+D GENES KO #

  KEGG Orthology (KO) - Cronobacter muytjensii

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cmw00010] D AFK63_04180 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AFK63_00700 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AFK63_19070 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AFK63_10100 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D AFK63_01475 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AFK63_17880 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D AFK63_05265 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AFK63_02235 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AFK63_17900 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AFK63_14210 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AFK63_10260 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AFK63_02230 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AFK63_12415 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AFK63_15400 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AFK63_19015 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D AFK63_02735 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AFK63_09900 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AFK63_06675 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AFK63_09970 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AFK63_14870 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AFK63_14865 aceF; pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AFK63_14860 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AFK63_08185 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D AFK63_08665 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D AFK63_08320 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AFK63_07430 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D AFK63_08175 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AFK63_17845 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D AFK63_15880 alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D AFK63_08945 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AFK63_19120 zinc-binding dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AFK63_08170 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D AFK63_00935 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AFK63_12410 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D AFK63_18760 alpha-D-glucose-1-phosphatase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10] D AFK63_12665 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AFK63_10265 glucose-6-phosphate 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D AFK63_00075 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D AFK63_09995 diacetylchitobiose-6-phosphate hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D AFK63_12225 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D AFK63_12230 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D AFK63_09620 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D AFK63_02320 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D AFK63_15695 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D AFK63_02495 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D AFK63_04060 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D AFK63_10880 PTS glucose-specific subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D AFK63_12240 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_02745 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_03590 PTS glucose transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_09410 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_13140 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D AFK63_15700 PTS cellobiose transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:cmw00020] D AFK63_12565 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D AFK63_07600 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AFK63_14855 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AFK63_10710 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AFK63_12540 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D AFK63_12535 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AFK63_14860 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AFK63_12525 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AFK63_12530 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AFK63_12550 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AFK63_12545 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AFK63_12560 sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AFK63_12555 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AFK63_01110 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AFK63_01105 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AFK63_01100 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C D AFK63_01095 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D D AFK63_09390 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AFK63_09385 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AFK63_16635 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AFK63_17565 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D AFK63_00075 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D AFK63_14870 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AFK63_14865 aceF; pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AFK63_08185 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:cmw00030] D AFK63_00700 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AFK63_06685 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AFK63_12360 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D AFK63_05515 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D AFK63_00160 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AFK63_04275 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_04280 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_03870 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_05960 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_05965 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_02215 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_03875 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D AFK63_15330 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D AFK63_02260 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D AFK63_15520 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D AFK63_18610 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D AFK63_15510 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D AFK63_12665 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AFK63_00280 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AFK63_07205 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AFK63_06690 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D AFK63_06695 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D AFK63_14790 glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D AFK63_19370 bifunctional glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D AFK63_19855 gntK; gluconate kinase K00851 idnK; gluconokinase [EC:2.7.1.12] D AFK63_19380 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D AFK63_19535 ketodeoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D AFK63_05265 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AFK63_02235 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AFK63_01475 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AFK63_17880 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D AFK63_19070 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AFK63_10100 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:cmw00040] D AFK63_12355 acyl-CoA thioesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D AFK63_09135 acyl-CoA thioesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D AFK63_02420 oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6] D AFK63_02435 oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6] D AFK63_02465 cupin K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D AFK63_00995 5-keto-4-deoxyuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D AFK63_02430 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D AFK63_10125 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D AFK63_16095 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D AFK63_08720 altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58] D AFK63_16090 altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D AFK63_04990 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D AFK63_08525 bifunctional D-altronate/D-mannonate dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D AFK63_08535 D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D AFK63_07410 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AFK63_05455 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AFK63_07405 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AFK63_15125 araD; ribulose phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D AFK63_00160 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AFK63_15120 sugar isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D AFK63_15115 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16] D AFK63_19295 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D AFK63_19290 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D AFK63_17710 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D AFK63_17720 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] C 00051 Fructose and mannose metabolism [PATH:cmw00051] D AFK63_13785 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AFK63_16155 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AFK63_08160 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D AFK63_09395 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D AFK63_05425 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D AFK63_05420 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AFK63_05400 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D AFK63_05405 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D AFK63_17715 sugar isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14] D AFK63_17710 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D AFK63_17720 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D AFK63_05785 mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D AFK63_19070 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AFK63_10100 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D AFK63_01475 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AFK63_17880 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D AFK63_17870 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] D AFK63_05020 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D AFK63_19290 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D AFK63_05265 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AFK63_02235 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AFK63_17900 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AFK63_05025 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D AFK63_06860 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D AFK63_06855 PTS mannose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D AFK63_06850 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D AFK63_17865 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D AFK63_04585 phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] D AFK63_10120 2-deoxyglucose-6-phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68] C 00052 Galactose metabolism [PATH:cmw00052] D AFK63_12410 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D AFK63_12405 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D AFK63_12400 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D AFK63_12395 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D AFK63_05455 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AFK63_07405 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AFK63_12665 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AFK63_04180 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AFK63_14170 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D AFK63_15740 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D AFK63_17760 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D AFK63_16205 PTS galactitol transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D AFK63_16210 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D AFK63_16215 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D AFK63_16220 galactitol-1-phosphate 5-dehydrogenase K00094 E1.1.1.251; galactitol-1-phosphate 5-dehydrogenase [EC:1.1.1.251] D AFK63_19070 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AFK63_10100 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D AFK63_16195 kbaY; tagatose-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D AFK63_16200 tagatose-bisphosphate aldolase K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D AFK63_18270 galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D AFK63_18280 2-oxo-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D AFK63_18275 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D AFK63_16170 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D AFK63_12080 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D AFK63_13750 maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D AFK63_12960 oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:cmw00053] D AFK63_07410 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AFK63_07415 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D AFK63_15125 araD; ribulose phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] C 00500 Starch and sucrose metabolism [PATH:cmw00500] D AFK63_16165 PTS sucrose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D AFK63_03425 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D AFK63_16170 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D AFK63_12080 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D AFK63_13750 maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D AFK63_12960 oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D AFK63_05455 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AFK63_07405 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AFK63_05160 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AFK63_19500 bcsA; cellulose synthase K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D AFK63_16940 PTS lactose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D AFK63_01695 molecular chaperone TorD K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D AFK63_16935 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D AFK63_02500 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D AFK63_01705 PTS lactose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D AFK63_09615 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AFK63_02490 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AFK63_15600 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AFK63_01700 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AFK63_09995 diacetylchitobiose-6-phosphate hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D AFK63_12225 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D AFK63_12230 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D AFK63_09620 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D AFK63_02320 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D AFK63_15695 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D AFK63_02495 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D AFK63_19885 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D AFK63_19890 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D AFK63_19875 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D AFK63_19895 maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D AFK63_19935 maltose phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D AFK63_19880 glycogen debranching protein K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D AFK63_19260 malS; alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D AFK63_09030 glycosidase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D AFK63_00005 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D AFK63_08030 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D AFK63_04060 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D AFK63_12240 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_02745 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_03590 PTS glucose transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_09410 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_03585 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122] D AFK63_06145 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D AFK63_19640 alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D AFK63_06140 trehalose phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D AFK63_08730 treF; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D AFK63_07105 treA; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D AFK63_01575 PTS maltose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D AFK63_01570 trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D AFK63_12665 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AFK63_04180 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AFK63_00700 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AFK63_13785 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AFK63_16155 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cmw00520] D AFK63_10850 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AFK63_12700 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D AFK63_04060 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D AFK63_12720 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D AFK63_10795 N-acetylglucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59] D AFK63_12730 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D AFK63_12725 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D AFK63_13785 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AFK63_16155 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AFK63_18495 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AFK63_16375 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D AFK63_18500 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AFK63_03420 murQ; N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D AFK63_09510 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D AFK63_16450 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AFK63_17025 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AFK63_02750 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D AFK63_17370 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D AFK63_17365 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D AFK63_05485 dTDP-6-deoxy-3,4-keto-hexulose isomerase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D AFK63_09270 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D AFK63_10880 PTS glucose-specific subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D AFK63_12240 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_02745 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_03590 PTS glucose transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_09410 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_13140 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D AFK63_04180 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AFK63_12665 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AFK63_05455 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AFK63_07405 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AFK63_07410 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AFK63_12405 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D AFK63_12400 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D AFK63_12395 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D AFK63_07415 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D AFK63_06860 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D AFK63_06855 PTS mannose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D AFK63_06850 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D AFK63_00700 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AFK63_08160 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D AFK63_09395 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D AFK63_05425 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D AFK63_05420 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AFK63_05400 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D AFK63_05405 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D AFK63_19885 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cmw00620] D AFK63_00935 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AFK63_08185 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D AFK63_14870 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AFK63_14865 aceF; pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AFK63_14860 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AFK63_11670 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D AFK63_07430 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D AFK63_08175 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AFK63_17845 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D AFK63_08320 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AFK63_15880 alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D AFK63_08945 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AFK63_19120 zinc-binding dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AFK63_04570 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D AFK63_04565 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AFK63_09900 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AFK63_06675 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AFK63_14540 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AFK63_16745 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AFK63_16750 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AFK63_04460 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AFK63_11380 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D AFK63_08170 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D AFK63_17680 lldD; lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D AFK63_08665 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D AFK63_03285 thiamine pyrophosphate-binding protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D AFK63_11790 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D AFK63_08200 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D AFK63_05155 lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D AFK63_08280 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D AFK63_09570 glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D AFK63_14390 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D AFK63_11540 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D AFK63_11180 ghrA; bifunctional glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D AFK63_19370 bifunctional glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D AFK63_14160 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D AFK63_03880 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D AFK63_16635 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AFK63_17565 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D AFK63_09390 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AFK63_09385 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AFK63_01110 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AFK63_01105 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AFK63_01100 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C D AFK63_01095 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D D AFK63_17560 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AFK63_00075 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D AFK63_09970 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AFK63_00630 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D AFK63_02410 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AFK63_15060 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cmw00630] D AFK63_00635 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D AFK63_00935 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AFK63_00630 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D AFK63_16635 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AFK63_12565 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D AFK63_07600 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AFK63_14855 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AFK63_02410 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AFK63_10145 katE; hydroperoxidase K03781 katE; catalase [EC:1.11.1.6] D AFK63_11180 ghrA; bifunctional glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D AFK63_19370 bifunctional glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D AFK63_00165 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D AFK63_18710 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AFK63_03470 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AFK63_02310 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D AFK63_02300 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AFK63_14860 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AFK63_02305 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AFK63_13290 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D AFK63_08280 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D AFK63_06695 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D AFK63_17795 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D AFK63_17800 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D AFK63_17805 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D AFK63_17810 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma D AFK63_07390 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:cmw00640] D AFK63_00935 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AFK63_04570 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D AFK63_04565 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AFK63_14860 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AFK63_11670 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D AFK63_16725 quinone oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D AFK63_17075 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AFK63_04375 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AFK63_14540 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AFK63_16745 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AFK63_16750 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AFK63_04460 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AFK63_19745 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D AFK63_05575 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AFK63_12530 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AFK63_12525 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AFK63_14145 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AFK63_14855 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AFK63_08665 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D AFK63_11400 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D AFK63_01615 aldehyde reductase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] D AFK63_15800 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:cmw00650] D AFK63_02410 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AFK63_17075 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AFK63_04375 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AFK63_07430 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D AFK63_12550 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AFK63_12545 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AFK63_12560 sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AFK63_12555 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AFK63_01110 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AFK63_01105 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AFK63_01100 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C D AFK63_01095 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D D AFK63_19745 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D AFK63_05575 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AFK63_16660 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AFK63_08680 succinate dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D AFK63_18745 gamma-hydroxybutyrate dehydrogenase K08318 yihU; 4-hydroxybutyrate dehydrogenase / sulfolactaldehyde 3-reductase [EC:1.1.1.61 1.1.1.373] D AFK63_11670 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D AFK63_08185 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D AFK63_04225 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AFK63_17445 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AFK63_15050 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AFK63_15045 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AFK63_17440 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D AFK63_04220 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D AFK63_04230 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D AFK63_08940 3-oxoacyl-ACP reductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:cmw00660] D AFK63_04225 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AFK63_17445 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AFK63_15050 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AFK63_15045 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AFK63_17440 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D AFK63_04220 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D AFK63_12530 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AFK63_12525 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AFK63_15070 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AFK63_15075 leuD; isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AFK63_15065 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:cmw00562] D AFK63_03505 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AFK63_14120 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D AFK63_14150 inosose isomerase K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11] D AFK63_14110 inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D AFK63_14125 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D AFK63_14140 5-deoxyglucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D AFK63_14130 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D AFK63_14145 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AFK63_17900 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cmw00190] D AFK63_04610 NADH:ubiquinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D AFK63_04615 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D AFK63_04620 NADH:ubiquinone oxidoreductase K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D AFK63_04625 NADH dehydrogenase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D AFK63_04630 NADH dehydrogenase K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D AFK63_04635 NADH dehydrogenase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D AFK63_04640 NADH:ubiquinone oxidoreductase K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D AFK63_04645 NADH dehydrogenase K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D AFK63_04650 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D AFK63_04655 NADH:ubiquinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D AFK63_04660 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D AFK63_04665 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D AFK63_04670 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D AFK63_10840 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D AFK63_12550 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AFK63_12545 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AFK63_12560 sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AFK63_12555 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AFK63_01110 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AFK63_01105 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AFK63_01100 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C D AFK63_01095 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D D AFK63_13620 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AFK63_13615 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D AFK63_13610 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D AFK63_13605 cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D AFK63_13600 cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D AFK63_12520 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D AFK63_09245 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D AFK63_13955 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D AFK63_12515 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D AFK63_09250 ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D AFK63_13960 cytochrome D oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D AFK63_18520 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D AFK63_18510 ATP synthase F0F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D AFK63_18515 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D AFK63_18525 ATP F0F1 synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D AFK63_18505 atpC; ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D AFK63_18540 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AFK63_18530 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AFK63_18535 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D AFK63_01445 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D AFK63_03735 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:cmw00710] D AFK63_02230 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AFK63_14210 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AFK63_10260 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AFK63_05265 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AFK63_02235 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AFK63_01475 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AFK63_17880 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D AFK63_04275 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_04280 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_03870 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_05960 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_05965 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_02215 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_02260 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D AFK63_00260 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D AFK63_17900 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AFK63_00160 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AFK63_03875 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D AFK63_15330 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D AFK63_17560 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AFK63_00075 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D AFK63_03880 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D AFK63_16635 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:cmw00720] D AFK63_08185 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D AFK63_09970 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AFK63_17560 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AFK63_16635 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AFK63_09390 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AFK63_09385 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AFK63_12550 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AFK63_12545 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AFK63_12560 sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AFK63_12555 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AFK63_01110 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AFK63_01105 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AFK63_01100 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C D AFK63_01095 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D D AFK63_12525 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AFK63_12530 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AFK63_02410 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AFK63_10710 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AFK63_07600 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AFK63_14855 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AFK63_14540 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AFK63_16745 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AFK63_16750 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AFK63_04460 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AFK63_09750 formate dehydrogenase K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D AFK63_09755 spermidine/putrescine ABC transporter substrate-binding protein K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D AFK63_09770 formate dehydrogenase K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D AFK63_13130 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AFK63_17590 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AFK63_04565 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AFK63_04570 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D AFK63_00935 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:cmw00680] D AFK63_08320 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AFK63_05055 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D AFK63_17795 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D AFK63_17800 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D AFK63_17805 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D AFK63_17810 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma D AFK63_09750 formate dehydrogenase K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D AFK63_09755 spermidine/putrescine ABC transporter substrate-binding protein K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D AFK63_09770 formate dehydrogenase K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D AFK63_03470 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AFK63_02735 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AFK63_17560 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AFK63_16635 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AFK63_05265 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AFK63_02235 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AFK63_01475 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AFK63_17880 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D AFK63_19070 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AFK63_10100 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D AFK63_04570 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D AFK63_04565 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AFK63_00935 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AFK63_09970 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AFK63_12415 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AFK63_15400 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AFK63_19015 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D AFK63_02265 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AFK63_11650 phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AFK63_15490 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:cmw00910] D AFK63_07330 nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D AFK63_07285 nitrate/bicarbonate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D AFK63_07290 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D AFK63_07295 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D AFK63_07335 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D AFK63_07340 narH; nitrate reductase K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D AFK63_07350 narI; nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D AFK63_07305 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D AFK63_07300 nitrite reductase K00361 nasB; nitrite reductase [NAD(P)H] [EC:1.7.1.4] D AFK63_00215 nitrite reductase K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D AFK63_00210 nirD; nitrite reductase K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D AFK63_11775 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D AFK63_18710 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AFK63_16580 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AFK63_16585 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D AFK63_15975 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D AFK63_14035 calcium ABC transporter ATPase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D AFK63_14780 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D AFK63_16770 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:cmw00920] D AFK63_04030 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D AFK63_19075 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D AFK63_04035 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D AFK63_04040 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein D AFK63_04045 sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D AFK63_13940 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D AFK63_13930 taurine transporter subunit K15552 tauC; taurine transport system permease protein D AFK63_13935 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D AFK63_13925 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D AFK63_11495 alkanesulfonate transporter substrate-binding subunit K15553 ssuA; sulfonate transport system substrate-binding protein D AFK63_09000 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AFK63_11505 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D AFK63_09015 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AFK63_11510 ssuB; aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AFK63_09010 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AFK63_11500 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D AFK63_11490 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D AFK63_02800 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D AFK63_02795 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AFK63_02805 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D AFK63_01350 adenosine-3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D AFK63_02780 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D AFK63_02770 cysJ; sulfite reductase subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D AFK63_02775 sulfite reductase subunit beta K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D AFK63_03580 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AFK63_19915 glpE; thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D AFK63_19040 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AFK63_04075 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AFK63_13490 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AFK63_00625 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D AFK63_17600 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D AFK63_08495 dimethyl sulfoxide reductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D AFK63_08490 dimethyl sulfoxide reductase K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cmw00061] D AFK63_14540 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AFK63_16745 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AFK63_16750 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AFK63_04460 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AFK63_10915 acyl carrier protein K02078 acpP; acyl carrier protein D AFK63_10925 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AFK63_06895 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AFK63_10930 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AFK63_04425 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AFK63_10910 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AFK63_05950 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AFK63_05955 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AFK63_10920 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AFK63_11445 3-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D AFK63_14565 hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AFK63_07685 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D AFK63_06955 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AFK63_05970 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:cmw00071] D AFK63_02410 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AFK63_17080 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AFK63_04370 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AFK63_17075 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AFK63_04375 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AFK63_14360 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D AFK63_06955 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AFK63_05970 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AFK63_02520 acyl-ACP synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D AFK63_08320 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AFK63_07430 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D AFK63_08175 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AFK63_17845 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cmw00561] D AFK63_13290 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D AFK63_08945 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AFK63_19120 zinc-binding dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AFK63_15800 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D AFK63_17660 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D AFK63_00775 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D AFK63_10935 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D AFK63_01940 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AFK63_02105 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AFK63_00780 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D AFK63_17760 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:cmw00564] D AFK63_19035 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D AFK63_19910 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D AFK63_00775 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D AFK63_01940 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AFK63_02105 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AFK63_00780 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D AFK63_17205 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D AFK63_17185 lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5] D AFK63_04765 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D AFK63_19820 ugpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D AFK63_02520 acyl-ACP synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D AFK63_13980 ethanolamine ammonia-lyase K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D AFK63_13985 ethanolamine ammonia-lyase K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D AFK63_19080 CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D AFK63_14590 cdsA; CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D AFK63_03305 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D AFK63_01125 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D AFK63_06035 phosphatidylglycerophosphate synthetase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D AFK63_13670 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D AFK63_07610 phosphatidylglycerophosphatase K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] D AFK63_03430 hypothetical protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D AFK63_12265 cardiolipin synthase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D AFK63_07475 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D AFK63_11150 hypothetical protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:cmw00565] D AFK63_17205 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism [PATH:cmw00600] D AFK63_14170 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D AFK63_17760 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D AFK63_12700 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism D AFK63_17205 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism [PATH:cmw00591] D AFK63_17205 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D AFK63_06925 linoleoyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3] D AFK63_06930 linoleoyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3] C 00592 alpha-Linolenic acid metabolism [PATH:cmw00592] D AFK63_17205 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D AFK63_17080 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AFK63_04370 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:cmw01040] D AFK63_13210 acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D AFK63_13460 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D AFK63_07495 acyl-CoA esterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cmw00230] D AFK63_02015 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D AFK63_00105 nudE; adenosine nucleotide hydrolase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D AFK63_15510 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D AFK63_12665 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AFK63_00280 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AFK63_07205 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AFK63_04480 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D AFK63_16865 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D AFK63_03740 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D AFK63_06700 phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D AFK63_03440 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D AFK63_03745 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D AFK63_13170 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D AFK63_13165 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D AFK63_03800 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D AFK63_10740 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D AFK63_16860 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AFK63_13330 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D AFK63_13265 ushA; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D AFK63_02835 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AFK63_12740 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D AFK63_00095 nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D AFK63_13280 guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73] D AFK63_15505 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D AFK63_13795 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D AFK63_03255 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D AFK63_14785 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D AFK63_03665 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AFK63_03605 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AFK63_15405 yjjX; inositol monophosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D AFK63_02120 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D AFK63_14330 xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D AFK63_19150 xanthine dehydrogenase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D AFK63_19145 hypothetical protein K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D AFK63_19140 aldehyde oxidoreductase K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D AFK63_03670 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AFK63_04885 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AFK63_14925 guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7] D AFK63_18855 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D AFK63_03055 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AFK63_04780 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AFK63_03050 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AFK63_04775 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AFK63_01555 ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D AFK63_14650 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D AFK63_06245 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D AFK63_04595 5'-nucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D AFK63_18845 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D AFK63_03730 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D AFK63_17400 guanosine polyphosphate pyrophosphohydrolase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D AFK63_02720 relA; (p)ppGpp synthetase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D AFK63_17270 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D AFK63_01210 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D AFK63_09420 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D AFK63_05650 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D AFK63_02680 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D AFK63_01345 cpdB; 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D AFK63_13305 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AFK63_02725 mazG; nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AFK63_02025 diguanylate phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D AFK63_15175 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D AFK63_02805 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D AFK63_02800 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D AFK63_02795 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AFK63_19095 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D AFK63_15975 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:cmw00240] D AFK63_15210 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AFK63_15215 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AFK63_15995 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AFK63_16000 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D AFK63_11085 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AFK63_01530 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AFK63_11485 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D AFK63_18880 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D AFK63_07625 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D AFK63_14610 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D AFK63_03605 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AFK63_02725 mazG; nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AFK63_16700 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D AFK63_16060 metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D AFK63_02730 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D AFK63_11635 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D AFK63_10210 NTP pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65] D AFK63_05335 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D AFK63_13265 ushA; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D AFK63_02835 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AFK63_12740 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D AFK63_15550 dUMP phosphatase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-] D AFK63_17150 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D AFK63_13795 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D AFK63_03750 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D AFK63_01345 cpdB; 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D AFK63_15235 ribonucleoside hydrolase K12700 rihC; non-specific riboncleoside hydrolase [EC:3.2.2.-] D AFK63_02680 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D AFK63_05100 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D AFK63_15680 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D AFK63_01555 ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D AFK63_05340 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D AFK63_03055 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AFK63_04780 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AFK63_03050 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AFK63_04775 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AFK63_04595 5'-nucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D AFK63_10895 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D AFK63_18890 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AFK63_15515 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D AFK63_07425 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D AFK63_02565 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D AFK63_11270 pyrimidine monooxygenase K09018 rutA; pyrimidine oxygenase [EC:1.14.99.46] D AFK63_11295 FMN reductase K09024 rutF; flavin reductase [EC:1.5.1.-] D AFK63_11275 amidohydrolase K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110] D AFK63_11280 aminoacrylate peracid reductase K09021 rutC; aminoacrylate peracid reductase D AFK63_11285 aminoacrylate hydrolase K09023 rutD; aminoacrylate hydrolase [EC:3.5.1.-] D AFK63_08555 malonic semialdehyde reductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D AFK63_11290 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cmw00250] D AFK63_11535 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AFK63_03350 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D AFK63_10240 ansA; cytoplasmic asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D AFK63_18570 asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D AFK63_12745 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AFK63_14365 carbon-nitrogen hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D AFK63_04600 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D AFK63_01040 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D AFK63_17540 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AFK63_17535 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AFK63_01210 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D AFK63_10740 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D AFK63_15995 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AFK63_16000 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D AFK63_19745 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D AFK63_05575 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AFK63_16660 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AFK63_08680 succinate dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D AFK63_16580 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AFK63_16585 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D AFK63_11260 putA; transcriptional regulator K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AFK63_18710 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AFK63_15210 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AFK63_15215 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AFK63_08690 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D AFK63_18495 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AFK63_04480 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:cmw00260] D AFK63_00690 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AFK63_15360 thrA; aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D AFK63_17595 metL; aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D AFK63_19870 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AFK63_15355 serine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D AFK63_15350 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D AFK63_11795 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D AFK63_03470 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AFK63_11180 ghrA; bifunctional glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D AFK63_19370 bifunctional glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D AFK63_13290 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D AFK63_12415 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AFK63_15400 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AFK63_19015 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D AFK63_02265 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AFK63_11650 phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AFK63_15490 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D AFK63_08555 malonic semialdehyde reductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D AFK63_18975 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D AFK63_18980 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D AFK63_02310 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D AFK63_02300 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AFK63_14860 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AFK63_02305 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AFK63_03305 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D AFK63_09710 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D AFK63_09705 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D AFK63_13180 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D AFK63_13175 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D AFK63_06875 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AFK63_02670 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AFK63_17425 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AFK63_02470 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D AFK63_07530 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D AFK63_07535 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D AFK63_18350 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] C 00270 Cysteine and methionine metabolism [PATH:cmw00270] D AFK63_19040 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AFK63_04075 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AFK63_13490 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AFK63_13175 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D AFK63_01635 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AFK63_09415 transcriptional regulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AFK63_06300 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AFK63_13180 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D AFK63_13945 homocysteine methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D AFK63_00650 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AFK63_17160 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D AFK63_02195 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AFK63_14840 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D AFK63_14835 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D AFK63_14655 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D AFK63_03985 methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D AFK63_03255 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D AFK63_03990 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D AFK63_13030 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D AFK63_13035 haloacid dehalogenase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D AFK63_13040 acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D AFK63_00840 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D AFK63_06785 Free methionine-R-sulfoxide reductase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D AFK63_05755 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AFK63_10645 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AFK63_03005 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D AFK63_00690 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AFK63_15360 thrA; aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D AFK63_17595 metL; aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D AFK63_19870 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AFK63_00625 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D AFK63_17600 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D AFK63_17435 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AFK63_03000 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D AFK63_02165 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AFK63_11535 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AFK63_03580 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AFK63_08665 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D AFK63_02470 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D AFK63_06000 cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D AFK63_16635 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AFK63_06875 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AFK63_02670 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AFK63_04050 cysM; cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D AFK63_02265 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AFK63_11650 phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:cmw00280] D AFK63_17435 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AFK63_14860 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AFK63_17075 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AFK63_04375 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AFK63_17080 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AFK63_04370 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AFK63_14145 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AFK63_05575 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AFK63_02410 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cmw00290] D AFK63_17425 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AFK63_15070 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AFK63_15075 leuD; isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AFK63_15065 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D AFK63_04225 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AFK63_17445 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AFK63_15050 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AFK63_15045 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AFK63_17440 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D AFK63_17415 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D AFK63_17430 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D AFK63_17435 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AFK63_19255 avtA; valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D AFK63_04600 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D AFK63_15060 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:cmw00300] D AFK63_00690 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AFK63_15360 thrA; aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D AFK63_17595 metL; aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D AFK63_19870 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AFK63_03790 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AFK63_15220 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D AFK63_14635 dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D AFK63_00240 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AFK63_03825 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AFK63_17255 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AFK63_02480 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D AFK63_15015 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AFK63_15010 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cmw00310] D AFK63_12535 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AFK63_14860 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AFK63_17075 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AFK63_04375 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AFK63_02410 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AFK63_02470 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D AFK63_14530 lysine decarboxylase LdcC K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18] D AFK63_16040 putrescine--2-oxoglutarate aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D AFK63_09215 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D AFK63_05575 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AFK63_16660 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AFK63_08345 hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D AFK63_09950 hypothetical protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] C 00220 Arginine biosynthesis [PATH:cmw00220] D AFK63_15960 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D AFK63_15980 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D AFK63_17540 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AFK63_17535 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AFK63_08595 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D AFK63_19335 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D AFK63_08590 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D AFK63_15970 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D AFK63_08690 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D AFK63_18710 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AFK63_15210 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AFK63_15215 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AFK63_15975 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D AFK63_11535 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AFK63_04600 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D AFK63_02605 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D AFK63_17545 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D AFK63_17550 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D AFK63_00240 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AFK63_17555 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:cmw00330] D AFK63_15680 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D AFK63_02200 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D AFK63_02205 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D AFK63_12655 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AFK63_01740 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AFK63_14835 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D AFK63_14840 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D AFK63_16040 putrescine--2-oxoglutarate aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D AFK63_09185 spermidine dehydrogenase K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6] D AFK63_09215 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D AFK63_08510 spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D AFK63_10195 arginine succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D AFK63_10185 succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D AFK63_10200 acetylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D AFK63_10190 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D AFK63_10180 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D AFK63_09865 gamma-glutamylputrescine synthetase K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11] D AFK63_19645 gamma-glutamylputrescine synthetase K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11] D AFK63_09885 gamma-glutamylputrescine oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D AFK63_09880 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D AFK63_09870 gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94] D AFK63_05570 gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94] D AFK63_13835 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D AFK63_11260 putA; transcriptional regulator K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AFK63_14310 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AFK63_14305 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D AFK63_11535 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:cmw00340] D AFK63_05560 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D AFK63_05525 phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D AFK63_05535 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D AFK63_05540 hisH; imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D AFK63_05530 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D AFK63_05545 imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D AFK63_05550 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AFK63_05555 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:cmw00350] D AFK63_11535 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AFK63_05550 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AFK63_00840 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D AFK63_08320 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AFK63_07430 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D AFK63_08175 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AFK63_17845 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D AFK63_16660 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:cmw00360] D AFK63_11535 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AFK63_05550 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AFK63_00840 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D AFK63_19835 acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D AFK63_07020 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D AFK63_02085 peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00380 Tryptophan metabolism [PATH:cmw00380] D AFK63_12535 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AFK63_14860 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AFK63_17075 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AFK63_04375 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AFK63_02410 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AFK63_16310 tnaA; cysteine desulfhydrase K01667 tnaA; tryptophanase [EC:4.1.99.1] D AFK63_04175 indolepyruvate decarboxylase K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74] D AFK63_10145 katE; hydroperoxidase K03781 katE; catalase [EC:1.11.1.6] D AFK63_02085 peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cmw00400] D AFK63_03215 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AFK63_12420 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AFK63_09980 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AFK63_00145 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D AFK63_16740 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D AFK63_00585 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D AFK63_14050 quinate dehydrogenase K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8] D AFK63_00140 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D AFK63_13810 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D AFK63_11645 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D AFK63_04395 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D AFK63_07550 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AFK63_07545 glutamine amidotransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18] D AFK63_07540 indole-3-glycerol phosphate synthase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D AFK63_07530 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D AFK63_07535 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D AFK63_03220 tyrA; chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D AFK63_03230 pheA; chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D AFK63_11535 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AFK63_05550 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AFK63_00840 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:cmw00410] D AFK63_14755 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D AFK63_19745 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D AFK63_05575 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AFK63_09185 spermidine dehydrogenase K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6] D AFK63_09215 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D AFK63_14750 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D