF3P_2488 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CHRYMOREF3P_2312 tufB; protein chain elongation factor EF-Tu (duplicate of tufA) K02358 tuf; elongation factor Tu
D CHRYMOREF3P_3544 Histidine triad (HIT) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CHRYMOREF3P_4390 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHRYMOREF3P_1618 Putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHRYMOREF3P_0060 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_0697 phaA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_3116 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHRYMOREF3P_1595 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CHRYMOREF3P_4012 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CHRYMOREF3P_3038 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CHRYMOREF3P_4639 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CHRYMOREF3P_4633 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CHRYMOREF3P_1765 metC; Cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D CHRYMOREF3P_3865 Fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D CHRYMOREF3P_1676 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CHRYMOREF3P_4883 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D CHRYMOREF3P_1312 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D CHRYMOREF3P_0757 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CHRYMOREF3P_3340 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CHRYMOREF3P_3072 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHRYMOREF3P_1854 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CHRYMOREF3P_3867 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CHRYMOREF3P_0553 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CHRYMOREF3P_2500 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CHRYMOREF3P_4537 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHRYMOREF3P_4904 Hydroxypyruvate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHRYMOREF3P_2598 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHRYMOREF3P_4578 purH; fused IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CHRYMOREF3P_0806 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_1307 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHRYMOREF3P_0705 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CHRYMOREF3P_0894 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CHRYMOREF3P_4324 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CHRYMOREF3P_0435 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CHRYMOREF3P_4086 Outer membrane lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:chrj02048]
D CHRYMOREF3P_1411 Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CHRYMOREF3P_0211 Restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CHRYMOREF3P_1408 Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CHRYMOREF3P_2799 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CHRYMOREF3P_3065 mreB; cell wall structural complex MreBCD, actin-like component MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CHRYMOREF3P_0845 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CHRYMOREF3P_0847 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CHRYMOREF3P_4035 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CHRYMOREF3P_4218 3'-phosphoadenosine 5'-phosphosulfate sulfurtransferase DndC K19170 dndC; DNA sulfur modification protein DndC
D CHRYMOREF3P_4219 DNA sulfur modification protein DndD K19171 dndD; DNA sulfur modification protein DndD
D CHRYMOREF3P_4220 conserved protein of unknown function K19172 dndE; DNA sulfur modification protein DndE
D CHRYMOREF3P_4225 conserved protein of unknown function K19173 dptF; DNA phosphorothioation-dependent restriction protein DptF
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:chrj04090]
D CHRYMOREF3P_3754 Dipeptidyl-peptidase-4 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CHRYMOREF3P_0516 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CHRYMOREF3P_3581 ptpA; Prolyl tripeptidyl peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:chrj01504]
D CHRYMOREF3P_0600 blaB; Metallo-beta-lactamase type 2 K19216 blaIND; metallo-beta-lactamase class B IND [EC:3.5.2.6]
