+D GENES KO
#
KEGG Orthology (KO) - Campylobacter lari RM16712
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:clm00010]
D UPTC16712_0261 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D UPTC16712_0737 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D UPTC16712_0909 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D UPTC16712_0417 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D UPTC16712_0419 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D UPTC16712_0418 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D UPTC16712_0277 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UPTC16712_0158 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UPTC16712_0485 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D UPTC16712_0385 por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D UPTC16712_0834 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D UPTC16712_0833 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D UPTC16712_0345 zinc-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D UPTC16712_0268 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D UPTC16712_1207 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:clm00020]
D UPTC16712_0834 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D UPTC16712_0833 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D UPTC16712_0832 oorC; 2-oxoglutarate:acceptor oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D UPTC16712_0835 oorD; 2-oxoglutarate:acceptor oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D UPTC16712_0338 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D UPTC16712_0339 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D UPTC16712_0337 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D UPTC16712_0426 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D UPTC16712_0836 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UPTC16712_0486 mqo; malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D UPTC16712_0593 pycA; pyruvate carboxylase, subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D UPTC16712_1208 pycB; pyruvate carboxylase, subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D UPTC16712_1207 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D UPTC16712_0385 por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:clm00030]
D UPTC16712_0261 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D UPTC16712_1027 rpe; ribulose phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D UPTC16712_0124 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D UPTC16712_1358 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D UPTC16712_0695 rpiB; allose-6-phosphate isomerase / ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D UPTC16712_0268 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D UPTC16712_1271 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D UPTC16712_0909 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D UPTC16712_0737 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:clm00040]
D UPTC16712_0262 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D UPTC16712_1027 rpe; ribulose phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D UPTC16712_1187 hypothetical protein, putative aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:clm00051]
D UPTC16712_0268 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D UPTC16712_1187 hypothetical protein, putative aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D UPTC16712_0737 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D UPTC16712_0909 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D UPTC16712_0417 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D UPTC16712_0313 GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D UPTC16712_0695 rpiB; allose-6-phosphate isomerase / ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:clm00052]
D UPTC16712_1250 gne; UDP-GlcNAc/Glc 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UPTC16712_0262 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D UPTC16712_0268 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:clm00500]
D UPTC16712_0262 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D UPTC16712_0268 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D UPTC16712_0261 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:clm00520]
D UPTC16712_0427 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D UPTC16712_1568 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D UPTC16712_0980 glmU; fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D UPTC16712_0755 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D UPTC16712_0162 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D UPTC16712_1071 aminotransferase, DegT/DnrJ/EryC1/StrS family K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D UPTC16712_1300 pseB; UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D UPTC16712_1301 pseC; UDP-2-acetamido-2,6-dideoxy-beta-L-arabino-hex-4-ulose aminotransferase K15895 pseC; UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine transaminase [EC:2.6.1.92]
D UPTC16712_1317 pseH; UDP-4-amino-4,6-dideoxy-beta-L-AltNAc o-acetyltransferase K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202]
D UPTC16712_1316 pseG; UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranosyl transferase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D UPTC16712_0176 pseI; pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D UPTC16712_1312 pseF; CMP-pseudaminic acid synthetase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D UPTC16712_1259 pglF; UDP-N-acetylglucosamine C-6 dehydratase K15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D UPTC16712_1258 pglE; UDP-4-amino-4,6-dideoxy-alpha-D-N-acetyl-D-glucosamine transaminase K15910 pglE; UDP-N-acetylbacillosamine transaminase [EC:2.6.1.34]
D UPTC16712_1257 pglD; UDP-4-amino-4,6-dideoxy-alpha-D-N-acetyl-D-glucosamine N-acetyltransferase K15913 pglD; UDP-N-acetylbacillosamine N-acetyltransferase [EC:2.3.1.203]
D UPTC16712_0268 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D UPTC16712_0262 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D UPTC16712_1250 gne; UDP-GlcNAc/Glc 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UPTC16712_0261 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D UPTC16712_0313 GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
C 00620 Pyruvate metabolism [PATH:clm00620]
D UPTC16712_0385 por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D UPTC16712_0834 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D UPTC16712_0833 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D UPTC16712_0345 zinc-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D UPTC16712_0648 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D UPTC16712_0647 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D UPTC16712_0485 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D UPTC16712_0297 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D UPTC16712_1298 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D UPTC16712_1297 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D UPTC16712_0218 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D UPTC16712_0894 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D UPTC16712_1294 mez; malate oxidoreductase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D UPTC16712_0593 pycA; pyruvate carboxylase, subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D UPTC16712_1208 pycB; pyruvate carboxylase, subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D UPTC16712_0836 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UPTC16712_0486 mqo; malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D UPTC16712_0426 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D UPTC16712_0338 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D UPTC16712_0339 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D UPTC16712_0337 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D UPTC16712_1207 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D UPTC16712_0786 putative membrane protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:clm00630]
D UPTC16712_0836 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UPTC16712_1229 gycolate oxidase, subunit GlcD-related protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D UPTC16712_1136 anaerobic glycerol-3-phosphate dehydrogenase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D UPTC16712_0282 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D UPTC16712_1387 catalase-like protein K03781 katE; catalase [EC:1.11.1.6]
D UPTC16712_0792 hypothetical protein, putative phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D UPTC16712_0384 HAD-superfamily hydrolase, subfamily IA, probable phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D UPTC16712_1005 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UPTC16712_0495 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UPTC16712_0355 fdhF; formate dehydrogenase N, alpha subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D UPTC16712_0356 fdhG; formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D UPTC16712_0352 fdhC; formate dehydrogenase N, cytochrome b-556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D UPTC16712_1006 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:clm00640]
D UPTC16712_0648 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D UPTC16712_0647 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D UPTC16712_0297 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D UPTC16712_1298 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D UPTC16712_1297 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D UPTC16712_0218 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
C 00650 Butanoate metabolism [PATH:clm00650]
D UPTC16712_0338 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D UPTC16712_0339 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D UPTC16712_0337 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D UPTC16712_0385 por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D UPTC16712_0834 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D UPTC16712_0833 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D UPTC16712_0831 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UPTC16712_0830 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism
D UPTC16712_0831 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UPTC16712_0830 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00562 Inositol phosphate metabolism
D UPTC16712_0417 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:clm00190]
D UPTC16712_1436 nuoA; NADH:quinone oxidoreductase I, membrane subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D UPTC16712_1435 nuoB; NADH:quinone oxidoreductase I, chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D UPTC16712_1434 nuoC; NADH:quinone oxidoreductase I, chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D UPTC16712_1433 nuoD; NADH:quinone oxidoreductase I, chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D UPTC16712_1432 hypothetical protein K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D UPTC16712_1431 hypothetical protein K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D UPTC16712_1430 nuoG; NADH:quinone oxidoreductase I, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D UPTC16712_1429 nuoH; NADH:quinone oxidoreductase I, membrane subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D UPTC16712_1428 nuoI; NADH:quinone oxidoreductase I, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D UPTC16712_1427 nuoJ; NADH:quinone oxidoreductase I, membrane subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D UPTC16712_1426 nuoK; NADH:quinone oxidoreductase I, membrane subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D UPTC16712_1425 nuoL; NADH:quinone oxidoreductase I, membrane subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D UPTC16712_1424 nuoM; NADH:quinone oxidoreductase I, membrane subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D UPTC16712_1423 nuoN; NADH:quinone oxidoreductase I, membrane subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D UPTC16712_0904 ndh; NADH:quinone oxidoreductase II K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D UPTC16712_0338 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D UPTC16712_0339 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D UPTC16712_0337 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D UPTC16712_1099 petA; ubiquinol cytochrome c oxidoreductase PetABC, 2Fe-2S subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D UPTC16712_1098 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D UPTC16712_1097 petC; ubiquinol cytochrome c oxidoreductase PetABC, membrane-bound cytochrome c subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D UPTC16712_0371 ccoN; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D UPTC16712_0372 ccoO; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D UPTC16712_0373 ccoQ; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D UPTC16712_0374 ccoP; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D UPTC16712_0480 cccA; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c
D UPTC16712_0197 atpA; ATP synthase, F1 complex, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D UPTC16712_0199 atpD; ATP synthase, F1 complex, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D UPTC16712_0198 atpG; ATP synthase, F1 complex, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D UPTC16712_0196 atpH; ATP synthase, F1 complex, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D UPTC16712_0200 atpC; ATP synthase, F1 complex, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D UPTC16712_1219 atpB; ATP synthase, F0 complex, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D UPTC16712_0194 atpF'; ATP synthase, F0 complex, b' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D UPTC16712_0195 atpF; ATP synthase, F0 complex, b subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D UPTC16712_1212 atpE; ATP synthase, F0 complex, c subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D UPTC16712_0655 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D UPTC16712_1021 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D UPTC16712_0902 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:clm00710]
D UPTC16712_0418 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D UPTC16712_0419 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D UPTC16712_0909 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D UPTC16712_0737 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D UPTC16712_0124 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D UPTC16712_0695 rpiB; allose-6-phosphate isomerase / ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D UPTC16712_0417 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D UPTC16712_1027 rpe; ribulose phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D UPTC16712_1358 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D UPTC16712_1207 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D UPTC16712_1294 mez; malate oxidoreductase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D UPTC16712_0836 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Carbon fixation pathways in prokaryotes [PATH:clm00720]
D UPTC16712_0385 por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D UPTC16712_0593 pycA; pyruvate carboxylase, subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D UPTC16712_1208 pycB; pyruvate carboxylase, subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D UPTC16712_0836 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UPTC16712_0426 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D UPTC16712_0338 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D UPTC16712_0339 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D UPTC16712_0337 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D UPTC16712_0834 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D UPTC16712_0833 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D UPTC16712_0832 oorC; 2-oxoglutarate:acceptor oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D UPTC16712_0835 oorD; 2-oxoglutarate:acceptor oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D UPTC16712_0297 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D UPTC16712_1298 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D UPTC16712_1297 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D UPTC16712_0218 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D UPTC16712_0587 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase / 5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D UPTC16712_0647 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D UPTC16712_0648 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:clm00680]
D UPTC16712_0355 fdhF; formate dehydrogenase N, alpha subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D UPTC16712_0356 fdhG; formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D UPTC16712_0352 fdhC; formate dehydrogenase N, cytochrome b-556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D UPTC16712_0495 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UPTC16712_0158 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UPTC16712_0836 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UPTC16712_0909 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D UPTC16712_0737 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D UPTC16712_0432 molybdopterin-containing oxidoreductase I, DMSO/TMAO/BSO reductase family, catalytic subunit K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D UPTC16712_0648 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D UPTC16712_0647 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D UPTC16712_0277 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UPTC16712_1199 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D UPTC16712_1342 serC; phosphohydroxythreonine aminotransferase / 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D UPTC16712_1359 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:clm00910]
D UPTC16712_1017 napA; periplasmic nitrate reductase NapAB, large subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D UPTC16712_1014 napB; periplasmic nitrate reductase NapAB, small subunit, periplasmic diheme cytochrome c550 protein K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D UPTC16712_1023 nrfA; formate-dependent nitrite reductase NrfAH, periplasmic pentaheme cytochrome c subunit K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D UPTC16712_1022 nrfH; formate-dependent nitrite reductase NrfAH, membrane-bound tetraheme cytochrome c subunit K15876 nrfH; cytochrome c nitrite reductase small subunit
D UPTC16712_0627 npd; nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D UPTC16712_1164 hydrolase, carbon-nitrogen family K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D UPTC16712_1005 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UPTC16712_1507 canB; carbonic anhydrase, beta class K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D UPTC16712_1518 cah; carbonic anhydrase alpha K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:clm00920]
D UPTC16712_0318 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D UPTC16712_0317 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D UPTC16712_0254 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D UPTC16712_0320 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D UPTC16712_0164 cysQ; adenosine-3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D UPTC16712_0765 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D UPTC16712_1235 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:clm00061]
D UPTC16712_0297 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D UPTC16712_1298 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D UPTC16712_1297 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D UPTC16712_0218 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D UPTC16712_0295 acpP1; acyl carrier protein K02078 acpP; acyl carrier protein
D UPTC16712_0208 fabD; malonyl-CoA-[acp] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D UPTC16712_1309 3-oxoacyl-[acp] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D UPTC16712_1331 fabH; beta-ketoacyl-[acp] synthase III (KASIII) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D UPTC16712_0296 fabF; beta-ketoacyl-[acp] synthase II (KASII) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D UPTC16712_0278 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UPTC16712_1392 fabZ; 3-hydroxyacyl-[acp] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D UPTC16712_0917 aas; 2-acylglycerophosphoethanolamine acyltransferase / acyl-[acp] synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:clm00121]
D UPTC16712_0633 short-chain dehydrogenase/reductase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:clm00561]
D UPTC16712_0345 zinc-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D UPTC16712_1330 plsX; acyl phosphate synthase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D UPTC16712_0184 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UPTC16712_0720 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D UPTC16712_0054 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:clm00564]
D UPTC16712_1217 gpsA; glycerol 3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D UPTC16712_0184 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UPTC16712_0720 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D UPTC16712_0054 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D UPTC16712_1541 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D UPTC16712_0305 putative glycerol-3-phosphate cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15]
D UPTC16712_0917 aas; 2-acylglycerophosphoethanolamine acyltransferase / acyl-[acp] synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D UPTC16712_0509 SAM-dependent methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D UPTC16712_1537 cdsA; CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D UPTC16712_1264 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D UPTC16712_0579 psd; phosphatidylserine decarboxylase, proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D UPTC16712_1263 phosphatidylserine decarboxylase-related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D UPTC16712_0632 pgsA; phosphatidylglycerophosphate synthase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D UPTC16712_0253 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