AFK63_17075 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AFK63_04375 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AFK63_14145 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:cmw00430] D AFK63_19830 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AFK63_13925 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D AFK63_04565 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AFK63_04570 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D AFK63_00970 phnH; carbon-phosphorus lyase complex subunit K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] C 00450 Selenocompound metabolism [PATH:cmw00450] D AFK63_17600 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D AFK63_01635 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AFK63_09415 transcriptional regulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AFK63_06300 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AFK63_00650 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AFK63_17160 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D AFK63_13175 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D AFK63_09920 cysteine sulfinate desulfinase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D AFK63_11710 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D AFK63_02800 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D AFK63_02795 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AFK63_10225 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D AFK63_17855 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D AFK63_01535 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D AFK63_05190 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AFK63_18410 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:cmw00460] D AFK63_05160 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AFK63_19830 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AFK63_10240 ansA; cytoplasmic asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D AFK63_18570 asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D AFK63_03470 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cmw00470] D AFK63_00835 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AFK63_07025 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AFK63_13860 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AFK63_14980 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AFK63_02470 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D AFK63_08690 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D AFK63_17500 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D AFK63_15000 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AFK63_08070 L-alanine-DL-glutamate epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D AFK63_06000 cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D AFK63_17255 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AFK63_02480 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D AFK63_07020 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:cmw00480] D AFK63_19830 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AFK63_07260 transporter K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D AFK63_12595 lactam utilization protein LamB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D AFK63_12605 hypothetical protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D AFK63_12600 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D AFK63_13075 gamma-glutamyl ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D AFK63_03000 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D AFK63_02165 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AFK63_15920 aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AFK63_03555 aminopeptidase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D AFK63_11515 pepN; aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D AFK63_14335 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D AFK63_11980 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AFK63_04535 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AFK63_00905 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AFK63_09485 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AFK63_19590 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D AFK63_10710 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AFK63_05515 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D AFK63_06685 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AFK63_13120 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D AFK63_10010 btuE; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D AFK63_12655 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AFK63_01740 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AFK63_14835 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:cmw00511] D AFK63_14170 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D AFK63_12700 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D AFK63_08735 glycoside hydrolase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] C 00540 Lipopolysaccharide biosynthesis [PATH:cmw00540] D AFK63_14560 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D AFK63_14960 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D AFK63_14570 lpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D AFK63_13160 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D AFK63_14555 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D AFK63_11610 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D AFK63_16490 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D AFK63_07245 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D AFK63_16495 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D AFK63_11595 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AFK63_18930 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D AFK63_11120 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AFK63_06405 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D AFK63_06560 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D AFK63_04975 hypothetical protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D AFK63_09555 hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D AFK63_19435 phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D AFK63_12940 Lipid A palmitoyltransferase PagP K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D AFK63_13990 lipid A biosynthesis palmitoleoyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D AFK63_14355 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D AFK63_01975 heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D AFK63_14455 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D AFK63_18970 rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D AFK63_18960 ADP-heptose--LPS heptosyltransferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D AFK63_18965 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D AFK63_18955 heptosyltransferase K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D AFK63_18940 glycosyl transferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D AFK63_18950 glycosyl transferase family 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D AFK63_18990 polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis [PATH:cmw00542] D AFK63_17380 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cmw00541] D AFK63_05455 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AFK63_07405 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AFK63_12395 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D AFK63_07410 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AFK63_07415 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D AFK63_17355 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AFK63_05470 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AFK63_05460 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AFK63_17360 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AFK63_05475 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AFK63_05465 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D AFK63_17345 TDP-4-oxo-6-deoxy-D-glucose aminotransferase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D AFK63_17350 TDP-fucosamine acetyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210] D AFK63_08160 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D AFK63_09395 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D AFK63_05425 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D AFK63_05420 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AFK63_05400 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D AFK63_05405 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D AFK63_18500 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AFK63_17370 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D AFK63_17365 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D AFK63_05485 dTDP-6-deoxy-3,4-keto-hexulose isomerase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] C 00550 Peptidoglycan biosynthesis [PATH:cmw00550] D AFK63_16450 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AFK63_17025 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AFK63_14985 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D AFK63_15000 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AFK63_15015 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AFK63_13860 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AFK63_14980 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AFK63_15010 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D AFK63_14595 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AFK63_01950 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AFK63_11965 UDP pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D AFK63_15005 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AFK63_14990 murG; UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AFK63_16555 mtgA; peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D AFK63_00110 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AFK63_14705 mrcB; bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D AFK63_03600 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D AFK63_12880 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AFK63_15020 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AFK63_11975 peptidase M15 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AFK63_12895 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AFK63_05595 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AFK63_16405 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:cmw00552] D AFK63_01950 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AFK63_11965 UDP pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D AFK63_17380 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:cmw00543] D AFK63_05430 UDP-glucose lipid carrier transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D AFK63_05415 glycosyl transferase K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI D AFK63_05395 acyl transferase K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-] D AFK63_05390 colanic acid biosynthesis glycosyl transferase K13683 wcaE; putative colanic acid biosynthesis glycosyltransferase WcaE [EC:2.4.-.-] D AFK63_05380 glycosyl transferase K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D AFK63_05375 acyl transferase K03819 wcaB; putative colanic acid biosynthesis acetyltransferase WcaB [EC:2.3.1.-] D AFK63_05370 glycosyl transferase K25875 wcaA; putative colanic acid biosynthesis glycosyltransferase WcaA D AFK63_05445 colanic acid biosynthesis protein K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] D AFK63_05440 colanic acid biosynthesis protein K16710 wcaK; colanic acid/amylovoran biosynthesis protein WcaK/AmsJ D AFK63_17380 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D AFK63_17325 UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D AFK63_17335 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D AFK63_19040 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cmw00730] D AFK63_16905 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D AFK63_05260 hydroxymethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D AFK63_16915 molybdopterin biosynthesis protein MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D AFK63_03520 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AFK63_13645 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D AFK63_16930 thiH; thiamine biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D AFK63_13660 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D AFK63_16925 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D AFK63_05255 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D AFK63_16910 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D AFK63_13675 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D AFK63_01130 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D AFK63_10855 thiK; thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89] D AFK63_13305 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cmw00740] D AFK63_07605 ribA; GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D AFK63_13690 ribD; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D AFK63_11950 sugar phosphatase K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D AFK63_17240 flavin mononucleotide phosphatase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D AFK63_01985 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D AFK63_13685 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D AFK63_09630 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D AFK63_15260 FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D AFK63_17090 fre; FMN reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D AFK63_11490 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D AFK63_05255 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D AFK63_02015 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D AFK63_10720 phosphatase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-] D AFK63_04485 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AFK63_02875 phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:cmw00750] D AFK63_09500 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D AFK63_09490 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D AFK63_19165 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D AFK63_06585 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D AFK63_02225 gapA; glyceraldehyde-3-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D AFK63_04440 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D AFK63_11650 phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AFK63_15160 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D AFK63_03400 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D AFK63_15350 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:cmw00760] D AFK63_03350 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D AFK63_12440 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D AFK63_14905 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D AFK63_11520 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D AFK63_15505 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D AFK63_15480 transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D AFK63_13265 ushA; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D AFK63_02835 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AFK63_12740 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D AFK63_12865 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D AFK63_02725 mazG; nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AFK63_16895 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D AFK63_10155 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D AFK63_02940 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D AFK63_10245 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D AFK63_00285 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] D AFK63_10790 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D AFK63_03160 ppnK; inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D AFK63_17525 pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D AFK63_09340 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D AFK63_09335 pntB; pyridine nucleotide transhydrogenase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D AFK63_16660 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AFK63_08680 succinate dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] C 00770 Pantothenate and CoA biosynthesis [PATH:cmw00770] D AFK63_04225 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AFK63_17445 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AFK63_15050 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AFK63_15045 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AFK63_17440 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D AFK63_17415 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D AFK63_17430 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D AFK63_14745 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D AFK63_13635 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D AFK63_14750 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D AFK63_17015 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D AFK63_18895 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D AFK63_02725 mazG; nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AFK63_18920 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D AFK63_14930 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D AFK63_03405 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D AFK63_13735 ACP phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D AFK63_17435 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AFK63_14755 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:cmw00780] D AFK63_12325 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D AFK63_04425 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AFK63_10910 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AFK63_05950 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AFK63_05955 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AFK63_10920 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AFK63_14565 hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AFK63_07685 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D AFK63_00025 carboxylesterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D AFK63_12330 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D AFK63_12340 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D AFK63_12320 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D AFK63_12335 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D AFK63_17020 biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D AFK63_19405 trimethylamine N-oxide reductase I catalytic subunit K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] C 00785 Lipoic acid metabolism [PATH:cmw00785] D AFK63_12905 lipoate--protein ligase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D AFK63_12915 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D AFK63_15500 lplA; lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D AFK63_14860 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AFK63_14870 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AFK63_14865 aceF; pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AFK63_12540 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D AFK63_12535 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AFK63_02310 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D AFK63_02300 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AFK63_02305 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cmw00790] D AFK63_05065 folE; GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D AFK63_06360 nudB; dihydroneopterin triphosphate pyrophosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D AFK63_01945 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D AFK63_14740 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D AFK63_16380 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D AFK63_15180 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D AFK63_04465 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D AFK63_07605 ribA; GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D AFK63_00235 anthranilate synthase K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D AFK63_06885 pabB; aminodeoxychorismate synthase K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D AFK63_10905 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D AFK63_09355 dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D AFK63_02765 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D AFK63_02760 pyrroloquinoline quinone biosynthesis protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D AFK63_13525 queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D AFK63_02685 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D AFK63_12300 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D AFK63_12290 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D AFK63_12280 moaE; molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D AFK63_15325 mogA; molybdenum cofactor biosynthesis protein MogA K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D AFK63_12295 molybdopterin biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D AFK63_12060 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D AFK63_19160 molybdopterin-guanine dinucleotide biosynthesis protein MobA K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D AFK63_18655 mobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:cmw00670] D AFK63_15180 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D AFK63_09355 dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D AFK63_13130 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AFK63_03470 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AFK63_03740 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D AFK63_16860 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AFK63_00555 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D AFK63_02300 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AFK63_00650 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AFK63_02565 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D AFK63_07390 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AFK63_17590 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AFK63_02270 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cmw00860] D AFK63_04125 gltX; glutamine--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AFK63_07220 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D AFK63_14680 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AFK63_13910 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AFK63_17275 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D AFK63_17280 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D AFK63_16890 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D AFK63_03995 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D AFK63_18695 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D AFK63_17055 hemG; protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D AFK63_13285 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D AFK63_17285 uroporphyrin-III methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D AFK63_00200 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D AFK63_02790 sirohydrochlorin ferrochelatase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D AFK63_13620 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AFK63_07570 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D AFK63_00380 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cmw00130] D AFK63_00765 ubiC; chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D AFK63_00770 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D AFK63_17095 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D AFK63_04485 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AFK63_02875 phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AFK63_02295 oxidoreductase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D AFK63_04785 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D AFK63_02290 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D AFK63_17140 ubiE; ubiquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D AFK63_12785 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D AFK63_04690 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D AFK63_03910 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D AFK63_04695 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D AFK63_04700 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D AFK63_04710 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D AFK63_04715 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D AFK63_04705 dihydroxynaphthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36] D AFK63_09945 thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D AFK63_17640 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D AFK63_07160 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D AFK63_11310 NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D AFK63_01335 quinone oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cmw00900] D AFK63_13660 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D AFK63_14600 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D AFK63_02820 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D AFK63_07210 kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D AFK63_02825 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D AFK63_03620 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D AFK63_15240 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D AFK63_02410 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AFK63_04485 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AFK63_02875 phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AFK63_01885 isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D AFK63_13655 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D AFK63_01890 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D AFK63_16440 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D AFK63_14595 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:cmw00906] D AFK63_01865 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D AFK63_01870 phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D AFK63_01875 lycopene cyclase K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19] D AFK63_01860 beta-carotene hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24] D AFK63_01880 Zeaxanthin glucosyltransferase K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:cmw00907] D AFK63_17075 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AFK63_04375 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AFK63_15880 alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D AFK63_17080 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AFK63_04370 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D AFK63_04275 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_04280 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_03870 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_05960 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_05965 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AFK63_02215 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:cmw00523] D AFK63_17355 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AFK63_05470 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AFK63_05460 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AFK63_17360 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AFK63_05475 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AFK63_05465 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:cmw01053] D AFK63_04690 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D AFK63_03910 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D AFK63_03920 isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D AFK63_03925 2,3-dihydroxybenzoate-2,3-dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28] D AFK63_13065 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D AFK63_03915 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D AFK63_13045 entF; enterobactin synthase subunit F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D AFK63_03930 thioesterase K24147 entH; proofreading thioesterase EntH C 01055 Biosynthesis of vancomycin group antibiotics D AFK63_05460 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AFK63_17360 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:cmw00946] D AFK63_05160 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:cmw00332] D AFK63_14310 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AFK63_14305 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:cmw00261] D AFK63_02800 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D AFK63_02795 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AFK63_00690 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AFK63_15360 thrA; aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D AFK63_17595 metL; aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D AFK63_19870 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AFK63_03790 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AFK63_15220 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:cmw00521] D AFK63_04180 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AFK63_12665 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AFK63_03505 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AFK63_14120 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D AFK63_17355 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AFK63_05470 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AFK63_05460 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AFK63_17360 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AFK63_05475 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AFK63_05465 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D AFK63_04180 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:cmw00525] D AFK63_17355 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AFK63_05470 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AFK63_05460 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AFK63_17360 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:cmw00401] D AFK63_03220 tyrA; chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D AFK63_11535 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AFK63_05550 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AFK63_00840 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D AFK63_07550 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D AFK63_10925 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AFK63_05950 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AFK63_05955 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AFK63_10920 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AFK63_07685 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D AFK63_10915 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:cmw00999] D AFK63_02195 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AFK63_00585 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D AFK63_05160 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:cmw00362] D AFK63_17080 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AFK63_04370 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AFK63_08975 Tautomerase PptA K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D AFK63_03480 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D AFK63_03545 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D AFK63_04375 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AFK63_17075 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AFK63_02410 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:cmw00627] D AFK63_11380 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D AFK63_02880 phenolic acid decarboxylase K01612 bsdC; vanillate/4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.- 4.1.1.61] D AFK63_02885 4-hydroxybenzoate decarboxylase K21759 bsdD; vanillate/4-hydroxybenzoate decarboxylase subunit D [EC:4.1.1.- 4.1.1.61] D AFK63_04485 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AFK63_02875 phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:cmw00364] D AFK63_17155 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:cmw00625] D AFK63_08175 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AFK63_17845 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D AFK63_08320 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AFK63_07430 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:cmw00361] D AFK63_17155 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:cmw00623] D AFK63_17155 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation D AFK63_08975 Tautomerase PptA K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation [PATH:cmw00633] D AFK63_11905 nitroreductase A K10678 nfsA; nitroreductase [EC:1.-.-.