D CHRYMOREF3P_3729 Aminoglycoside adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D CHRYMOREF3P_4611 tetA; Tetracycline resistance protein, class A K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D CHRYMOREF3P_1011 Tetracycline resistance protein K18221 tetX; tetracycline 11a-monooxygenase, tetracycline resistance protein [EC:1.14.13.231]
D CHRYMOREF3P_0447 Chloramphenicol O-acetyltransferase type A K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D CHRYMOREF3P_3070 conserved protein of unknown function K18555 qnr; fluoroquinolone resistance protein
D CHRYMOREF3P_0040 Transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CHRYMOREF3P_0828 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CHRYMOREF3P_2743 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CHRYMOREF3P_1052 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CHRYMOREF3P_1297 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CHRYMOREF3P_3781 Efflux transporter, rnd family K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_4118 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0169 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0302 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0795 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_1381 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_2097 Efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_2989 Membrane fusion protein (Multidrug efflux system) K03585 acrA; membrane fusion protein, multidrug efflux system
D CHRYMOREF3P_0304 conserved protein of unknown function K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_1379 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_2099 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_2991 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_3783 Efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_4120 NodT family efflux transporter outer membrane factor (OMF) lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_4441 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D CHRYMOREF3P_4000 Outer membrane channel protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_2922 Outer membrane protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_0742 conserved protein of unknown function K12340 tolC; outer membrane protein
D CHRYMOREF3P_0796 Transporter K12340 tolC; outer membrane protein
D CHRYMOREF3P_1486 TolC family protein K12340 tolC; outer membrane protein
D CHRYMOREF3P_4557 conserved exported protein of unknown function K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:chrj00537]
D CHRYMOREF3P_0553 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CHRYMOREF3P_2500 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CHRYMOREF3P_2090 treA; Periplasmic trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D CHRYMOREF3P_0372 Peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CHRYMOREF3P_1155 idnO; 5-keto-D-gluconate 5-reductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D CHRYMOREF3P_3895 yvgN; Glyoxal reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D CHRYMOREF3P_0579 yvgN; Glyoxal reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D CHRYMOREF3P_2742 yliI; Aldose sugar dehydrogenase YliI K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D CHRYMOREF3P_4031 FAD-binding oxidoreductase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D CHRYMOREF3P_0502 Short chain dehydrogenase K11166 DHRS7B; dehydrogenase/reductase SDR family member 7B [EC:1.1.-.-]
D CHRYMOREF3P_0625 F420_oxidored domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D CHRYMOREF3P_1281 NADPH:quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CHRYMOREF3P_3890 mdaB; NADPH quinone reductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D CHRYMOREF3P_1754 namA; NADPH dehydrogenase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D CHRYMOREF3P_3791 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CHRYMOREF3P_4295 azoR; FMN-dependent NADH-azoreductase 1 K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CHRYMOREF3P_0330 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CHRYMOREF3P_0881 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CHRYMOREF3P_1669 Thioredoxin reductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D CHRYMOREF3P_2775 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CHRYMOREF3P_4347 msrAB; Peptide methionine