+D GENES KO #

  KEGG Orthology (KO) - Conchiformibius kuhniae

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ckh00010] D LVJ77_06750 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D LVJ77_07975 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LVJ77_08290 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LVJ77_04290 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LVJ77_02030 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_06370 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_08345 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D LVJ77_06880 NADP-dependent oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D LVJ77_10950 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] C 00020 Citrate cycle (TCA cycle) [PATH:ckh00020] D LVJ77_02120 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D LVJ77_02030 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_06370 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_02175 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D LVJ77_02170 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit C 00030 Pentose phosphate pathway [PATH:ckh00030] D LVJ77_09620 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LVJ77_06745 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D LVJ77_03460 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D LVJ77_00995 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D LVJ77_01380 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D LVJ77_10675 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LVJ77_06690 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] C 00040 Pentose and glucuronate interconversions D LVJ77_07680 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] C 00051 Fructose and mannose metabolism [PATH:ckh00051] D LVJ77_02895 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D LVJ77_06265 SDR family oxidoreductase K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435] D LVJ77_06270 amidohydrolase family protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120] D LVJ77_06295 SDR family oxidoreductase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434] D LVJ77_05545 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:ckh00052] D LVJ77_10950 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D LVJ77_00070 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D LVJ77_07680 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LVJ77_06750 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:ckh00500] D LVJ77_07680 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LVJ77_06750 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ckh00520] D LVJ77_05850 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D LVJ77_07640 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LVJ77_06865 HAD family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D LVJ77_08530 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D LVJ77_03465 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D LVJ77_07670 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LVJ77_11275 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D LVJ77_11300 pseF; pseudaminic acid cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] D LVJ77_06750 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D LVJ77_07680 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LVJ77_00070 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D LVJ77_05545 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D LVJ77_02895 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D LVJ77_04155 2Fe-2S iron-sulfur cluster-binding protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] C 00620 Pyruvate metabolism [PATH:ckh00620] D LVJ77_02030 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_06370 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_08345 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D LVJ77_06880 NADP-dependent oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D LVJ77_00935 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ77_04290 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LVJ77_03585 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LVJ77_03565 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LVJ77_05405 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D LVJ77_02075 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ckh00630] D LVJ77_02075 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ77_05715 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LVJ77_07840 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D LVJ77_02030 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_06370 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_08440 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:ckh00640] D LVJ77_00935 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ77_02030 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_06370 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_03585 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LVJ77_03565 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LVJ77_01780 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D LVJ77_02255 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:ckh00650] D LVJ77_02075 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ77_02175 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D LVJ77_02170 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D LVJ77_02085 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D LVJ77_00970 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism D LVJ77_00970 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00562 Inositol phosphate metabolism [PATH:ckh00562] D LVJ77_02105 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D LVJ77_05080 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ckh00190] D LVJ77_09790 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D LVJ77_09800 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D LVJ77_09830 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D LVJ77_09850 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D LVJ77_09855 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D LVJ77_09860 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D LVJ77_09870 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D LVJ77_09890 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D LVJ77_02175 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D LVJ77_02170 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D LVJ77_03530 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D LVJ77_03540 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D LVJ77_11915 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D LVJ77_00890 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D LVJ77_00865 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D LVJ77_03170 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D LVJ77_06450 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:ckh00710] D LVJ77_07975 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LVJ77_00995 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] C 00720 Other carbon fixation pathways [PATH:ckh00720] D LVJ77_02175 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D LVJ77_02170 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D LVJ77_02075 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ77_03585 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LVJ77_03565 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LVJ77_02025 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D LVJ77_00935 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:ckh00680] D LVJ77_00935 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ77_08290 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LVJ77_11575 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:ckh00910] D LVJ77_07965 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D LVJ77_05715 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LVJ77_05815 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:ckh00920] D LVJ77_00515 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D LVJ77_00470 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D LVJ77_02420 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ckh00061] D LVJ77_03585 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LVJ77_03565 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LVJ77_08940 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D LVJ77_10590 acyl carrier protein K02078 acpP; acyl carrier protein D LVJ77_10595 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D LVJ77_04715 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LVJ77_05060 StlD/DarB family beta-ketosynthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LVJ77_10880 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D LVJ77_04720 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ77_10865 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ77_08445 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LVJ77_02230 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:ckh00071] D LVJ77_02075 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ77_02230 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LVJ77_08345 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D LVJ77_06880 NADP-dependent oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ckh00561] D LVJ77_01625 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D LVJ77_09085 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D LVJ77_06675 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LVJ77_00720 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:ckh00564] D LVJ77_01630 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D LVJ77_06675 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LVJ77_11360 adenylyltransferase/cytidyltransferase family protein K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] D LVJ77_00720 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D LVJ77_01080 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D LVJ77_08400 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D LVJ77_10050 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D LVJ77_05350 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D LVJ77_11570 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D LVJ77_10720 phosphatase PAP2 family protein K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] D LVJ77_00980 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase family protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ckh00230] D LVJ77_01710 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D LVJ77_06755 NUDIX domain-containing protein K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D LVJ77_10675 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LVJ77_03240 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D LVJ77_04445 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D LVJ77_02750 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D LVJ77_02110 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D LVJ77_03245 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D LVJ77_11800 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LVJ77_00825 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D LVJ77_04360 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D LVJ77_01905 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D LVJ77_02195 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D LVJ77_01690 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D LVJ77_01045 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D LVJ77_06810 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D LVJ77_00400 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D LVJ77_05890 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] C 00240 Pyrimidine metabolism [PATH:ckh00240] D LVJ77_04240 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D LVJ77_04245 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D LVJ77_00180 