C 00565 Ether lipid metabolism [PATH:clm00565]
D UPTC16712_1541 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D UPTC16712_1541 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D UPTC16712_1541 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:clm00592]
D UPTC16712_1541 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 01040 Biosynthesis of unsaturated fatty acids
D UPTC16712_1270 acyl-CoA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:clm00230]
D UPTC16712_0268 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D UPTC16712_1271 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D UPTC16712_1400 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D UPTC16712_0511 purD; phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D UPTC16712_1474 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D UPTC16712_0551 purL; phosphoribosylformylglycinamidine synthase PurLQS, PurL subunit K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D UPTC16712_0723 purS; phosphoribosylformylglycinamidine synthase PurLQS, PurS subunit K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D UPTC16712_0722 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D UPTC16712_0063 purM; phosphoribosylformylglycinamide cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D UPTC16712_1002 purE; 5-aminoimidazole ribonucleotide (AIR) carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D UPTC16712_0724 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D UPTC16712_0029 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D UPTC16712_0549 purH; AICAR transformylase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D UPTC16712_0693 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D UPTC16712_1372 surE; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D UPTC16712_1104 multi-copper polyphenol oxidoreductase laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D UPTC16712_1166 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D UPTC16712_1327 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D UPTC16712_1279 putative dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D UPTC16712_0431 putative nucleotide phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D UPTC16712_0508 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D UPTC16712_1091 gmk; deoxyguanylate kinase / guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D UPTC16712_0030 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UPTC16712_1513 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D UPTC16712_0059 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D UPTC16712_0625 spoT; ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D UPTC16712_0930 exopolyphosphatase, Ppx/GppA family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D UPTC16712_0180 gppA; guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D UPTC16712_0365 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D UPTC16712_0656 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D UPTC16712_0925 HIT family hydrolase, FHIT branch K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D UPTC16712_0320 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D UPTC16712_0318 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D UPTC16712_0317 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D UPTC16712_0254 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D UPTC16712_0006 ureB; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D UPTC16712_0005 ureA; fusion of urease beta and gamma subunits K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:clm00240]
D UPTC16712_1386 carB; carbamoylphosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D UPTC16712_0369 carA; carbamoylphosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D UPTC16712_1052 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D UPTC16712_1216 dihydroorotase, subgroup IIa K01465 URA4; dihydroorotase [EC:3.5.2.3]
D UPTC16712_0052 pyrC; dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D UPTC16712_0636 pyrD; dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D UPTC16712_1511 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D UPTC16712_0546 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D UPTC16712_0623 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D UPTC16712_1327 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D UPTC16712_1073 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D UPTC16712_0015 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D UPTC16712_1372 surE; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D UPTC16712_0059 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D UPTC16712_1299 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D UPTC16712_0030 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UPTC16712_1513 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D UPTC16712_0762 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D UPTC16712_0014 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D UPTC16712_0970 short-chain dehydrogenase/reductase, subgroup 5 K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:clm00250]
D UPTC16712_0589 aspB; aspartate aminotransferase, aminotransferase, classes I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D UPTC16712_0752 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D UPTC16712_0091 ansB; asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D UPTC16712_1384 L-asparaginase, type 2 (Ntn hydrolase superfamily) K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D UPTC16712_0148 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D UPTC16712_0772 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D UPTC16712_0284 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D UPTC16712_0365 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D UPTC16712_0029 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D UPTC16712_1052 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D UPTC16712_0360 putA; proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D UPTC16712_1005 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UPTC16712_1386 carB; carbamoylphosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D UPTC16712_0369 carA; carbamoylphosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D UPTC16712_0722 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D UPTC16712_0427 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D UPTC16712_1400 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:clm00260]
D UPTC16712_0680 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UPTC16712_0531 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D UPTC16712_1405 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D UPTC16712_0224 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D UPTC16712_0897 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D UPTC16712_0495 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UPTC16712_0277 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UPTC16712_1199 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D UPTC16712_1342 serC; phosphohydroxythreonine aminotransferase / 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D UPTC16712_1359 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D UPTC16712_0970 short-chain dehydrogenase/reductase, subgroup 5 K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D UPTC16712_1264 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D UPTC16712_0097 sdaA; L-serine deaminase I K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D UPTC16712_0964 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D UPTC16712_1338 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:clm00270]
D UPTC16712_0765 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D UPTC16712_1235 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D UPTC16712_0289 metC; cystathionine-beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D UPTC16712_1050 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D UPTC16712_0209 pfs; multifunctional 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase / 6-amino-6-deoxyfutalosine hydrolase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D UPTC16712_1104 multi-copper polyphenol oxidoreductase laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D UPTC16712_0906 acd; 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D UPTC16712_0680 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UPTC16712_0531 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D UPTC16712_1405 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D UPTC16712_1396 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UPTC16712_0589 aspB; aspartate aminotransferase, aminotransferase, classes I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D UPTC16712_0836 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UPTC16712_0097 sdaA; L-serine deaminase I K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D UPTC16712_1199 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D UPTC16712_1342 serC; phosphohydroxythreonine aminotransferase / 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:clm00280]
D UPTC16712_1396 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:clm00290]
D UPTC16712_0964 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D UPTC16712_0831 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UPTC16712_0830 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D UPTC16712_0947 ilvC; acetohydroxy acid isomeroreductase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D UPTC16712_1544 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D UPTC16712_1396 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UPTC16712_0786 putative membrane protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:clm00300]
D UPTC16712_1405 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D UPTC16712_0680 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UPTC16712_0531 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D UPTC16712_0634 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D UPTC16712_1401 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D UPTC16712_0258 dapD; tetrahydrodipicolinate succinylase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D UPTC16712_1156 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D UPTC16712_0065 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D UPTC16712_1354 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D UPTC16712_0120 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D UPTC16712_0645 murF; D-alanyl-D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D UPTC16712_1182 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:clm00220]
D UPTC16712_0772 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D UPTC16712_0284 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D UPTC16712_0006 ureB; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D UPTC16712_0005 ureA; fusion of urease beta and gamma subunits K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
D UPTC16712_0722 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D UPTC16712_1005 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UPTC16712_1386 carB; carbamoylphosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D UPTC16712_0369 carA; carbamoylphosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D UPTC16712_0589 aspB; aspartate aminotransferase, aminotransferase, classes I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:clm00330]
D UPTC16712_0764 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D UPTC16712_0892 aguA; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D UPTC16712_0890 aguB; N-carbamoylputrescine amidohydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D UPTC16712_0351 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D UPTC16712_1077 hypothetical protein (NAD-binding domain) K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D UPTC16712_0957 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D UPTC16712_0360 putA; proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D UPTC16712_0589 aspB; aspartate aminotransferase, aminotransferase, classes I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D UPTC16712_1182 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:clm00340]
D UPTC16712_0108 hisG(L); ATP phosphoribosyltransferase, hexameric long form K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D UPTC16712_0114 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D UPTC16712_0112 hisA; N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D UPTC16712_1319 glutamine amidotransferase WbuY K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D UPTC16712_0111 hisH; imidazole glycerol phosphate synthase HisFH, HisH subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D UPTC16712_1318 glycosyl amidation-associated protein WbuZ K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D UPTC16712_0113 hisF; imidazole glycerol phosphate synthase HisFH, HisF subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D UPTC16712_0110 hisBJ; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D UPTC16712_1351 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UPTC16712_0109 hisD; histidinal dehydrogenase / histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:clm00350]
D UPTC16712_0589 aspB; aspartate aminotransferase, aminotransferase, classes I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D UPTC16712_1351 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:clm00360]
D UPTC16712_0589 aspB; aspartate aminotransferase, aminotransferase, classes I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D UPTC16712_1351 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UPTC16712_1182 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00380 Tryptophan metabolism [PATH:clm00380]
D UPTC16712_1164 hydrolase, carbon-nitrogen family K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D UPTC16712_0282 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D UPTC16712_1387 catalase-like protein K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:clm00400]
D UPTC16712_0988 aroG; 2-dehydro-3-deoxyphosphoheptonate aldolase (DAHP synthetase, class II) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D UPTC16712_0712 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D UPTC16712_0236 aroD; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D UPTC16712_0498 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D UPTC16712_0539 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D UPTC16712_1203 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D UPTC16712_1495 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D UPTC16712_0924 hypothetical protein, putative indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D UPTC16712_1338 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D UPTC16712_1352 pheA; chorismate mutase / prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D UPTC16712_0220 tyrA; chorismate mutase / prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D UPTC16712_0589 aspB; aspartate aminotransferase, aminotransferase, classes I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D UPTC16712_1351 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D UPTC16712_1077 hypothetical protein (NAD-binding domain) K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
C 00430 Taurine and hypotaurine metabolism [PATH:clm00430]
D UPTC16712_0647 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D UPTC16712_0648 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D UPTC16712_0305 putative glycerol-3-phosphate cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15]
C 00450 Selenocompound metabolism [PATH:clm00450]
D UPTC16712_0289 metC; cystathionine-beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D UPTC16712_1402 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D UPTC16712_0920 NADPH oxidoreductase, putative flavodoxin quinone reductase FqrB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D UPTC16712_0318 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D UPTC16712_0317 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D UPTC16712_0254 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D UPTC16712_0359 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D UPTC16712_1288 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D UPTC16712_0739 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:clm00460]
D UPTC16712_1164 hydrolase, carbon-nitrogen family K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D UPTC16712_0091 ansB; asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D UPTC16712_1384 L-asparaginase, type 2 (Ntn hydrolase superfamily) K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D UPTC16712_0495 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:clm00470]
D UPTC16712_1138 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D UPTC16712_1182 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D UPTC16712_0642 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D UPTC16712_0722 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D UPTC16712_0090 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D UPTC16712_0275 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D UPTC16712_0752 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D UPTC16712_0065 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D UPTC16712_1354 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:clm00480]
D UPTC16712_0691 leucyl aminopeptidase, peptidase M17 family K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D UPTC16712_0568 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:clm00540]
D UPTC16712_1391 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D UPTC16712_0222 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D UPTC16712_0829 lpxD; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D UPTC16712_1363 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D UPTC16712_1365 lpxB; lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D UPTC16712_0896 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D UPTC16712_0304 kpsF; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D UPTC16712_0543 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D UPTC16712_0664 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D UPTC16712_0898 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D UPTC16712_0997 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D UPTC16712_1247 waaM; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D UPTC16712_0055 eptC; phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D UPTC16712_0315 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D UPTC16712_0484 gmhA; sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D UPTC16712_0483 waaE; D,D-heptose 1-phosphate adenosyltransferase / 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D UPTC16712_0481 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D UPTC16712_0482 waaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D UPTC16712_0314 capsular biosynthesis sugar kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D UPTC16712_0316 nucleotidyl transferase K15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
D UPTC16712_1248 waaC; heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D UPTC16712_1237 waaF; heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:clm00541]
D UPTC16712_0262 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D UPTC16712_1250 gne; UDP-GlcNAc/Glc 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UPTC16712_0311 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D UPTC16712_0313 GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D UPTC16712_0980 glmU; fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D UPTC16712_1300 pseB; UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D UPTC16712_1301 pseC; UDP-2-acetamido-2,6-dideoxy-beta-L-arabino-hex-4-ulose aminotransferase K15895 pseC; UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine transaminase [EC:2.6.1.92]
D UPTC16712_1317 pseH; UDP-4-amino-4,6-dideoxy-beta-L-AltNAc o-acetyltransferase K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202]
D UPTC16712_1316 pseG; UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranosyl transferase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D UPTC16712_0176 pseI; pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D UPTC16712_1312 pseF; CMP-pseudaminic acid synthetase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D UPTC16712_1259 pglF; UDP-N-acetylglucosamine C-6 dehydratase K15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D UPTC16712_1071 aminotransferase, DegT/DnrJ/EryC1/StrS family K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00550 Peptidoglycan biosynthesis [PATH:clm00550]
D UPTC16712_0755 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D UPTC16712_0162 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D UPTC16712_1163 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D UPTC16712_0275 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D UPTC16712_0120 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D UPTC16712_0642 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D UPTC16712_0645 murF; D-alanyl-D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D UPTC16712_0977 ispU; undecaprenyl diphosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D UPTC16712_0032 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D UPTC16712_0276 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D UPTC16712_0766 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D UPTC16712_1074 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D UPTC16712_1502 pbpB; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D UPTC16712_0669 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D UPTC16712_1067 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:clm00552]
D UPTC16712_0032 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D UPTC16712_0307 glycosyltransferase, family 1 (tetratricopeptide repeat protein) K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:clm00543]
D UPTC16712_0765 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:clm00730]