sulfoxide reductase MsrA / Peptide methionine sulfoxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D CHRYMOREF3P_3110 Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CHRYMOREF3P_4340 Cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CHRYMOREF3P_0010 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CHRYMOREF3P_3289 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CHRYMOREF3P_1808 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CHRYMOREF3P_0319 thcF; Non-heme haloperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D CHRYMOREF3P_2927 bcp; Putative peroxiredoxin bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CHRYMOREF3P_1017 tpx; lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CHRYMOREF3P_1041 tpx; lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CHRYMOREF3P_2146 Peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CHRYMOREF3P_4479 ohr; Organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D CHRYMOREF3P_0917 Organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D CHRYMOREF3P_3118 osmC; Peroxiredoxin OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D CHRYMOREF3P_2692 Putative iron-dependent peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D CHRYMOREF3P_3831 conserved protein of unknown function K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CHRYMOREF3P_4573 yhhW; Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CHRYMOREF3P_1363 Pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CHRYMOREF3P_0460 L-lysine 4-hydroxylase K20157 mppO; enduracididine beta-hydroxylase [EC:1.14.11.40]
D CHRYMOREF3P_4173 hmp; Flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D CHRYMOREF3P_0463 alcA; Alcaligin biosynthesis enzyme K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D CHRYMOREF3P_0859 Ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CHRYMOREF3P_3449 Ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CHRYMOREF3P_4529 Arsenate reductase, glutaredoxin family K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CHRYMOREF3P_1087 Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CHRYMOREF3P_4746 Arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CHRYMOREF3P_0232 Arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CHRYMOREF3P_2892 Radical_SAM domain-containing protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]
D CHRYMOREF3P_1048 pcm; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CHRYMOREF3P_0254 Trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D CHRYMOREF3P_4636 argF; N-acetylornithine carbamoyltransferase K13043 argF; N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11]
D CHRYMOREF3P_3740 GCN5-related N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D CHRYMOREF3P_0457 paiA; Spermidine/spermine N(1)-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D CHRYMOREF3P_0825 Galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CHRYMOREF3P_4612 N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D CHRYMOREF3P_2061 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CHRYMOREF3P_3894 yjaB; Peptidyl-lysine N-acetyltransferase YjaB K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D CHRYMOREF3P_1960 GNAT family N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D CHRYMOREF3P_1090 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D CHRYMOREF3P_2825 aat; Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D CHRYMOREF3P_3124 1,4-beta-mannosyl-N-acetylglucosamine phosphorylase K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D CHRYMOREF3P_4135 conserved protein of unknown function K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D CHRYMOREF3P_3458 bshA; N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D CHRYMOREF3P_2174 Deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D CHRYMOREF3P_2890 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CHRYMOREF3P_4123 lgt; Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CHRYMOREF3P_4540 lgt; Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CHRYMOREF3P_0112 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CHRYMOREF3P_2338 Reverse transcriptase domain-containing protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CHRYMOREF3P_2847 Macro domain-containing protein LIC_13295 K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D