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D LVJ77_08205 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D LVJ77_09115 Maf family nucleotide pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D LVJ77_04550 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D LVJ77_04505 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D LVJ77_00825 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D LVJ77_04360 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D LVJ77_05010 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D LVJ77_11720 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D LVJ77_01435 hypothetical protein K00943 tmk; dTMP kinase [EC:2.7.4.9] D LVJ77_06525 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D LVJ77_02665 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D LVJ77_08980 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ckh00250] D LVJ77_03245 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D LVJ77_04240 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D LVJ77_04245 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D LVJ77_11625 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D LVJ77_05715 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LVJ77_07640 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:ckh00260] D LVJ77_09675 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LVJ77_01815 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D LVJ77_08290 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LVJ77_11575 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D LVJ77_08980 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D LVJ77_07840 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D LVJ77_02030 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_06370 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_08440 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D LVJ77_10050 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D LVJ77_01220 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D LVJ77_11235 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D LVJ77_05610 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:ckh00270] D LVJ77_00515 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D LVJ77_05665 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D LVJ77_11250 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D LVJ77_00680 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D LVJ77_03120 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D LVJ77_06840 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ77_00685 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D LVJ77_09675 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LVJ77_00470 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D LVJ77_02420 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D LVJ77_05125 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D LVJ77_11235 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] C 00280 Valine, leucine and isoleucine degradation [PATH:ckh00280] D LVJ77_02030 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_06370 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_02085 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D LVJ77_02075 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ckh00290] D LVJ77_01220 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D LVJ77_00970 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D LVJ77_00500 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] C 00300 Lysine biosynthesis [PATH:ckh00300] D LVJ77_09675 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LVJ77_01675 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LVJ77_08315 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D LVJ77_07020 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D LVJ77_05290 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D LVJ77_01330 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LVJ77_00245 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ckh00310] D LVJ77_02120 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D LVJ77_02030 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_06370 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_02075 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ77_11235 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] C 00220 Arginine biosynthesis [PATH:ckh00220] D LVJ77_05715 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LVJ77_00545 hypothetical protein K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D LVJ77_10460 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D LVJ77_05290 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:ckh00330] D LVJ77_05665 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D LVJ77_11250 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D LVJ77_10400 twin-arginine translocation pathway signal K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6] D LVJ77_08380 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D LVJ77_11625 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] C 00340 Histidine metabolism [PATH:ckh00340] D LVJ77_09030 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D LVJ77_10350 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D LVJ77_06480 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D LVJ77_06485 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D LVJ77_09215 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D LVJ77_09220 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D LVJ77_11150 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D LVJ77_11145 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LVJ77_06330 hypothetical protein K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D LVJ77_06355 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] C 00350 Tyrosine metabolism [PATH:ckh00350] D LVJ77_11145 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LVJ77_08345 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D LVJ77_06880 NADP-dependent oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D LVJ77_06040 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] C 00360 Phenylalanine metabolism [PATH:ckh00360] D LVJ77_11145 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LVJ77_09740 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00380 Tryptophan metabolism [PATH:ckh00380] D LVJ77_02120 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D LVJ77_02030 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_06370 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_02075 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ckh00400] D LVJ77_08065 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D LVJ77_11445 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D LVJ77_11140 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D LVJ77_11440 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D LVJ77_09440 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D LVJ77_10305 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D LVJ77_05610 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D LVJ77_04435 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D LVJ77_11145 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:ckh00410] D LVJ77_01060 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D LVJ77_10400 twin-arginine translocation pathway signal K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6] C 00430 Taurine and hypotaurine metabolism D LVJ77_00935 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism C 00460 Cyanoamino acid metabolism C 00470 D-Amino acid metabolism [PATH:ckh00470] D LVJ77_04870 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LVJ77_11235 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D LVJ77_03435 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D LVJ77_00260 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LVJ77_09740 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:ckh00480] D LVJ77_01595 pxpA; 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D LVJ77_01610 pxpB; 5-oxoprolinase subunit PxpB K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D LVJ77_05125 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D LVJ77_05525 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D LVJ77_10115 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LVJ77_03460 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D LVJ77_09620 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LVJ77_05490 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D LVJ77_05665 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D LVJ77_11250 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:ckh00540] D LVJ77_07990 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D LVJ77_07980 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D LVJ77_11035 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D LVJ77_05970 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D LVJ77_01070 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D LVJ77_04300 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D LVJ77_00785 HAD family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D LVJ77_01670 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D LVJ77_02425 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D LVJ77_05555 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D LVJ77_11700 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D LVJ77_11200 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D LVJ77_05155 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D LVJ77_08155 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D LVJ77_04440 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ckh00541] D LVJ77_07680 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LVJ77_11715 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LVJ77_03035 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D LVJ77_04155 2Fe-2S iron-sulfur cluster-binding protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D LVJ77_02895 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D LVJ77_11275 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D LVJ77_11300 pseF; pseudaminic acid cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] C 00550 Peptidoglycan biosynthesis [PATH:ckh00550] D LVJ77_07670 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LVJ77_00260 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LVJ77_04870 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LVJ77_00245 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D LVJ77_00600 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D LVJ77_00265 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D LVJ77_11135 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] C 00552 Teichoic acid biosynthesis [PATH:ckh00552] D LVJ77_00600 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:ckh00543] D LVJ77_00515 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ckh00730] D LVJ77_00725 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D LVJ77_05775 FAD-binding oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19] D LVJ77_05765 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D LVJ77_09605 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D LVJ77_00400 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ckh00740] D LVJ77_00675 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D LVJ77_05505 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D LVJ77_06415 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D LVJ77_09725 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D LVJ77_06040 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D LVJ77_01710 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D LVJ77_11540 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism D LVJ77_03125 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] C 00760 Nicotinate and nicotinamide metabolism [PATH:ckh00760] D LVJ77_00525 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D LVJ77_01905 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D