D UPTC16712_1024 thiC; HMP-P synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D UPTC16712_1127 thiD; hydroxymethylpyrimidine kinase / phosphohydroxymethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D UPTC16712_1153 thiF; ThiS adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D UPTC16712_1488 iscS; cysteine desulfurase/aminotransferase (IscS/NifS) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UPTC16712_1151 thiH; ThiGH complex, tyrosine lyase subunit ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D UPTC16712_1347 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D UPTC16712_1152 thiG; ThiGH complex, thiazole synthase subunit ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D UPTC16712_1126 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D UPTC16712_1125 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D UPTC16712_1150 thiamine monophosphate synthase/TENI family protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D UPTC16712_0402 thiL; thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D UPTC16712_0656 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D UPTC16712_0294 transcriptional regulator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:clm00740]
D UPTC16712_1132 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D UPTC16712_0610 ribAB; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D UPTC16712_0232 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D UPTC16712_0544 ribH; 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase, beta subunit) K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D UPTC16712_1103 ribE; 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase, alpha subunit) K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D UPTC16712_0686 ribF; bifunctional riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D UPTC16712_1126 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D UPTC16712_0760 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:clm00750]
D UPTC16712_1342 serC; phosphohydroxythreonine aminotransferase / 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D UPTC16712_0928 pdxA; 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D UPTC16712_0929 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D UPTC16712_0897 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:clm00760]
D UPTC16712_1191 pncBI; nicotinate phosphoribosyltransferase, subgroup A K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D UPTC16712_1372 surE; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D UPTC16712_0420 nadD; nicotinate-mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D UPTC16712_0895 nadE; NAD synthetase, NH3-dependent K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D UPTC16712_1169 cinA; competence/damage-inducible domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D UPTC16712_0211 pncA; pyrazinamidase / nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D UPTC16712_1158 npdA; NAD-dependent protein deacetylase, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D UPTC16712_0658 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:clm00770]
D UPTC16712_0831 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UPTC16712_0830 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D UPTC16712_0947 ilvC; acetohydroxy acid isomeroreductase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D UPTC16712_1544 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D UPTC16712_0487 coaX; pantothenate kinase, type III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D UPTC16712_0979 dfp; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D UPTC16712_0761 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D UPTC16712_0064 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D UPTC16712_0279 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D UPTC16712_1396 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:clm00780]
D UPTC16712_1376 bioC; malonyl-[acp] methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D UPTC16712_0296 fabF; beta-ketoacyl-[acp] synthase II (KASII) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D UPTC16712_0278 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UPTC16712_1392 fabZ; 3-hydroxyacyl-[acp] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D UPTC16712_1377 hypothetical protein (DUF452 domain) K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D UPTC16712_1378 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D UPTC16712_1379 bioA; 7,8-diaminopelargonic acid synthase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D UPTC16712_1380 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D UPTC16712_0166 bioB; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D UPTC16712_0191 birA; biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:clm00790]
D UPTC16712_1483 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D UPTC16712_0999 hypothetical protein (NIF3 domain) K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16]
D UPTC16712_0183 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D UPTC16712_0238 folK; 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D UPTC16712_0683 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D UPTC16712_1041 folC; bifunctional folypolyglutamate synthetase / dihydrofolate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D UPTC16712_1132 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D UPTC16712_0610 ribAB; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D UPTC16712_0985 pabA; aminodeoxychorismate synthase, glutaminase, component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D UPTC16712_0984 pabBC; aminodeoxychorismate synthase, component I / aminodeoxychorismate lyase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D UPTC16712_1415 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D UPTC16712_1416 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D UPTC16712_0743 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D UPTC16712_0011 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D UPTC16712_1417 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D UPTC16712_0152 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D UPTC16712_0348 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D UPTC16712_0716 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D UPTC16712_0756 moeA1; molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D UPTC16712_0347 moeA2; molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D UPTC16712_1540 mobA; molybdenum cofactor guanylyltransferase protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:clm00670]
D UPTC16712_0587 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase / 5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D UPTC16712_0495 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UPTC16712_1474 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D UPTC16712_0549 purH; AICAR transformylase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D UPTC16712_0190 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D UPTC16712_1306 formyltransferase domain-containing protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D UPTC16712_0014 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D UPTC16712_1006 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D UPTC16712_1224 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:clm00860]
D UPTC16712_1295 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D UPTC16712_0788 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D UPTC16712_0585 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D UPTC16712_1133 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D UPTC16712_0785 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D UPTC16712_1124 hemD; uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D UPTC16712_0533 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D UPTC16712_1135 hemN2; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D UPTC16712_1566 hypothetical membrane protein (UPF0093 domain) K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D UPTC16712_1069 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D UPTC16712_0677 chuZ; iron-responsive cellular heme oxygenase K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:clm00130]
D UPTC16712_1420 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D UPTC16712_0784 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D UPTC16712_0760 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D UPTC16712_1344 ubiE; bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / S-adenosylmethionine:2-DMK methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D UPTC16712_1293 mqnA2; 6-amino-6-deoxyfutalosine synthase K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D UPTC16712_0429 menaquinone biosynthesis protein, SCO4494 family K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D UPTC16712_0235 metallo-dependent hydrolase, subgroup D K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D UPTC16712_0209 pfs; multifunctional 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase / 6-amino-6-deoxyfutalosine hydrolase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D UPTC16712_0699 mqnC; dehypoxanthinylfutalosine cyclase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D UPTC16712_0160 mqnD; 1,4-dihydroxy-6-naphthoate synthase K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:clm00900]
D UPTC16712_1347 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D UPTC16712_1536 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D UPTC16712_0256 ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D UPTC16712_1058 ispE; 4-diphosphocytidyl-2-C-methylerythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D UPTC16712_1192 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D UPTC16712_1202 ispH; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D UPTC16712_0760 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D UPTC16712_0123 ispA; geranyl diphosphate synthase / farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D UPTC16712_0789 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D UPTC16712_0977 ispU; undecaprenyl diphosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D UPTC16712_0124 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D UPTC16712_0311 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 01054 Nonribosomal peptide structures [PATH:clm01054]
D UPTC16712_0752 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:clm00261]
D UPTC16712_0318 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D UPTC16712_0317 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D UPTC16712_0254 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D UPTC16712_0680 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UPTC16712_0531 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D UPTC16712_0634 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D UPTC16712_1401 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:clm00521]
D UPTC16712_0268 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D UPTC16712_0311 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:clm00401]
D UPTC16712_0220 tyrA; chorismate mutase / prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D UPTC16712_0589 aspB; aspartate aminotransferase, aminotransferase, classes I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D UPTC16712_1351 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D UPTC16712_0208 fabD; malonyl-CoA-[acp] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D UPTC16712_0278 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D UPTC16712_0295 acpP1; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:clm00999]
D UPTC16712_1050 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D UPTC16712_0498 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D UPTC16712_1395 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00627 Aminobenzoate degradation [PATH:clm00627]
D UPTC16712_1164 hydrolase, carbon-nitrogen family K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D UPTC16712_0760 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D UPTC16712_1395 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D UPTC16712_1164 hydrolase, carbon-nitrogen family K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation
D UPTC16712_0006 ureB; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D UPTC16712_0005 ureA; fusion of urease beta and gamma subunits K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D UPTC16712_1395 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:clm03020]
D UPTC16712_0452 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D UPTC16712_0453 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D UPTC16712_0106 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D UPTC16712_0624 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:clm03010]
D UPTC16712_1201 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D UPTC16712_1096 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D UPTC16712_0076 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D UPTC16712_0105 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D UPTC16712_0087 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D UPTC16712_0950 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D UPTC16712_0456 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D UPTC16712_0084 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D UPTC16712_0382 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D UPTC16712_0069 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D UPTC16712_0104 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D UPTC16712_0455 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D UPTC16712_0103 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D UPTC16712_0083 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D UPTC16712_0942 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D UPTC16712_0994 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D UPTC16712_0079 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D UPTC16712_0952 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D UPTC16712_0074 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D UPTC16712_0020 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D UPTC16712_1558 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D UPTC16712_0449 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D UPTC16712_0073 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D UPTC16712_0070 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D UPTC16712_0071 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D UPTC16712_0082 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D UPTC16712_0085 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D UPTC16712_0451 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D UPTC16712_0773 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D UPTC16712_0450 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D UPTC16712_0448 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D UPTC16712_0381 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D UPTC16712_0080 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D UPTC16712_0088 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D UPTC16712_0077 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D UPTC16712_0107 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D UPTC16712_0086 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D UPTC16712_0990 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D UPTC16712_0044 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D UPTC16712_0186 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D UPTC16712_0075 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D UPTC16712_0072 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D UPTC16712_0081 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D UPTC16712_1357 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D UPTC16712_0187 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D UPTC16712_1028 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D UPTC16712_0078 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D UPTC16712_1411 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D UPTC16712_1329 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D UPTC16712_0444 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D UPTC16712_0557 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D UPTC16712_0043 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D UPTC16712_0102 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D UPTC16712_0465 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UPTC16712_1451 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UPTC16712_0521 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UPTC16712_0468 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UPTC16712_0524 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UPTC16712_1448 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UPTC16712_0469 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UPTC16712_0525 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UPTC16712_1447 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:clm00970]
D UPTC16712_0466 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UPTC16712_1450 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UPTC16712_0522 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UPTC16712_0068 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UPTC16712_1470 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UPTC16712_1469 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UPTC16712_0592 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UPTC16712_0602 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UPTC16712_0535 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D UPTC16712_0518 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D UPTC16712_1546 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D UPTC16712_0611 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UPTC16712_0058 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UPTC16712_1492 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UPTC16712_0520 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UPTC16712_0441 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UPTC16712_0758 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UPTC16712_1548 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UPTC16712_1471 tRNA-His K14226 tRNA-His; tRNA His
D UPTC16712_0467 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UPTC16712_1449 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UPTC16712_0523 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UPTC16712_1213 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UPTC16712_0841 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UPTC16712_1547 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UPTC16712_1468 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UPTC16712_0516 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UPTC16712_0519 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UPTC16712_0612 tRNA-Met K14230 tRNA-Met; tRNA Met
D UPTC16712_0615 tRNA-Met K14230 tRNA-Met; tRNA Met
D UPTC16712_0144 tRNA-Met K14230 tRNA-Met; tRNA Met
D UPTC16712_0298 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D UPTC16712_1472 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D UPTC16712_1545 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UPTC16712_0142 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UPTC16712_1266 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UPTC16712_0439 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UPTC16712_0442 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UPTC16712_0445 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D UPTC16712_0440 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D UPTC16712_0517 tRNA-Val K14237 tRNA-Val; tRNA Val
D UPTC16712_1571 tRNA-Val K14237 tRNA-Val; tRNA Val
D UPTC16712_0364 selC; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D UPTC16712_1295 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D UPTC16712_0732 gltX1; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D UPTC16712_1167 gatA; Glu-tRNA(Gln) amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D UPTC16712_1218 gatB; Glu-tRNA(Gln) amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D UPTC16712_0491 gatC; Glu-tRNA(Gln) amidotransferase, subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D UPTC16712_1072 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D UPTC16712_0657 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D UPTC16712_1000 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D UPTC16712_0607 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D UPTC16712_0033 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UPTC16712_0537 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D UPTC16712_1288 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D UPTC16712_0638 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D UPTC16712_0739 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D UPTC16712_0190 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D UPTC16712_1306 formyltransferase domain-containing protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D UPTC16712_0653 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D UPTC16712_1044 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UPTC16712_1168 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D UPTC16712_0494 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D UPTC16712_1089 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UPTC16712_0787 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UPTC16712_0763 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UPTC16712_1205 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D UPTC16712_1204 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D UPTC16712_0626 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UPTC16712_0538 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:clm03060]
D UPTC16712_0089 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY
D UPTC16712_0446 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE
D UPTC16712_1509 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG
D UPTC16712_1047 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D UPTC16712_1046 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D UPTC16712_1048 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D UPTC16712_0554 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UPTC16712_0529 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D UPTC16712_0995 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D UPTC16712_1585 srpB; bacterial signal recognition particle RNA (4.5S RNA) K01983 ffs; SRP RNA