-] D AFK63_08980 dihydropteridine reductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34] D AFK63_09565 N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D AFK63_17080 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AFK63_04370 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation C 00791 Atrazine degradation [PATH:cmw00791] D AFK63_08590 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D AFK63_08595 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D AFK63_19335 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] C 00930 Caprolactam degradation [PATH:cmw00930] D AFK63_17075 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AFK63_04375 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation D AFK63_08975 Tautomerase PptA K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:cmw00626] D AFK63_08175 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AFK63_17845 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D AFK63_08320 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AFK63_07430 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cmw03020] D AFK63_16955 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AFK63_16950 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AFK63_00515 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AFK63_18850 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cmw03010] D AFK63_11630 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D AFK63_14620 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D AFK63_00425 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D AFK63_00510 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D AFK63_00480 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D AFK63_01270 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D AFK63_00360 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D AFK63_00465 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D AFK63_16605 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D AFK63_00390 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D AFK63_00505 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D AFK63_00355 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D AFK63_00500 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D AFK63_00460 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D AFK63_16330 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D AFK63_03185 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D AFK63_00440 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D AFK63_01280 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D AFK63_00415 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D AFK63_15265 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D AFK63_01930 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D AFK63_16970 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D AFK63_00410 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D AFK63_00395 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D AFK63_00400 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D AFK63_00455 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D AFK63_00470 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D AFK63_16960 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D AFK63_01285 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D AFK63_16965 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D AFK63_16975 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D AFK63_16610 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D AFK63_00445 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D AFK63_00490 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D AFK63_00430 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D AFK63_00520 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D AFK63_00475 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D AFK63_03200 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D AFK63_10035 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D AFK63_16435 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D AFK63_00420 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D AFK63_00405 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D AFK63_00450 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D AFK63_04920 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D AFK63_16430 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D AFK63_18905 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D AFK63_00435 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D AFK63_00485 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D AFK63_17610 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AFK63_13390 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AFK63_10940 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D AFK63_18910 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D AFK63_10040 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D AFK63_13385 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D AFK63_00605 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_18630 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_16855 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_03265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_14450 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_17050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_17495 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_17035 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_17480 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_14435 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_16845 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_00615 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_03275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_18640 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_00620 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_17030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_14430 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_16830 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_18645 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_16840 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_17475 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_03280 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cmw00970] D AFK63_14440 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AFK63_17040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AFK63_17485 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AFK63_04140 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AFK63_04145 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AFK63_02970 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AFK63_02980 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AFK63_02975 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AFK63_02985 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AFK63_17315 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AFK63_04300 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AFK63_13125 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AFK63_05625 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AFK63_05665 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AFK63_05645 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AFK63_05685 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AFK63_14370 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AFK63_17470 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AFK63_14425 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AFK63_06045 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D AFK63_12760 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AFK63_12765 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AFK63_12775 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AFK63_12780 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AFK63_00610 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AFK63_16850 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AFK63_03270 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AFK63_18635 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AFK63_01140 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AFK63_06040 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AFK63_01145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AFK63_01150 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AFK63_02390 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AFK63_17000 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AFK63_17310 tRNA-His K14226 tRNA-His; tRNA His D AFK63_14445 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AFK63_17490 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AFK63_17045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AFK63_12755 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_15825 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_06050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_15570 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_15580 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_15575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_17305 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_16365 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_04105 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AFK63_12460 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AFK63_12445 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AFK63_12450 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AFK63_12470 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AFK63_12455 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AFK63_02615 tRNA-Met K14230 tRNA-Met; tRNA Met D AFK63_02620 tRNA-Met K14230 tRNA-Met; tRNA Met D AFK63_16360 tRNA-Met K14230 tRNA-Met; tRNA Met D AFK63_12770 tRNA-Met K14230 tRNA-Met; tRNA Met D AFK63_12750 tRNA-Met K14230 tRNA-Met; tRNA Met D AFK63_01905 tRNA-Met K14230 tRNA-Met; tRNA Met D AFK63_01015 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AFK63_01730 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AFK63_04900 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AFK63_19440 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AFK63_17300 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AFK63_11360 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AFK63_05695 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AFK63_02965 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AFK63_11205 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AFK63_11215 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AFK63_14300 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AFK63_16835 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AFK63_16995 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AFK63_17010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AFK63_17465 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AFK63_07385 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AFK63_07380 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AFK63_17005 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AFK63_09640 tRNA-Val K14237 tRNA-Val; tRNA Val D AFK63_04110 tRNA-Val K14237 tRNA-Val; tRNA Val D AFK63_12465 tRNA-Val K14237 tRNA-Val; tRNA Val D AFK63_04120 tRNA-Val K14237 tRNA-Val; tRNA Val D AFK63_04115 tRNA-Val K14237 tRNA-Val; tRNA Val D AFK63_09645 tRNA-Val K14237 tRNA-Val; tRNA Val D AFK63_19240 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D AFK63_04125 gltX; glutamine--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AFK63_12710 glutamate--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D AFK63_02955 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AFK63_15225 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AFK63_11525 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D AFK63_19320 glycyl-tRNA synthetase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AFK63_19325 hypothetical protein K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AFK63_10050 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AFK63_11685 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AFK63_17855 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D AFK63_01535 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D AFK63_13150 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AFK63_05190 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AFK63_18410 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AFK63_00555 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D AFK63_15930 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AFK63_12850 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AFK63_15255 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AFK63_02380 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AFK63_06280 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AFK63_14485 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AFK63_03625 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AFK63_10030 phenylalanyl-tRNA synthetase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AFK63_10025 pheT; phenylalanine--tRNA ligase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AFK63_09495 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AFK63_00170 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cmw03060] D AFK63_00495 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AFK63_16985 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AFK63_16370 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AFK63_13715 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AFK63_13710 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AFK63_13720 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AFK63_18320 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D AFK63_14950 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AFK63_19030 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AFK63_14955 secretion protein K13301 secM; secretion monitor D AFK63_03180 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AFK63_19720 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D AFK63_17125 preprotein translocase subunit SecA K03116 tatA; sec-independent protein translocase protein TatA D AFK63_17120 preprotein translocase K03117 tatB; sec-independent protein translocase protein TatB D AFK63_17115 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D AFK63_12920 tatE; preprotein translocase subunit SecE K03425 tatE; sec-independent protein translocase protein TatE D AFK63_03380 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D AFK63_15250 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cmw04122] D AFK63_03520 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AFK63_03580 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AFK63_19675 sulfur transfer protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D AFK63_00350 sulfur relay protein TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D AFK63_00345 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D AFK63_00340 sulfur relay protein TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D AFK63_11375 sulfur relay protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D AFK63_10730 mnmA; tRNA 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D AFK63_12280 moaE; molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D AFK63_12300 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D AFK63_12285 moaD; molybdopterin synthase small subunit K03636 moaD; sulfur-carrier protein D AFK63_12065 molybdopterin-synthase adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D AFK63_12290 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D AFK63_15325 mogA; molybdenum cofactor biosynthesis protein MogA K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D AFK63_12295 molybdopterin biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D AFK63_13645 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D AFK63_16920 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D AFK63_16915 molybdopterin biosynthesis protein MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:cmw03018] D AFK63_02550 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D AFK63_10965 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D AFK63_17395 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D AFK63_02735 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AFK63_16325 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AFK63_12250 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D AFK63_01220 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AFK63_16315 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AFK63_17200 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AFK63_17385 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D AFK63_19070 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AFK63_15310 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AFK63_01055 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AFK63_01185 hfq; RNA-binding protein K03666 hfq; host factor-I protein D AFK63_03735 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AFK63_14735 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:cmw03030] D AFK63_06735 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D AFK63_14375 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AFK63_14545 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AFK63_13325 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AFK63_10890 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AFK63_12860 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AFK63_15560 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D AFK63_15925 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AFK63_18305 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AFK63_00830 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AFK63_01925 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D AFK63_00870 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AFK63_14380 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D AFK63_14550 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D AFK63_18680 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AFK63_04090 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AFK63_18860 ligB; aromatic ring-opening dioxygenase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cmw03410] D AFK63_09475 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AFK63_03330 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D AFK63_01805 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D AFK63_18915 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AFK63_12570 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D AFK63_05325 3-methyladenine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D AFK63_19415 DNA-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AFK63_01910 formamidopyrimidine-DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D AFK63_10205 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AFK63_05035 endonuclease K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D AFK63_18680 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AFK63_02370 ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AFK63_04090 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AFK63_18860 ligB; aromatic ring-opening dioxygenase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cmw03420] D AFK63_10815 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D AFK63_00865 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D AFK63_12310 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D AFK63_06030 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D AFK63_17235 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AFK63_18680 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AFK63_04090 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AFK63_18860 ligB; aromatic ring-opening dioxygenase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:cmw03430] D AFK63_02890 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D AFK63_01175 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D AFK63_02545 DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH D AFK63_17235 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AFK63_05585 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D AFK63_03660 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D AFK63_13650 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D AFK63_06730 exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D AFK63_02370 ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AFK63_00870 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AFK63_14545 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AFK63_18305 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AFK63_13325 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AFK63_12860 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AFK63_10890 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AFK63_14375 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AFK63_06735 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D AFK63_15925 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AFK63_15560 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D AFK63_04090 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AFK63_18860 ligB; aromatic ring-opening dioxygenase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AFK63_00155 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:cmw03440] D AFK63_02370 ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AFK63_00870 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AFK63_18300 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D AFK63_03395 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D AFK63_13315 recR; recombination protein RecR K06187 recR; recombination protein RecR D AFK63_02945 recA; recombinase A K03553 recA; recombination protein RecA D AFK63_18680 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AFK63_06375 ruvA; ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D AFK63_06380 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AFK63_06370 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AFK63_18835 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D AFK63_02595 recB; exonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D AFK63_02585 recC; exonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D AFK63_02600 recD; exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D AFK63_14545 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AFK63_18305 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AFK63_13325 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AFK63_12860 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AFK63_10890 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AFK63_14375 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AFK63_06735 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D AFK63_15925 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AFK63_15560 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D AFK63_17615 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D AFK63_01275 primosomal replication protein N K02686 priB; primosomal replication protein N D AFK63_13340 primosomal protein K04067 priC; primosomal replication protein N'' D AFK63_15640 primosomal protein DnaI K02317 dnaT; DNA replication protein DnaT C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:cmw03250] D AFK63_00225 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cmw02010] D AFK63_04030 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D AFK63_19075 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D AFK63_04035 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D AFK63_04040 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein D AFK63_04045 sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D AFK63_07285 nitrate/bicarbonate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D AFK63_07290 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D AFK63_07295 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D AFK63_13940 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D AFK63_13930 taurine transporter subunit K15552 tauC; taurine transport system permease protein D AFK63_13935 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D AFK63_11495 alkanesulfonate transporter substrate-binding subunit K15553 ssuA; sulfonate transport system substrate-binding protein D AFK63_09000 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AFK63_11505 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D AFK63_09015 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AFK63_11510 ssuB; aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AFK63_09010 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AFK63_12380 modA; molybdate transporter K02020 modA; molybdate transport system substrate-binding protein D AFK63_12375 modB; molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein D AFK63_12370 modC; molybdate transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D AFK63_12390 molybdenum ABC transporter ATP-binding protein K05776 modF; molybdate transport system ATP-binding protein D AFK63_15090 tbpA; thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D AFK63_15095 thiP; thiamine ABC transporter permease K02063 thiP; thiamine transport system permease protein D AFK63_15100 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D AFK63_10785 potD; spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D AFK63_10780 potC; spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D AFK63_10775 potB; spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D AFK63_10770 potA; putrescine/spermidine ABC transporter ATPase K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D AFK63_11890 spermidine/putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AFK63_11875 spermidine/putrescine ABC transporter permease K11074 potI; putrescine transport system permease protein D AFK63_11880 spermidine/putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein D AFK63_11885 potG; putrescine transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D AFK63_03035 proX; glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AFK63_03040 glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D AFK63_03045 glycine/betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D AFK63_08465 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D AFK63_05165 osmoprotectant uptake system substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D AFK63_05180 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D AFK63_08460 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D AFK63_08470 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D AFK63_05170 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D AFK63_08455 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D AFK63_05175 ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D AFK63_00745 malE; sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein D AFK63_00740 malF; maltose transporter K10109 malF; maltose/maltodextrin transport system permease protein D AFK63_00735 malG; maltose transporter permease K10110 malG; maltose/maltodextrin transport system permease protein D AFK63_00750 maltose/maltodextrin transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AFK63_12970 ABC transporter K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AFK63_15765 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AFK63_08035 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AFK63_15760 cyclodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D AFK63_15755 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D AFK63_15750 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D AFK63_02440 sugar ABC transporter substrate-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein D AFK63_02455 sugar ABC transporter permease K10193 togM; oligogalacturonide transport system permease protein D AFK63_02450 sugar ABC transporter permease K10194 togN; oligogalacturonide transport system permease protein D AFK63_02445 sugar ABC transporter ATP-binding protein K10195 togA; oligogalacturonide transport system ATP-binding protein D AFK63_12985 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D AFK63_12980 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D AFK63_12975 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D AFK63_16465 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D AFK63_16470 phospholipid ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D AFK63_16475 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D AFK63_16460 phospholipid ABC transporter substrate-binding protein K07122 mlaB; phospholipid transport system transporter-binding protein D AFK63_16480 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D AFK63_18605 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein D AFK63_18600 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D AFK63_18595 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D AFK63_18590 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D AFK63_06125 sugar ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein D AFK63_06135 araH; L-arabinose transporter permease K10538 araH; L-arabinose transport system permease protein D AFK63_06130 araG; L-arabinose transporter ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D AFK63_01450 sugar ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D AFK63_01465 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D AFK63_01460 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D AFK63_01455 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D AFK63_05080 sugar ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D AFK63_05090 mglC; beta-methylgalactoside transporter permease K10541 mglC; methyl-galactoside transport system permease protein D AFK63_05085 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D AFK63_19285 xylF; D-xylose transporter subunit XylF K10543 xylF; D-xylose transport system substrate-binding protein D AFK63_19275 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D AFK63_19280 xylose transporter K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D AFK63_17725 ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein D AFK63_17735 branched-chain amino acid ABC transporter permease K10560 rhaP; rhamnose transport system permease protein D AFK63_17740 branched-chain amino acid ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein D AFK63_17730 hypothetical protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D AFK63_19800 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D AFK63_19805 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D AFK63_19810 glycerol-3-phosphate transporter K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D AFK63_19815 ugpC; glycerol-3-phosphate transporter ATP-binding subunit K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D AFK63_18485 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AFK63_18480 pstC; phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D AFK63_18475 pstA; phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein D AFK63_18470 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AFK63_04490 histidine ABC transporter substrate-binding protein HisJ K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D AFK63_04505 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein D AFK63_04500 amino acid ABC transporter permease K10016 hisQ; histidine transport system permease protein D AFK63_04510 amino acid transporter K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D AFK63_04495 histidine ABC transporter substrate-binding protein HisJ K10014 hisJ; histidine transport system substrate-binding protein D AFK63_12140 glnH; glutamine ABC transporter substrate-bindnig protein K10036 glnH; glutamine transport system substrate-binding protein D AFK63_12145 glnP; glutamine ABC transporter permease K10037 glnP; glutamine transport system permease protein D AFK63_12150 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D AFK63_11840 arginine ABC transporter substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D AFK63_11825 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein D AFK63_11835 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein D AFK63_11830 arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein D AFK63_11820 arginine ABC transporter ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D AFK63_12815 amino acid transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D AFK63_12825 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D AFK63_12820 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D AFK63_12830 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D AFK63_16810 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D AFK63_16815 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D AFK63_16820 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D AFK63_16825 ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D AFK63_05995 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D AFK63_06005 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D AFK63_06010 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D AFK63_19755 leucine ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AFK63_19770 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D AFK63_19775 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein D AFK63_19780 livG; leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein D AFK63_19785 livF; leucine/isoleucine/valine transporter ATP-binding subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein D AFK63_13195 methionine ABC transporter ATPase K02073 metQ; D-methionine transport system substrate-binding protein D AFK63_13405 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D AFK63_14085 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D AFK63_14470 metQ; DL-methionine transporter substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein D AFK63_13185 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein D AFK63_13415 metal ABC transporter permease K02072 metI; D-methionine transport system permease protein D AFK63_14090 methionine import system permease MetP K02072 metI; D-methionine transport system permease protein D AFK63_14465 DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein D AFK63_13190 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D AFK63_14095 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D AFK63_14460 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein D AFK63_08605 branched-chain amino acid ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D AFK63_08610 urea ABC transporter permease K11960 urtB; urea transport system permease protein D AFK63_08615 amino acid ABC transporter permease K11961 urtC; urea transport system permease protein D AFK63_08620 urea ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D AFK63_08625 urea ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D AFK63_12315 branched-chain amino acid ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D AFK63_08080 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AFK63_07440 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AFK63_11365 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AFK63_07445 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D AFK63_07450 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D AFK63_07455 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein D AFK63_07460 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D AFK63_14265 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AFK63_19450 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AFK63_09115 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AFK63_19455 peptide transporter K12369 dppB; dipeptide transport system permease protein D AFK63_19460 peptide transporter K12370 dppC; dipeptide transport system permease protein D AFK63_19465 dppD; peptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D AFK63_19470 dppF; peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D AFK63_07710 peptide ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D AFK63_07705 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein D AFK63_07700 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein D AFK63_07695 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D AFK63_07690 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D AFK63_12050 glutathione ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D AFK63_12045 glutathione ABC transporter permease K13890 gsiC; glutathione transport system permease protein D AFK63_12040 glutathione ABC transporter permease K13891 gsiD; glutathione transport system permease protein D AFK63_12055 glutathione ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D AFK63_04960 antibiotic ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D AFK63_04955 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein D AFK63_04950 microcin ABC transporter permease K13895 yejE; microcin C transport system permease protein D AFK63_04945 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D AFK63_03905 iron-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D AFK63_03895 iron-enterobactin transporter K23186 fepD; iron-siderophore transport system permease protein D AFK63_03890 iron-enterobactin transporter permease K23187 fepG; iron-siderophore transport system permease protein D AFK63_03885 iron-enterobactin transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D AFK63_14690 iron-hydroxamate transporter substrate-binding subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D AFK63_14685 iron-hydroxamate transporter permease subunit K23228 fhuB; ferric hydroxamate transport system permease protein D AFK63_14695 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D AFK63_14660 vitamin B12-transporter protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein D AFK63_10015 Vitamin B12 import system permease BtuC K06073 btuC; vitamin B12 transport system permease protein D AFK63_10005 vitamin B12-transporter ATPase K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D AFK63_06395 znuA; zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D AFK63_06385 znuB; high-affinity zinc transporter membrane component K09816 znuB; zinc transport system permease protein D AFK63_06390 znuC; zinc ABC transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D AFK63_15425 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein D AFK63_15465 polysialic acid transporter K09688 kpsM; capsular polysaccharide transport system permease protein D AFK63_15460 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D AFK63_10800 outer membrane-specific lipoprotein transporter subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein D AFK63_10810 outer membrane-specific lipoprotein transporter subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein D AFK63_10805 lolD; lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D AFK63_04325 cytochrome C biogenesis protein CcmD K02196 ccmD; heme exporter protein D D AFK63_04320 heme ABC transporter permease K02195 ccmC; heme exporter protein C D AFK63_04315 heme ABC transporter permease K02194 ccmB; heme exporter protein B D AFK63_04310 cytochrome C biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D AFK63_15915 lipopolysaccharide ABC transporter permease K07091 lptF; lipopolysaccharide export system permease protein D AFK63_15910 lipopolysaccharide ABC transporter permease K11720 lptG; lipopolysaccharide export system permease protein D AFK63_16510 sugar ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D AFK63_19730 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D AFK63_19725 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AFK63_11615 lipid transporter ATP-binding/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D AFK63_13480 multidrug ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D AFK63_13475 multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D AFK63_03125 ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D AFK63_11720 amino acid ABC transporter permease K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D AFK63_11715 amino acid ABC transporter permease K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D AFK63_11750 macrolide transporter K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D AFK63_04830 multidrug transporter membrane component/ATP-binding component K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:cmw02060] D AFK63_04065 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D AFK63_04070 PTS sugar transporter K02784 ptsH; phosphocarrier protein HPr D AFK63_13140 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D AFK63_04060 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D AFK63_10880 PTS glucose-specific subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D AFK63_12720 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D AFK63_12240 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_02745 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_03590 PTS glucose transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_09410 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_16165 PTS sucrose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D AFK63_03425 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D AFK63_12220 PTS beta-glucoside transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D AFK63_15700 PTS cellobiose transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D AFK63_01575 PTS maltose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D AFK63_17865 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D AFK63_16940 PTS lactose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D AFK63_01695 molecular chaperone TorD K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D AFK63_16935 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D AFK63_02500 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D AFK63_01705 PTS lactose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D AFK63_09615 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AFK63_02490 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AFK63_15600 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AFK63_01700 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AFK63_06860 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D AFK63_06855 PTS mannose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D AFK63_06850 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D AFK63_16205 PTS galactitol transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D AFK63_16210 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D AFK63_16215 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D AFK63_05015 bifunctional PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D AFK63_05025 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D