LVJ77_00825 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D LVJ77_04360 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D LVJ77_05810 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D LVJ77_07915 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D LVJ77_00750 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:ckh00770] D LVJ77_00970 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D LVJ77_11240 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D LVJ77_02570 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D LVJ77_07100 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D LVJ77_11115 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D LVJ77_03130 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D LVJ77_10690 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D LVJ77_01060 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:ckh00780] D LVJ77_10880 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D LVJ77_04720 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ77_10865 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ77_08445 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] C 00785 Lipoic acid metabolism [PATH:ckh00785] D LVJ77_09525 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D LVJ77_09535 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D LVJ77_02030 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_06370 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_02120 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D LVJ77_07840 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D LVJ77_08440 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:ckh00790] D LVJ77_01340 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D LVJ77_00735 nudB; dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D LVJ77_03080 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D LVJ77_00550 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D LVJ77_11045 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D LVJ77_11040 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D LVJ77_09075 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D LVJ77_09970 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:ckh00670] D LVJ77_11800 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LVJ77_07840 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D LVJ77_02025 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ckh00860] D LVJ77_01695 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LVJ77_06955 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D LVJ77_01650 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D LVJ77_10795 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D LVJ77_02380 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D LVJ77_07805 biliverdin-producing heme oxygenase K07215 pigA; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D LVJ77_10040 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ckh00130] D LVJ77_03235 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D LVJ77_11540 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D LVJ77_08295 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D LVJ77_09090 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ckh00900] D LVJ77_10650 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D LVJ77_08975 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D LVJ77_01250 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D LVJ77_07195 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D LVJ77_02075 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ77_11540 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D LVJ77_08180 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:ckh00523] D LVJ77_11715 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LVJ77_03035 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D LVJ77_11715 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:ckh00261] D LVJ77_09675 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LVJ77_01675 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LVJ77_08315 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ckh00521] D LVJ77_06750 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D LVJ77_02105 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D LVJ77_05080 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D LVJ77_11715 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LVJ77_03035 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D LVJ77_06750 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D LVJ77_11715 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:ckh00401] D LVJ77_04435 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D LVJ77_11145 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D LVJ77_04715 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LVJ77_04720 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ77_10865 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D LVJ77_08940 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D LVJ77_10590 acyl carrier protein K02078 acpP; acyl carrier protein D LVJ77_10595 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D LVJ77_11140 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ckh00362] D LVJ77_06910 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D LVJ77_02075 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D LVJ77_11540 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:ckh00625] D LVJ77_08345 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D LVJ77_06880 NADP-dependent oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:ckh00626] D LVJ77_08345 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D LVJ77_06880 NADP-dependent oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase D LVJ77_01040 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ckh03010] D LVJ77_02345 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D LVJ77_07480 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D LVJ77_07460 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D LVJ77_07485 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D LVJ77_07330 hypothetical protein K02954 RP-S14; small subunit ribosomal protein S14 D LVJ77_05495 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D LVJ77_07355 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D LVJ77_02355 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D LVJ77_07380 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D LVJ77_00605 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D LVJ77_10145 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D LVJ77_07585 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D LVJ77_07335 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D LVJ77_07320 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D LVJ77_07575 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D LVJ77_02360 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D LVJ77_07590 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D LVJ77_07345 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D LVJ77_07300 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D LVJ77_07365 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D LVJ77_08870 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D LVJ77_02945 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D LVJ77_07340 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D LVJ77_06555 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D LVJ77_07360 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D LVJ77_07305 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D LVJ77_07415 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D LVJ77_06065 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D LVJ77_02950 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D LVJ77_07420 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:ckh00970] D LVJ77_01545 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ77_01555 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ77_01565 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ77_07115 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ77_08050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ77_08830 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ77_10520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ77_02785 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ77_01845 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ77_06410 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ77_08460 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ77_06710 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ77_05880 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LVJ77_08280 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LVJ77_10655 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LVJ77_10660 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LVJ77_01850 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LVJ77_06405 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LVJ77_06600 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LVJ77_05820 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ77_05825 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ77_05830 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ77_07615 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ77_06715 tRNA-His K14226 tRNA-His; tRNA His D LVJ77_07120 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ77_08045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ77_08825 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ77_10515 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ77_05845 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ77_10010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ77_08260 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ77_08255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ77_07655 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LVJ77_09645 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LVJ77_01550 tRNA-Met K14230 tRNA-Met; tRNA Met D LVJ77_01560 tRNA-Met K14230 tRNA-Met; tRNA Met D LVJ77_01570 tRNA-Met K14230 tRNA-Met; tRNA Met D LVJ77_06080 tRNA-Ile K14230 tRNA-Met; tRNA Met D LVJ77_08695 tRNA-Met K14230 tRNA-Met; tRNA Met D LVJ77_06430 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LVJ77_08765 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LVJ77_06705 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LVJ77_04625 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LVJ77_10850 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LVJ77_05650 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LVJ77_06610 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LVJ77_07180 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LVJ77_06565 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LVJ77_07610 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LVJ77_07620 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LVJ77_02990 tRNA-Val K14237 tRNA-Val; tRNA Val D LVJ77_05735 tRNA-Val K14237 tRNA-Val; tRNA Val D LVJ77_09015 tRNA-Val K14237 tRNA-Val; tRNA Val D LVJ77_01695 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LVJ77_00135 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D LVJ77_08560 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LVJ77_01785 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LVJ77_01835 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LVJ77_09695 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LVJ77_01405 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ckh03060] D LVJ77_07600 hypothetical protein K03073 secE; preprotein translocase subunit SecE D LVJ77_03665 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D LVJ77_03670 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D LVJ77_03660 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D LVJ77_09395 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D LVJ77_09480 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D LVJ77_07190 