D UPTC16712_1222 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D UPTC16712_1090 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D UPTC16712_0672 twin arginine translocation system, TatB family protein K03117 tatB; sec-independent protein translocase protein TatB
D UPTC16712_0671 tatC; twin arginine translocation system, TatC protein K03118 tatC; sec-independent protein translocase protein TatC
D UPTC16712_0588 lepB; leader peptidase (signal peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89]
D UPTC16712_1567 lspA; prolipoprotein signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:clm04122]
D UPTC16712_1488 iscS; cysteine desulfurase/aminotransferase (IscS/NifS) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UPTC16712_0246 mnmA; tRNA U34 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D UPTC16712_1500 putative tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D UPTC16712_0348 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D UPTC16712_1417 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D UPTC16712_0349 moaD; molybdopterin synthase, small subunit K03636 moaD; sulfur-carrier protein
D UPTC16712_0152 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D UPTC16712_0716 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D UPTC16712_1154 thiS; thiamin biosynthesis protein K03154 thiS; sulfur carrier protein
D UPTC16712_1153 thiF; ThiS adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:clm03018]
D UPTC16712_0679 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D UPTC16712_0158 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UPTC16712_0515 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D UPTC16712_0948 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D UPTC16712_0477 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D UPTC16712_1225 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D UPTC16712_0023 mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D UPTC16712_0933 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D UPTC16712_1033 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UPTC16712_1021 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D UPTC16712_0902 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:clm03030]
D UPTC16712_1026 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D UPTC16712_0888 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UPTC16712_0476 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UPTC16712_0682 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UPTC16712_0949 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UPTC16712_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UPTC16712_1234 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D UPTC16712_1499 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D UPTC16712_0951 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D UPTC16712_1497 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D UPTC16712_0094 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D UPTC16712_0684 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:clm03410]
D UPTC16712_0911 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D UPTC16712_0132 ung; uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D UPTC16712_0137 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D UPTC16712_0559 uracil-DNA glycosylase family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D UPTC16712_0056 xth; exodeoxyribonuclease III (exonuclease III) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D UPTC16712_0016 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UPTC16712_0684 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:clm03420]
D UPTC16712_1038 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D UPTC16712_1341 uvrA; UvrABC nucleotide excision repair complex, subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D UPTC16712_1197 uvrB; UvrABC nucleotide excision repair complex, subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D UPTC16712_0504 uvrC; UvrABC nucleotide excision repair complex, subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D UPTC16712_0800 rep; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UPTC16712_1055 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UPTC16712_0684 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:clm03430]
D UPTC16712_1161 mutS2; DNA mismatch binding protein, MutS2 family K07456 mutS2; DNA mismatch repair protein MutS2
D UPTC16712_0800 rep; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UPTC16712_1055 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UPTC16712_1343 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D UPTC16712_1165 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D UPTC16712_0016 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UPTC16712_0951 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D UPTC16712_0888 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UPTC16712_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UPTC16712_0476 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UPTC16712_0949 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UPTC16712_0682 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UPTC16712_1026 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D UPTC16712_0684 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:clm03440]
D UPTC16712_0016 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UPTC16712_0951 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D UPTC16712_0502 recR; recombination protein K06187 recR; recombination protein RecR
D UPTC16712_0159 recA; recombinase K03553 recA; recombination protein RecA
D UPTC16712_0641 ruvA; RuvABC resolvasome, subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D UPTC16712_1276 ruvB; RuvABC resolvasome, subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D UPTC16712_1583 ruvC; RuvABC resolvasome, subunit RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D UPTC16712_0701 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D UPTC16712_0379 addA; exonuclease V, helicase AddA K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D UPTC16712_0888 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UPTC16712_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UPTC16712_0476 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UPTC16712_0949 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UPTC16712_0682 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UPTC16712_1026 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D UPTC16712_1193 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:clm02010]
D UPTC16712_1283 modA; molybdenum ABC transporter ModABC, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D UPTC16712_0464 modB; molybdenum ABC transporter ModABC, permease protein K02018 modB; molybdate transport system permease protein
D UPTC16712_1285 modC; molybdenum ABC transporter ModABC, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D UPTC16712_1529 putative iron(III) ABC transporter, periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D UPTC16712_1528 putative iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D UPTC16712_1527 putative iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D UPTC16712_1281 lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D UPTC16712_0127 lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D UPTC16712_0125 lipid asymmetry ABC transporter MlaABCDEF, permease component MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D UPTC16712_0126 lipid asymmetry ABC transporter MlaABCDEF, ATPase component MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D UPTC16712_0819 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D UPTC16712_0818 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D UPTC16712_0817 pstA; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D UPTC16712_0816 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D UPTC16712_0598 cjaC; amino acid ABC transporter, periplasmic arginine/lysine/histidine-binding lipoprotein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D UPTC16712_0605 amino acid ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D UPTC16712_0604 amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D UPTC16712_1113 livJ; high-affinity branched-chain amino acid transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D UPTC16712_1114 livK; high-affinity branched-chain amino acid transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D UPTC16712_1115 livH; high-affinity branched-chain amino acid transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D UPTC16712_1116 livM; high-affinity branched-chain amino acid transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D UPTC16712_1117 livG; high-affinity branched-chain amino acid transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D UPTC16712_1118 livF; high-affinity branched-chain amino acid transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D UPTC16712_0649 metQ; DL-methionine ABC transporter MetINQ, substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D UPTC16712_0651 metI; DL-methionine ABC transporter MetINQ, permease protein K02072 metI; D-methionine transport system permease protein
D UPTC16712_0652 metN; DL-methionine ABC transporter MetINQ, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D UPTC16712_0048 znuA; zinc ABC transporter ZnuABC, periplasmic zinc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D UPTC16712_0046 znuB; zinc ABC transporter ZnuABC, membrane protein K09816 znuB; zinc transport system permease protein
D UPTC16712_0047 znuC; zinc ABC transporter ZnuABC, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D UPTC16712_0302 kpsE; capsular polysaccharide export system, inner membrane protein K10107 kpsE; capsular polysaccharide transport system permease protein
D UPTC16712_0300 kpsM; capsular polysaccharide export system, inner membrane protein K09688 kpsM; capsular polysaccharide transport system permease protein
D UPTC16712_0301 kpsT; capsular polysaccharide export system, ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D UPTC16712_0975 putative lipooligosaccharide transport system, permease component (LptF family) K07091 lptF; lipopolysaccharide export system permease protein
D UPTC16712_1355 putative lipooligosaccharide transport system, permease component (LptG family) K11720 lptG; lipopolysaccharide export system permease protein
D UPTC16712_0769 putative lipooligosaccharide transport system, ATP-binding component (LptB family) K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D UPTC16712_0621 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D UPTC16712_0620 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D UPTC16712_0637 msbA; lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D UPTC16712_0914 macB; macrolide-specific efflux protein, ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D UPTC16712_1532 multidrug ABC transporter, membrane protein/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:clm03070]
D UPTC16712_0387 ctsD; transformation system, type II secretion system secretin protein CtsD K02453 gspD; general secretion pathway protein D
D UPTC16712_0390 ctsF; transformation system, type II secretion system membrane protein CtsF K02455 gspF; general secretion pathway protein F
D UPTC16712_1194 putative type II secretion system protein K02456 gspG; general secretion pathway protein G
D UPTC16712_1533 ctsG; transformation system, putative pseudopilin protein CtsG K02456 gspG; general secretion pathway protein G
D UPTC16712_0389 ctsE; transformation system, type II secretion system ATPase CtsE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D UPTC16712_1047 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D UPTC16712_1046 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D UPTC16712_0446 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE
D UPTC16712_1509 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG
D UPTC16712_0089 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY
D UPTC16712_1048 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D UPTC16712_0554 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UPTC16712_0529 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D UPTC16712_1222 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D UPTC16712_0995 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D UPTC16712_1090 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D UPTC16712_0672 twin arginine translocation system, TatB family protein K03117 tatB; sec-independent protein translocase protein TatB
D UPTC16712_0671 tatC; twin arginine translocation system, TatC protein K03118 tatC; sec-independent protein translocase protein TatC
D UPTC16712_0855 tssI1; type VI secretion system, secreted protein K11904 vgrG; type VI secretion system secreted protein VgrG
D UPTC16712_0869 tssI2; type VI secretion system, secreted protein K11904 vgrG; type VI secretion system secreted protein VgrG
D UPTC16712_0854 tssD; type VI secretion system, secreted hemolysin co-regulated protein (Hcp) K11903 hcp; type VI secretion system secreted protein Hcp
D UPTC16712_0877 tssJ; type VI secretion system, membrane platform protein K11906 vasD; type VI secretion system protein VasD
D UPTC16712_0853 tssM; type VI secretion system, membrane platform protein K11891 impL; type VI secretion system protein ImpL
D UPTC16712_0875 tssL; type VI secretion system, membrane platform protein K11892 impK; type VI secretion system protein ImpK
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:clm02020]
D UPTC16712_0819 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D UPTC16712_0797 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D UPTC16712_0573 flaC; flagellar secreted protein K02406 fliC; flagellin
D UPTC16712_0168 flaA; flagellin K02406 fliC; flagellin
D UPTC16712_0169 flaB; flagellin K02406 fliC; flagellin
D UPTC16712_0242 fliA; RNA polymerase sigma28 factor K02405 fliA; RNA polymerase sigma factor FliA
D UPTC16712_1333 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D UPTC16712_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D UPTC16712_0134 two-component system response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D UPTC16712_0567 dcuB; anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D UPTC16712_1057 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D UPTC16712_0428 hypothetical protein, possible uridylyltransferase GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D UPTC16712_1005 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UPTC16712_1181 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D UPTC16712_0768 rpoN; RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D UPTC16712_0729 hydC; [NiFe] hydrogenase, cytochrome b subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D UPTC16712_0697 cheR; MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D UPTC16712_0436 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1129 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_0548 MCP-domain signal transduction protein (DUF3365 domain) K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_0099 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_0149 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1215 PAS sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1323 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1324 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1549 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1360 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D UPTC16712_1361 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D UPTC16712_1260 cheY; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D UPTC16712_0696 cheB'; MCP protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D UPTC16712_1362 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D UPTC16712_1099 petA; ubiquinol cytochrome c oxidoreductase PetABC, 2Fe-2S subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D UPTC16712_1098 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D UPTC16712_1097 petC; ubiquinol cytochrome c oxidoreductase PetABC, membrane-bound cytochrome c subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D UPTC16712_0480 cccA; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c
D UPTC16712_0371 ccoN; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D UPTC16712_0372 ccoO; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D UPTC16712_0373 ccoQ; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D UPTC16712_0374 ccoP; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D UPTC16712_1128 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D UPTC16712_1099 petA; ubiquinol cytochrome c oxidoreductase PetABC, 2Fe-2S subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:clm02024]
D UPTC16712_0988 aroG; 2-dehydro-3-deoxyphosphoheptonate aldolase (DAHP synthetase, class II) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D UPTC16712_1113 livJ; high-affinity branched-chain amino acid transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D UPTC16712_1114 livK; high-affinity branched-chain amino acid transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D UPTC16712_1115 livH; high-affinity branched-chain amino acid transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D UPTC16712_1116 livM; high-affinity branched-chain amino acid transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D UPTC16712_1117 livG; high-affinity branched-chain amino acid transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D UPTC16712_1118 livF; high-affinity branched-chain amino acid transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D UPTC16712_1132 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D UPTC16712_0232 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D UPTC16712_1563 cmeC; multidrug efflux system CmeABC, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
D UPTC16712_0134 two-component system response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D UPTC16712_0554 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UPTC16712_0446 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE
D UPTC16712_1509 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG
D UPTC16712_0089 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY
D UPTC16712_1048 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D UPTC16712_0529 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D UPTC16712_1222 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D UPTC16712_0995 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:clm02030]
D UPTC16712_0436 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1129 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_0548 MCP-domain signal transduction protein (DUF3365 domain) K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_0099 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_0149 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1215 PAS sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1323 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1324 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1549 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1361 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D UPTC16712_1360 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D UPTC16712_1260 cheY; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D UPTC16712_0696 cheB'; MCP protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D UPTC16712_1362 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D UPTC16712_0697 cheR; MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D UPTC16712_1349 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D UPTC16712_0243 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D UPTC16712_0244 fliY; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D UPTC16712_0178 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D UPTC16712_1333 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D UPTC16712_1332 motB; flagellar motor protein K02557 motB; chemotaxis protein MotB
D UPTC16712_0907 hypothetical protein (OmpA/MotB domain) K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:clm02040]
D UPTC16712_1066 fliE; flagellar proximal rod protein K02408 fliE; flagellar hook-basal body complex protein FliE
D UPTC16712_1350 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D UPTC16712_1349 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D UPTC16712_1348 fliH; flagellar export apparatus, flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D UPTC16712_1484 fliI; flagellar export apparatus, flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D UPTC16712_1522 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D UPTC16712_0280 fliL; flagellar basal body-associated protein K02415 fliL; flagellar protein FliL
D UPTC16712_0243 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D UPTC16712_0244 fliY; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D UPTC16712_0178 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D UPTC16712_0982 fliP; flagellar export apparatus, flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D UPTC16712_0161 fliQ; flagellar export apparatus, flagellar basal body protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D UPTC16712_1093 fliR; flagellar export apparatus, flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D UPTC16712_0940 flhA; flagellar export apparatus, flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D UPTC16712_1322 flhB; flagellar export apparatus, flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D UPTC16712_0759 flgA; flagellar basal body P-ring biosynthesis protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D UPTC16712_1064 flgB; flagellar proximal rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D UPTC16712_1065 flgC; flagellar proximal rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D UPTC16712_1523 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D UPTC16712_0115 flgE2; flagellar hook protein, epsilonproteobacterial variant K02390 flgE; flagellar hook protein FlgE
D UPTC16712_1524 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D UPTC16712_1019 flgG2; flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D UPTC16712_1018 flgG; flagellar basal body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D UPTC16712_0646 flgH; flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D UPTC16712_0397 flgI; flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D UPTC16712_0396 hypothetical protein, possible flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D UPTC16712_0393 flgK; flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D UPTC16712_0840 flgL; flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D UPTC16712_1145 flgP; LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP
D UPTC16712_1144 flgQ; flagellar-associated protein FlgQ K24346 flgQ; flagellar motility protein FlgQ
D UPTC16712_0573 flaC; flagellar secreted protein K02406 fliC; flagellin
D UPTC16712_0168 flaA; flagellin K02406 fliC; flagellin
D UPTC16712_0169 flaB; flagellin K02406 fliC; flagellin
D UPTC16712_0782 fliD; flagellar filament cap protein K02407 fliD; flagellar hook-associated protein 2
D UPTC16712_0781 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D UPTC16712_1333 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D UPTC16712_1332 motB; flagellar motor protein K02557 motB; chemotaxis protein MotB
D UPTC16712_0907 hypothetical protein (OmpA/MotB domain) K02557 motB; chemotaxis protein MotB
D UPTC16712_1020 rpoD; RNA polymerase sigma70 factor K03086 rpoD; RNA polymerase primary sigma factor
D UPTC16712_0768 rpoN; RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D UPTC16712_0242 fliA; RNA polymerase sigma28 factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D UPTC16712_0158 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:clm01501]
D UPTC16712_1561 cmeA; multidrug efflux system CmeABC, periplasmic fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D UPTC16712_1562 cmeB; multidrug efflux system CmeABC, inner membrane drug transporter CmeB K18138 acrB; multidrug efflux pump
D UPTC16712_1563 cmeC; multidrug efflux system CmeABC, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
D UPTC16712_1074 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D UPTC16712_0669 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D UPTC16712_1067 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D UPTC16712_1375 class D beta-lactamase K22333 blaOXA-493; beta-lactamase class D OXA-493 [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:clm01502]
D UPTC16712_0642 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D UPTC16712_1138 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D UPTC16712_0645 murF; D-alanyl-D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D UPTC16712_0276 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D UPTC16712_0766 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:clm01503]
D UPTC16712_0055 eptC; phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D UPTC16712_0628 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UPTC16712_0797 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D UPTC16712_1561 cmeA; multidrug efflux system CmeABC, periplasmic fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D UPTC16712_1562 cmeB; multidrug efflux system CmeABC, inner membrane drug transporter CmeB K18138 acrB; multidrug efflux pump
D UPTC16712_1391 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:clm01000]
C 01001 Protein kinases [BR:clm01001]
D UPTC16712_0799 cprS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D UPTC16712_1106 dccS; two-component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D UPTC16712_0133 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D UPTC16712_0501 racS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D UPTC16712_0601 flgS; two-component system, sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D UPTC16712_1361 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:clm01009]
D UPTC16712_0718 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D UPTC16712_1359 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:clm01002]
D UPTC16712_1567 lspA; prolipoprotein signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D UPTC16712_0976 peptidase A24 N-terminal domain protein, putative prepilin signal peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D UPTC16712_0730 hydD; [NiFe] hydrogenase maturation protease HydD K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D UPTC16712_0508 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D UPTC16712_1400 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D UPTC16712_0427 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D UPTC16712_0889 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D UPTC16712_1053 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D UPTC16712_0691 leucyl aminopeptidase, peptidase M17 family K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D UPTC16712_1156 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D UPTC16712_1369 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D UPTC16712_0568 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D UPTC16712_0098 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D UPTC16712_0237 pepQ; X-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D UPTC16712_1262 ftsH2; integral membrane ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D UPTC16712_0715 ftsH1; integral membrane ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D UPTC16712_0631 RseP-like zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D UPTC16712_0797 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D UPTC16712_1481 clpP; ATP-dependent ClpAP/ClpXP protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D UPTC16712_0960 lon; DNA-binding, ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D UPTC16712_0588 lepB; leader peptidase (signal peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89]
D UPTC16712_0725 ctpA; carboxyl-terminal protease family protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D UPTC16712_0233 sppA; signal peptide peptidase protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D UPTC16712_0812 pepE2; (alpha)-aspartyl dipeptidase K05995 pepE; dipeptidase E [EC:3.4.13.21]
D UPTC16712_1371 pepE1; (alpha)-aspartyl dipeptidase K05995 pepE; dipeptidase E [EC:3.4.13.21]
D UPTC16712_0774 hslV; heat shock protein HslVU, ATP-dependent protease subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D UPTC16712_1384 L-asparaginase, type 2 (Ntn hydrolase superfamily) K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D UPTC16712_1003 collagenase-like peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D UPTC16712_1503 alpha-2-macroglobulin domain-containing protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:clm01003]
D UPTC16712_1502 pbpB; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D UPTC16712_1074 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D UPTC16712_1241 beta-1,4-N-acetylgalactosaminyltransferase K13689 cgtA; beta-1,4-N-acetylgalactosaminyltransferase [EC:2.4.1.-]
D UPTC16712_1255 pglA; N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase K15914 pglA; N,N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase [EC:2.4.1.290]
D UPTC16712_1252 pglH; GalNAc-alpha-(1,4)-GalNAc-alpha-(1, 3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase K17249 pglH; GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase [EC:2.4.1.292]
D UPTC16712_1253 pglJ; N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase K17248 pglJ; N-acetylgalactosamine-N,N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase [EC:2.4.1.291]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:clm01005]
D UPTC16712_1391 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D UPTC16712_1365 lpxB; lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D UPTC16712_0222 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D UPTC16712_0829 lpxD; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D UPTC16712_1363 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D UPTC16712_0896 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D UPTC16712_1247 waaM; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D UPTC16712_0997 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D UPTC16712_0055 eptC; phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D UPTC16712_0543 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D UPTC16712_0898 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D UPTC16712_0664 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D UPTC16712_0304 kpsF; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D UPTC16712_1248 waaC; heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D UPTC16712_1237 waaF; heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D UPTC16712_0315 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D UPTC16712_0484 gmhA; sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D UPTC16712_0481 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D UPTC16712_0483 waaE; D,D-heptose 1-phosphate adenosyltransferase / 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D UPTC16712_0482 waaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:clm01011]
D UPTC16712_0755 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D UPTC16712_0162 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D UPTC16712_1163 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D UPTC16712_0275 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D UPTC16712_0120 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D UPTC16712_0642 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D UPTC16712_1138 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D UPTC16712_0090 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D UPTC16712_0276 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D UPTC16712_0766 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D UPTC16712_0032 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D UPTC16712_0639 murJ; lipid II flippase K03980 murJ; putative peptidoglycan lipid II flippase
D UPTC16712_1074 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D UPTC16712_1502 pbpB; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D UPTC16712_0669 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D UPTC16712_1067 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D UPTC16712_0734 slt; soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D UPTC16712_0662 mltD; membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D UPTC16712_0838 YceG-like protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D UPTC16712_0663 rlpA; rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D UPTC16712_0628 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:clm01004]
D UPTC16712_0208 fabD; malonyl-CoA-[acp] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D UPTC16712_1309 3-oxoacyl-[acp] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D UPTC16712_1331 fabH; beta-ketoacyl-[acp] synthase III (KASIII) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D UPTC16712_0296 fabF; beta-ketoacyl-[acp] synthase II (KASII) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D UPTC16712_0278 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UPTC16712_1392 fabZ; 3-hydroxyacyl-[acp] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D UPTC16712_1270 acyl-CoA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D UPTC16712_1330 plsX; acyl phosphate synthase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D UPTC16712_0184 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UPTC16712_0720 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:clm01008]
D UPTC16712_0752 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:clm01006]
D UPTC16712_0123 ispA; geranyl diphosphate synthase / farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D UPTC16712_0789 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D UPTC16712_0977 ispU; undecaprenyl diphosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D UPTC16712_1421 miaA; tRNA(i6A37) synthase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D UPTC16712_1420 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:clm01007]
D UPTC16712_1295 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D UPTC16712_0732 gltX1; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D UPTC16712_0626 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UPTC16712_0538 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D UPTC16712_0638 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D UPTC16712_1089 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UPTC16712_0739 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D UPTC16712_1168 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D UPTC16712_0653 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D UPTC16712_1044 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UPTC16712_0494 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D UPTC16712_0657 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D UPTC16712_0763 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UPTC16712_1000 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D UPTC16712_0607 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D UPTC16712_0537 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D UPTC16712_0787 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UPTC16712_0033 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UPTC16712_1072 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D UPTC16712_1205 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D UPTC16712_1204 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D UPTC16712_0589 aspB; aspartate aminotransferase, aminotransferase, classes I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D UPTC16712_1406 aspartate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D UPTC16712_1351 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UPTC16712_1378 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D UPTC16712_1379 bioA; 7,8-diaminopelargonic acid synthase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D UPTC16712_0585 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D UPTC16712_1182 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D UPTC16712_1396 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UPTC16712_0984 pabBC; aminodeoxychorismate synthase, component I / aminodeoxychorismate lyase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D UPTC16712_1342 serC; phosphohydroxythreonine aminotransferase / 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D UPTC16712_1071 aminotransferase, DegT/DnrJ/EryC1/StrS family K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:clm00194]
D UPTC16712_0200 atpC; ATP synthase, F1 complex, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D UPTC16712_0199 atpD; ATP synthase, F1 complex, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D UPTC16712_0198 atpG; ATP synthase, F1 complex, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D UPTC16712_0197 atpA; ATP synthase, F1 complex, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D UPTC16712_0196 atpH; ATP synthase, F1 complex, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D UPTC16712_0194 atpF'; ATP synthase, F0 complex, b' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D UPTC16712_0195 atpF; ATP synthase, F0 complex, b subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D UPTC16712_1212 atpE; ATP synthase, F0 complex, c subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D UPTC16712_1219 atpB; ATP synthase, F0 complex, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:clm03000]
D UPTC16712_1560 cmeR; multidrug efflux system CmeABC transcriptional regulator, TetR family K18992 cmeR; TetR/AcrR family transcriptional regulator, cmeABC operon repressor
D UPTC16712_0795 hspR; heat shock transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D UPTC16712_0493 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D UPTC16712_1346 perR; peroxide stress transcriptional regulator PerR K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D UPTC16712_0802 transcriptional regulator, Crp family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D UPTC16712_0674 arsR; transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D UPTC16712_0191 birA; biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D UPTC16712_0357 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D UPTC16712_0247 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator
D UPTC16712_0360 putA; proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D UPTC16712_1110 hypothetical protein, putative transcriptional regulator K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D UPTC16712_0193 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UPTC16712_0936 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D UPTC16712_0294 transcriptional regulator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D UPTC16712_0216 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:clm03021]
D UPTC16712_0106 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D UPTC16712_0452 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D UPTC16712_0453 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D UPTC16712_0624 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D UPTC16712_1020 rpoD; RNA polymerase sigma70 factor K03086 rpoD; RNA polymerase primary sigma factor
D UPTC16712_0768 rpoN; RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D UPTC16712_0242 fliA; RNA polymerase sigma28 factor K02405 fliA; RNA polymerase sigma factor FliA
D UPTC16712_0328 nusA; transcription termination factor K02600 nusA; transcription termination/antitermination protein NusA
D UPTC16712_0545 nusB; transcription antitermination protein K03625 nusB; transcription antitermination protein NusB
D UPTC16712_0447 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D UPTC16712_0216 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D UPTC16712_1364 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D UPTC16712_0477 rho; transcription termination factor K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:clm03019]
D UPTC16712_1496 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D UPTC16712_0023 mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D UPTC16712_1225 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D UPTC16712_0948 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D UPTC16712_0158 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UPTC16712_0515 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D UPTC16712_0477 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D UPTC16712_0933 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D UPTC16712_1033 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UPTC16712_1021 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D UPTC16712_0902 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D UPTC16712_0679 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D UPTC16712_1057 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
C 03041 Spliceosome
C 03011 Ribosome [BR:clm03011]
D UPTC16712_1201 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D UPTC16712_1096 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D UPTC16712_0076 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D UPTC16712_0105 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D UPTC16712_0087 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D UPTC16712_0950 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D UPTC16712_0456 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D UPTC16712_0084 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D UPTC16712_0382 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D UPTC16712_0069 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D UPTC16712_0104 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D UPTC16712_0455 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D UPTC16712_0103 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D UPTC16712_0083 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D UPTC16712_0942 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D UPTC16712_0994 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D UPTC16712_0079 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D UPTC16712_0952 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D UPTC16712_0074 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D UPTC16712_0020 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D UPTC16712_1558 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D UPTC16712_0449 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D UPTC16712_0073 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D UPTC16712_0070 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D UPTC16712_0071 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D UPTC16712_0082 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D UPTC16712_0085 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D UPTC16712_0773 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D UPTC16712_0450 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D UPTC16712_0448 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D UPTC16712_0451 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D UPTC16712_0381 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D UPTC16712_0080 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D UPTC16712_0088 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D UPTC16712_0077 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D UPTC16712_0107 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D UPTC16712_0086 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D UPTC16712_0990 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D UPTC16712_0044 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D UPTC16712_0186 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D UPTC16712_0075 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D UPTC16712_0072 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D UPTC16712_0081 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D UPTC16712_0187 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D UPTC16712_1028 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D UPTC16712_0078 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D UPTC16712_1411 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D UPTC16712_1329 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D UPTC16712_0444 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D UPTC16712_0557 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D UPTC16712_0043 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D UPTC16712_0102 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D UPTC16712_1357 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D UPTC16712_0469 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UPTC16712_0525 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UPTC16712_1447 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UPTC16712_0465 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UPTC16712_1451 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UPTC16712_0521 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UPTC16712_0468 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UPTC16712_0524 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UPTC16712_1448 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:clm03009]