AFK63_05020 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D AFK63_02555 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D AFK63_16535 phosphohistidinoprotein-hexose phosphotransferase K08485 ptsO; phosphocarrier protein NPr D AFK63_16525 transcriptional regulator K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:cmw03070] D AFK63_02010 hypothetical protein K12340 tolC; outer membrane protein D AFK63_13715 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AFK63_13710 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AFK63_16985 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AFK63_16370 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AFK63_00495 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AFK63_13720 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AFK63_18320 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D AFK63_14950 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AFK63_14955 secretion protein K13301 secM; secretion monitor D AFK63_19720 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D AFK63_19030 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AFK63_03180 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AFK63_17125 preprotein translocase subunit SecA K03116 tatA; sec-independent protein translocase protein TatA D AFK63_17120 preprotein translocase K03117 tatB; sec-independent protein translocase protein TatB D AFK63_17115 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D AFK63_12920 tatE; preprotein translocase subunit SecE K03425 tatE; sec-independent protein translocase protein TatE D AFK63_06610 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D AFK63_17975 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D AFK63_18030 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D AFK63_08900 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D AFK63_14275 Hcp family T6SS protein CtsH1 K11903 hcp; type VI secretion system secreted protein Hcp D AFK63_18135 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D AFK63_19175 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D AFK63_18190 Type VI secretion lipoprotein/VasD K11906 vasD; type VI secretion system protein VasD D AFK63_18175 type VI secretion system protein ImpL K11891 impL; type VI secretion system protein ImpL D AFK63_18180 hypothetical protein K11892 impK; type VI secretion system protein ImpK D AFK63_18085 molecular chaperone K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:cmw02020] D AFK63_13765 phoR; phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AFK63_13770 transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D AFK63_18485 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AFK63_10750 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AFK63_10745 transcriptional regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D AFK63_00070 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AFK63_00065 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D AFK63_04810 hypothetical protein K09475 ompC; outer membrane pore protein C D AFK63_11530 porin K09476 ompF; outer membrane pore protein F D AFK63_19050 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D AFK63_19055 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D AFK63_16115 Modulator protein MzrA K25864 mzrA; modulator protein MzrA D AFK63_09375 sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D AFK63_09360 transcriptional regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D AFK63_14645 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D AFK63_15380 histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D AFK63_15385 transcriptional regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D AFK63_05285 histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D AFK63_05280 transcriptional regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D AFK63_05305 multidrug transporter K07799 mdtA; membrane fusion protein, multidrug efflux system D AFK63_05300 multidrug transporter K07788 mdtB; multidrug efflux pump D AFK63_05295 multidrug transporter K07789 mdtC; multidrug efflux pump D AFK63_05290 transporter K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D AFK63_03840 multidrug transporter K18324 acrD; multidrug efflux pump D AFK63_16415 sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D AFK63_16410 XRE family transcriptional regulator K07771 basR; two-component system, OmpR family, response regulator BasR D AFK63_10430 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AFK63_10425 transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AFK63_06155 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D AFK63_06160 transcriptional regulator K02402 flhC; flagellar transcriptional activator FlhC D AFK63_05920 flagellin K02406 fliC; flagellin D AFK63_11945 flagellin K02406 fliC; flagellin D AFK63_05985 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D AFK63_06165 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AFK63_12645 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D AFK63_12650 transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D AFK63_12630 potassium-transporting ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D AFK63_12635 potassium-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D AFK63_12640 potassium-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit D AFK63_16565 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D AFK63_15370 TorR family transcriptional regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D AFK63_04745 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D AFK63_04740 transcriptional regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D AFK63_04725 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein D AFK63_04730 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D AFK63_04735 tricarboxylic transporter K07795 tctC; putative tricarboxylic transport membrane protein D AFK63_18310 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D AFK63_07500 outer membrane receptor protein K19611 fepA; ferric enterobactin receptor D AFK63_13060 outer membrane receptor protein K19611 fepA; ferric enterobactin receptor D AFK63_01750 histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D AFK63_01745 dpiA; two-component response regulator DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB D AFK63_01765 citrate (pro-3S)-lyase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22] D AFK63_01770 citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D AFK63_01775 citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D AFK63_01780 citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D AFK63_01785 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase K05964 citX; holo-ACP synthase [EC:2.7.7.61] D AFK63_01790 2-(5'-triphosphoribosyl)-3'-dephospho CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D AFK63_06105 C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D AFK63_14160 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D AFK63_07325 nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D AFK63_07320 transcriptional regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D AFK63_03845 transcriptional regulator NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D AFK63_07335 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D AFK63_07340 narH; nitrate reductase K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D AFK63_07350 narI; nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D AFK63_07345 nitrate reductase K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D AFK63_01110 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AFK63_01105 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AFK63_01100 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C D AFK63_01095 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D D AFK63_14475 rcsF; colanic acid biosynthesis protein RcsF K06080 rcsF; RcsF protein D AFK63_04795 histidine kinase K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D AFK63_04805 phosphotransfer intermediate protein in two-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D AFK63_05800 colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D AFK63_04800 transcriptional regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D AFK63_02710 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D AFK63_06025 sirA; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D AFK63_06015 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D AFK63_02960 carbon storage regulator K03563 csrA; carbon storage regulator D AFK63_08985 ampC; D-alanyl-D-alanine carboxypeptidase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D AFK63_06205 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AFK63_06190 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AFK63_06185 polyketide synthase K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AFK63_06195 sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein D AFK63_12195 fimbrial assembly protein K07347 fimD; outer membrane usher protein D AFK63_11190 hypothetical protein K07347 fimD; outer membrane usher protein D AFK63_06200 fimbrial assembly protein K07347 fimD; outer membrane usher protein D AFK63_14630 protein-PII uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D AFK63_03460 transcriptional regulator K04751 glnB; nitrogen regulatory protein P-II 1 D AFK63_18705 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AFK63_18700 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D AFK63_18710 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AFK63_02410 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AFK63_19525 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D AFK63_16515 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D AFK63_03445 histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D AFK63_03455 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D AFK63_06220 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AFK63_01250 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_17570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_13395 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_05225 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_10725 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_02910 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_07270 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_08685 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D AFK63_15665 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D AFK63_01310 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D AFK63_01470 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D AFK63_01855 methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D AFK63_16025 chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D AFK63_06210 chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D AFK63_09040 hypothetical protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D AFK63_08325 chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D AFK63_09150 methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D AFK63_16030 aerotaxis receptor Aer K03776 aer; aerotaxis receptor D AFK63_06180 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AFK63_06175 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AFK63_06230 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AFK63_06225 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AFK63_10325 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AFK63_12830 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D AFK63_12825 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D AFK63_12820 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D AFK63_12815 amino acid transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D AFK63_00250 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AFK63_07665 enoyl-CoA hydratase K13816 rpfF; DSF synthase D AFK63_08690 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D AFK63_12520 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D AFK63_09245 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D AFK63_13955 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D AFK63_12515 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D AFK63_09250 ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D AFK63_13960 cytochrome D oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D AFK63_02010 hypothetical protein K12340 tolC; outer membrane protein D AFK63_05355 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D AFK63_05360 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D AFK63_05365 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D AFK63_17370 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D AFK63_17365 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D AFK63_12355 acyl-CoA thioesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D AFK63_09135 acyl-CoA thioesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D AFK63_11040 Negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D AFK63_12655 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AFK63_01740 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cmw02024] D AFK63_03005 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D AFK63_01185 hfq; RNA-binding protein K03666 hfq; host factor-I protein D AFK63_07550 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AFK63_03215 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AFK63_12420 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AFK63_09980 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AFK63_03445 histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D AFK63_03455 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D AFK63_06155 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D AFK63_06160 transcriptional regulator K02402 flhC; flagellar transcriptional activator FlhC D AFK63_12650 transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D AFK63_06015 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D AFK63_06620 conjugal transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D AFK63_06625 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC D AFK63_06630 conjugal transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD D AFK63_06635 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D AFK63_03690 conjugal transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D AFK63_06640 conjugal transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D AFK63_06650 conjugal transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D AFK63_06655 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D AFK63_06660 conjugal transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D AFK63_06665 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI D AFK63_09235 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AFK63_09220 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AFK63_07135 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AFK63_09225 spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D AFK63_07130 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D AFK63_09230 spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D AFK63_19755 leucine ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AFK63_19770 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D AFK63_19775 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein D AFK63_19780 livG; leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein D AFK63_19785 livF; leucine/isoleucine/valine transporter ATP-binding subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein D AFK63_05800 colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D AFK63_07665 enoyl-CoA hydratase K13816 rpfF; DSF synthase D AFK63_07670 RNase II stability modulator K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52] D AFK63_03115 hypothetical protein K20276 bapA; large repetitive protein D AFK63_17295 hypothetical protein K20276 bapA; large repetitive protein D AFK63_06955 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AFK63_05970 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AFK63_00250 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AFK63_00800 zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D AFK63_07605 ribA; GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D AFK63_13690 ribD; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D AFK63_09100 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AFK63_14060 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AFK63_14065 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AFK63_08240 transporter K18139 oprM; outer membrane protein, multidrug efflux system D AFK63_06535 OprM K18139 oprM; outer membrane protein, multidrug efflux system D AFK63_08080 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AFK63_07440 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AFK63_11365 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AFK63_07445 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D AFK63_07450 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D AFK63_07455 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein D AFK63_07460 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D AFK63_09280 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AFK63_09055 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AFK63_09285 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AFK63_09065 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AFK63_09290 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AFK63_09060 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AFK63_09295 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AFK63_18320 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D AFK63_16985 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AFK63_16370 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AFK63_00495 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AFK63_13720 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AFK63_14950 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AFK63_19720 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D AFK63_19030 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AFK63_03180 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:cmw02030] D AFK63_01250 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_17570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_13395 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_05225 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_10725 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_02910 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_07270 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_08685 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D AFK63_15665 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D AFK63_01310 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D AFK63_01470 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D AFK63_01855 methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D AFK63_16025 chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D AFK63_06210 chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D AFK63_09040 hypothetical protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D AFK63_08325 chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D AFK63_09150 methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D AFK63_16030 aerotaxis receptor Aer K03776 aer; aerotaxis receptor D AFK63_00745 malE; sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein D AFK63_18605 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein D AFK63_05080 sugar ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D AFK63_14265 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AFK63_19450 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AFK63_09115 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AFK63_06175 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AFK63_06180 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AFK63_06230 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AFK63_06235 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ D AFK63_06225 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AFK63_10325 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AFK63_06220 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AFK63_05860 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D AFK63_05830 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AFK63_05825 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AFK63_06165 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AFK63_06170 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:cmw02040] D AFK63_05870 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D AFK63_05865 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AFK63_05860 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D AFK63_05855 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D AFK63_05850 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AFK63_05845 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ D AFK63_05840 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D AFK63_05835 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D AFK63_05830 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AFK63_05825 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AFK63_05820 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D AFK63_05815 fliP; flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AFK63_05810 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AFK63_05805 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AFK63_06260 flagellar protein flhE K03516 flhE; flagellar protein FlhE D AFK63_06255 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AFK63_06250 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D AFK63_11035 flagellar biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D AFK63_11030 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D AFK63_11025 flgC; flagellar biosynthesis protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D AFK63_11020 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D AFK63_11015 flgE; flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE D AFK63_11010 flgF; flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D AFK63_11005 flgG; flagellar biosynthesis protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D AFK63_11000 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D AFK63_10995 flgI; flagellar biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI D AFK63_10990 flgJ; flagellar biosynthesis protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D AFK63_10985 flgK; flagellar biosynthesis protein FlgK K02396 flgK; flagellar hook-associated protein 1 D AFK63_10980 flgL; flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D AFK63_05920 flagellin K02406 fliC; flagellin D AFK63_11945 flagellin K02406 fliC; flagellin D AFK63_05915 flagellar cap protein FliD K02407 fliD; flagellar hook-associated protein 2 D AFK63_05910 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D AFK63_05905 flagellar biosynthesis protein FliT K02423 fliT; flagellar protein FliT D AFK63_06165 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AFK63_06170 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D AFK63_11040 Negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM D AFK63_11045 flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D AFK63_05995 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D AFK63_05990 flagella biosynthesis protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D AFK63_01920 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor D AFK63_06155 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D AFK63_06160 transcriptional regulator K02402 flhC; flagellar transcriptional activator FlhC D AFK63_16515 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D AFK63_05985 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D AFK63_02735 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D AFK63_00650 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cmw01501] D AFK63_11530 porin K09476 ompF; outer membrane pore protein F D AFK63_04810 hypothetical protein K09475 ompC; outer membrane pore protein C D AFK63_13585 ampG; muropeptide transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D AFK63_10850 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AFK63_08985 ampC; D-alanyl-D-alanine carboxypeptidase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D AFK63_08080 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AFK63_07440 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AFK63_11365 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AFK63_07445 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D AFK63_07450 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D AFK63_07455 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein D AFK63_07460 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D AFK63_13355 multidrug transporter K03585 acrA; membrane fusion protein, multidrug efflux system D AFK63_13360 multidrug transporter K18138 acrB; multidrug efflux pump D AFK63_08240 transporter K18139 oprM; outer membrane protein, multidrug efflux system D AFK63_06535 OprM K18139 oprM; outer membrane protein, multidrug efflux system D AFK63_02010 hypothetical protein K12340 tolC; outer membrane protein D AFK63_00110 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AFK63_12880 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AFK63_15020 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cmw01502] D AFK63_13860 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AFK63_14980 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AFK63_00835 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AFK63_07025 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AFK63_15010 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D AFK63_15005 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AFK63_14990 murG; UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cmw01503] D AFK63_10750 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AFK63_10745 transcriptional regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D AFK63_19435 phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D AFK63_12940 Lipid A palmitoyltransferase PagP K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D AFK63_16415 sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D AFK63_16410 XRE family transcriptional regulator K07771 basR; two-component system, OmpR family, response regulator BasR D AFK63_09555 hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D AFK63_07710 peptide ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D AFK63_07705 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein D AFK63_07700 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein D AFK63_07695 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D AFK63_07690 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D AFK63_14490 copper homeostasis protein K06079 cutF; copper homeostasis protein (lipoprotein) D AFK63_19050 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D AFK63_19055 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D AFK63_04000 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AFK63_02610 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AFK63_01170 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AFK63_10820 peptigoglycan-binding protein LysM K19236 ycfS; L,D-transpeptidase YcfS D AFK63_14645 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D AFK63_18670 protein disulfide isomerase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D AFK63_00225 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D AFK63_08645 transcriptional regulator K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D AFK63_13355 multidrug transporter K03585 acrA; membrane fusion protein, multidrug efflux system D AFK63_13360 multidrug transporter K18138 acrB; multidrug efflux pump D AFK63_02010 hypothetical protein K12340 tolC; outer membrane protein D AFK63_14560 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cmw01000] C 01001 Protein kinases [BR:cmw01001] D AFK63_08790 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D AFK63_05365 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D AFK63_13765 phoR; phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AFK63_10750 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AFK63_00070 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AFK63_09375 sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D AFK63_19050 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D AFK63_15380 histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D AFK63_05285 histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D AFK63_16415 sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D AFK63_10430 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AFK63_12645 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D AFK63_16565 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D AFK63_04745 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D AFK63_19105 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D AFK63_07325 nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D AFK63_04805 phosphotransfer intermediate protein in two-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D AFK63_04795 histidine kinase K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D AFK63_02710 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D AFK63_01750 histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D AFK63_04190 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D AFK63_05215 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D AFK63_18705 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AFK63_03445 histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D AFK63_06175 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cmw01009] D AFK63_19070 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AFK63_13310 heat-shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D AFK63_00955 histidine kinase K04079 HSP90A; molecular chaperone HtpG D AFK63_18115 PppA K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D AFK63_15490 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:cmw01002] D AFK63_15250 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D AFK63_00385 peptidase A24 K02506 hofD; leader peptidase HopD [EC:3.4.23.43] D AFK63_09785 hycI; hydrogenase 3 maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51] D AFK63_03670 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AFK63_04885 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AFK63_09870 gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94] D AFK63_05570 gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94] D AFK63_04970 spr; lipoprotein Spr K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D AFK63_19650 hypothetical protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D AFK63_09585 endopeptidase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D AFK63_08825 lipoprotein nlpC K13695 nlpC; probable lipoprotein NlpC D AFK63_10000 endopeptidase K13695 nlpC; probable lipoprotein NlpC D AFK63_04480 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D AFK63_16580 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AFK63_18495 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AFK63_12745 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AFK63_16265 general stress protein K05520 yhbO; deglycase [EC:3.5.1.124] D AFK63_13640 oxidative-stress-resistance chaperone K03152 thiJ; protein deglycase [EC:3.5.1.124] D AFK63_09910 peptigoglycan-binding protein LysM K19234 ynhG; L,D-transpeptidase YnhG D AFK63_12090 L,D-transpeptidase K19235 ybiS; L,D-transpeptidase YbiS D AFK63_10820 peptigoglycan-binding protein LysM K19236 ycfS; L,D-transpeptidase YcfS D AFK63_11550 murein L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB D AFK63_04290 CAAX protease K07052 K07052; CAAX protease family protein D AFK63_19110 CAAX protease K07052 K07052; CAAX protease family protein D AFK63_11515 pepN; aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D AFK63_19600 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D AFK63_08560 dipeptidyl carboxypeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D AFK63_02590 protease K01407 ptrA; protease III [EC:3.4.24.55] D AFK63_15920 aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AFK63_03555 aminopeptidase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D AFK63_14235 peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AFK63_03825 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AFK63_14270 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D AFK63_10760 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D AFK63_14335 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D AFK63_06400 peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D AFK63_14625 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D AFK63_17070 proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D AFK63_02285 prolyl aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D AFK63_02785 alkaline phosphatase K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-] D AFK63_08430 peptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D AFK63_16385 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D AFK63_06800 heat-shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D AFK63_11640 metalloprotease K07387 K07387; metalloprotease [EC:3.4.24.-] D AFK63_02210 metalloprotease K07387 K07387; metalloprotease [EC:3.4.24.-] D AFK63_03770 hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D AFK63_14585 zinc metallopeptidase RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D AFK63_04400 mepA; murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D AFK63_05690 DgsA anti-repressor MtfA K09933 mtfA; MtfA peptidase D AFK63_08425 serine protease K04775 ydgD; protease YdgD [EC:3.4.21.-] D AFK63_14645 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D AFK63_16625 serine endoprotease DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-] D AFK63_16630 serine endoprotease K04691 hhoB; serine protease DegS [EC:3.4.21.-] D AFK63_06725 protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D AFK63_11975 peptidase M15 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AFK63_12895 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AFK63_05595 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AFK63_05145 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D AFK63_13890 beta-lactam-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D AFK63_16405 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D AFK63_13565 hypothetical protein K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D AFK63_13555 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D AFK63_11440 Lon protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-] D AFK63_00785 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D AFK63_10640 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D AFK63_08395 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D AFK63_10455 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D AFK63_03380 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D AFK63_06795 carboxy-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D AFK63_10235 protease 4 K04773 sppA; protease IV [EC:3.4.21.-] D AFK63_07580 peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-] D AFK63_19920 rhomboid intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D AFK63_07080 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D AFK63_07880 peptidase K06904 GP4; Escherichia/Staphylococcus phage prohead protease D AFK63_17630 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D AFK63_19830 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AFK63_05275 protease K08303 prtC; U32 family peptidase [EC:3.4.-.-] D AFK63_08390 protease K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D AFK63_16295 protease K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D AFK63_16290 protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D AFK63_01495 pmbA; peptidase PmbA K03592 pmbA; PmbA protein D AFK63_16685 tldD; protease TldD K03568 tldD; TldD protein D AFK63_10070 ecotin K08276 eco; ecotin D AFK63_03595 hypothetical protein K06894 yfhM; alpha-2-macroglobulin D AFK63_01200 cell division protein FtsH K04087 hflC; modulator of FtsH protease HflC D AFK63_01195 cell division protein FtsH K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:cmw01003] D AFK63_19890 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D AFK63_19500 bcsA; cellulose synthase K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D AFK63_16555 mtgA; peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D AFK63_03600 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D AFK63_14705 mrcB; bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D AFK63_00110 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AFK63_05390 colanic acid biosynthesis glycosyl transferase K13683 wcaE; putative colanic acid biosynthesis glycosyltransferase WcaE [EC:2.4.-.