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ckh04122] D LVJ77_00295 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D LVJ77_05770 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:ckh03018] D LVJ77_02410 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D LVJ77_11605 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D LVJ77_04265 UvrD-helicase domain-containing protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LVJ77_03545 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D LVJ77_06450 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] B B 09124 Replication and repair C 03030 DNA replication [PATH:ckh03030] D LVJ77_01840 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ77_07745 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ77_08910 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ77_01920 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LVJ77_01390 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LVJ77_02655 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LVJ77_01140 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LVJ77_09350 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] C 03410 Base excision repair [PATH:ckh03410] D LVJ77_09080 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D LVJ77_01855 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D LVJ77_06820 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D LVJ77_05615 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D LVJ77_02770 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LVJ77_11725 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] C 03420 Nucleotide excision repair [PATH:ckh03420] D LVJ77_04160 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B C 03430 Mismatch repair [PATH:ckh03430] D LVJ77_06385 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D LVJ77_04480 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D LVJ77_08175 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D LVJ77_01140 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LVJ77_01390 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LVJ77_01920 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LVJ77_01840 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ77_07745 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ77_08910 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] C 03440 Homologous recombination [PATH:ckh03440] D LVJ77_01140 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LVJ77_00335 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D LVJ77_02490 recR; recombination mediator RecR K06187 recR; recombination protein RecR D LVJ77_08170 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D LVJ77_01580 hypothetical protein K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D LVJ77_07970 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D LVJ77_02065 UvrD-helicase domain-containing protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D LVJ77_01390 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LVJ77_01920 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LVJ77_01840 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ77_07745 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ77_08910 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ77_02350 primosomal replication protein N K02686 priB; primosomal replication protein N C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ckh02010] D LVJ77_05175 ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein D LVJ77_05190 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D LVJ77_07695 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D LVJ77_08100 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein D LVJ77_07240 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D LVJ77_06870 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D LVJ77_06160 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D LVJ77_06165 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D LVJ77_06155 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D LVJ77_06175 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D LVJ77_06255 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D LVJ77_04560 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D LVJ77_00095 mglC; galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein D LVJ77_00090 mglA; galactose/methyl galactoside ABC transporter ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D LVJ77_04035 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D LVJ77_04045 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D LVJ77_05115 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D LVJ77_05105 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D LVJ77_06510 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D LVJ77_06570 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D LVJ77_06975 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D LVJ77_08955 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D LVJ77_02700 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D LVJ77_08390 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D LVJ77_08450 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D LVJ77_07505 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D LVJ77_05745 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] C 02060 Phosphotransferase system (PTS) [PATH:ckh02060] D LVJ77_05340 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D LVJ77_05545 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D LVJ77_04010 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:ckh03070] D LVJ77_03665 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D LVJ77_03670 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D LVJ77_07600 hypothetical protein K03073 secE; preprotein translocase subunit SecE D LVJ77_03660 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D LVJ77_09395 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D LVJ77_09480 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D LVJ77_03430 ShlB/FhaC/HecB family hemolysin secretion/activation protein K11017 shlB; hemolysin activation/secretion protein D LVJ77_07760 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:ckh02020] D LVJ77_11055 HD domain-containing protein K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D LVJ77_02735 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D LVJ77_05715 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LVJ77_04985 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D LVJ77_02075 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ77_03260 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D LVJ77_08275 pilin K02650 pilA; type IV pilus assembly protein PilA D LVJ77_08015 pilin K02650 pilA; type IV pilus assembly protein PilA D LVJ77_00650 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D LVJ77_04565 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D LVJ77_00660 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LVJ77_03530 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D LVJ77_03540 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D LVJ77_11915 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D LVJ77_02695 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D LVJ77_02690 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D LVJ77_07015 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D LVJ77_03530 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ckh02024] D LVJ77_00685 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D LVJ77_03545 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D LVJ77_08065 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D LVJ77_02230 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LVJ77_08660 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D LVJ77_00675 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D LVJ77_06510 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D LVJ77_06570 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D LVJ77_06975 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D LVJ77_07600 hypothetical protein K03073 secE; preprotein translocase subunit SecE D LVJ77_03660 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D LVJ77_09395 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:ckh02030] D LVJ77_06255 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D LVJ77_04560 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D LVJ77_00650 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D LVJ77_04565 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D LVJ77_00660 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LVJ77_00665 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX C 02040 Flagellar assembly [PATH:ckh02040] D LVJ77_04035 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D LVJ77_00310 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ckh01501] D LVJ77_06395 porin K18133 K18133; major outer membrane protein P.IB D LVJ77_00795 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D LVJ77_05850 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D LVJ77_06510 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D LVJ77_06570 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D LVJ77_06975 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D LVJ77_07780 RNA ligase RtcB family protein K18148 rtcB; release factor H-coupled RctB family protein D LVJ77_09980 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system C 01502 Vancomycin resistance [PATH:ckh01502] D LVJ77_04870 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LVJ77_00245 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D LVJ77_00265 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ckh01503] D LVJ77_11165 type I secretion C-terminal target domain-containing protein K01406 prtC; serralysin [EC:3.4.24.40] D LVJ77_00595 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D LVJ77_09980 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D LVJ77_07990 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ckh01000] C 01001 Protein kinases [BR:ckh01001] D LVJ77_01880 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LVJ77_04985 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D LVJ77_00650 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D LVJ77_04565 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ckh01009] D LVJ77_02020 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D LVJ77_11575 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:ckh01002] D LVJ77_07190 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D LVJ77_07640 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LVJ77_08025 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70] D LVJ77_11165 type I secretion C-terminal target domain-containing protein K01406 prtC; serralysin [EC:3.4.24.40] D LVJ77_06500 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D LVJ77_10425 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D LVJ77_05525 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D LVJ77_01330 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LVJ77_10985 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D LVJ77_04820 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D LVJ77_10485 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D LVJ77_11405 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D LVJ77_04425 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D LVJ77_06905 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-] D LVJ77_04385 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein C 01003 Glycosyltransferases [BR:ckh01003] D LVJ77_11340 glycosyltransferase family 52 protein K00785 lst; N-acetyllactosaminide alpha-2,3-sialyltransferase [EC:2.4.3.6] D LVJ77_11135 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ckh01005] D LVJ77_07990 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D LVJ77_07980 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D LVJ77_11035 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D LVJ77_05970 