D UPTC16712_1496 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D UPTC16712_0776 era; GTP-binding protein K03595 era; GTPase
D UPTC16712_0188 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D UPTC16712_0216 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D UPTC16712_0328 nusA; transcription termination factor K02600 nusA; transcription termination/antitermination protein NusA
D UPTC16712_0545 nusB; transcription antitermination protein K03625 nusB; transcription antitermination protein NusB
D UPTC16712_0447 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D UPTC16712_0024 rsmA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D UPTC16712_0943 tRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D UPTC16712_1412 rsmE; 16S rRNA m3U1498 methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D UPTC16712_1131 gidB; 16S rRNA m7G527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D UPTC16712_1186 rsmH; 16S rRNA m4C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D UPTC16712_1410 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D UPTC16712_0685 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D UPTC16712_1409 rRNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D UPTC16712_0217 SPOUT methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D UPTC16712_0026 rlmN; 23S rRNA m2A2503 methyltransferase / tRNA m2A37 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D UPTC16712_0021 rluB; 23S rRNA pseudouridine 2605 synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D UPTC16712_0996 rluA; 23S rRNA and tRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D UPTC16712_0617 rluD; 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D UPTC16712_0028 23S rRNA pseudouridine synthase, RluD family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D UPTC16712_1305 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D UPTC16712_0992 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D UPTC16712_0270 radical SAM methylthiotransferase, MiaB/RimO family K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D UPTC16712_1261 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D UPTC16712_0944 Holliday junction resolvase-like protein (UPF0081 domain) K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D UPTC16712_0540 engA; GTP-binding protein K03977 engA; GTPase
D UPTC16712_0625 spoT; ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D UPTC16712_0227 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D UPTC16712_0228 hypothetical protein (DUF150 domain) K09748 rimP; ribosome maturation factor RimP
D UPTC16712_0421 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D UPTC16712_0744 metal-dependent hydrolase (UPF0054 domain) K07042 ybeY; probable rRNA maturation factor
D UPTC16712_1036 raiA; translation inhibitor protein RaiA K05808 hpf; ribosome hibernation promoting factor
D UPTC16712_0690 ychF; GTP-binding protein, putative GTP-dependent translation factor K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:clm03016]
D UPTC16712_1007 cca; multifunctional tRNA nucleotidyl transferase / 2'3'-cyclic phosphodiesterase / 2' nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D UPTC16712_1295 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D UPTC16712_0787 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UPTC16712_1168 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D UPTC16712_1044 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UPTC16712_0739 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D UPTC16712_1089 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UPTC16712_0494 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D UPTC16712_0657 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D UPTC16712_1072 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D UPTC16712_0033 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UPTC16712_0537 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D UPTC16712_0638 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D UPTC16712_0653 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D UPTC16712_0763 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UPTC16712_1205 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D UPTC16712_1204 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D UPTC16712_0626 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UPTC16712_0538 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D UPTC16712_1206 PKCI-related HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D UPTC16712_0619 trmI; tRNA m7G46 methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D UPTC16712_0974 truA; tRNA pseudouridine synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D UPTC16712_1056 truB; tRNA pseudouridine 55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D UPTC16712_0403 truD; tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D UPTC16712_1488 iscS; cysteine desulfurase/aminotransferase (IscS/NifS) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UPTC16712_1421 miaA; tRNA(i6A37) synthase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D UPTC16712_0552 mnmE; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, GTPase component K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D UPTC16712_1102 mnmG; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, MnmG component K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D UPTC16712_0359 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D UPTC16712_0164 cysQ; adenosine-3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D UPTC16712_0556 rnpA; ribonuclease P, protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D UPTC16712_0779 rnpB; ribonuclease P, RNA component K01978 rnpB; M1 RNA
D UPTC16712_1000 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D UPTC16712_0607 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D UPTC16712_0732 gltX1; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D UPTC16712_0214 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D UPTC16712_0330 miaB; isopentenyl-adenosine A37 tRNA methylthiolase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D UPTC16712_0687 cmoA; carboxy-S-adenosyl-L-methionine synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D UPTC16712_0572 cmoB; tRNA (cmo5U34)-carboxymethyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D UPTC16712_0968 trmA; tRNA m5U54 methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D UPTC16712_0991 trmD; tRNA m1G37 methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D UPTC16712_0603 rRNA methylase, SpoU family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D UPTC16712_0921 tRNA m6A37 methyltransferase TrmN6 K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D UPTC16712_0246 mnmA; tRNA U34 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D UPTC16712_1500 putative tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D UPTC16712_0210 adenine nucleotide alpha hydrolase, possible tRNA 2-thiocytidine biosynthesis protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D UPTC16712_0629 mnmC; bifunctional 5-methylaminomethyl-2-thiouridine-forming methyltransferase / FAD-dependent demodification enzyme K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D UPTC16712_0670 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D UPTC16712_0743 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D UPTC16712_1415 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D UPTC16712_1416 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D UPTC16712_0011 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D UPTC16712_1393 hypothetical protein (DUF208 domain) K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D UPTC16712_0926 ybbB; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D UPTC16712_0590 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D UPTC16712_0269 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D UPTC16712_0223 tsaB; N6-L-threonylcarbamoyladenine synthase, TsaB subunit K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D UPTC16712_1534 tsaD; N6-L-threonylcarbamoyladenine synthase, TsaD subunit K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D UPTC16712_0770 tsaE; N6-L-threonylcarbamoyladenine synthase, TsaE subunit K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D UPTC16712_1373 dinucleotide-utilizing enzyme, molybdopterin/thiamine biosynthesis family 1 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D UPTC16712_0948 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D UPTC16712_0515 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:clm03012]
D UPTC16712_0226 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D UPTC16712_0034 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D UPTC16712_1095 tsf; translation elongation factor EF-Ts K02357 tsf; elongation factor Ts
D UPTC16712_0443 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D UPTC16712_0457 fusA; translation elongation factor EF-G K02355 fusA; elongation factor G
D UPTC16712_1289 selB; selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor
D UPTC16712_0019 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D UPTC16712_1510 frr; ribosome releasing factor K02838 frr; ribosome recycling factor
D UPTC16712_0575 hemK; protein-(glutamine-N5) methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D UPTC16712_1356 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D UPTC16712_0101 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D UPTC16712_1198 efp; translation elongation factor EF-P K02356 efp; elongation factor P
D UPTC16712_0271 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:clm03110]
D UPTC16712_1062 clpA; ATP-dependent Clp protease, ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D UPTC16712_0726 clpB; ATP-dependent Clp protease, ATP-binding subunit K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D UPTC16712_1390 clpX; ATP-dependent ClpXP protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D UPTC16712_0775 hslU; heat shock protein HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D UPTC16712_0718 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D UPTC16712_0933 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D UPTC16712_1033 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UPTC16712_0596 hypothetical protein (DnaJ domain) K03686 dnaJ; molecular chaperone DnaJ
D UPTC16712_0499 dnaJ; DnaK system heat shock co-chaperone K03686 dnaJ; molecular chaperone DnaJ
D UPTC16712_0796 cbpA; co-chaperone-curved DNA binding protein A K05516 cbpA; curved DNA-binding protein
D UPTC16712_0550 DnaJ-like membrane chaperone protein (N-terminal terB-like domain) K05801 djlA; DnaJ like chaperone protein
D UPTC16712_0935 grpE; DnaK system nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D UPTC16712_1034 groES; 10 kD chaperonin (cpn10) K04078 groES; chaperonin GroES
D UPTC16712_0797 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D UPTC16712_1262 ftsH2; integral membrane ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D UPTC16712_0715 ftsH1; integral membrane ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D UPTC16712_1219 atpB; ATP synthase, F0 complex, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D UPTC16712_1140 copper-binding protein (DUF461 domain) K09796 pccA; periplasmic copper chaperone A
D UPTC16712_0805 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D UPTC16712_0809 hypB; hydrogenase nickel insertion protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D UPTC16712_1083 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D UPTC16712_1188 putative periplasmic folding chaperone K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D UPTC16712_0207 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D UPTC16712_0910 peb4; SurA-like chaperone / peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D UPTC16712_1403 trx; thioredoxin K03671 TXN; thioredoxin
D UPTC16712_1290 putative thioredoxin-like protein, DsbA family K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D UPTC16712_0903 dsbD; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:clm04131]
D UPTC16712_1327 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D UPTC16712_0419 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D UPTC16712_0485 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D UPTC16712_0718 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:clm03051]
D UPTC16712_0718 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:clm03032]
D UPTC16712_1497 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D UPTC16712_0526 putative helicase, PIF1 family (DUF889 domain) K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D UPTC16712_1236 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D UPTC16712_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D UPTC16712_1234 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D UPTC16712_1499 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D UPTC16712_0951 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D UPTC16712_0888 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UPTC16712_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UPTC16712_0949 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UPTC16712_0682 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UPTC16712_1026 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D UPTC16712_0476 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UPTC16712_0094 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D UPTC16712_0684 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D UPTC16712_1146 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D UPTC16712_0003 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D UPTC16712_0167 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:clm03036]
D UPTC16712_1496 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D UPTC16712_1236 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D UPTC16712_0796 cbpA; co-chaperone-curved DNA binding protein A K05516 cbpA; curved DNA-binding protein
D UPTC16712_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D UPTC16712_0260 DNA-binding ferritin-like protein K04047 dps; starvation-inducible DNA-binding protein
D UPTC16712_1189 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D UPTC16712_0620 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D UPTC16712_1067 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D UPTC16712_0839 ftsK; DNA segregation ATPase FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D UPTC16712_0597 ftsW; cell division protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D UPTC16712_0621 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D UPTC16712_1190 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UPTC16712_0628 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UPTC16712_1561 cmeA; multidrug efflux system CmeABC, periplasmic fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D UPTC16712_1389 mrdB; cell wall shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D UPTC16712_1388 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D UPTC16712_0616 rodA; rod shape-determining protein K05837 rodA; rod shape determining protein RodA
D UPTC16712_0192 parA; chromosome partitioning protein K03496 parA; chromosome partitioning protein
D UPTC16712_0193 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UPTC16712_1102 mnmG; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, MnmG component K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D UPTC16712_1131 gidB; 16S rRNA m7G527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D UPTC16712_0753 xerH; integrase/recombinase K04763 xerD; integrase/recombinase XerD
D UPTC16712_0257 mrp; ATP/GTP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D UPTC16712_0667 engB; ribosome biogenesis GTP-binding protein YsxC/EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:clm03400]
D UPTC16712_0972 ogt; O6-alkylguanine-DNA-alkyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D UPTC16712_0132 ung; uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D UPTC16712_0137 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D UPTC16712_0911 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D UPTC16712_0559 uracil-DNA glycosylase family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D UPTC16712_0056 xth; exodeoxyribonuclease III (exonuclease III) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D UPTC16712_0016 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UPTC16712_0684 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D UPTC16712_1341 uvrA; UvrABC nucleotide excision repair complex, subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D UPTC16712_1197 uvrB; UvrABC nucleotide excision repair complex, subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D UPTC16712_0504 uvrC; UvrABC nucleotide excision repair complex, subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D UPTC16712_0800 rep; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UPTC16712_1055 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UPTC16712_0452 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D UPTC16712_0453 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D UPTC16712_0106 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D UPTC16712_0624 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D UPTC16712_1038 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D UPTC16712_1161 mutS2; DNA mismatch binding protein, MutS2 family K07456 mutS2; DNA mismatch repair protein MutS2
D UPTC16712_1343 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D UPTC16712_1165 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D UPTC16712_0888 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UPTC16712_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UPTC16712_0949 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UPTC16712_0682 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UPTC16712_1026 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D UPTC16712_0476 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UPTC16712_0951 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D UPTC16712_0379 addA; exonuclease V, helicase AddA K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D UPTC16712_0159 recA; recombinase K03553 recA; recombination protein RecA
D UPTC16712_0641 ruvA; RuvABC resolvasome, subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D UPTC16712_1276 ruvB; RuvABC resolvasome, subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D UPTC16712_1583 ruvC; RuvABC resolvasome, subunit RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D UPTC16712_1193 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D UPTC16712_1221 radA; DNA repair and recombination protein K04485 radA; DNA repair protein RadA/Sms
D UPTC16712_0701 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D UPTC16712_0502 recR; recombination protein K06187 recR; recombination protein RecR
D UPTC16712_0659 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D UPTC16712_1146 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D UPTC16712_0003 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D UPTC16712_0167 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D UPTC16712_1236 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D UPTC16712_1267 dinP; DNA polymerase IV K03502 umuC; DNA polymerase V
D UPTC16712_0030 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UPTC16712_1513 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:clm03029]
D UPTC16712_1098 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D UPTC16712_0226 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D UPTC16712_0034 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D UPTC16712_1095 tsf; translation elongation factor EF-Ts K02357 tsf; elongation factor Ts
D UPTC16712_0443 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D UPTC16712_0457 fusA; translation elongation factor EF-G K02355 fusA; elongation factor G
D UPTC16712_0776 era; GTP-binding protein K03595 era; GTPase
D UPTC16712_0626 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UPTC16712_1044 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UPTC16712_0657 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D UPTC16712_1089 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UPTC16712_1167 gatA; Glu-tRNA(Gln) amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D UPTC16712_1218 gatB; Glu-tRNA(Gln) amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D UPTC16712_0491 gatC; Glu-tRNA(Gln) amidotransferase, subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D UPTC16712_0932 DNA/RNA endonuclease G K01173 ENDOG; endonuclease G, mitochondrial
D UPTC16712_0526 putative helicase, PIF1 family (DUF889 domain) K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D UPTC16712_0951 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D UPTC16712_0219 beta-barrel assembly machinery complex, BamA/YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D UPTC16712_0933 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D UPTC16712_0935 grpE; DnaK system nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D UPTC16712_1033 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UPTC16712_1034 groES; 10 kD chaperonin (cpn10) K04078 groES; chaperonin GroES
D UPTC16712_0596 hypothetical protein (DnaJ domain) K03686 dnaJ; molecular chaperone DnaJ
D UPTC16712_0499 dnaJ; DnaK system heat shock co-chaperone K03686 dnaJ; molecular chaperone DnaJ
D UPTC16712_1488 iscS; cysteine desulfurase/aminotransferase (IscS/NifS) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UPTC16712_0257 mrp; ATP/GTP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D UPTC16712_0554 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UPTC16712_1142 cytochrome oxidase biogenesis protein, Sco1/SenC/PrrC family K07152 SCO1; protein SCO1
D UPTC16712_0718 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:clm02000]