CHRYMOREF3P_2282 pnbA; Carboxylic ester hydrolase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D CHRYMOREF3P_4547 4-hydroxybenzoyl-CoA thioesterase family active site K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CHRYMOREF3P_2026 Acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CHRYMOREF3P_2547 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CHRYMOREF3P_2962 Acyl-CoA thioester hydrolase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CHRYMOREF3P_1841 Protein-tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D CHRYMOREF3P_3621 Phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D CHRYMOREF3P_3672 tatD; 3'-5' ssDNA/RNA exonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CHRYMOREF3P_4007 Putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CHRYMOREF3P_2702 Putative deoxyribonuclease YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CHRYMOREF3P_3977 Uncharacterized endonuclease HI_1296 K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CHRYMOREF3P_1625 Alpha/beta hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D CHRYMOREF3P_0081 Lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CHRYMOREF3P_1216 Lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CHRYMOREF3P_1504 Lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CHRYMOREF3P_2369 Alpha-mannosidase K15538 MANEA; glycoprotein endo-alpha-1,2-mannosidase [EC:3.2.1.130]
D CHRYMOREF3P_4570 susA; Neopullulanase SusA K21575 susA; neopullulanase [EC:3.2.1.135]
D CHRYMOREF3P_1162 Glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D CHRYMOREF3P_0574 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D CHRYMOREF3P_4477 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CHRYMOREF3P_3623 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CHRYMOREF3P_2553 Polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CHRYMOREF3P_0031 Xylanase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CHRYMOREF3P_4089 Glycosyl transferase family 2 K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CHRYMOREF3P_2399 bshB; N-acetyl-alpha-D-glucosaminyl L-malate deacetylase 1 K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D CHRYMOREF3P_3302 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CHRYMOREF3P_2066 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CHRYMOREF3P_4774 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CHRYMOREF3P_3677 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CHRYMOREF3P_1659 MoxR-like ATPase in aerotolerance operon K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CHRYMOREF3P_3422 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CHRYMOREF3P_1672 ohyA; Oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D CHRYMOREF3P_4539 NAD(P)H-hydrate epimerase,ADP-dependent (S)-NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CHRYMOREF3P_1140 yesW; Rhamnogalacturonan endolyase YesW K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D CHRYMOREF3P_2471 icmF; Isobutyryl-CoA mutase / P-loop GTPase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D CHRYMOREF3P_0767 cphA; Cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D CHRYMOREF3P_3899 Peptidoglycan synthetase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D CHRYMOREF3P_0116 Cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CHRYMOREF3P_3280 ziaA; Zinc-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D CHRYMOREF3P_3260 bshC; Putative cysteine ligase BshC K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D CHRYMOREF3P_0706 Electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CHRYMOREF3P_1612 yaeR; putative S-C lyase K08234 yaeR; glyoxylase I family protein
D CHRYMOREF3P_0030 Pyridoxal phosphate homeostasis protein K06997 yggS; PLP dependent protein
D CHRYMOREF3P_0984 Pyridoxal phosphate homeostasis protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CHRYMOREF3P_1974 conserved membrane protein of unknown function K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D CHRYMOREF3P_4583 Ubiquinone biosynthesis protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
D CHRYMOREF3P_2084 FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D CHRYMOREF3P_4574 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D CHRYMOREF3P_1368 mhqO; Putative ring-cleaving dioxygenase MhqO K15975 K15975; glyoxalase family protein