-] D AFK63_05380 glycosyl transferase K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D AFK63_17325 UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D AFK63_17335 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D AFK63_17380 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D AFK63_11135 glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D AFK63_01880 Zeaxanthin glucosyltransferase K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276] D AFK63_06145 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D AFK63_19640 alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D AFK63_05445 colanic acid biosynthesis protein K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cmw01005] D AFK63_14560 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D AFK63_14555 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D AFK63_14960 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D AFK63_14570 lpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D AFK63_13160 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D AFK63_11610 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D AFK63_11120 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AFK63_06405 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D AFK63_13990 lipid A biosynthesis palmitoleoyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D AFK63_04975 hypothetical protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D AFK63_06560 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D AFK63_18930 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D AFK63_12940 Lipid A palmitoyltransferase PagP K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D AFK63_09555 hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D AFK63_19435 phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D AFK63_07245 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D AFK63_11595 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AFK63_16495 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D AFK63_16490 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D AFK63_18960 ADP-heptose--LPS heptosyltransferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D AFK63_18925 lipopolysaccharide biosynthesis protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-] D AFK63_18965 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D AFK63_18950 glycosyl transferase family 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D AFK63_18940 glycosyl transferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D AFK63_18990 polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D AFK63_18955 heptosyltransferase K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D AFK63_14355 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D AFK63_14455 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D AFK63_01975 heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D AFK63_18970 rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D AFK63_17330 hypothetical protein K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27] D AFK63_05520 chain length determination protein K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator) D AFK63_17380 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cmw01011] D AFK63_16450 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AFK63_17025 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AFK63_14985 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D AFK63_15000 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AFK63_15015 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AFK63_13860 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AFK63_14980 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AFK63_00835 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AFK63_07025 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AFK63_17500 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D AFK63_07080 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D AFK63_15005 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AFK63_14990 murG; UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AFK63_01950 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AFK63_11965 UDP pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D AFK63_11050 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D AFK63_00110 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AFK63_14705 mrcB; bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D AFK63_03600 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D AFK63_12880 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AFK63_15020 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AFK63_11975 peptidase M15 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AFK63_12895 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AFK63_05595 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AFK63_16405 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D AFK63_13890 beta-lactam-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D AFK63_05145 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D AFK63_16555 mtgA; peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D AFK63_09910 peptigoglycan-binding protein LysM K19234 ynhG; L,D-transpeptidase YnhG D AFK63_12090 L,D-transpeptidase K19235 ybiS; L,D-transpeptidase YbiS D AFK63_10820 peptigoglycan-binding protein LysM K19236 ycfS; L,D-transpeptidase YcfS D AFK63_11550 murein L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB D AFK63_04400 mepA; murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D AFK63_09585 endopeptidase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D AFK63_04970 spr; lipoprotein Spr K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D AFK63_19650 hypothetical protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D AFK63_06400 peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D AFK63_15415 lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D AFK63_02625 mltA; murein transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D AFK63_02935 murein hydrolase effector LrgB K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D AFK63_01795 mltC; murein transglycosylase K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D AFK63_14395 mltD; lytic murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D AFK63_07085 lytic murein transglycosylase K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29] D AFK63_03435 lytic murein transglycosylase K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D AFK63_10900 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D AFK63_12890 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D AFK63_04000 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AFK63_02610 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AFK63_01170 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AFK63_11805 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AFK63_14900 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] D AFK63_09905 murein lipoprotein K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:cmw01004] D AFK63_10925 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AFK63_06895 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AFK63_10930 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AFK63_04425 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AFK63_10910 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AFK63_05950 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AFK63_05955 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AFK63_10920 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AFK63_11445 3-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D AFK63_14565 hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AFK63_07685 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D AFK63_13210 acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D AFK63_13460 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D AFK63_07495 acyl-CoA esterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D AFK63_13535 thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-] D AFK63_06925 linoleoyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3] D AFK63_06930 linoleoyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3] D AFK63_00935 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AFK63_06955 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AFK63_05970 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AFK63_00775 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D AFK63_10935 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D AFK63_01940 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AFK63_02105 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:cmw01008] D AFK63_03920 isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D AFK63_13065 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D AFK63_03915 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D AFK63_13045 entF; enterobactin synthase subunit F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D AFK63_03930 thioesterase K24147 entH; proofreading thioesterase EntH C 01006 Prenyltransferases [BR:cmw01006] D AFK63_13655 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D AFK63_01890 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D AFK63_16440 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D AFK63_14595 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AFK63_01865 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D AFK63_01180 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D AFK63_17640 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D AFK63_00770 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D AFK63_13620 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:cmw01007] D AFK63_04125 gltX; glutamine--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AFK63_12710 glutamate--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D AFK63_14730 glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D AFK63_09495 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AFK63_00170 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D AFK63_13150 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AFK63_06280 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AFK63_05190 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AFK63_18410 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AFK63_15255 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AFK63_15930 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AFK63_12850 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AFK63_02380 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AFK63_11525 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D AFK63_03625 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AFK63_19320 glycyl-tRNA synthetase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AFK63_19325 hypothetical protein K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AFK63_11685 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AFK63_14485 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AFK63_10050 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AFK63_02955 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AFK63_15225 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AFK63_10030 phenylalanyl-tRNA synthetase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AFK63_10025 pheT; phenylalanine--tRNA ligase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AFK63_11535 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AFK63_19255 avtA; valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D AFK63_04600 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D AFK63_04200 glutamate-pyruvate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D AFK63_00840 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D AFK63_13025 methionine aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D AFK63_05550 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AFK63_18975 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D AFK63_12330 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D AFK63_09415 transcriptional regulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AFK63_06300 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AFK63_00240 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AFK63_10200 acetylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D AFK63_05575 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AFK63_19745 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D AFK63_18350 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D AFK63_16040 putrescine--2-oxoglutarate aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D AFK63_12340 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D AFK63_14680 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AFK63_17435 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AFK63_11650 phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AFK63_17345 TDP-4-oxo-6-deoxy-D-glucose aminotransferase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:cmw00194] D AFK63_18505 atpC; ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D AFK63_18510 ATP synthase F0F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D AFK63_18515 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D AFK63_18520 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D AFK63_18525 ATP F0F1 synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D AFK63_18530 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AFK63_18535 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D AFK63_18540 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AFK63_18545 ATP F0F1 synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cmw03000] D AFK63_05755 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AFK63_10645 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AFK63_15110 transcriptional regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D AFK63_17700 transcriptional regulator K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR D AFK63_17705 AraC family transcriptional regulator K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS D AFK63_00895 transcriptional regulator K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator D AFK63_08645 transcriptional regulator K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D AFK63_15395 transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D AFK63_04555 transcriptional regulator K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator D AFK63_08955 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D AFK63_07060 AraC family transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT D AFK63_04820 6-O-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D AFK63_02650 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AFK63_17420 transcriptional regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D AFK63_17170 hypothetical protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D AFK63_15270 nhaR; transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D AFK63_17530 transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D AFK63_02255 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D AFK63_15055 leuO; transcriptional regulator K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon D AFK63_07595 cysB; CysB family transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D AFK63_05675 cbl; transcriptional regulator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D AFK63_02080 LysR family transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator D AFK63_05670 nitrogen assimilation transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D AFK63_16680 transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D AFK63_17460 transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D AFK63_11970 DeoR faimly transcriptional regulator K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D AFK63_19925 transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D AFK63_16225 transcriptional regulator K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor D AFK63_01655 DeoR faimly transcriptional regulator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator D AFK63_18755 DeoR faimly transcriptional regulator K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor D AFK63_15725 lacI; lac repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor D AFK63_14175 LacI family transcriptional regulator K27069 lacI; LacI family transcriptional regulator, lactose operon repressor D AFK63_17765 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AFK63_05075 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AFK63_14015 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AFK63_18615 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AFK63_19270 XylR family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AFK63_02515 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AFK63_19390 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D AFK63_17620 transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D AFK63_15040 transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D AFK63_16175 transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D AFK63_01580 treR; trehalose repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor D AFK63_15705 transcriptional regulator K03487 ascG; LacI family transcriptional regulator, asc operon repressor D AFK63_09595 transcriptional regulator K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D AFK63_19850 transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D AFK63_13145 LacI family transcriptional regulator K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein D AFK63_09405 transcriptional regulator K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein D AFK63_00175 transcriptional regulator K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator D AFK63_12245 GntR family transcriptional regulator K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor D AFK63_07010 fatty acid metabolism regulator K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D AFK63_14875 pdhR; transcriptional regulator PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D AFK63_02505 transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D AFK63_16105 transcriptional regulator K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor D AFK63_17675 transcriptional regulator K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator D AFK63_18285 transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor D AFK63_07140 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D AFK63_19740 decarboxylase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D AFK63_09050 GntR family transcriptional regulator K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator D AFK63_08550 GntR family transcriptional regulator K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor D AFK63_09700 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D AFK63_13350 transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D AFK63_18885 slmA; division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator D AFK63_11265 transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D AFK63_09560 transcriptional repressor NemR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D AFK63_07070 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D AFK63_16790 transcriptional regulator K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor D AFK63_10830 TetR family transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor D AFK63_17520 transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D AFK63_11935 DeoR faimly transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response D AFK63_18565 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D AFK63_11705 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AFK63_11590 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AFK63_13485 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D AFK63_06015 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D AFK63_05800 colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D AFK63_15610 transcriptional regulator K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides D AFK63_19930 transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D AFK63_08650 transcriptional regulator K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR D AFK63_08255 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D AFK63_09520 transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D AFK63_15720 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D AFK63_03025 transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D AFK63_02870 transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility D AFK63_15630 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D AFK63_13245 transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D AFK63_08820 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D AFK63_00530 zntR; zinc-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D AFK63_00900 transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D AFK63_05185 transcriptional regulator K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes D AFK63_08565 transcriptional regulator, MerR family protein K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes D AFK63_12690 fur; ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D AFK63_00800 zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D AFK63_00645 transcriptional repressor IclR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D AFK63_06805 transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D AFK63_00250 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AFK63_09325 transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D AFK63_03515 transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D AFK63_01215 transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D AFK63_07980 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D AFK63_08385 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D AFK63_12115 manganese transport regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D AFK63_06680 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D AFK63_02740 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D AFK63_17020 biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D AFK63_16780 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AFK63_15410 transcriptional regulator K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D AFK63_16445 transcriptional regulator K07724 ner; Ner family transcriptional regulator D AFK63_15085 transcriptional regulator SgrR K11925 sgrR; SgrR family transcriptional regulator D AFK63_15480 transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D AFK63_09875 transcriptional regulator K14056 puuR; HTH-type transcriptional regulator, repressor for puuD D AFK63_07785 transcriptional regulator K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D AFK63_08165 AAA family ATPase K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D AFK63_04840 transcriptional regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator D AFK63_09855 transcriptional regulator K15836 fhlA; formate hydrogenlyase transcriptional activator D AFK63_13300 XRE family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D AFK63_12385 transcriptional regulator K02019 modE; molybdate transport system regulatory protein D AFK63_19330 transcriptional regulator K07726 K07726; putative transcriptional regulator D AFK63_17605 transcriptional repressor protein MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D AFK63_11260 putA; transcriptional regulator K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AFK63_12215 transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator D AFK63_08315 hypothetical protein K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D AFK63_13575 transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D AFK63_06435 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AFK63_17100 rfaH; transcriptional regulator K05785 rfaH; transcriptional antiterminator RfaH D AFK63_16640 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D AFK63_15990 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism D AFK63_12735 transcriptional regulator K02565 nagC; N-acetylglucosamine repressor D AFK63_08445 transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene D AFK63_17875 mtlR; mannitol repressor protein K02562 mtlR; mannitol operon repressor D AFK63_08060 transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D AFK63_03785 gcvR; glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D AFK63_07715 pspF; phage-shock protein K03974 pspF; psp operon transcriptional activator D AFK63_07730 transcriptional regulator K03973 pspC; phage shock protein C D AFK63_12995 transcription elongation factor GreAB K06140 rnk; regulator of nucleoside diphosphate kinase D AFK63_03685 transcriptional regulator K07733 alpA; prophage regulatory protein D AFK63_19210 hypothetical protein K07733 alpA; prophage regulatory protein D AFK63_02160 hypothetical protein K07735 algH; putative transcriptional regulator D AFK63_14725 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor D AFK63_13695 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D AFK63_14320 hypothetical protein K11926 crl; sigma factor-binding protein Crl D AFK63_00670 transcriptional regulator K14414 rtcR; transcriptional regulatory protein RtcR D AFK63_07790 transcriptional regulator K22302 dicC; transcriptional repressor of cell division inhibition gene dicB D AFK63_15035 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:cmw03021] D AFK63_00515 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AFK63_16955 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AFK63_16950 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AFK63_18850 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D AFK63_01920 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor D AFK63_02850 RNA polymerase subunit sigma K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D AFK63_03355 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AFK63_19735 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D AFK63_16515 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D AFK63_05985 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D AFK63_15135 ATP-dependent helicase K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D AFK63_16350 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D AFK63_13680 nusB; transcription antiterminator NusB K03625 nusB; transcription antitermination protein NusB D AFK63_16980 nusG; transcription antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG D AFK63_16600 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D AFK63_16595 Clp protease ClpP K03600 sspB; stringent starvation protein B D AFK63_08780 response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D AFK63_08785 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist D AFK63_08790 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D AFK63_03360 anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA D AFK63_03365 rseB; anti-sigma E factor K03598 rseB; sigma-E factor negative regulatory protein RseB D AFK63_03370 SoxR reducing system protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC D AFK63_14725 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor D AFK63_16400 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D AFK63_00060 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D AFK63_17385 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D AFK63_14510 Rho-binding antiterminator K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:cmw03019] D AFK63_10965 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D AFK63_16695 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D AFK63_03385 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D AFK63_01220 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AFK63_01135 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D AFK63_17395 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D AFK63_12250 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D AFK63_16315 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AFK63_17200 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AFK63_02735 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AFK63_16325 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AFK63_17385 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D AFK63_19070 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AFK63_15310 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AFK63_01055 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AFK63_01185 hfq; RNA-binding protein K03666 hfq; host factor-I protein D AFK63_03735 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AFK63_14735 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D AFK63_02550 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D AFK63_02960 carbon storage regulator K03563 csrA; carbon storage regulator D AFK63_16720 transcriptional regulator K18765 csrD; RNase E specificity factor CsrD D AFK63_17645 ribonuclease activity regulator protein RraA K02553 rraA; regulator of ribonuclease activity A D AFK63_15955 RNase E inhibitor protein K09893 rraB; regulator of ribonuclease activity B D AFK63_16530 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ D AFK63_08230 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D AFK63_14710 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:cmw03011] D AFK63_11630 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D AFK63_14620 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D AFK63_00425 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D AFK63_00510 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D AFK63_00480 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D AFK63_01270 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D AFK63_00360 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D AFK63_00465 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D AFK63_16605 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D AFK63_00390 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D AFK63_00505 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D AFK63_00355 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D AFK63_00500 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D AFK63_00460 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D AFK63_16330 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D AFK63_03185 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D AFK63_00440 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D AFK63_01280 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D AFK63_00415 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D AFK63_15265 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D AFK63_01930 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D AFK63_16970 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D AFK63_00410 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D AFK63_00395 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D AFK63_00400 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D AFK63_00455 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D AFK63_00470 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D AFK63_01285 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D AFK63_16965 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D AFK63_16975 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D AFK63_16960 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D AFK63_16610 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D AFK63_00445 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D AFK63_00490 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D AFK63_00430 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D AFK63_00520 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D AFK63_00475 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D AFK63_03200 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D AFK63_10035 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D AFK63_16435 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D AFK63_00420 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D AFK63_00405 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D AFK63_00450 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D AFK63_16430 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D AFK63_18905 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D AFK63_00435 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D AFK63_00485 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D AFK63_17610 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AFK63_13390 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AFK63_10940 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D AFK63_18910 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D AFK63_10040 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D AFK63_13385 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D AFK63_04920 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D AFK63_00620 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_17030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_14430 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_16830 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_18645 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_16840 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_17475 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_03280 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_00605 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_18630 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_16855 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_03265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_14450 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_17050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_17495 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_17035 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_17480 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_14435 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_16845 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_00615 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_03275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_18640 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cmw03009] D AFK63_03385 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D AFK63_01135 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D AFK63_03390 GTP-binding protein Era K03595 era; GTPase D AFK63_16420 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D AFK63_14725 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor D AFK63_16350 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D AFK63_13680 nusB; transcription antiterminator NusB K03625 nusB; transcription antitermination protein NusB D AFK63_16980 nusG; transcription antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG D AFK63_04930 16S rRNA pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D AFK63_15165 ksgA; 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D AFK63_00550 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D AFK63_15565 rsmC; 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D AFK63_19715 rsmD; 16S rRNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D AFK63_02170 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D AFK63_06770 yebU; RNA methyltransferase RsmF K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178] D AFK63_18550 gidB; 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AFK63_15030 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D AFK63_16230 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D AFK63_19605 methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D AFK63_06835 rrmA; 23S rRNA methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D AFK63_01225 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D AFK63_16390 rrmJ; 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D AFK63_12160 23S rRNA methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D AFK63_16055 23S rRNA methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D AFK63_12875 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D AFK63_11385 23S rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D AFK63_19595 rRNA methyltransferase K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D AFK63_11470 rlmL; 23S rRNA methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D AFK63_02660 23S rRNA methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D AFK63_03610 23S rRNA (adenine(2503)-C2)-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D AFK63_02715 rumA; 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D AFK63_11865 rumB; 23S rRNA methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D AFK63_15140 23S rRNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AFK63_07565 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D AFK63_10960 23S rRNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D AFK63_03250 rluD; 23S rRNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D AFK63_10715 23S rRNA pseudouridylate synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D AFK63_03325 methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D AFK63_15555 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D AFK63_11065 ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D AFK63_11900 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D AFK63_08360 ribosomal-protein-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D AFK63_03190 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D AFK63_12035 rimO; ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D AFK63_11660 ribosomal protein S12 methylthiotransferase accessory factor YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D AFK63_16765 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D AFK63_04390 SAM-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D AFK63_10755 50S ribosomal protein L16 arginine hydroxylase K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D AFK63_10965 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D AFK63_16695 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D AFK63_02155 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D AFK63_16315 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AFK63_03340 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D AFK63_01130 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D AFK63_03640 GTP-binding protein Der K03977 engA; GTPase D AFK63_01190 GTPase HflX K03665 hflX; GTPase D AFK63_00580 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AFK63_18845 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D AFK63_16340 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D