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D LVJ77_01670 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D LVJ77_02425 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D LVJ77_04300 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D LVJ77_00785 HAD family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D LVJ77_01070 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D LVJ77_11700 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D LVJ77_05155 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D LVJ77_08155 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D LVJ77_04440 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D LVJ77_05555 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D LVJ77_11200 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ckh01011] D LVJ77_07670 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LVJ77_00260 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LVJ77_04870 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LVJ77_03435 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D LVJ77_00265 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D LVJ77_00600 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D LVJ77_08210 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D LVJ77_11135 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D LVJ77_10250 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D LVJ77_06615 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:ckh01004] D LVJ77_04715 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LVJ77_05060 StlD/DarB family beta-ketosynthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LVJ77_10880 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D LVJ77_04720 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ77_10865 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ77_08445 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LVJ77_06135 acyl-CoA thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-] D LVJ77_02230 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LVJ77_09085 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D LVJ77_06675 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:ckh01006] D LVJ77_08180 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D LVJ77_03335 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:ckh01007] D LVJ77_01695 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LVJ77_01705 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D LVJ77_09695 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LVJ77_01405 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LVJ77_01785 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LVJ77_08560 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LVJ77_01835 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LVJ77_00500 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D LVJ77_11145 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LVJ77_05290 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:ckh00194] D LVJ77_00890 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D LVJ77_00865 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D LVJ77_00855 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ckh03000] D LVJ77_06840 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ77_05460 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D LVJ77_06220 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D LVJ77_03180 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LVJ77_08660 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D LVJ77_01645 fnr; fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D LVJ77_06765 SIS domain-containing protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D LVJ77_11765 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LVJ77_11625 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D LVJ77_11855 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D LVJ77_01795 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 03021 Transcription machinery [BR:ckh03021] D LVJ77_01040 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LVJ77_00310 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D LVJ77_06590 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D LVJ77_05510 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D LVJ77_01200 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D LVJ77_01440 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA D LVJ77_09180 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D LVJ77_01660 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB C 03019 Messenger RNA biogenesis [BR:ckh03019] D LVJ77_11605 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D LVJ77_01370 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D LVJ77_10710 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LVJ77_07410 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D LVJ77_04265 UvrD-helicase domain-containing protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LVJ77_03545 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D LVJ77_06450 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D LVJ77_02410 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D LVJ77_06665 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D LVJ77_06830 DUF3418 domain-containing protein K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:ckh03011] D LVJ77_02345 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D LVJ77_07480 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D LVJ77_07460 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D LVJ77_07485 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D LVJ77_07330 hypothetical protein K02954 RP-S14; small subunit ribosomal protein S14 D LVJ77_05495 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D LVJ77_07355 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D LVJ77_02355 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D LVJ77_07380 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D LVJ77_00605 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D LVJ77_10145 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D LVJ77_07585 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D LVJ77_07335 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D LVJ77_07320 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D LVJ77_02360 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D LVJ77_07590 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D LVJ77_07575 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D LVJ77_07345 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D LVJ77_07300 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D LVJ77_07365 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D LVJ77_08870 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D LVJ77_02945 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D LVJ77_07340 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D LVJ77_06555 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D LVJ77_07360 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D LVJ77_07305 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D LVJ77_07415 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D LVJ77_06065 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D LVJ77_02950 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D LVJ77_07420 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 03009 Ribosome biogenesis [BR:ckh03009] D LVJ77_10710 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LVJ77_07410 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D LVJ77_06590 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D LVJ77_05510 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D LVJ77_11195 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D LVJ77_03690 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D LVJ77_04970 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D LVJ77_08150 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D LVJ77_02710 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D LVJ77_00215 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D LVJ77_05625 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D LVJ77_07880 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D LVJ77_04145 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D LVJ77_03135 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D LVJ77_10970 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D LVJ77_08105 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D LVJ77_11655 class I SAM-dependent methyltransferase K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264] D LVJ77_01235 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D LVJ77_11610 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D LVJ77_03020 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LVJ77_01790 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D LVJ77_04315 rRNA pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D LVJ77_05620 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D LVJ77_06925 GNAT family N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D LVJ77_00610 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D LVJ77_11605 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D LVJ77_01370 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D LVJ77_11555 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D LVJ77_09610 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D LVJ77_06595 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D LVJ77_01810 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein D LVJ77_06935 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D LVJ77_10260 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D LVJ77_02790 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D LVJ77_11090 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein D LVJ77_00760 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D LVJ77_07940 YceD family protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ckh03016] D LVJ77_01360 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D LVJ77_01695 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LVJ77_01835 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LVJ77_01785 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LVJ77_08560 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LVJ77_09695 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LVJ77_01405 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LVJ77_09465 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D LVJ77_07735 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D LVJ77_08070 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D LVJ77_03185 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D LVJ77_03335 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D LVJ77_06060 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D LVJ77_10995 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D LVJ77_07960 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D LVJ77_01705 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D LVJ77_09545 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D LVJ77_03695 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D LVJ77_01655 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D LVJ77_00805 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D LVJ77_01960 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D LVJ77_04175 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D LVJ77_00295 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D LVJ77_04405 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D LVJ77_00845 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D LVJ77_10015 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D LVJ77_09075 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D LVJ77_11045 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D LVJ77_11040 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D LVJ77_09970 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D LVJ77_02210 