D CHRYMOREF3P_1370 mhqO; Putative ring-cleaving dioxygenase MhqO K15975 K15975; glyoxalase family protein
D CHRYMOREF3P_4861 DoxX family protein K15977 K15977; putative oxidoreductase
D CHRYMOREF3P_0022 DoxX family protein K15977 K15977; putative oxidoreductase
D CHRYMOREF3P_0537 DoxX family membrane protein K15977 K15977; putative oxidoreductase
D CHRYMOREF3P_1360 Putative oxidoreductase K15977 K15977; putative oxidoreductase
D CHRYMOREF3P_1805 DoxX protein K15977 K15977; putative oxidoreductase
D CHRYMOREF3P_2648 DoxX family protein K15977 K15977; putative oxidoreductase
D CHRYMOREF3P_4065 Phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D CHRYMOREF3P_1367 Phospholipase K06999 K06999; phospholipase/carboxylesterase
D CHRYMOREF3P_2801 yphP; Bacillithiol system oxidoreductase, YphP/YqiW family K26958 brxA_B; bacilliredoxin
D CHRYMOREF3P_0409 ytxJ; Bacillithiol system redox-active protein YtxJ K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CHRYMOREF3P_1756 Barnase inhibitor K03623 yhcO; ribonuclease inhibitor
D CHRYMOREF3P_1283 cspC; stress protein, member of the CspA-family K03704 cspA; cold shock protein
D CHRYMOREF3P_0867 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D CHRYMOREF3P_0132 Metallo-beta-lactamase family protein, RNA-specific K07576 K07576; metallo-beta-lactamase family protein
D CHRYMOREF3P_0438 DNA ligase-associated DEXH box helicase K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D CHRYMOREF3P_1056 Heat shock protein HslJ K03668 hslJ; heat shock protein HslJ
D CHRYMOREF3P_3778 Heat-shock protein K03668 hslJ; heat shock protein HslJ
D CHRYMOREF3P_0717 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CHRYMOREF3P_2004 Trigger factor K03545 tig; trigger factor
D CHRYMOREF3P_1459 ureE; Urease accessory protein UreE K03187 ureE; urease accessory protein
D CHRYMOREF3P_1458 ureF; Urease accessory protein UreF K03188 ureF; urease accessory protein
D CHRYMOREF3P_1457 ureG; Urease accessory protein UreG K03189 ureG; urease accessory protein
D CHRYMOREF3P_1456 ureD; Urease accessory protein UreD K03190 ureD; urease accessory protein
D CHRYMOREF3P_3411 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CHRYMOREF3P_2997 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein
D CHRYMOREF3P_3825 Putative redox protein K07397 yhfA; putative redox protein
D CHRYMOREF3P_3424 yhfA; Protein YhfA K07397 yhfA; putative redox protein
C 99976 Replication and repair
D CHRYMOREF3P_2172 DNA base-flipping protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D CHRYMOREF3P_0588 Putative restriction endonuclease K07454 K07454; putative restriction endonuclease
D CHRYMOREF3P_4254 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D CHRYMOREF3P_0047 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D CHRYMOREF3P_0246 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D CHRYMOREF3P_3314 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D CHRYMOREF3P_2870 conserved protein of unknown function K07460 yraN; putative endonuclease
D CHRYMOREF3P_1418 Excinuclease ABC, C subunit-like K07461 K07461; putative endonuclease
D CHRYMOREF3P_1757 protein of unknown function K07461 K07461; putative endonuclease
D CHRYMOREF3P_1918 Putative endonuclease K07461 K07461; putative endonuclease
D CHRYMOREF3P_3023 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D CHRYMOREF3P_1538 conserved protein of unknown function K06909 xtmB; phage terminase large subunit
D CHRYMOREF3P_4541 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D CHRYMOREF3P_2978 DNA_pol_B_exo2 domain-containing protein K07501 K07501; 3'-5' exonuclease
D CHRYMOREF3P_0266 transposase K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D CHRYMOREF3P_4112 Rhodanese-related sulfurtransferase K03972 pspE; phage shock protein E
D CHRYMOREF3P_2722 Rhodanese domain-containing protein K03972 pspE; phage shock protein E