AFK63_16355 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP D AFK63_13135 ribosome-associated protein K14761 rlbA; ribosome-associated protein D AFK63_12870 ribosome-associated protein K09710 ybeB; ribosome-associated protein D AFK63_12800 metal-binding protein K07042 ybeY; probable rRNA maturation factor D AFK63_16395 RNA-binding protein K07574 yhbY; RNA-binding protein D AFK63_17665 hypothetical protein K14762 yibL; ribosome-associated protein D AFK63_01490 hypothetical protein K09889 yjgA; ribosome-associated protein D AFK63_16520 hypothetical protein K05808 hpf; ribosome hibernation promoting factor D AFK63_03235 translation inhibitor protein RaiA K05809 raiA; ribosome-associated inhibitor A D AFK63_07180 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase D AFK63_10945 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cmw03016] D AFK63_04675 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D AFK63_01955 tRNA nucleotidyl transferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D AFK63_00680 RNA ligase K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D AFK63_04125 gltX; glutamine--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AFK63_14485 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AFK63_15255 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AFK63_12850 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AFK63_05190 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AFK63_18410 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AFK63_12710 glutamate--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D AFK63_06280 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AFK63_02380 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AFK63_02955 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AFK63_15225 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AFK63_11525 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D AFK63_10050 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AFK63_11685 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AFK63_13150 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AFK63_15930 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AFK63_03625 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AFK63_10030 phenylalanyl-tRNA synthetase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AFK63_10025 pheT; phenylalanine--tRNA ligase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AFK63_09495 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AFK63_00170 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D AFK63_18770 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D AFK63_10870 purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AFK63_01810 trmB; tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D AFK63_14480 tRNA (adenine(37)-N6)-methyltransferase K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D AFK63_04450 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D AFK63_16335 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D AFK63_02830 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D AFK63_03520 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AFK63_00580 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AFK63_01180 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D AFK63_18325 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D AFK63_18555 hypothetical protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D AFK63_10225 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D AFK63_01350 adenosine-3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D AFK63_18315 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D AFK63_19940 bacterial RNase P K01978 rnpB; M1 RNA D AFK63_09575 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D AFK63_18875 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D AFK63_12950 ribonuclease I K01169 rna; ribonuclease I (enterobacter ribonuclease) [EC:4.6.1.21] D AFK63_07675 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D AFK63_06960 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D AFK63_14715 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D AFK63_15420 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA D AFK63_19320 glycyl-tRNA synthetase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AFK63_19325 hypothetical protein K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AFK63_14730 glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D AFK63_13260 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D AFK63_10290 hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D AFK63_00815 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D AFK63_16775 tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D AFK63_05115 tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D AFK63_12790 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D AFK63_06335 tRNA methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D AFK63_06330 tRNA methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D AFK63_11570 SAM-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D AFK63_15365 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D AFK63_17510 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D AFK63_03195 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D AFK63_03325 methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D AFK63_18840 tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D AFK63_03510 tRNA (cytidine/uridine-2'-O-)-methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D AFK63_19045 rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D AFK63_03345 tRNA (adenine-N6)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D AFK63_02700 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D AFK63_15140 23S rRNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AFK63_10730 mnmA; tRNA 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D AFK63_08145 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D AFK63_19675 sulfur transfer protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D AFK63_00350 sulfur relay protein TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D AFK63_00345 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D AFK63_00340 sulfur relay protein TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D AFK63_11375 sulfur relay protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D AFK63_03530 iscA; iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein D AFK63_02340 ygfZ; global regulator K06980 ygfZ; tRNA-modifying protein YgfZ D AFK63_15950 tRNA hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D AFK63_04420 mnmC; FAD-dependent oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D AFK63_13730 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D AFK63_13525 queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D AFK63_02765 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D AFK63_02760 pyrroloquinoline quinone biosynthesis protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D AFK63_02685 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D AFK63_01155 [Fe-S]-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D AFK63_10340 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D AFK63_13725 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D AFK63_13645 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D AFK63_14520 tilS; tRNA(Ile)-lysidine ligase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D AFK63_03810 methionine tRNA cytidine acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D AFK63_06945 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D AFK63_01935 UGMP family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D AFK63_01165 ADP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D AFK63_02630 sulfur acceptor protein CsdL K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D AFK63_01220 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AFK63_16325 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cmw03012] D AFK63_07630 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D AFK63_16345 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D AFK63_10045 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D AFK63_00300 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D AFK63_05235 ABC transporter K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D AFK63_14615 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D AFK63_16990 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AFK63_00370 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AFK63_00365 fusA; elongation factor G K02355 fusA; elongation factor G D AFK63_17850 selenocysteinyl-tRNA-specific translation factor K03833 selB; selenocysteine-specific elongation factor D AFK63_07225 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D AFK63_14605 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D AFK63_07230 SAM-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D AFK63_07185 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D AFK63_11730 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D AFK63_04995 elongation factor P K02356 efp; elongation factor P D AFK63_01070 elongation factor P K02356 efp; elongation factor P D AFK63_01115 poxB regulator PoxA K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D AFK63_01065 EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D AFK63_04410 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D AFK63_02375 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D AFK63_15545 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D AFK63_00535 ribosome rescue factor A K09890 arfA; alternative ribosome-rescue factor D AFK63_14495 hypothetical protein K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:cmw03110] D AFK63_11735 clpA; Clp protease ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D AFK63_03260 Clp protease ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D AFK63_13560 clpX; Clp protease ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D AFK63_17635 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D AFK63_13310 heat-shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D AFK63_00955 histidine kinase K04079 HSP90A; molecular chaperone HtpG D AFK63_15310 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AFK63_03540 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA D AFK63_13595 heat-shock protein Hsp70 K04045 hscC; molecular chaperone HscC D AFK63_06315 2-alkenal reductase K04045 hscC; molecular chaperone HscC D AFK63_05320 chaperone K04046 yegD; hypothetical chaperone protein D AFK63_01055 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AFK63_15305 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D AFK63_15145 djlA; Dna-J like membrane chaperone protein K05801 djlA; DnaJ like chaperone protein D AFK63_03535 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D AFK63_00085 hslO; Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33 D AFK63_03165 heat -hock protein GrpE K03687 GRPE; molecular chaperone GrpE D AFK63_18240 heat-shock protein IbpA K04080 ibpA; molecular chaperone IbpA D AFK63_18235 molecular chaperone K04081 ibpB; molecular chaperone IbpB D AFK63_00090 heat-shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D AFK63_01050 groES; molecular chaperone GroES K04078 groES; chaperonin GroES D AFK63_14645 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D AFK63_16385 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D AFK63_18540 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AFK63_06195 sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein D AFK63_19030 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AFK63_10175 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D AFK63_19060 cpxP; repressor CpxP K06006 cpxP; periplasmic protein CpxP/Spy D AFK63_09830 hydrogenase nickel incorporation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D AFK63_09835 hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D AFK63_08480 twin-argninine leader-binding protein DmsD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D AFK63_12700 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D AFK63_00225 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D AFK63_13155 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D AFK63_13545 molecular chaperone K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D AFK63_00330 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D AFK63_01295 peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D AFK63_15245 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D AFK63_00320 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D AFK63_17410 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D AFK63_15155 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D AFK63_17390 trxA; thioredoxin K03671 TXN; thioredoxin D AFK63_03320 thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D AFK63_13220 hypothetical protein K05838 ybbN; putative thioredoxin D AFK63_11075 glutaredoxin K03675 grxB; glutaredoxin 2 D AFK63_01595 glutaredoxin K03675 grxB; glutaredoxin 2 D AFK63_19025 glutaredoxin K03676 grxC; glutaredoxin 3 D AFK63_09580 glutaredoxin K07390 grxD; monothiol glutaredoxin D AFK63_18670 protein disulfide isomerase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D AFK63_07000 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D AFK63_02365 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D AFK63_01025 dipZ; thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D AFK63_04340 disulfide bond formation protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:cmw04131] D AFK63_03605 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AFK63_14210 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AFK63_10260 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AFK63_12415 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AFK63_09900 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AFK63_06675 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AFK63_13310 heat-shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D AFK63_00955 histidine kinase K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:cmw04121] C 03051 Proteasome [BR:cmw03051] D AFK63_13310 heat-shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D AFK63_00955 histidine kinase K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:cmw03032] D AFK63_14380 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D AFK63_05755 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AFK63_10645 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AFK63_16875 DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D AFK63_13550 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AFK63_10020 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AFK63_11625 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AFK63_18310 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D AFK63_00830 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AFK63_15645 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC D AFK63_01925 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D AFK63_00870 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AFK63_14545 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AFK63_18305 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AFK63_15925 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AFK63_12860 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AFK63_10890 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AFK63_14375 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AFK63_13325 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AFK63_15560 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D AFK63_06735 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D AFK63_14550 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D AFK63_18680 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AFK63_04090 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AFK63_18860 ligB; aromatic ring-opening dioxygenase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AFK63_09380 DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein D AFK63_00155 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D AFK63_12670 replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication D AFK63_03760 DNA replication initiation factor K10763 hda; DnaA-homolog protein D AFK63_04790 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AFK63_18295 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AFK63_02100 DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AFK63_02035 DNA topoisomerase IV K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AFK63_07590 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D AFK63_10220 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cmw03036] D AFK63_05755 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AFK63_10645 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AFK63_03385 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D AFK63_07420 transcriptional regulator K03746 hns; DNA-binding protein H-NS D AFK63_16875 DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D AFK63_13550 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AFK63_10020 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AFK63_11625 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AFK63_15395 transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D AFK63_18310 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D AFK63_16245 DnaA initiator-associating protein DiaA K12961 diaA; DnaA initiator-associating protein D AFK63_11390 heat-shock protein HspQ K11940 hspQ; heat shock protein HspQ D AFK63_12135 DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein D AFK63_16780 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AFK63_01185 hfq; RNA-binding protein K03666 hfq; host factor-I protein D AFK63_02255 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D AFK63_11705 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AFK63_11590 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AFK63_04915 nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein D AFK63_11555 mukB; cell division protein MukB K03632 mukB; chromosome partition protein MukB D AFK63_11560 condesin subunit E K03804 mukE; chromosome partition protein MukE D AFK63_11565 condesin subunit F K03633 mukF; chromosome partition protein MukF D AFK63_14970 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D AFK63_02815 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D AFK63_19725 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AFK63_15020 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AFK63_11700 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D AFK63_15025 cell division protein FtsL K03586 ftsL; cell division protein FtsL D AFK63_17625 cell division protein FtsN K03591 ftsN; cell division protein FtsN D AFK63_14975 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D AFK63_14995 flippase K03588 ftsW; cell division protein FtsW D AFK63_19730 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D AFK63_14965 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AFK63_04085 cell division protein ZipA K03528 zipA; cell division protein ZipA D AFK63_02275 Z-ring-associated protein K09888 zapA; cell division protein ZapA D AFK63_17650 septal ring assembly protein ZapB K09892 zapB; cell division protein ZapB D AFK63_11480 cell division protein ZapC K18657 zapC; cell division protein ZapC D AFK63_14935 hypothetical protein K18778 zapD; cell division protein ZapD D AFK63_16615 hypothetical protein K06916 zapE; cell division protein ZapE D AFK63_13970 ATPase K06916 zapE; cell division protein ZapE D AFK63_01290 cell envelope opacity-associated protein A K07269 ytfB; cell division protein YtfB D AFK63_04000 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AFK63_02610 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AFK63_01170 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AFK63_13355 multidrug transporter K03585 acrA; membrane fusion protein, multidrug efflux system D AFK63_06975 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D AFK63_06970 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD D AFK63_06965 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D AFK63_11425 cell division protein K13053 sulA; cell division inhibitor SulA D AFK63_18885 slmA; division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator D AFK63_12670 replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication D AFK63_16715 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AFK63_16710 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D AFK63_16705 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D AFK63_12885 cell wall shape-determining protein K05837 rodA; rod shape determining protein RodA D AFK63_06475 ATPase K03496 parA; chromosome partitioning protein D AFK63_06435 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AFK63_02100 DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AFK63_02035 DNA topoisomerase IV K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AFK63_18555 hypothetical protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D AFK63_18550 gidB; 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AFK63_17245 xerC; recombinase XerC K03733 xerC; integrase/recombinase XerC D AFK63_02360 xerD; recombinase XerD K04763 xerD; integrase/recombinase XerD D AFK63_05205 antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning D AFK63_00230 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D AFK63_18685 GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:cmw03400] D AFK63_09320 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D AFK63_12615 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D AFK63_03330 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D AFK63_01805 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D AFK63_09475 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AFK63_14945 nucleoside triphosphate hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AFK63_00275 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AFK63_18890 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AFK63_04820 6-O-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D AFK63_04825 alpha-ketoglutarate-dependent dioxygenase K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D AFK63_01910 formamidopyrimidine-DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D AFK63_05325 3-methyladenine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D AFK63_19415 DNA-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AFK63_18915 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AFK63_12570 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D AFK63_10205 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AFK63_05035 endonuclease K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D AFK63_16885 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D AFK63_02370 ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AFK63_04090 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AFK63_18860 ligB; aromatic ring-opening dioxygenase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AFK63_18680 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AFK63_00865 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D AFK63_12310 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D AFK63_06030 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D AFK63_10165 endonuclease K05984 cho; excinuclease Cho [EC:3.1.25.-] D AFK63_17235 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AFK63_16955 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AFK63_16950 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AFK63_00515 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AFK63_18850 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D AFK63_10815 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D AFK63_02890 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D AFK63_01175 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D AFK63_02545 DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH D AFK63_05585 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D AFK63_03660 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D AFK63_13650 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D AFK63_06730 exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D AFK63_14545 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AFK63_18305 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AFK63_15925 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AFK63_12860 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AFK63_10890 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AFK63_14375 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AFK63_13325 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AFK63_15560 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D AFK63_06735 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D AFK63_00870 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AFK63_00155 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D AFK63_05760 endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D AFK63_02595 recB; exonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D AFK63_02585 recC; exonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D AFK63_02600 recD; exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D AFK63_02945 recA; recombinase A K03553 recA; recombination protein RecA D AFK63_06375 ruvA; ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D AFK63_06380 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AFK63_06370 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AFK63_10635 crossover junction endodeoxyribonuclease K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D AFK63_07825 endodeoxyribonuclease K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D AFK63_17615 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D AFK63_01275 primosomal replication protein N K02686 priB; primosomal replication protein N D AFK63_13340 primosomal protein K04067 priC; primosomal replication protein N'' D AFK63_15640 primosomal protein DnaI K02317 dnaT; DNA replication protein DnaT D AFK63_13780 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 D AFK63_13775 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D AFK63_15485 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D AFK63_18300 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D AFK63_18835 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D AFK63_03395 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D AFK63_13315 recR; recombination protein RecR K06187 recR; recombination protein RecR D AFK63_03155 recombination and repair protein K03631 recN; DNA repair protein RecN (Recombination protein N) D AFK63_13790 recombination associated protein K03554 rdgC; recombination associated protein RdgC D AFK63_14825 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D AFK63_04925 hypothetical protein K19789 radD; DNA repair protein RadD D AFK63_04790 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AFK63_18295 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AFK63_07590 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D AFK63_16875 DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D AFK63_13550 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AFK63_16780 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AFK63_10020 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AFK63_11625 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AFK63_17200 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AFK63_07420 transcriptional regulator K03746 hns; DNA-binding protein H-NS D AFK63_14340 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D AFK63_08400 DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V D AFK63_10390 DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V D AFK63_08395 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D AFK63_10455 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D AFK63_00785 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D AFK63_10640 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D AFK63_15130 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D AFK63_11090 damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I D AFK63_02950 recX; recombination regulator RecX K03565 recX; regulatory protein D AFK63_17405 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D AFK63_11405 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4] D AFK63_12210 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D AFK63_06940 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D AFK63_03055 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AFK63_04780 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AFK63_03050 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AFK63_04775 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:cmw03029] D AFK63_16345 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D AFK63_10045 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D AFK63_14615 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D AFK63_16990 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AFK63_00370 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AFK63_00365 fusA; elongation factor G K02355 fusA; elongation factor G D AFK63_03390 GTP-binding protein Era K03595 era; GTPase D AFK63_09495 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AFK63_12850 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AFK63_06280 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AFK63_00870 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AFK63_14580 outer membrane assembly protein K07277 SAM50; outer membrane protein insertion porin family D AFK63_15310 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AFK63_03165 heat -hock protein GrpE K03687 GRPE; molecular chaperone GrpE D AFK63_01055 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AFK63_01050 groES; molecular chaperone GroES K04078 groES; chaperonin GroES D AFK63_15305 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D AFK63_03520 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AFK63_03535 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D AFK63_09580 glutaredoxin K07390 grxD; monothiol glutaredoxin D AFK63_05205 antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning D AFK63_13620 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AFK63_18320 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D AFK63_13310 heat-shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D AFK63_00955 histidine kinase K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cmw02000] D AFK63_11615 lipid transporter ATP-binding/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D AFK63_13480 multidrug ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D AFK63_13475 multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D AFK63_03125 ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D AFK63_11720 amino acid ABC transporter permease K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D AFK63_11715 amino acid ABC transporter permease K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D AFK63_11750 macrolide transporter K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D AFK63_04830 multidrug transporter membrane component/ATP-binding component K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D AFK63_11465 ABC transporter ATPase K15738 uup; ABC transport system ATP-binding/permease protein D AFK63_04030 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D AFK63_19075 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D AFK63_04035 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D AFK63_04040 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein D AFK63_04045 sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D AFK63_12380 modA; molybdate transporter K02020 modA; molybdate transport system substrate-binding protein D AFK63_12375 modB; molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein D AFK63_12370 modC; molybdate transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D AFK63_12390 molybdenum ABC transporter ATP-binding protein K05776 modF; molybdate transport system ATP-binding protein D AFK63_07285 nitrate/bicarbonate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D AFK63_07290 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D AFK63_07295 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D AFK63_13940 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D AFK63_13930 taurine transporter subunit K15552 tauC; taurine transport system permease protein D AFK63_13935 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D AFK63_11495 alkanesulfonate transporter substrate-binding subunit K15553 ssuA; sulfonate transport system substrate-binding protein D AFK63_09000 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AFK63_11505 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D AFK63_09015 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AFK63_11510 ssuB; aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AFK63_09010 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AFK63_15090 tbpA; thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D AFK63_15095 thiP; thiamine ABC transporter permease K02063 thiP; thiamine transport system permease protein D AFK63_15100 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D AFK63_10785 potD; spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D AFK63_10780 potC; spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D AFK63_10775 potB; spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D AFK63_10770 potA; putrescine/spermidine ABC transporter ATPase K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D AFK63_11890 spermidine/putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AFK63_11875 spermidine/putrescine ABC transporter permease K11074 potI; putrescine transport system permease protein D AFK63_11880 spermidine/putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein D AFK63_11885 potG; putrescine transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D AFK63_09235 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AFK63_09220 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AFK63_07135 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AFK63_09225 spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D AFK63_07130 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D AFK63_09230 spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D AFK63_03035 proX; glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AFK63_03040 glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D AFK63_03045 glycine/betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D AFK63_08465 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D AFK63_05165 osmoprotectant uptake system substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D AFK63_05180 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D AFK63_08460 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D AFK63_08470 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D AFK63_05170 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D AFK63_08455 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D AFK63_05175 ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D AFK63_19360 lipid kinase K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D AFK63_19355 lipid kinase K02050 ABC.SN.P; NitT/TauT family transport system permease protein D AFK63_19350 lauroyl acyltransferase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D AFK63_00745 malE; sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein D AFK63_00740 malF; maltose transporter K10109 malF; maltose/maltodextrin transport system permease protein D AFK63_00735 malG; maltose transporter permease K10110 malG; maltose/maltodextrin transport system permease protein D AFK63_00750 maltose/maltodextrin transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AFK63_12970 ABC transporter K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AFK63_15765 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AFK63_08035 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AFK63_15760 cyclodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D AFK63_15755 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D AFK63_15750 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D AFK63_12985 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D AFK63_12980 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D AFK63_12975 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D AFK63_06125 sugar ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein D AFK63_06135 araH; L-arabinose transporter permease K10538 araH; L-arabinose transport system permease protein D AFK63_06130 araG; L-arabinose transporter ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D AFK63_02440 sugar ABC transporter substrate-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein D AFK63_02455 sugar ABC transporter permease K10193 togM; oligogalacturonide transport system permease protein D AFK63_02450 sugar ABC transporter permease K10194 togN; oligogalacturonide transport system permease protein D AFK63_02445 sugar ABC transporter ATP-binding protein K10195 togA; oligogalacturonide transport system ATP-binding protein D AFK63_05080 sugar ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D AFK63_05090 mglC; beta-methylgalactoside transporter permease K10541 mglC; methyl-galactoside transport system permease protein D AFK63_05085 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D AFK63_19285 xylF; D-xylose transporter subunit XylF K10543 xylF; D-xylose transport system substrate-binding protein D AFK63_19275 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D AFK63_19280 xylose transporter K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D AFK63_17725 ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein D AFK63_17735 