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D LVJ77_05675 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D LVJ77_05565 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D LVJ77_04885 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D LVJ77_10090 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D LVJ77_04090 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D LVJ77_05645 vapC; tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:ckh03012] D LVJ77_02955 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D LVJ77_01365 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D LVJ77_05910 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D LVJ77_10615 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D LVJ77_08200 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D LVJ77_06625 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D LVJ77_01270 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D LVJ77_07290 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D LVJ77_09240 efp; elongation factor P K02356 efp; elongation factor P D LVJ77_04760 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D LVJ77_07775 prfH; peptide chain release factor H K02839 prfH; peptide chain release factor C 03110 Chaperones and folding catalysts [BR:ckh03110] D LVJ77_00900 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D LVJ77_00905 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D LVJ77_07665 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D LVJ77_09715 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D LVJ77_10990 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D LVJ77_04275 groES; co-chaperone GroES K04078 groES; chaperonin GroES D LVJ77_10985 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D LVJ77_09395 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D LVJ77_07855 Spy/CpxP family protein refolding chaperone K06006 cpxP; periplasmic protein CpxP/Spy D LVJ77_06515 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D LVJ77_11455 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D LVJ77_00625 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D LVJ77_00405 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D LVJ77_05355 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D LVJ77_08545 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D LVJ77_05550 grxB; glutaredoxin 2 K03675 grxB; glutaredoxin 2 D LVJ77_06770 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D LVJ77_01760 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D LVJ77_00595 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D LVJ77_09070 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] C 04131 Membrane trafficking [BR:ckh04131] D LVJ77_07975 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LVJ77_08290 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LVJ77_04290 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:ckh03032] D LVJ77_06840 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ77_04060 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D LVJ77_10840 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D LVJ77_04515 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D LVJ77_02655 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LVJ77_01140 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LVJ77_01390 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LVJ77_01920 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LVJ77_01840 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ77_07745 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ77_08910 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ77_09350 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D LVJ77_07860 DnaA/Hda family protein K10763 hda; DnaA-homolog protein D LVJ77_10295 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] C 03036 Chromosome and associated proteins [BR:ckh03036] D LVJ77_06840 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ77_10710 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LVJ77_04060 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D LVJ77_10840 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D LVJ77_04515 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D LVJ77_11765 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LVJ77_03545 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D LVJ77_03180 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LVJ77_04900 hypothetical protein K03529 smc; chromosome segregation protein D LVJ77_04610 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D LVJ77_03385 septum formation initiator family protein K05589 ftsB; cell division protein FtsB D LVJ77_05710 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D LVJ77_00220 cell division protein FtsN K03586 ftsL; cell division protein FtsL D LVJ77_04865 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D LVJ77_07505 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D LVJ77_10415 cell division protein ZapA K09888 zapA; cell division protein ZapA D LVJ77_09980 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D LVJ77_05470 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D LVJ77_05465 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D LVJ77_08525 hypothetical protein K03569 mreB; rod shape-determining protein MreB and related proteins D LVJ77_00150 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D LVJ77_00155 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D LVJ77_02715 AAA family ATPase K03496 parA; chromosome partitioning protein D LVJ77_01795 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LVJ77_10295 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LVJ77_02710 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D LVJ77_04390 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D LVJ77_02505 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D LVJ77_08420 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D LVJ77_06795 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:ckh03400] D LVJ77_10695 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D LVJ77_10730 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D LVJ77_01855 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D LVJ77_09080 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D LVJ77_05375 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D LVJ77_02665 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D LVJ77_05615 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D LVJ77_06820 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D LVJ77_02770 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LVJ77_11725 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LVJ77_07205 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D LVJ77_04160 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D LVJ77_01040 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LVJ77_06385 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D LVJ77_04480 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D LVJ77_08175 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D LVJ77_01390 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LVJ77_01920 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LVJ77_01840 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ77_07745 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ77_08910 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ77_01140 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LVJ77_02065 UvrD-helicase domain-containing protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D LVJ77_08170 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D LVJ77_01580 hypothetical protein K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D LVJ77_07970 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D LVJ77_02350 primosomal replication protein N K02686 priB; primosomal replication protein N D LVJ77_06950 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D LVJ77_00335 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D LVJ77_02490 recR; recombination mediator RecR K06187 recR; recombination protein RecR D LVJ77_04205 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D LVJ77_03010 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D LVJ77_05255 cas1c; type I-C CRISPR-associated endonuclease Cas1c K15342 cas1; CRISP-associated protein Cas1 D LVJ77_10170 CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D LVJ77_04060 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D LVJ77_11765 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LVJ77_10840 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D LVJ77_04515 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D LVJ77_04265 UvrD-helicase domain-containing protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] C 03029 Mitochondrial biogenesis [BR:ckh03029] D LVJ77_02955 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D LVJ77_05910 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D LVJ77_09695 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LVJ77_01785 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LVJ77_00135 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D LVJ77_01140 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LVJ77_09715 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D LVJ77_04275 groES; co-chaperone GroES K04078 groES; chaperonin GroES D LVJ77_00905 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D LVJ77_01760 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D LVJ77_09025 SCO family protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ckh02000] D LVJ77_05745 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D LVJ77_05175 ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein D LVJ77_05190 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D LVJ77_07695 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D LVJ77_08100 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein D LVJ77_07240 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D LVJ77_06870 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D LVJ77_01515 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D LVJ77_01510 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D LVJ77_01525 ATP-binding cassette domain-containing protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D LVJ77_04560 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D LVJ77_00095 mglC; galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein D LVJ77_00090 mglA; galactose/methyl galactoside ABC transporter ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D LVJ77_06255 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D LVJ77_06165 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D LVJ77_06175 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D LVJ77_06160 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D LVJ77_06155 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D LVJ77_06235 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D LVJ77_04035 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D LVJ77_04045 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D LVJ77_05115 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D LVJ77_05105 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D LVJ77_06035 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ77_02965 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ77_01145 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ77_01230 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ77_02040 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ77_03255 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ77_05575 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ77_06685 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ77_07350 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ77_08740 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ77_08995 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ77_00840 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ77_02960 