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CHRYMOREF3P_4606 mtrA; Methylthioribose transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CHRYMOREF3P_0688 Amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CHRYMOREF3P_2680 Amino acid/polyamine/organocation transporter (APC superfamily) K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CHRYMOREF3P_0956 Amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CHRYMOREF3P_2215 citN; Citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D CHRYMOREF3P_3745 Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CHRYMOREF3P_3747 Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CHRYMOREF3P_3748 Proton-dependent oligopeptide transporter, POT family K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CHRYMOREF3P_4003 pit; putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CHRYMOREF3P_3583 Low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CHRYMOREF3P_0629 Sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CHRYMOREF3P_1789 yflS; Putative malate transporter YflS K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
D CHRYMOREF3P_4194 Nitric oxide-dependent regulator DnrN or NorA K07322 ytfE; regulator of cell morphogenesis and NO signaling
D CHRYMOREF3P_4779 Nitric oxide-dependent regulator DnrN or NorA K07322 ytfE; regulator of cell morphogenesis and NO signaling
D CHRYMOREF3P_4256 DNA invertase Pin-like site-specific DNA recombinase K06400 spoIVCA; site-specific DNA recombinase
D CHRYMOREF3P_4796 Resolvase, N terminal domain K06400 spoIVCA; site-specific DNA recombinase
D CHRYMOREF3P_3465 Peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D CHRYMOREF3P_3710 yceD; General stress protein 16U K05795 terD; tellurium resistance protein TerD
D CHRYMOREF3P_1973 Chemical-damaging agent resistance protein C K05795 terD; tellurium resistance protein TerD
D CHRYMOREF3P_3713 Tellurium resistance protein TerD K05791 terZ; tellurium resistance protein TerZ
D CHRYMOREF3P_3857 cstA; Peptide transporter CstA K06200 cstA; carbon starvation protein
D CHRYMOREF3P_0861 typA; GTP-binding protein TypA/BipA homolog K06207 typA; GTP-binding protein
D CHRYMOREF3P_0783 HPP family K07168 K07168; CBS domain-containing membrane protein
D CHRYMOREF3P_0732 phoH; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D CHRYMOREF3P_2554 Cell envelope biogenesis protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D CHRYMOREF3P_2027 Outer membrane protein H precursor K06142 hlpA; outer membrane protein
D CHRYMOREF3P_2521 Outer membrane protein H precursor K06142 hlpA; outer membrane protein
D CHRYMOREF3P_2138 Glycoside hydrolase K07273 acm; lysozyme
D CHRYMOREF3P_1106 HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D CHRYMOREF3P_3999 Macrolide-specific efflux protein MacA K02005 ABC.CD.TX; HlyD family secretion protein
D CHRYMOREF3P_1903 Membrane fusion efflux protein K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D CHRYMOREF3P_4447 cutC; Copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D CHRYMOREF3P_0750 apaG; Protein ApaG K06195 apaG; ApaG protein
D CHRYMOREF3P_4475 Hemin transport protein HmuS K07225 hmuS; putative hemin transport protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CHRYMOREF3P_2784 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D CHRYMOREF3P_3511 caiE; Carnitine operon protein CaiE K02617 paaY; phenylacetic acid degradation protein
D CHRYMOREF3P_1832 BON domain-containing protein K04065 osmY; hyperosmotically inducible periplasmic protein
D CHRYMOREF3P_2979 csaA; putative chaperone CsaA K06878 K06878; tRNA-binding protein
D CHRYMOREF3P_4170 Globin K06886 glbN; hemoglobin
D CHRYMOREF3P_3016 Sec-independent protein translocase TatC K06886 glbN; hemoglobin
D CHRYMOREF3P_4921 Patatin K07001 K07001; NTE family protein
D CHRYMOREF3P_1306 rssA; NTE family protein rssA K07001 K07001; NTE family protein
D CHRYMOREF3P_2428 Patatin K07001 K07001; NTE family protein
D CHRYMOREF3P_2880 Patatin K07001 K07001; NTE family protein
D CHRYMOREF3P_3708 Phosphoglycolate phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D CHRYMOREF3P_0025 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D CHRYMOREF3P_2584 Noncanonical pyrimidine nucleotidase, YjjG family K07025 K07025; putative hydrolase of the HAD superfamily
D CHRYMOREF3P_3030 sufB; component of SufBCD complex K09014 sufB; Fe-S cluster assembly protein SufB
D CHRYMOREF3P_3027 Iron-sulfur cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CHRYMOREF3P_4619 Ribonuclease BN K07058 K07058; membrane protein
D CHRYMOREF3P_2191 Membrane protein K07058 K07058; membrane protein