D UPTC16712_0637 msbA; lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D UPTC16712_1251 pglK; flippase K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D UPTC16712_0914 macB; macrolide-specific efflux protein, ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D UPTC16712_1532 multidrug ABC transporter, membrane protein/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D UPTC16712_0577 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D UPTC16712_1283 modA; molybdenum ABC transporter ModABC, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D UPTC16712_0464 modB; molybdenum ABC transporter ModABC, permease protein K02018 modB; molybdate transport system permease protein
D UPTC16712_1285 modC; molybdenum ABC transporter ModABC, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D UPTC16712_1529 putative iron(III) ABC transporter, periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D UPTC16712_1528 putative iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D UPTC16712_1527 putative iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D UPTC16712_0127 lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D UPTC16712_0125 lipid asymmetry ABC transporter MlaABCDEF, permease component MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D UPTC16712_0126 lipid asymmetry ABC transporter MlaABCDEF, ATPase component MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D UPTC16712_0128 putative lipid asymmetry ABC transporter MlaABCDEF component MlaB K18480 linN; cholesterol transport system auxiliary component
D UPTC16712_1281 lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D UPTC16712_0819 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D UPTC16712_0818 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D UPTC16712_0817 pstA; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D UPTC16712_0816 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D UPTC16712_0598 cjaC; amino acid ABC transporter, periplasmic arginine/lysine/histidine-binding lipoprotein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D UPTC16712_0605 amino acid ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D UPTC16712_0604 amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D UPTC16712_1113 livJ; high-affinity branched-chain amino acid transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D UPTC16712_1114 livK; high-affinity branched-chain amino acid transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D UPTC16712_1115 livH; high-affinity branched-chain amino acid transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D UPTC16712_1116 livM; high-affinity branched-chain amino acid transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D UPTC16712_1117 livG; high-affinity branched-chain amino acid transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D UPTC16712_1118 livF; high-affinity branched-chain amino acid transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D UPTC16712_0649 metQ; DL-methionine ABC transporter MetINQ, substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D UPTC16712_0651 metI; DL-methionine ABC transporter MetINQ, permease protein K02072 metI; D-methionine transport system permease protein
D UPTC16712_0652 metN; DL-methionine ABC transporter MetINQ, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D UPTC16712_0900 amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D UPTC16712_0706 cjaA; amino acid ABC transporter, periplasmic cysteine-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D UPTC16712_0901 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D UPTC16712_0703 papP; pathogenesis-associated glutamine ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D UPTC16712_0704 hypothetical protein, ABC transporter, His/Glu/Gln/Arg/opine family (permease protein) K02029 ABC.PA.P; polar amino acid transport system permease protein
D UPTC16712_0705 papQ; pathogenesis-associated glutamine ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D UPTC16712_1441 nikZ; nickel ABC transporter, periplasmic nickel-binding protein K25103 nikZ; nickel transport system substrate-binding protein
D UPTC16712_1440 nikY; nickel ABC transporter, permease protein K25104 nikY; nickel transport system permease protein
D UPTC16712_1439 nikX; nickel ABC transporter, permease protein K25105 nikX; nickel transport system permease protein
D UPTC16712_1438 nikW; nickel ABC transporter, ATP-binding protein K25106 nikW; nickel transport system ATP-binding protein [EC:7.2.2.11]
D UPTC16712_1437 nikV; nickel ABC transporter, ATP-binding protein K25107 nikV; nickel transport system ATP-binding protein [EC:7.2.2.11]
D UPTC16712_0048 znuA; zinc ABC transporter ZnuABC, periplasmic zinc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D UPTC16712_0046 znuB; zinc ABC transporter ZnuABC, membrane protein K09816 znuB; zinc transport system permease protein
D UPTC16712_0047 znuC; zinc ABC transporter ZnuABC, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D UPTC16712_0300 kpsM; capsular polysaccharide export system, inner membrane protein K09688 kpsM; capsular polysaccharide transport system permease protein
D UPTC16712_0302 kpsE; capsular polysaccharide export system, inner membrane protein K10107 kpsE; capsular polysaccharide transport system permease protein
D UPTC16712_0301 kpsT; capsular polysaccharide export system, ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D UPTC16712_0975 putative lipooligosaccharide transport system, permease component (LptF family) K07091 lptF; lipopolysaccharide export system permease protein
D UPTC16712_1355 putative lipooligosaccharide transport system, permease component (LptG family) K11720 lptG; lipopolysaccharide export system permease protein
D UPTC16712_0769 putative lipooligosaccharide transport system, ATP-binding component (LptB family) K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D UPTC16712_0621 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D UPTC16712_0620 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D UPTC16712_1143 lolC; lipoprotein releasing system, transmembrane protein, LolC/E family K02004 ABC.CD.P; putative ABC transport system permease protein
D UPTC16712_1176 ferrirhodotorulic acid ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D UPTC16712_1177 ferrirhodotorulic acid ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D UPTC16712_1094 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D UPTC16712_1175 ferrirhodotorulic acid ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D UPTC16712_1149 DASS family sodium/dicarboxylate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D UPTC16712_1123 MatE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D UPTC16712_1335 metabolite/H+ symporter, major facilitator superfamily K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D UPTC16712_1010 putative cyanate transporter CynX K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D UPTC16712_0117 drug resistance transporter, Bcr/CflA family K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D UPTC16712_0919 major facilitator superfamily transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D UPTC16712_1029 putative potassium channel protein (TrkA domain) K10716 kch; voltage-gated potassium channel
D UPTC16712_1508 BAX inhibitor (BI)-1 like protein (UPF0005 domain) K19416 yccA; modulator of FtsH protease
D UPTC16712_1506 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein
D UPTC16712_1232 Mg/Co/Ni transporter, MgtE family K06213 mgtE; magnesium transporter
D UPTC16712_1333 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D UPTC16712_1332 motB; flagellar motor protein K02557 motB; chemotaxis protein MotB
D UPTC16712_0907 hypothetical protein (OmpA/MotB domain) K02557 motB; chemotaxis protein MotB
D UPTC16712_0474 exbB; TonB system transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D UPTC16712_0473 exbD; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D UPTC16712_0202 tolR; Tol-Pal system subunit TolR K03559 exbD; biopolymer transport protein ExbD
D UPTC16712_0591 putative CorA-like Mg2+ transporter protein K16074 zntB; zinc transporter
D UPTC16712_0719 crcB; putative fluoride ion transporter K06199 crcB; fluoride exporter
D UPTC16712_0459 hypothetical membrane protein (DUF21 domain), possible TlyC family hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D UPTC16712_0383 cadF; outer membrane fibronectin-binding protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D UPTC16712_0475 cfrA; ferric enterobactin uptake receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D UPTC16712_1563 cmeC; multidrug efflux system CmeABC, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
D UPTC16712_0219 beta-barrel assembly machinery complex, BamA/YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D UPTC16712_0959 beta-barrel assembly machinery complex, BamD/YfiO lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D UPTC16712_0666 putative lipooligosaccharide transport system, periplasmic component (LptA family) K09774 lptA; lipopolysaccharide export system protein LptA
D UPTC16712_0513 putative lipooligosaccharide transport system, OM component (LptD family) K04744 lptD; LPS-assembly protein
D UPTC16712_0891 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF
D UPTC16712_1562 cmeB; multidrug efflux system CmeABC, inner membrane drug transporter CmeB K18138 acrB; multidrug efflux pump
D UPTC16712_1286 multidrug efflux system protein, EmrE family K03297 emrE; small multidrug resistance pump
D UPTC16712_1382 multidrug efflux system protein, EmrE family K18924 ykkC; paired small multidrug resistance pump
D UPTC16712_1381 multidrug efflux system protein, EmrE family K18925 ykkD; paired small multidrug resistance pump
D UPTC16712_1543 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter
D UPTC16712_0285 anaerobic C4-dicarboxylate transporter, DcuA/DcuB family K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D UPTC16712_0147 anaerobic C4-dicarboxylate transporter, DcuA/DcuB family K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D UPTC16712_0567 dcuB; anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D UPTC16712_1442 BCCT (betaine/carnitine/choline) family transporter K02168 betT; choline/glycine/proline betaine transport protein
D UPTC16712_0361 putP; sodium/proline symporter K11928 putP; sodium/proline symporter
D UPTC16712_0461 Na+/proline symporter K11928 putP; sodium/proline symporter
D UPTC16712_1181 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D UPTC16712_1051 sstT; sodium ion-motive force-driven serine/threonine transporter K07862 sstT; serine/threonine transporter
D UPTC16712_0912 gltS; sodium/glutamate symport carrier protein K03312 gltS; glutamate:Na+ symporter, ESS family
D UPTC16712_1490 nhaA1; Na+/H+ antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D UPTC16712_1491 nhaA2; Na+/H+ antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D UPTC16712_0794 kefB; glutathione-regulated potassium-efflux system protein KefB K03455 KEA1_2_3; K+:H+ antiporter
D UPTC16712_0146 ktrB; potassium transporter KtrAB, KtrB subunit K03498 trkH; trk/ktr system potassium uptake protein
D UPTC16712_0145 ktrA; potassium transporter KtrAB, KtrA subunit K03499 trkA; trk/ktr system potassium uptake protein
D UPTC16712_0542 xanthine/uracil permease K16345 xanP; xanthine permease XanP
D UPTC16712_0430 xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D UPTC16712_0096 sdaC; L-serine transporter K03837 sdaC; serine transporter
D UPTC16712_0676 acr3; arsenic resistance membrane transporter K03325 ACR3; arsenite transporter
D UPTC16712_0288 anaerobic C4-dicarboxylate transporter, DcuC family K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D UPTC16712_1370 putative anaerobic C4-dicarboxylate transporter, DcuC family K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D UPTC16712_0639 murJ; lipid II flippase K03980 murJ; putative peptidoglycan lipid II flippase
D UPTC16712_0983 putative membrane protein, predicted permease K24180 mleP; malate permease and related proteins
D UPTC16712_1157 transporter, LysE family K06895 lysE; L-lysine exporter family protein LysE/ArgO
D UPTC16712_1557 transporter, LysE family K05835 rhtC; threonine efflux protein
D UPTC16712_0953 putative membrane protein, MarC family K05595 marC; multiple antibiotic resistance protein
D UPTC16712_0597 ftsW; cell division protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D UPTC16712_0057 hypothetical membrane protein (DUF204 domain) K23242 mntP; manganese efflux pump family protein
D UPTC16712_1180 ferrirhodotorulic acid ABC transporter, inner membrane protein K07243 FTR; high-affinity iron transporter
D UPTC16712_1179 p19; ferrirhodotorulic acid ABC transporter, periplasmic binding protein K07230 p19; periplasmic iron binding protein
D UPTC16712_0203 tolA; Tol-Pal system subunit TolA K03832 tonB; periplasmic protein TonB
D UPTC16712_0472 energy transduction protein TonB K03832 tonB; periplasmic protein TonB
D UPTC16712_0205 pal; Tol-Pal system peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D UPTC16712_0204 tolB; Tol-Pal system translocation protein TolB K03641 tolB; TolB protein
D UPTC16712_0432 molybdopterin-containing oxidoreductase I, DMSO/TMAO/BSO reductase family, catalytic subunit K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D UPTC16712_1561 cmeA; multidrug efflux system CmeABC, periplasmic fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D UPTC16712_0915 macA; macrolide-specific efflux protein, membrane fusion protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D UPTC16712_0293 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D UPTC16712_0460 long-chain fatty acid ABC transporter, fused permease and ATPase components, SbmA family K17938 sbmA; peptide/bleomycin uptake transporter
C 02044 Secretion system [BR:clm02044]
D UPTC16712_0387 ctsD; transformation system, type II secretion system secretin protein CtsD K02453 gspD; general secretion pathway protein D
D UPTC16712_0389 ctsE; transformation system, type II secretion system ATPase CtsE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D UPTC16712_0390 ctsF; transformation system, type II secretion system membrane protein CtsF K02455 gspF; general secretion pathway protein F
D UPTC16712_1194 putative type II secretion system protein K02456 gspG; general secretion pathway protein G
D UPTC16712_1533 ctsG; transformation system, putative pseudopilin protein CtsG K02456 gspG; general secretion pathway protein G
D UPTC16712_0976 peptidase A24 N-terminal domain protein, putative prepilin signal peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D UPTC16712_0733 putative membrane protein, YGGT family K02221 yggT; YggT family protein
D UPTC16712_1227 competence protein, ComEC family K02238 comEC; competence protein ComEC
D UPTC16712_1147 ctsW; transformation system, predicted amidophosphoribosyltransferase CtsW K02242 comFC; competence protein ComFC
D UPTC16712_0940 flhA; flagellar export apparatus, flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D UPTC16712_1322 flhB; flagellar export apparatus, flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D UPTC16712_0580 flhB2; FlhB C-terminus-related protein K04061 flhB2; flagellar biosynthesis protein
D UPTC16712_1350 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D UPTC16712_1348 fliH; flagellar export apparatus, flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D UPTC16712_1484 fliI; flagellar export apparatus, flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D UPTC16712_0244 fliY; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D UPTC16712_0178 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D UPTC16712_0982 fliP; flagellar export apparatus, flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D UPTC16712_0161 fliQ; flagellar export apparatus, flagellar basal body protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D UPTC16712_1093 fliR; flagellar export apparatus, flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D UPTC16712_1290 putative thioredoxin-like protein, DsbA family K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D UPTC16712_0853 tssM; type VI secretion system, membrane platform protein K11891 impL; type VI secretion system protein ImpL
D UPTC16712_0875 tssL; type VI secretion system, membrane platform protein K11892 impK; type VI secretion system protein ImpK
D UPTC16712_0876 tssK; type VI secretion system, membrane platform protein K11893 impJ; type VI secretion system protein ImpJ
D UPTC16712_0883 tssG; type VI secretion system protein K11895 impH; type VI secretion system protein ImpH
D UPTC16712_0882 tssF; type VI secretion system protein K11896 impG; type VI secretion system protein ImpG
D UPTC16712_0880 tssC; type VI secretion system, tubular sheath protein K11900 impC; type VI secretion system protein ImpC
D UPTC16712_0879 tssB; type VI secretion system, tubular sheath protein K11901 impB; type VI secretion system protein ImpB
D UPTC16712_0854 tssD; type VI secretion system, secreted hemolysin co-regulated protein (Hcp) K11903 hcp; type VI secretion system secreted protein Hcp
D UPTC16712_0855 tssI1; type VI secretion system, secreted protein K11904 vgrG; type VI secretion system secreted protein VgrG
D UPTC16712_0869 tssI2; type VI secretion system, secreted protein K11904 vgrG; type VI secretion system secreted protein VgrG
D UPTC16712_0881 tssE; type VI secretion system, baseplate protein K11905 K11905; type VI secretion system protein
D UPTC16712_0877 tssJ; type VI secretion system, membrane platform protein K11906 vasD; type VI secretion system protein VasD
D UPTC16712_0878 tssA; type VI secretion system protein K11910 vasJ; type VI secretion system protein VasJ
D UPTC16712_0852 tagH; type VI secretion system protein K11894 impI; type VI secretion system protein ImpI
D UPTC16712_0529 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D UPTC16712_1047 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D UPTC16712_0446 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE
D UPTC16712_1046 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D UPTC16712_1509 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG
D UPTC16712_0089 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY
D UPTC16712_0995 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D UPTC16712_1222 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D UPTC16712_1048 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D UPTC16712_0554 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UPTC16712_1090 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D UPTC16712_0672 twin arginine translocation system, TatB family protein K03117 tatB; sec-independent protein translocase protein TatB
D UPTC16712_0671 tatC; twin arginine translocation system, TatC protein K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:clm02042]
D UPTC16712_1368 cdtA; cytolethal distending toxin, subunit CdtA K11013 cdtA; cytolethal distending toxin subunit A
D UPTC16712_1367 cdtB; cytolethal distending toxin, subunit CdtB K11014 cdtB; cytolethal distending toxin subunit B
D UPTC16712_1366 cdtC; cytolethal distending toxin, subunit CdtC K11015 cdtC; cytolethal distending toxin subunit C
D UPTC16712_0459 hypothetical membrane protein (DUF21 domain), possible TlyC family hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:clm02022]
D UPTC16712_0134 two-component system response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D UPTC16712_0799 cprS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D UPTC16712_1106 dccS; two-component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D UPTC16712_0133 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D UPTC16712_0501 racS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D UPTC16712_0182 cosR; two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D UPTC16712_0500 racR; two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D UPTC16712_0798 cprR; two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D UPTC16712_0601 flgS; two-component system, sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D UPTC16712_0530 flgR; sigma54-dependent response regulator K02481 flgR; two-component system, NtrC family, response regulator
D UPTC16712_1361 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D UPTC16712_1260 cheY; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D UPTC16712_0696 cheB'; MCP protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D UPTC16712_1362 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
C 02035 Bacterial motility proteins [BR:clm02035]
D UPTC16712_1361 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D UPTC16712_1360 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D UPTC16712_0697 cheR; MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D UPTC16712_0696 cheB'; MCP protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D UPTC16712_1260 cheY; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D UPTC16712_1362 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D UPTC16712_0436 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1129 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_0548 MCP-domain signal transduction protein (DUF3365 domain) K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_0099 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_0149 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1215 PAS sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1323 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1324 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1549 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D UPTC16712_1348 fliH; flagellar export apparatus, flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D UPTC16712_1484 fliI; flagellar export apparatus, flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D UPTC16712_0982 fliP; flagellar export apparatus, flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D UPTC16712_0161 fliQ; flagellar export apparatus, flagellar basal body protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D UPTC16712_1093 fliR; flagellar export apparatus, flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D UPTC16712_0940 flhA; flagellar export apparatus, flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D UPTC16712_1322 flhB; flagellar export apparatus, flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D UPTC16712_1349 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D UPTC16712_0243 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D UPTC16712_0244 fliY; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D UPTC16712_0178 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D UPTC16712_1350 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D UPTC16712_0397 flgI; flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D UPTC16712_0759 flgA; flagellar basal body P-ring biosynthesis protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D UPTC16712_0646 flgH; flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D UPTC16712_0280 fliL; flagellar basal body-associated protein K02415 fliL; flagellar protein FliL