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ77_06510 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D LVJ77_06570 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D LVJ77_06975 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D LVJ77_08955 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D LVJ77_08355 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D LVJ77_08390 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D LVJ77_08450 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D LVJ77_05045 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D LVJ77_02700 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D LVJ77_07505 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D LVJ77_05040 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D LVJ77_09105 SLC13 family permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D LVJ77_01475 MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D LVJ77_00795 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D LVJ77_04635 hypothetical protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D LVJ77_05340 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D LVJ77_05545 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D LVJ77_04010 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D LVJ77_01615 aquaporin family protein K02440 glpF; glycerol uptake facilitator D LVJ77_10115 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LVJ77_01200 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D LVJ77_04065 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D LVJ77_04170 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D LVJ77_04770 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D LVJ77_04765 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D LVJ77_06395 porin K18133 K18133; major outer membrane protein P.IB D LVJ77_04340 lactoferrin/transferrin family TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D LVJ77_00015 TonB-dependent receptor plug domain-containing protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D LVJ77_10080 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D LVJ77_03655 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system D LVJ77_02695 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D LVJ77_08310 bamE; outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D LVJ77_08685 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB D LVJ77_07145 hypothetical protein K21449 ata; trimeric autotransporter adhesin D LVJ77_00775 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D LVJ77_00780 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D LVJ77_08535 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D LVJ77_01385 lptE; LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein D LVJ77_10265 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein D LVJ77_04790 CidA/LrgA family protein K06518 cidA; holin-like protein D LVJ77_07445 zupT; zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D LVJ77_03345 SMR family transporter K03297 emrE; small multidrug resistance pump D LVJ77_10055 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D LVJ77_08305 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D LVJ77_00010 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter D LVJ77_08490 cation acetate symporter K14393 actP; cation/acetate symporter D LVJ77_01465 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D LVJ77_06740 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D LVJ77_05090 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D LVJ77_00800 aromatic amino acid transporter K03835 mtr; tryptophan-specific transport protein D LVJ77_04730 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D LVJ77_08210 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D LVJ77_09810 LysE family transporter K05835 rhtC; threonine efflux protein D LVJ77_09965 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter K09125 yhhQ; queuosine precursor transporter D LVJ77_02460 MarC family protein K05595 marC; multiple antibiotic resistance protein D LVJ77_03620 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D LVJ77_09980 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D LVJ77_05740 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system C 02044 Secretion system [BR:ckh02044] D LVJ77_03620 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D LVJ77_03655 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system D LVJ77_08275 pilin K02650 pilA; type IV pilus assembly protein PilA D LVJ77_08015 pilin K02650 pilA; type IV pilus assembly protein PilA D LVJ77_11125 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D LVJ77_02340 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D LVJ77_02615 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D LVJ77_01240 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D LVJ77_11415 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D LVJ77_11420 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D LVJ77_11425 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D LVJ77_11430 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D LVJ77_02635 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D LVJ77_02625 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D LVJ77_02630 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW D LVJ77_02620 pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX D LVJ77_01915 pilus assembly protein K02676 pilZ; type IV pilus assembly protein PilZ D LVJ77_10535 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA D LVJ77_07760 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D LVJ77_07140 YadA-like family protein K12690 hsf; adhesin Hsf D LVJ77_03430 ShlB/FhaC/HecB family hemolysin secretion/activation protein K11017 shlB; hemolysin activation/secretion protein D LVJ77_09395 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D LVJ77_03665 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D LVJ77_07600 hypothetical protein K03073 secE; preprotein translocase subunit SecE D LVJ77_03670 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D LVJ77_03660 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D LVJ77_09480 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:ckh02042] D LVJ77_03430 ShlB/FhaC/HecB family hemolysin secretion/activation protein K11017 shlB; hemolysin activation/secretion protein C 02022 Two-component system [BR:ckh02022] D LVJ77_01880 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LVJ77_02545 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D LVJ77_04985 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D LVJ77_03260 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D LVJ77_00650 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D LVJ77_04565 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D LVJ77_00660 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY C 02035 Bacterial motility proteins [BR:ckh02035] D LVJ77_00650 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D LVJ77_04565 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D LVJ77_00665 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX D LVJ77_00660 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LVJ77_04035 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D LVJ77_03260 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D LVJ77_08275 pilin K02650 pilA; type IV pilus assembly protein PilA D LVJ77_08015 pilin K02650 pilA; type IV pilus assembly protein PilA D LVJ77_11125 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D LVJ77_01240 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D LVJ77_11430 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D LVJ77_11425 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D LVJ77_11420 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D LVJ77_11415 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D LVJ77_01915 pilus assembly protein K02676 pilZ; type IV pilus assembly protein PilZ D LVJ77_02635 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D LVJ77_02625 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D LVJ77_02630 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW D LVJ77_02620 pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX D LVJ77_02340 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D LVJ77_02615 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ckh04812] D LVJ77_08525 hypothetical protein K03569 mreB; rod shape-determining protein MreB and related proteins D LVJ77_05470 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D LVJ77_05465 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D LVJ77_02715 AAA family ATPase K03496 parA; chromosome partitioning protein D LVJ77_01795 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ckh04147] D LVJ77_07975 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LVJ77_04290 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LVJ77_09465 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D LVJ77_02230 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LVJ77_02075 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ77_00400 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D LVJ77_00070 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D LVJ77_01625 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D LVJ77_05715 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LVJ77_11800 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LVJ77_02030 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_06370 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ77_09620 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LVJ77_08290 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:ckh02048] D LVJ77_05255 cas1c; type I-C CRISPR-associated endonuclease Cas1c K15342 cas1; CRISP-associated protein Cas1 D LVJ77_10170 CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D LVJ77_05260 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D LVJ77_10185 CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D LVJ77_05230 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D LVJ77_05250 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D LVJ77_05240 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1 D LVJ77_05245 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2 D LVJ77_05235 cas5c; type I-C CRISPR-associated protein Cas5c K19119 cas5d; CRISPR-associated protein Cas5d D LVJ77_10205 cmr1; type III-B CRISPR module RAMP protein Cmr1 K07061 cmr1; CRISPR-associated protein Cmr1 D LVJ77_10215 cas10; type III-B CRISPR-associated protein Cas10/Cmr2 K19076 cmr2; CRISPR-associated protein Cmr2 D LVJ77_10220 type III-B CRISPR module-associated protein Cmr3 K09127 cmr3; CRISPR-associated protein Cmr3 D LVJ77_10225 cmr4; type III-B CRISPR module RAMP protein Cmr4 K09000 cmr4; CRISPR-associated protein Cmr4 D LVJ77_10230 cmr5; type III-B CRISPR module-associated protein Cmr5 K19141 cmr5; CRISPR-associated protein Cmr5 D LVJ77_10235 cmr6; type III-B CRISPR module RAMP protein Cmr6 K19142 cmr6; CRISPR-associated protein Cmr6 D LVJ77_10155 csx16; CRISPR-associated protein Csx16 K19145 csx16; CRISPR-associated protein Csx16 D LVJ77_08430 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D LVJ77_08410 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D LVJ77_08405 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D LVJ77_06835 site-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D LVJ77_06840 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ77_02970 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5] D LVJ77_02975 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D LVJ77_11880 restriction endonuclease K07448 mrr; restriction system protein D LVJ77_00940 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D LVJ77_00945 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D LVJ77_01095 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D LVJ77_02820 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D LVJ77_01090 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1 D LVJ77_02815 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1 D LVJ77_04090 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D LVJ77_05645 vapC; tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D LVJ77_04095 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB D LVJ77_05640 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB D LVJ77_07220 type II toxin-antitoxin system VapC family toxin K07062 fitB; toxin FitB [EC:3.1.