D CHRYMOREF3P_2918 Uncharacterized SufE-like protein R01000 K02426 sufE; cysteine desulfuration protein SufE
D CHRYMOREF3P_3306 conserved protein of unknown function K07146 K07146; UPF0176 protein
D CHRYMOREF3P_1003 VOC family protein K04750 phnB; PhnB protein
D CHRYMOREF3P_1098 PhnB protein K04750 phnB; PhnB protein
D CHRYMOREF3P_4703 NADPH-dependent FMN reductase K11811 arsH; arsenical resistance protein ArsH
D CHRYMOREF3P_1740 LemA family protein K03744 lemA; LemA protein
D CHRYMOREF3P_3599 LemA family protein K03744 lemA; LemA protein
D CHRYMOREF3P_2923 SprT-like family K02742 sprT; SprT protein
D CHRYMOREF3P_0274 SanA protein K03748 sanA; SanA protein
D CHRYMOREF3P_2578 SanA protein K03748 sanA; SanA protein
D CHRYMOREF3P_4354 Alkaline phosphatase K03975 dedA; membrane-associated protein
D CHRYMOREF3P_1350 Phage holin family protein K08972 K08972; putative membrane protein
D CHRYMOREF3P_3881 conserved membrane protein of unknown function K08987 K08987; putative membrane protein
D CHRYMOREF3P_3394 conserved protein of unknown function K08989 K08989; putative membrane protein
D CHRYMOREF3P_3590 conserved protein of unknown function K09858 K09858; SEC-C motif domain protein
D CHRYMOREF3P_3837 yjdM; Protein YjdM K06193 phnA; protein PhnA
D CHRYMOREF3P_1058 conserved membrane protein of unknown function K21741 rclC; reactive chlorine resistance protein C
D CHRYMOREF3P_4346 Putative membrane protein YkgB K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D CHRYMOREF3P_0924 conserved exported protein of unknown function K06867 K06867; uncharacterized protein
D CHRYMOREF3P_2292 ANK_REP_REGION domain-containing protein K06867 K06867; uncharacterized protein
D CHRYMOREF3P_3597 TPM_phosphatase domain-containing protein K06872 K06872; uncharacterized protein
D CHRYMOREF3P_1866 Deoxyguanosinetriphosphate triphosphohydrolase K06885 K06885; uncharacterized protein
D CHRYMOREF3P_3862 Esterase K06889 K06889; uncharacterized protein
D CHRYMOREF3P_0583 Alpha/beta hydrolase K06889 K06889; uncharacterized protein
D CHRYMOREF3P_1196 conserved exported protein of unknown function K06889 K06889; uncharacterized protein
D CHRYMOREF3P_2559 putative Esterase EstD K06889 K06889; uncharacterized protein
D CHRYMOREF3P_3502 Alpha/beta hydrolase K06889 K06889; uncharacterized protein
D CHRYMOREF3P_4650 SnoaL-like domain-containing protein K06893 K06893; uncharacterized protein
D CHRYMOREF3P_1239 GPW_gp25 domain-containing protein K06903 W; Bacteriophage baseplate protein W
D CHRYMOREF3P_1246 Phage tail protein K06907 FI; Bacteriophage tail sheath protein
D CHRYMOREF3P_1248 Phage_sheath_1C domain-containing protein K06907 FI; Bacteriophage tail sheath protein
D CHRYMOREF3P_0445 PPC domain-containing protein K06934 K06934; uncharacterized protein
D CHRYMOREF3P_3019 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D CHRYMOREF3P_1914 HD domain-containing protein K06950 K06950; uncharacterized protein
D CHRYMOREF3P_0434 Putative phosphoesterase K06953 K06953; uncharacterized protein
D CHRYMOREF3P_3653 putative membrane protease YugP K06973 K06973; uncharacterized protein
D CHRYMOREF3P_3824 N-acetyltransferase domain-containing protein K06975 K06975; uncharacterized protein
D CHRYMOREF3P_3830 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D CHRYMOREF3P_1032 Acetyltransferase K06975 K06975; uncharacterized protein
D CHRYMOREF3P_1369 N-acetyltransferase domain-containing protein K06975 K06975; uncharacterized protein
D CHRYMOREF3P_3416 N-acetyltransferase K06975 K06975; uncharacterized protein
D CHRYMOREF3P_1835 cocE; Cocaine esterase K06978 K06978; uncharacterized protein
D CHRYMOREF3P_0955 Hydrolase K06978 K06978; uncharacterized protein
D CHRYMOREF3P_1955 Glyoxalase family protein K06996 K06996; uncharacterized protein
D CHRYMOREF3P_2536 Glycerol acyltransferase K07003 K07003; uncharacterized protein
D CHRYMOREF3P_0586 Glyoxalase K07032 K07032; uncharacterized protein
D CHRYMOREF3P_1007 Glyoxalase/bleomycin resistance/extradiol dioxygenase family protein K07032 K07032; uncharacterized protein
D CHRYMOREF3P_1008 Glyoxalase/bleomycin resistance/extradiol dioxygenase family protein K07032 K07032; uncharacterized protein
D CHRYMOREF3P_1100 Glyoxalase K07032 K07032; uncharacterized protein