D UPTC16712_1066 fliE; flagellar proximal rod protein K02408 fliE; flagellar hook-basal body complex protein FliE
D UPTC16712_1522 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D UPTC16712_1064 flgB; flagellar proximal rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D UPTC16712_1065 flgC; flagellar proximal rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D UPTC16712_1523 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D UPTC16712_1019 flgG2; flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D UPTC16712_1018 flgG; flagellar basal body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D UPTC16712_0396 hypothetical protein, possible flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D UPTC16712_0115 flgE2; flagellar hook protein, epsilonproteobacterial variant K02390 flgE; flagellar hook protein FlgE
D UPTC16712_1524 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D UPTC16712_0393 flgK; flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D UPTC16712_0840 flgL; flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D UPTC16712_1145 flgP; LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP
D UPTC16712_1144 flgQ; flagellar-associated protein FlgQ K24346 flgQ; flagellar motility protein FlgQ
D UPTC16712_0573 flaC; flagellar secreted protein K02406 fliC; flagellin
D UPTC16712_0168 flaA; flagellin K02406 fliC; flagellin
D UPTC16712_0169 flaB; flagellin K02406 fliC; flagellin
D UPTC16712_0782 fliD; flagellar filament cap protein K02407 fliD; flagellar hook-associated protein 2
D UPTC16712_0781 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D UPTC16712_0242 fliA; RNA polymerase sigma28 factor K02405 fliA; RNA polymerase sigma factor FliA
D UPTC16712_1333 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D UPTC16712_1332 motB; flagellar motor protein K02557 motB; chemotaxis protein MotB
D UPTC16712_0907 hypothetical protein (OmpA/MotB domain) K02557 motB; chemotaxis protein MotB
D UPTC16712_0958 fliW; flagellar assembly protein K13626 fliW; flagellar assembly factor FliW
D UPTC16712_0783 flaG; flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D UPTC16712_0239 flhF; flagellar biosynthesis (GTP-binding) protein K02404 flhF; flagellar biosynthesis protein FlhF
D UPTC16712_0240 flhG; flagellar biosynthesis protein K04562 flhG; flagellar biosynthesis protein FlhG
D UPTC16712_0976 peptidase A24 N-terminal domain protein, putative prepilin signal peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:clm04812]
D UPTC16712_1389 mrdB; cell wall shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D UPTC16712_1190 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UPTC16712_1189 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D UPTC16712_0192 parA; chromosome partitioning protein K03496 parA; chromosome partitioning protein
D UPTC16712_0193 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:clm04147]
D UPTC16712_0718 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D UPTC16712_0158 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UPTC16712_0419 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D UPTC16712_0418 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D UPTC16712_0485 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D UPTC16712_1325 ahpC; alkyl hydroperoxide reductase protein, peroxidase component K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D UPTC16712_1033 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UPTC16712_0933 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D UPTC16712_0261 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D UPTC16712_1166 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D UPTC16712_0443 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D UPTC16712_1206 PKCI-related HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D UPTC16712_0656 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D UPTC16712_0693 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D UPTC16712_0284 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D UPTC16712_0772 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D UPTC16712_0737 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D UPTC16712_1005 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UPTC16712_1133 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D UPTC16712_1199 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D UPTC16712_0549 purH; AICAR transformylase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D UPTC16712_0417 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D UPTC16712_0344 lipocalin domain protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:clm02048]
D UPTC16712_1580 hsdR2; type I restriction/modification system, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D UPTC16712_1579 hsdS2; type I restriction/modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D UPTC16712_1577 hsdM2; type I restriction/modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D UPTC16712_1160 hsdM1; type I restriction/modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D UPTC16712_1444 putative type II restriction enzyme K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D UPTC16712_0035 adenine-specific DNA methyltransferase (EcoRI methylase) K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D UPTC16712_0409 DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D UPTC16712_1110 hypothetical protein, putative transcriptional regulator K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D UPTC16712_1190 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UPTC16712_1389 mrdB; cell wall shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D UPTC16712_1295 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D UPTC16712_1488 iscS; cysteine desulfurase/aminotransferase (IscS/NifS) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:clm01504]
D UPTC16712_1375 class D beta-lactamase K22333 blaOXA-493; beta-lactamase class D OXA-493 [EC:3.5.2.6]
D UPTC16712_1308 aminoglycoside N3'-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D UPTC16712_0899 acetyltransferase K18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D UPTC16712_1561 cmeA; multidrug efflux system CmeABC, periplasmic fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D UPTC16712_1562 cmeB; multidrug efflux system CmeABC, inner membrane drug transporter CmeB K18138 acrB; multidrug efflux pump
D UPTC16712_1563 cmeC; multidrug efflux system CmeABC, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:clm03100]
D UPTC16712_0466 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UPTC16712_1450 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UPTC16712_0522 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UPTC16712_0068 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UPTC16712_1470 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UPTC16712_1469 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UPTC16712_0592 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UPTC16712_0602 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UPTC16712_0535 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D UPTC16712_0518 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D UPTC16712_1546 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D UPTC16712_0611 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UPTC16712_0058 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UPTC16712_1492 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UPTC16712_0520 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UPTC16712_0441 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UPTC16712_0758 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UPTC16712_1548 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UPTC16712_1471 tRNA-His K14226 tRNA-His; tRNA His
D UPTC16712_0467 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UPTC16712_1449 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UPTC16712_0523 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UPTC16712_1213 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UPTC16712_0841 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UPTC16712_1547 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UPTC16712_1468 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UPTC16712_0516 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UPTC16712_0519 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UPTC16712_0612 tRNA-Met K14230 tRNA-Met; tRNA Met
D UPTC16712_0615 tRNA-Met K14230 tRNA-Met; tRNA Met
D UPTC16712_0144 tRNA-Met K14230 tRNA-Met; tRNA Met
D UPTC16712_0298 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D UPTC16712_1472 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D UPTC16712_1545 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UPTC16712_0142 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UPTC16712_1266 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UPTC16712_0439 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UPTC16712_0442 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UPTC16712_0445 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D UPTC16712_0440 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D UPTC16712_0517 tRNA-Val K14237 tRNA-Val; tRNA Val
D UPTC16712_1571 tRNA-Val K14237 tRNA-Val; tRNA Val
D UPTC16712_0364 selC; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D UPTC16712_0465 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UPTC16712_1451 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UPTC16712_0521 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UPTC16712_0468 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UPTC16712_0524 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UPTC16712_1448 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UPTC16712_0469 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UPTC16712_0525 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UPTC16712_1447 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UPTC16712_1585 srpB; bacterial signal recognition particle RNA (4.5S RNA) K01983 ffs; SRP RNA
D UPTC16712_0779 rnpB; ribonuclease P, RNA component K01978 rnpB; M1 RNA
D UPTC16712_1273 ssrA; 10Sa RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D UPTC16712_0463 saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D UPTC16712_0342 flavodoxin-like fold domain protein, putative NAD(P)H (quinone) dehydrogenase/reductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D UPTC16712_0095 old yellow enzyme (OYE)-related FMN binding domain-containing protein K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D UPTC16712_0804 msrA; S-isomer-specific methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D UPTC16712_1075 yedY; periplasmic DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D UPTC16712_0185 ccpA; periplasmic diheme cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D UPTC16712_0100 cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D UPTC16712_0644 alpha/beta hydrolase family protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D UPTC16712_1394 bcp; thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D UPTC16712_0801 tpx1; lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D UPTC16712_1233 tpx2; lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D UPTC16712_0728 hydB; [NiFe] hydrogenase, large subunit K05922 hydB; quinone-reactive Ni/Fe-hydrogenase large subunit [EC:1.12.5.1]
D UPTC16712_0416 [NiFe] hydrogenase, small subunit K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1]
D UPTC16712_0727 hydA; [NiFe] hydrogenase, small subunit K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1]
D UPTC16712_0822 cft; ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D UPTC16712_0675 arsC; arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D UPTC16712_0060 nrdG; anaerobic ribonucleoside triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D UPTC16712_1516 pcm; L-isoaspartate protein carboxylmethyltransferase, type II K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D UPTC16712_1565 hemN3; oxygen-independent coproporphyrinogen III oxidase K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350]
D UPTC16712_1049 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D UPTC16712_1517 putative acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D UPTC16712_1374 hypothetical protein, putative acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D UPTC16712_1063 aat; leucyl, phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D UPTC16712_0595 ate; arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D UPTC16712_1254 pglB; undecaprenyl-diphosphooligosaccharide--protein glycotransferase K17251 pglB; undecaprenyl-diphosphooligosaccharide---protein glycotransferase [EC:2.4.99.19]
D UPTC16712_0336 lgt; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D UPTC16712_1256 pglC; N,N'-diacetylbacilliosaminyl-1-phosphate transferase K15915 pglC; undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase [EC:2.7.8.36]
D UPTC16712_0566 astA; arylsulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D UPTC16712_0561 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D UPTC16712_0750 sixA; phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D UPTC16712_0661 tatD; ssDNA/RNA exonuclease, 3' - 5' specific K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D UPTC16712_0569 endonuclease, thermonuclease family K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D UPTC16712_1479 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D UPTC16712_0287 cfiP; reactive intermediate/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D UPTC16712_1475 carbohydrate kinase, YjeF-related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D UPTC16712_0045 lig; DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D UPTC16712_1079 copA; copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D UPTC16712_1489 iscU; iron-sulfur cluster assembly scaffold protein IscU K13819 K13819; NifU-like protein
D UPTC16712_1012 napD; periplasmic nitrate reductase assembly protein K02570 napD; periplasmic nitrate reductase NapD
D UPTC16712_0406 fldA; flavodoxin K03839 fldA; flavodoxin I
D UPTC16712_1016 napG; menaquinol dehydrogenase NapGH, periplasmic component NapG K02573 napG; ferredoxin-type protein NapG
D UPTC16712_1015 napH; menaquinol dehydrogenase NapGH, membrane component NapH K02574 napH; ferredoxin-type protein NapH
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D UPTC16712_0767 type III pyridoxal 5-phosphate (PLP)-dependent enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D UPTC16712_0736 mobB; molybdenum cofactor guanylyltransferase protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
C 99975 Protein processing
D UPTC16712_0547 putative heat shock protein HslJ K03668 hslJ; heat shock protein HslJ
D UPTC16712_1061 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D UPTC16712_1482 tig; trigger factor (peptidyl-prolyl cis/trans isomerase, chaperone) K03545 tig; trigger factor
D UPTC16712_1076 yedZ; periplasmic DMSO/TMAO reductase YedYZ, heme-binding membrane subunit K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D UPTC16712_0007 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D UPTC16712_0008 ureF; urease accessory protein UreF K03188 ureF; urease accessory protein
D UPTC16712_0009 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D UPTC16712_0010 ureH; urease accessory protein UreH K03190 ureD; urease accessory protein
D UPTC16712_1059 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D UPTC16712_0808 hypC; hydrogenase assembly chaperone HypC K04653 hypC; hydrogenase expression/formation protein HypC
D UPTC16712_0807 hypD; hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D UPTC16712_0806 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D UPTC16712_0810 hypF; [NiFe] hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D UPTC16712_1478 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
D UPTC16712_1584 selT/selW/selH selenoprotein K07401 K07401; selenoprotein W-related protein
C 99976 Replication and repair
D UPTC16712_1476 rmuC; DNA recombination protein K09760 rmuC; DNA recombination protein RmuC
D UPTC16712_1037 magIII; 3-methyladenine DNA glycosylase K07457 K07457; endonuclease III related protein
D UPTC16712_1404 hypothetical protein (UPF0102 domain) K07460 yraN; putative endonuclease
D UPTC16712_0945 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D UPTC16712_1570 rarA; recombination factor protein RarA K07478 ycaJ; putative ATPase
D UPTC16712_1249 wlaX; putative polysaccharide biosynthesis protein K07501 K07501; 3'-5' exonuclease
C 99979 Viral proteins
C 99998 Others
D UPTC16712_0121 YbaB/EbfC DNA-binding family protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D UPTC16712_0927 inorganic phosphate transporter, PitA family K03306 TC.PIT; inorganic phosphate transporter, PiT family
D UPTC16712_0905 Na+-dependent transporter, SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D UPTC16712_1209 Na+-dependent transporter, SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D UPTC16712_1210 Na+-dependent transporter, SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D UPTC16712_1211 Na+-dependent transporter, SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D UPTC16712_0606 Na+/alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D UPTC16712_0553 putative RNA-binding protein (Jag domain) K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
D UPTC16712_0140 hypothetical lipoprotein (DUF3897 domain) K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D UPTC16712_1520 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D UPTC16712_1553 putative nucleotide-binding protein (DUF520 domain) K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D UPTC16712_0528 lolA; outer membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D UPTC16712_1282 lipid asymmetry ABC transporter MlaABCDEF, lipoprotein MlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA
D UPTC16712_0323 kpsS; capsular polysaccharide export protein K07265 kpsS; capsular polysaccharide export protein
D UPTC16712_0322 kpsC; capsular polysaccharide export protein (two domain) K07266 kpsC; capsular polysaccharide export protein
C 99994 Others
D UPTC16712_1108 hemerythrin-like metal-binding domain protein K07216 hr; hemerythrin
D UPTC16712_1109 hemerythrin-like metal-binding domain protein K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D UPTC16712_0492 putative membrane protein, CvpA family K03558 cvpA; membrane protein required for colicin V production
D UPTC16712_0066 putative FlgJ-related protein (Bax domain) K03796 bax; Bax protein
D UPTC16712_0155 ctb; group III truncated hemoglobin K06886 glbN; hemoglobin
D UPTC16712_1228 virulence factor, BrkB family protein K07058 K07058; membrane protein
D UPTC16712_0514 hypothetical protein, putative phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D UPTC16712_1531 hypothetical protein (DUF336 domain) K11477 glcG; glc operon protein GlcG
D UPTC16712_0497 hypothetical protein (sporulation domain) K03749 dedD; DedD protein
D UPTC16712_0013 PhnA domain-containing protein K06193 phnA; protein PhnA
C 99997 Function unknown
D UPTC16712_0283 ankyrin domain protein K06867 K06867; uncharacterized protein
D UPTC16712_0971 ankyrin domain protein K06867 K06867; uncharacterized protein
D UPTC16712_0618 fibronectin type III domain-containing protein K06882 K06882; uncharacterized protein
D UPTC16712_0600 hypothetical protein (DUF234 domain) K06921 K06921; uncharacterized protein
D UPTC16712_0965 CoA-binding domain protein K06929 K06929; uncharacterized protein
D UPTC16712_0922 hypothetical protein, predicted Fe-S cluster-containing protein K06940 K06940; uncharacterized protein
D UPTC16712_0993 putative RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein
D UPTC16712_0918 putative acyl esterase K06978 K06978; uncharacterized protein
D UPTC16712_1280 RND superfamily exporter K07003 K07003; uncharacterized protein
D UPTC16712_0673 arsP; arsenic resistance permease K07089 K07089; uncharacterized protein
D UPTC16712_1321 hypothetical protein, sulfite exporter TauE/SafE family K07090 K07090; uncharacterized protein
D UPTC16712_0391 putative membrane protein, TauE/SafE family permease K07090 K07090; uncharacterized protein
D UPTC16712_0939 DHH-type phosphohydrolase K07097 K07097; uncharacterized protein
D UPTC16712_0578 metallophosphatase K07098 K07098; uncharacterized protein
D UPTC16712_0363 fdhT; formate dehydrogenase biogenesis protein FdhT K07112 K07112; uncharacterized protein
D UPTC16712_0067 ATPase, AAA family (DUF4143 domain) K07133 K07133; uncharacterized protein
D UPTC16712_0998 zinc ribbon domain protein (DUF164 domain) K07164 K07164; uncharacterized protein
D UPTC16712_0555 membrane protein insertion efficiency factor, YidD family K08998 K08998; uncharacterized protein
D UPTC16712_0931 hypothetical protein, GatB/YqeY family K09117 K09117; uncharacterized protein
D UPTC16712_0370 putative membrane protein (DsbD domain) K09792 K09792; uncharacterized protein
D UPTC16712_1030 hypothetical protein (DUF465 domain) K09794 K09794; uncharacterized protein
D UPTC16712_0946 divergent polysaccharide deacetylase K09798 K09798; uncharacterized protein
D UPTC16712_0368 hypothetical protein (DUF507 domain) K09804 K09804; uncharacterized protein
D UPTC16712_0141 hypothetical protein K09859 K09859; uncharacterized protein
D UPTC16712_0438 hypothetical protein (DUF328 domain) K09861 K09861; uncharacterized protein
D UPTC16712_1084 putative membrane protein K09943 K09943; uncharacterized protein
D UPTC16712_0711 hypothetical protein (putative TrkA domain) K09944 K09944; uncharacterized protein
D UPTC16712_0412 hypothetical protein, pyridoxine 5'-phosphate oxidase family K09979 K09979; uncharacterized protein
D UPTC16712_0131 hypothetical protein, putative transcriptional regulator (zinc finger domain) K09981 K09981; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 10, 2024