-.-] D LVJ77_08525 hypothetical protein K03569 mreB; rod shape-determining protein MreB and related proteins D LVJ77_10295 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LVJ77_01695 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LVJ77_02155 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:ckh01504] D LVJ77_09980 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ckh03100] D LVJ77_01545 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ77_01555 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ77_01565 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ77_07115 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ77_08050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ77_08830 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ77_10520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ77_02785 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ77_01845 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ77_06410 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ77_08460 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ77_06710 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ77_05880 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LVJ77_08280 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LVJ77_10655 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LVJ77_10660 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LVJ77_01850 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LVJ77_06405 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LVJ77_06600 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LVJ77_05820 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ77_05825 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ77_05830 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ77_07615 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ77_06715 tRNA-His K14226 tRNA-His; tRNA His D LVJ77_07120 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ77_08045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ77_08825 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ77_10515 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ77_05845 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ77_10010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ77_08260 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ77_08255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ77_07655 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LVJ77_09645 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LVJ77_01550 tRNA-Met K14230 tRNA-Met; tRNA Met D LVJ77_01560 tRNA-Met K14230 tRNA-Met; tRNA Met D LVJ77_01570 tRNA-Met K14230 tRNA-Met; tRNA Met D LVJ77_06080 tRNA-Ile K14230 tRNA-Met; tRNA Met D LVJ77_08695 tRNA-Met K14230 tRNA-Met; tRNA Met D LVJ77_06430 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LVJ77_08765 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LVJ77_06705 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LVJ77_04625 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LVJ77_10850 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LVJ77_05650 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LVJ77_06610 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LVJ77_07180 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LVJ77_06565 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LVJ77_07610 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LVJ77_07620 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LVJ77_02990 tRNA-Val K14237 tRNA-Val; tRNA Val D LVJ77_05735 tRNA-Val K14237 tRNA-Val; tRNA Val D LVJ77_09015 tRNA-Val K14237 tRNA-Val; tRNA Val # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D LVJ77_03000 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D LVJ77_04450 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D LVJ77_03115 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D LVJ77_02400 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D LVJ77_02295 methyltransferase domain-containing protein K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D LVJ77_01930 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D LVJ77_08645 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D LVJ77_02070 DUF3488 and transglutaminase-like domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D LVJ77_02565 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D LVJ77_05455 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D LVJ77_06825 reverse transcriptase/maturase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LVJ77_10570 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D LVJ77_05580 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D LVJ77_04540 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D LVJ77_03165 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D LVJ77_04030 thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D LVJ77_07935 Maf family nucleotide pyrophosphatase K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D LVJ77_06230 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D LVJ77_04835 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D LVJ77_03330 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D LVJ77_04410 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D LVJ77_08580 hypothetical protein K03839 fldA; flavodoxin I D LVJ77_07705 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D LVJ77_01005 DegV family EDD domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D LVJ77_06400 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein D LVJ77_10740 GNAT family N-acetyltransferase K22479 argA; N-acetyltransferase C 99986 Glycan metabolism C 99987 Cofactor metabolism D LVJ77_02375 heme biosynthesis protein HemY K02498 hemY; HemY protein D LVJ77_00580 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK C 99988 Secondary metabolism C 99999 Others D LVJ77_11070 hypothetical protein K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D LVJ77_10130 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D LVJ77_10490 OsmC family protein K07397 yhfA; putative redox protein C 99976 Replication and repair D LVJ77_00170 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D LVJ77_03775 terminase small subunit K07474 xtmA; phage terminase small subunit D LVJ77_03760 DUF5906 domain-containing protein K06919 K06919; putative DNA primase/helicase D LVJ77_00555 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease D LVJ77_05450 IS110 family transposase K07486 K07486; transposase D LVJ77_05750 IS110 family transposase K07486 K07486; transposase D LVJ77_05985 IS110 family transposase K07486 K07486; transposase D LVJ77_06005 transposase K07486 K07486; transposase D LVJ77_06100 transposase K07486 K07486; transposase D LVJ77_09265 IS110 family transposase K07486 K07486; transposase D LVJ77_09270 IS110 family transposase K07486 K07486; transposase D LVJ77_09285 IS110 family transposase K07486 K07486; transposase D LVJ77_11615 IS110 family transposase K07486 K07486; transposase D LVJ77_02830 transposase K07491 rayT; REP-associated tyrosine transposase D LVJ77_00620 transposase K07496 K07496; putative transposase D LVJ77_11585 transposase K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others D LVJ77_08240 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E D LVJ77_03225 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D LVJ77_04965 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D LVJ77_01375 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D LVJ77_11845 septation protein A K06190 ispZ; intracellular septation protein D LVJ77_03365 hypothetical protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D LVJ77_05925 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D LVJ77_03355 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D LVJ77_07740 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein C 99992 Structural proteins D LVJ77_09910 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D LVJ77_10635 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D LVJ77_06150 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D LVJ77_11815 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB D LVJ77_04335 surface lipoprotein assembly modifier K07280 K07280; outer membrane protein C 99994 Others D LVJ77_07685 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin D LVJ77_07900 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO B B 09194 Poorly characterized C 99996 General function prediction only D LVJ77_03100 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D LVJ77_00425 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D LVJ77_11220 YihY family inner membrane protein K07058 K07058; membrane protein D LVJ77_01030 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D LVJ77_09390 SlyX family protein K03745 slyX; SlyX protein D LVJ77_06490 CreA family protein K05805 creA; CreA protein D LVJ77_05145 YdcF family protein K03748 sanA; SanA protein D LVJ77_04750 DedA family protein K03975 dedA; membrane-associated protein D LVJ77_05195 DUF350 domain-containing protein K08989 K08989; putative membrane protein D LVJ77_08520 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D LVJ77_11020 ATP-binding protein K06923 K06923; uncharacterized protein D LVJ77_05275 DUF697 domain-containing protein K06946 K06946; uncharacterized protein D LVJ77_02905 hpnE; hydroxysqualene dehydroxylase HpnE K06954 K06954; uncharacterized protein D LVJ77_10905 C39 family peptidase K06992 K06992; uncharacterized protein D LVJ77_04115 hypothetical protein K07000 K07000; uncharacterized protein D LVJ77_06990 alpha/beta fold hydrolase K07018 K07018; uncharacterized protein D LVJ77_01750 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein D LVJ77_09690 nitroreductase family protein K07078 K07078; uncharacterized protein D LVJ77_09255 TSUP family transporter K07090 K07090; uncharacterized protein D LVJ77_06605 sel1 repeat family protein K07126 K07126; uncharacterized protein D LVJ77_10020 SEL1-like repeat protein K07126 K07126; uncharacterized protein D LVJ77_08795 roadblock/LC7 domain-containing protein K07131 K07131; uncharacterized protein D LVJ77_06780 YitT family protein K07149 K07149; uncharacterized protein D LVJ77_06050 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D LVJ77_05930 PFL family protein K09157 K09157; uncharacterized protein D LVJ77_09520 DUF493 domain-containing protein K09158 K09158; uncharacterized protein D LVJ77_09720 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D LVJ77_04215 YbaN family protein K09790 K09790; uncharacterized protein D LVJ77_06025 Trm112 family protein K09791 K09791; uncharacterized protein D LVJ77_04810 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein D LVJ77_02725 DUF456 family protein K09793 K09793; uncharacterized protein D LVJ77_06460 YdcH family protein K09794 K09794; uncharacterized protein D LVJ77_05595 hypothetical protein K09795 K09795; uncharacterized protein D LVJ77_01265 RnfH family protein K09801 K09801; uncharacterized protein D LVJ77_01430 ABC-type transport auxiliary lipoprotein family protein K09857 K09857; uncharacterized protein D LVJ77_01865 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D LVJ77_00340 FixH family protein K09926 K09926; uncharacterized protein D LVJ77_04210 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein D LVJ77_09840 ACT domain-containing protein K09964 K09964; uncharacterized protein D LVJ77_06380 TraB/GumN family protein K09973 K09973; uncharacterized protein D LVJ77_05680 DUF1853 family protein K09977 K09977; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 11, 2024