D CHRYMOREF3P_3034 Metalloprotease K07054 K07054; uncharacterized protein
D CHRYMOREF3P_2734 Metalloprotease K07054 K07054; uncharacterized protein
D CHRYMOREF3P_0785 Cell division inhibitor K07071 K07071; uncharacterized protein
D CHRYMOREF3P_1313 Cell division inhibitor K07071 K07071; uncharacterized protein
D CHRYMOREF3P_4275 Nucleotidyltransferase K07074 K07074; uncharacterized protein
D CHRYMOREF3P_4277 Nucleotidyltransferase domain-containing protein K07074 K07074; uncharacterized protein
D CHRYMOREF3P_0503 FAD-binding dehydrogenase K07077 K07077; uncharacterized protein
D CHRYMOREF3P_4437 putative membrane transporter protein K07090 K07090; uncharacterized protein
D CHRYMOREF3P_4465 putative membrane transporter protein K07090 K07090; uncharacterized protein
D CHRYMOREF3P_1610 putative membrane transporter protein K07090 K07090; uncharacterized protein
D CHRYMOREF3P_0536 Siroheme synthase / Precorrin-2 oxidase K07090 K07090; uncharacterized protein
D CHRYMOREF3P_0011 Twin-arginine translocation pathway signal protein K07093 K07093; uncharacterized protein
D CHRYMOREF3P_3616 Phosphoesterase K07095 K07095; uncharacterized protein
D CHRYMOREF3P_4514 Phosphoesterase K07098 K07098; uncharacterized protein
D CHRYMOREF3P_4439 Sulf_transp domain-containing protein K07112 K07112; uncharacterized protein
D CHRYMOREF3P_4440 Sulf_transp domain-containing protein K07112 K07112; uncharacterized protein
D CHRYMOREF3P_3722 Histidine kinase K07118 K07118; uncharacterized protein
D CHRYMOREF3P_0842 Short-chain dehydrogenase K07124 K07124; uncharacterized protein
D CHRYMOREF3P_4389 conserved protein of unknown function K07164 K07164; uncharacterized protein
D CHRYMOREF3P_0704 BFN domain-containing protein K08999 K08999; uncharacterized protein
D CHRYMOREF3P_1010 conserved protein of unknown function K09003 K09003; uncharacterized protein
D CHRYMOREF3P_2800 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D CHRYMOREF3P_3731 conserved protein of unknown function K09164 K09164; uncharacterized protein
D CHRYMOREF3P_4872 conserved exported protein of unknown function K09702 K09702; uncharacterized protein
D CHRYMOREF3P_3126 Metal-independent alpha-mannosidase K09704 K09704; uncharacterized protein
D CHRYMOREF3P_3688 conserved protein of unknown function K09776 K09776; uncharacterized protein
D CHRYMOREF3P_3324 conserved exported protein of unknown function K09780 K09780; uncharacterized protein
D CHRYMOREF3P_4358 yedI; Inner membrane protein YedI K09781 K09781; uncharacterized protein
D CHRYMOREF3P_2632 putative Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, membrane copper tolerance protein K09792 K09792; uncharacterized protein
D CHRYMOREF3P_1630 conserved membrane protein of unknown function K09793 K09793; uncharacterized protein
D CHRYMOREF3P_3454 SIMPL domain-containing protein K09797 K09797; uncharacterized protein
D CHRYMOREF3P_0209 HARE-HTH domain-containing protein K09805 K09805; uncharacterized protein
D CHRYMOREF3P_4080 conserved exported protein of unknown function K09807 K09807; uncharacterized protein
D CHRYMOREF3P_0799 cvfB; Conserved virulence factor B K00243 K00243; uncharacterized protein
D CHRYMOREF3P_0835 Peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D CHRYMOREF3P_1287 conserved protein of unknown function K09927 K09927; uncharacterized protein
D CHRYMOREF3P_4885 conserved protein of unknown function K09930 K09930; uncharacterized protein
D CHRYMOREF3P_0261 conserved protein of unknown function K09946 K09946; uncharacterized protein
D CHRYMOREF3P_2746 conserved protein of unknown function K09954 K09954; uncharacterized protein
D CHRYMOREF3P_1782 conserved protein of unknown function K09957 K09957; uncharacterized protein
D CHRYMOREF3P_3716 conserved protein of unknown function K09958 K09958; uncharacterized protein
D CHRYMOREF3P_1712 conserved protein of unknown function K09959 K09959; uncharacterized protein
D CHRYMOREF3P_4764 Acetyltransferase K09964 K09964; uncharacterized protein
D CHRYMOREF3P_2651 TraB/GumN family protein K09973 K09973; uncharacterized protein
D CHRYMOREF3P_0831 Prolyl 4-hydroxylase subunit alpha K09990 K09990; uncharacterized protein
D CHRYMOREF3P_4002 Phosphate transport regulator (distant homolog of PhoU) K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 11, 2024