branched-chain amino acid ABC transporter permease K10560 rhaP; rhamnose transport system permease protein D AFK63_17740 branched-chain amino acid ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein D AFK63_17730 hypothetical protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D AFK63_18605 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein D AFK63_18600 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D AFK63_18595 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D AFK63_01450 sugar ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D AFK63_01465 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D AFK63_01460 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D AFK63_01455 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D AFK63_19800 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D AFK63_19805 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D AFK63_19810 glycerol-3-phosphate transporter K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D AFK63_19815 ugpC; glycerol-3-phosphate transporter ATP-binding subunit K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D AFK63_16470 phospholipid ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D AFK63_16475 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D AFK63_16480 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D AFK63_16465 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D AFK63_16460 phospholipid ABC transporter substrate-binding protein K07122 mlaB; phospholipid transport system transporter-binding protein D AFK63_07745 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D AFK63_07750 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D AFK63_07755 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D AFK63_03975 sugar ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D AFK63_03970 sugar ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D AFK63_03965 ABC transporter K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D AFK63_18485 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AFK63_18480 pstC; phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D AFK63_18475 pstA; phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein D AFK63_18470 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AFK63_04490 histidine ABC transporter substrate-binding protein HisJ K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D AFK63_04505 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein D AFK63_04500 amino acid ABC transporter permease K10016 hisQ; histidine transport system permease protein D AFK63_04510 amino acid transporter K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D AFK63_04495 histidine ABC transporter substrate-binding protein HisJ K10014 hisJ; histidine transport system substrate-binding protein D AFK63_12140 glnH; glutamine ABC transporter substrate-bindnig protein K10036 glnH; glutamine transport system substrate-binding protein D AFK63_12145 glnP; glutamine ABC transporter permease K10037 glnP; glutamine transport system permease protein D AFK63_12150 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D AFK63_11840 arginine ABC transporter substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D AFK63_11825 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein D AFK63_11835 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein D AFK63_11830 arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein D AFK63_11820 arginine ABC transporter ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D AFK63_12815 amino acid transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D AFK63_12825 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D AFK63_12820 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D AFK63_12830 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D AFK63_16810 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D AFK63_16815 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D AFK63_16820 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D AFK63_16825 ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D AFK63_05995 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D AFK63_06005 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D AFK63_06010 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D AFK63_19755 leucine ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AFK63_19770 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D AFK63_19775 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein D AFK63_19780 livG; leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein D AFK63_19785 livF; leucine/isoleucine/valine transporter ATP-binding subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein D AFK63_13195 methionine ABC transporter ATPase K02073 metQ; D-methionine transport system substrate-binding protein D AFK63_13405 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D AFK63_14085 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D AFK63_14470 metQ; DL-methionine transporter substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein D AFK63_13185 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein D AFK63_13415 metal ABC transporter permease K02072 metI; D-methionine transport system permease protein D AFK63_14090 methionine import system permease MetP K02072 metI; D-methionine transport system permease protein D AFK63_14465 DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein D AFK63_13190 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D AFK63_14095 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D AFK63_14460 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein D AFK63_08605 branched-chain amino acid ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D AFK63_08610 urea ABC transporter permease K11960 urtB; urea transport system permease protein D AFK63_08615 amino acid ABC transporter permease K11961 urtC; urea transport system permease protein D AFK63_08620 urea ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D AFK63_08625 urea ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D AFK63_12315 branched-chain amino acid ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D AFK63_02920 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AFK63_02925 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AFK63_02930 amino acid ABC transporter ATPase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D AFK63_08080 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AFK63_07440 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AFK63_11365 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AFK63_07445 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D AFK63_07450 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D AFK63_07455 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein D AFK63_07460 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D AFK63_14265 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AFK63_19450 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AFK63_09115 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AFK63_19455 peptide transporter K12369 dppB; dipeptide transport system permease protein D AFK63_19460 peptide transporter K12370 dppC; dipeptide transport system permease protein D AFK63_19465 dppD; peptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D AFK63_19470 dppF; peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D AFK63_07710 peptide ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D AFK63_07705 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein D AFK63_07700 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein D AFK63_07695 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D AFK63_07690 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D AFK63_12050 glutathione ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D AFK63_12045 glutathione ABC transporter permease K13890 gsiC; glutathione transport system permease protein D AFK63_12040 glutathione ABC transporter permease K13891 gsiD; glutathione transport system permease protein D AFK63_12055 glutathione ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D AFK63_09280 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AFK63_09055 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AFK63_09285 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AFK63_09065 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AFK63_09290 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AFK63_09060 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AFK63_09295 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AFK63_04960 antibiotic ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D AFK63_04955 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein D AFK63_04950 microcin ABC transporter permease K13895 yejE; microcin C transport system permease protein D AFK63_04945 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D AFK63_14690 iron-hydroxamate transporter substrate-binding subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D AFK63_14685 iron-hydroxamate transporter permease subunit K23228 fhuB; ferric hydroxamate transport system permease protein D AFK63_14695 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D AFK63_03905 iron-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D AFK63_03895 iron-enterobactin transporter K23186 fepD; iron-siderophore transport system permease protein D AFK63_03890 iron-enterobactin transporter permease K23187 fepG; iron-siderophore transport system permease protein D AFK63_03885 iron-enterobactin transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D AFK63_14660 vitamin B12-transporter protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein D AFK63_10015 Vitamin B12 import system permease BtuC K06073 btuC; vitamin B12 transport system permease protein D AFK63_10005 vitamin B12-transporter ATPase K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D AFK63_06395 znuA; zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D AFK63_06385 znuB; high-affinity zinc transporter membrane component K09816 znuB; zinc transport system permease protein D AFK63_06390 znuC; zinc ABC transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D AFK63_15465 polysialic acid transporter K09688 kpsM; capsular polysaccharide transport system permease protein D AFK63_15425 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein D AFK63_15460 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D AFK63_15915 lipopolysaccharide ABC transporter permease K07091 lptF; lipopolysaccharide export system permease protein D AFK63_15910 lipopolysaccharide ABC transporter permease K11720 lptG; lipopolysaccharide export system permease protein D AFK63_16510 sugar ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D AFK63_10800 outer membrane-specific lipoprotein transporter subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein D AFK63_10810 outer membrane-specific lipoprotein transporter subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein D AFK63_10805 lolD; lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D AFK63_04325 cytochrome C biogenesis protein CcmD K02196 ccmD; heme exporter protein D D AFK63_04320 heme ABC transporter permease K02195 ccmC; heme exporter protein C D AFK63_04315 heme ABC transporter permease K02194 ccmB; heme exporter protein B D AFK63_04310 cytochrome C biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D AFK63_19730 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D AFK63_19725 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AFK63_14770 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D AFK63_14775 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AFK63_13200 sugar ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D AFK63_13205 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AFK63_09930 sufC; cysteine desulfurase K09013 sufC; Fe-S cluster assembly ATP-binding protein D AFK63_09425 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D AFK63_09635 multidrug transporter K26939 norM; MATE family, multidrug efflux pump D AFK63_05630 MATE family multidrug transporter K26937 dinF; MATE family, multidrug efflux pump D AFK63_00790 damage-inducible protein K26937 dinF; MATE family, multidrug efflux pump D AFK63_02190 D-galactose transporter GalP K08137 galP; MFS transporter, SP family, galactose:H+ symporter D AFK63_13840 arabinose:proton symporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter D AFK63_14105 MFS transporter K06609 iolT; MFS transporter, SP family, major inositol transporter D AFK63_14165 lacY; galactoside permease K02532 lacY; MFS transporter, OHS family, lactose permease D AFK63_17755 lacY; galactoside permease K02532 lacY; MFS transporter, OHS family, lactose permease D AFK63_11855 MFS sugar transporter K02532 lacY; MFS transporter, OHS family, lactose permease D AFK63_05010 sugar transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D AFK63_15080 sugar transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D AFK63_03295 alpha-ketoglutarate transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D AFK63_08295 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D AFK63_10085 glycine/betaine ABC transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D AFK63_15320 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D AFK63_05680 shikimate transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein D AFK63_19425 hypothetical protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D AFK63_04265 DgoT K03535 gudP; MFS transporter, ACS family, glucarate transporter D AFK63_12075 hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D AFK63_08530 hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D AFK63_16100 hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D AFK63_18265 glucarate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D AFK63_10300 hypothetical protein K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter D AFK63_07055 hypothetical protein K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter D AFK63_03485 3-phenylpropionic acid transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D AFK63_04760 glpT; sn-glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D AFK63_07330 nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D AFK63_02525 lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D AFK63_03900 enterobactin transporter K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter D AFK63_13585 ampG; muropeptide transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D AFK63_04935 bicyclomycin/multidrug efflux system K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D AFK63_18210 multidrug resistance protein D K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD D AFK63_08655 arabinose transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D AFK63_11955 multidrug transporter K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D AFK63_13850 multidrug transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D AFK63_11070 multidrug resistance protein MdtH K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein D AFK63_09590 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D AFK63_14410 MFS sugar transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D AFK63_03015 emrB; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D AFK63_12100 disulfide bond formation protein DsbA K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D AFK63_09740 transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D AFK63_05290 transporter K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D AFK63_18330 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D AFK63_08435 hypothetical protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D AFK63_11680 MFS transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein D AFK63_00220 transporter K06141 tsgA; MFS transporter, TsgA protein D AFK63_04065 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D AFK63_02555 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D AFK63_04070 PTS sugar transporter K02784 ptsH; phosphocarrier protein HPr D AFK63_16535 phosphohistidinoprotein-hexose phosphotransferase K08485 ptsO; phosphocarrier protein NPr D AFK63_05015 bifunctional PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D AFK63_04060 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D AFK63_10880 PTS glucose-specific subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D AFK63_15735 PTS sugar transporter K02778 ptsGb; glucose PTS system EIIB component [EC:2.7.1.199] D AFK63_13140 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D AFK63_12720 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D AFK63_12240 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_02745 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_03590 PTS glucose transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_09410 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D AFK63_16165 PTS sucrose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D AFK63_03425 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D AFK63_12220 PTS beta-glucoside transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D AFK63_15700 PTS cellobiose transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D AFK63_01575 PTS maltose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D AFK63_05025 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D AFK63_17865 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D AFK63_16940 PTS lactose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D AFK63_01695 molecular chaperone TorD K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D AFK63_16935 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D AFK63_02500 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D AFK63_01705 PTS lactose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D AFK63_09615 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AFK63_02490 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AFK63_15600 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AFK63_01700 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AFK63_16205 PTS galactitol transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D AFK63_16210 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D AFK63_16215 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D AFK63_06860 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D AFK63_06855 PTS mannose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D AFK63_06850 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D AFK63_16525 transcriptional regulator K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D AFK63_04240 hypothetical protein K06188 aqpZ; aquaporin Z D AFK63_17655 glycerol uptake facilitator GlpF K02440 glpF; glycerol uptake facilitator D AFK63_07465 transporter K10716 kch; voltage-gated potassium channel D AFK63_13465 ammonium transporter K03320 amt; ammonium transporter, Amt family D AFK63_11980 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AFK63_04535 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AFK63_00905 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AFK63_09485 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AFK63_16600 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D AFK63_11370 hypothetical protein K19416 yccA; modulator of FtsH protease D AFK63_11665 formate transporter K06212 focA; formate transporter D AFK63_00205 nitrite transporter NirC K02598 nirC; nitrite transporter D AFK63_00540 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D AFK63_13345 hypothetical protein K05802 mscK; potassium-dependent mechanosensitive channel D AFK63_01120 mechanosensitive channel protein K22051 mscM; miniconductance mechanosensitive channel D AFK63_02240 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel D AFK63_12155 mechanosensitive channel protein K22044 ybiO; moderate conductance mechanosensitive channel D AFK63_06165 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AFK63_06170 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D AFK63_01640 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D AFK63_01645 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D AFK63_12500 colicin uptake protein TolQ K03562 tolQ; biopolymer transport protein TolQ D AFK63_12495 colicin uptake protein TolR K03560 tolR; biopolymer transport protein TolR D AFK63_04210 magnesium transporter CorA K03284 corA; magnesium transporter D AFK63_17230 magnesium transporter CorA K03284 corA; magnesium transporter D AFK63_08140 zntB; zinc transporter K16074 zntB; zinc transporter D AFK63_12930 camphor resistance protein CrcB K06199 crcB; fluoride exporter D AFK63_08570 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D AFK63_01365 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D AFK63_03170 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D AFK63_11530 porin K09476 ompF; outer membrane pore protein F D AFK63_14315 hypothetical protein K11929 phoE; outer membrane pore protein E D AFK63_04810 hypothetical protein K09475 ompC; outer membrane pore protein C D AFK63_05745 porin K14062 ompN; outer membrane protein N D AFK63_00755 lamB; maltoporin K02024 lamB; maltoporin D AFK63_15730 maltoporin K02024 lamB; maltoporin D AFK63_01690 lactam utilization protein LamB K02024 lamB; maltoporin D AFK63_16160 porin K16077 scrY; sucrose porin D AFK63_11430 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D AFK63_12125 ompX; outer membrane protein OmpX K11934 ompX; outer membrane protein X D AFK63_04360 long-chain fatty acid outer membrane transporter K06076 fadL; long-chain fatty acid transport protein D AFK63_13705 ion channel protein Tsx K05517 tsx; nucleoside-specific channel-forming protein D AFK63_02185 ion channel protein Tsx K05517 tsx; nucleoside-specific channel-forming protein D AFK63_12195 fimbrial assembly protein K07347 fimD; outer membrane usher protein D AFK63_11190 hypothetical protein K07347 fimD; outer membrane usher protein D AFK63_06200 fimbrial assembly protein K07347 fimD; outer membrane usher protein D AFK63_16590 adhesin K12678 aidA-I; autotransporter family porin D AFK63_15675 serine protease K12685 ssp; subtilase-type serine protease [EC:3.4.21.-] D AFK63_08725 lipase K12686 apeE; outer membrane lipase/esterase D AFK63_09890 hypothetical protein K19231 bmaC; fibronectin-binding autotransporter adhesin D AFK63_07500 outer membrane receptor protein K19611 fepA; ferric enterobactin receptor D AFK63_13060 outer membrane receptor protein K19611 fepA; ferric enterobactin receptor D AFK63_17505 btuB; vitamin B12/cobalamin outer membrane transporter K16092 btuB; vitamin B12 transporter D AFK63_10875 ferric-rhodotorulic acid transporter K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D AFK63_14185 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AFK63_08095 ferrichrysobactin receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AFK63_09025 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AFK63_07100 ferrioxamine B receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AFK63_14700 ferrichrome transporter K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AFK63_02010 hypothetical protein K12340 tolC; outer membrane protein D AFK63_03120 type I secretion system outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D AFK63_08240 transporter K18139 oprM; outer membrane protein, multidrug efflux system D AFK63_06535 OprM K18139 oprM; outer membrane protein, multidrug efflux system D AFK63_05355 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D AFK63_14580 outer membrane assembly protein K07277 SAM50; outer membrane protein insertion porin family D AFK63_03635 membrane biogenesis protein K17713 bamB; outer membrane protein assembly factor BamB D AFK63_03795 hypothetical protein K07287 bamC; outer membrane protein assembly factor BamC D AFK63_03245 membrane biogenesis protein K05807 bamD; outer membrane protein assembly factor BamD D AFK63_03150 membrane biogenesis protein K06186 bamE; outer membrane protein assembly factor BamE D AFK63_01380 hypothetical protein K07278 tamA; translocation and assembly module TamA D AFK63_01385 translocation and assembly module TamB K09800 tamB; translocation and assembly module TamB D AFK63_02415 porin K22110 kdgM; oligogalacturonate-specific porin family protein D AFK63_16505 lipopolysaccharide transporter K09774 lptA; lipopolysaccharide export system protein LptA D AFK63_16500 lipopolysaccharide transporter K11719 lptC; lipopolysaccharide export system protein LptC D AFK63_15150 LPS biosynthesis protein K04744 lptD; LPS-assembly protein D AFK63_12855 LPS-assembly lipoprotein RlpB K03643 lptE; LPS-assembly lipoprotein D AFK63_19515 cellulose synthase K20543 bcsC; cellulose synthase operon protein C D AFK63_12805 magnesium/cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein D AFK63_05110 hypothetical protein K06518 cidA; holin-like protein D AFK63_06265 MFS transporter K16210 togT; oligogalacturonide transporter D AFK63_05050 lysine transporter K11733 lysP; lysine-specific permease D AFK63_14880 amino acid permease K11734 aroP; aromatic amino acid transport protein AroP D AFK63_13755 proY; proline-specific permease K11736 proY; proline-specific permease ProY D AFK63_01300 amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter D AFK63_08990 L-asparagine permease K11738 ansP; L-asparagine permease D AFK63_13950 amino acid transporter K16235 mmuP; S-methylmethionine transporter D AFK63_09860 Putrescine importer PuuP K14052 puuP; putrescine importer D AFK63_12660 potE; putrescine transporter K03756 potE; putrescine:ornithine antiporter D AFK63_09350 arginine:ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D AFK63_13975 ethanolamine permease K16238 eat; ethanolamine permease D AFK63_00195 frlA; fructoselysine transporter K19540 frlA; fructoselysine transporter D AFK63_12430 zinc transporter ZitB K16264 czcD; cobalt-zinc-cadmium efflux system protein D AFK63_19065 fieF; ferrous iron transporter K13283 fieF; ferrous-iron efflux pump FieF D AFK63_01990 zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D AFK63_13360 multidrug transporter K18138 acrB; multidrug efflux pump D AFK63_03840 multidrug transporter K18324 acrD; multidrug efflux pump D AFK63_16800 multidrug transporter K18142 acrF; multidrug efflux pump D AFK63_05300 multidrug transporter K07788 mdtB; multidrug efflux pump D AFK63_05295 multidrug transporter K07789 mdtC; multidrug efflux pump D AFK63_09260 multidrug transporter K03297 emrE; small multidrug resistance pump D AFK63_01085 multidrug transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D AFK63_08420 multidrug transporter K11742 mdtI; spermidine export protein MdtI D AFK63_08415 multidrug transporter K11743 mdtJ; spermidine export protein MdtJ D AFK63_08635 acetylserine transporter K15268 eamA; O-acetylserine/cysteine efflux transporter D AFK63_12130 threonine transporter K11939 rhtA; inner membrane transporter RhtA D AFK63_17695 rhamnose:proton symporter K02856 rhaT; L-rhamnose-H+ transport protein D AFK63_17215 chloramphenical resistance permease RarD K05786 rarD; chloramphenicol-sensitive protein RarD D AFK63_09100 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AFK63_14060 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AFK63_14065 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AFK63_08520 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D AFK63_19860 gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter D AFK63_13295 gluconate:proton symporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D AFK63_12990 permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D AFK63_00990 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D AFK63_01035 C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D AFK63_06105 C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D AFK63_17670 L-lactate permease K00427 lldP; L-lactate permease D AFK63_09695 choline transporter K02168 betT; choline/glycine/proline betaine transport protein D AFK63_07250 calcium:proton antiporter K07300 chaA; Ca2+:H+ antiporter D AFK63_16485 calcium:proton antiporter K07301 yrbG; cation:H+ antiporter D AFK63_19630 phosphate transporter PitA K16322 pit; low-affinity inorganic phosphate transporter D AFK63_16760 panF; sodium/panthothenate symporter K14392 panF; sodium/pantothenate symporter D AFK63_11255 proline:sodium symporter PutP K11928 putP; sodium/proline symporter D AFK63_00925 actP; acetate permease K14393 actP; cation/acetate symporter D AFK63_00940 glutamate:protein symporter K11102 gltP; proton glutamate symport protein D AFK63_19525 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D AFK63_16080 serine/threonine protein kinase K07862 sstT; serine/threonine transporter D AFK63_15275 nhaA; sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D AFK63_07005 nhaB; sodium:proton antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family D AFK63_00915 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D AFK63_07030 cvrA; potassium:proton antiporter K11105 cvrA; potassium/hydrogen antiporter D AFK63_15190 potassium transporter KefC K11745 kefC; glutathione-regulated potassium-efflux system protein KefC D AFK63_15195 potassium transporter KefF K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF D AFK63_00310 potassium transporter KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D AFK63_00305 potassium transporter KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D AFK63_13275 cation:proton antiport protein K26735 KEA4_5_6; K+:H+ antiporter D AFK63_17060 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein D AFK63_00545 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein D AFK63_15690 cytosine permease K10974 codB; cytosine permease D AFK63_03755 uracil transporter K02824 uraA; uracil permease D AFK63_11300 pyrimidine permease K09016 rutG; putative pyrimidine permease RutG D AFK63_18785 xanthine permease XanP K16345 xanP; xanthine permease XanP D AFK63_00910 permease K06901 pbuG; adenine/guanine/hypoxanthine permease D AFK63_18450 adenine permease PurP K06901 pbuG; adenine/guanine/hypoxanthine permease D AFK63_04155 nucleoside permease K11535 nupC; nucleoside transport protein D AFK63_06060 tyrosine transporter TyrP K03834 tyrP; tyrosine-specific transport protein D AFK63_16305 tryptophan permease K03835 mtr; tryptophan-specific transport protein D AFK63_02675 serine/threonine protein kinase K03837 sdaC; serine transporter D AFK63_08380 benzoate transporter K05782 benE; benzoate membrane transport protein D AFK63_14675 H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family D AFK63_09760 nickel transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D AFK63_04835 transporter K03321 TC.SULP; sulfate permease, SulP family D AFK63_07200 transporter K03321 TC.SULP; sulfate permease, SulP family D AFK63_04160 manganese transport protein MntH K03322 mntH; manganese transport protein D AFK63_00655 hypothetical protein K03324 yjbB; phosphate:Na+ symporter D AFK63_07985 arsenic transporter K03893 arsB; arsenical pump membrane protein D AFK63_12945 dcuC; C4-dicarboxylate transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family D AFK63_17340 O-antigen translocase K16693 wzxE; enterobacterial common antigen flippase D AFK63_05435 colanic acid transporter K16695 wzxC; lipopolysaccharide exporter D AFK63_11050 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D AFK63_02065 transporter K13936 mdcF; malonate transporter and related proteins D AFK63_18585 trkD; potassium transport protein Kup K03549 kup; KUP system potassium uptake protein D AFK63_02245 arginine transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D AFK63_17190 rhtB; homoserine transporter K05834 rhtB; homoserine/homoserine lactone efflux protein D AFK63_17195 threonine transporter K05835 rhtC; threonine efflux protein D AFK63_15185 lysine transporter LysE K05835 rhtC; threonine efflux protein D AFK63_18420 branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump D AFK63_17775 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D AFK63_18415 hypothetical protein K26606 azlD; branched chain amino acid efflux pump D AFK63_17780 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D AFK63_04725 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein D AFK63_04730 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D AFK63_04735 tricarboxylic transporter K07795 tctC; putative tricarboxylic transport membrane protein D AFK63_16665 p-hydroxybenzoic acid efflux subunit AaeB K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB D AFK63_03775 permease K03548 perM; putative permease D AFK63_19670 hypothetical protein K09125 yhhQ; queuosine precursor transporter D AFK63_14995 flippase K03588 ftsW; cell division protein FtsW D AFK63_06840 hypothetical protein K23242 mntP; manganese efflux pump family protein D AFK63_11240 iron permease K07243 FTR; high-affinity iron transporter D AFK63_11235 ferrous iron transporter K07224 efeO; iron uptake system component EfeO D AFK63_11230 peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D AFK63_03500 nickel transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein D AFK63_01005 nickel transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein D AFK63_01850 carbon starvation protein A K23676 btsT; pyruvate/proton symporter D AFK63_07490 energy transducer TonB K03832 tonB; periplasmic protein TonB D AFK63_12480 peptidoglycan-associated outer membrane lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D AFK63_12490 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D AFK63_12485 tolB; translocation protein TolB K03641 tolB; TolB protein D AFK63_02040 malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D AFK63_02050 malonate decarboxylase K13931 mdcC; malonate decarboxylase delta subunit D AFK63_07335 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D AFK63_07340 narH; nitrate reductase K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D AFK63_07350 narI; nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D AFK63_08485 dimethyl sulfoxide reductase K07312 ynfH; Tat-targeted selenate reductase subunit YnfH D AFK63_08495 dimethyl sulfoxide reductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D AFK63_08490 dimethyl sulfoxide reductase K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D AFK63_19405 trimethylamine N-oxide reductase I catalytic subunit K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D AFK63_03020 multidrug transporter K03543 emrA; membrane fusion protein, multidrug efflux system D AFK63_12105 EmrA K03543 emrA; membrane fusion protein, multidrug efflux system D AFK63_03130 secretion protein HlyD K12542 lapC; membrane fusion protein, adhesin transport system D AFK63_13355 multidrug transporter K03585 acrA; membrane fusion protein, multidrug efflux system D AFK63_16795 multidrug transporter K18141 acrE; membrane fusion protein, multidrug efflux system D AFK63_05305 multidrug transporter K07799 mdtA; membrane fusion protein, multidrug efflux system D AFK63_11755 macrolide transporter K13888 macA; membrane fusion protein, macrolide-specific efflux system D AFK63_16670 p-hydroxybenzoic acid efflux subunit AaeA K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA D AFK63_05365 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D AFK63_12435 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D AFK63_00045 feoA; ferrous iron transporter A K04758 feoA; ferrous iron transport protein A D AFK63_00040 feoB; ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D AFK63_00035 ferrous iron transporter C K07490 feoC; ferrous iron transport protein C D AFK63_13880 microcin B17 transporter K17938 sbmA; peptide/bleomycin uptake transporter D AFK63_19625 universal stress protein UspB K06144 uspB; universal stress protein B D AFK63_01075 entericidin B membrane lipoprotein K16348 ecnB; entericidin B D AFK63_04335 cytochrome C biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D AFK63_19095 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D AFK63_10420 copper resistance protein CopD K07245 pcoD; copper resistance protein D D AFK63_06745 hypothetical protein K07245 pcoD; copper resistance protein D D AFK63_10415 copper resistance protein CopC K07156 copC; copper resistance protein C D AFK63_06740 protein yobA precursor K07156 copC; copper resistance protein C D AFK63_06550 hypothetical protein K07274 mipA; MipA family protein D AFK63_10270 MltA-interacting protein MipA K07274 mipA; MipA family protein C 02044 Secretion system [BR:cmw02044] D AFK63_02010 hypothetical protein K12340 tolC; outer membrane protein D AFK63_03125 ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D AFK63_03130 secretion protein HlyD K12542 lapC; membrane fusion protein, adhesin transport system D AFK63_03120 type I secretion system outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D AFK63_02140 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D AFK63_02570 hypothetical protein K02679 ppdA; prepilin peptidase dependent protein A D AFK63_02575 hypothetical protein K02680 ppdB; prepilin peptidase dependent protein B D AFK63_02580 hypothetical protein K02681 ppdC; prepilin peptidase dependent protein C D AFK63_14910 pilus assembly protein K02682 ppdD; prepilin peptidase dependent protein D D AFK63_14915 hypothetical protein K02504 hofB; protein transport protein HofB D AFK63_14920 type IV pilin biogenesis protein K02505 hofC; protein transport protein HofC D AFK63_00115 pilus assembly protein K12288 hofM; pilus assembly protein HofM D AFK63_00120 pilus assembly protein HofN K12289 hofN; pilus assembly protein HofN D AFK63_00125 hypothetical protein K12290 hofO; pilus assembly protein HofO D AFK63_00130 hypothetical protein K12291 hofP; pilus assembly protein HofP D AFK63_00135 hofQ; porin K02507 hofQ; protein transport protein HofQ D AFK63_02130 hypothetical protein K02221 yggT; YggT family protein D AFK63_13540 competence protein ComEA K02237 comEA; competence protein ComEA D AFK63_11620 competence protein ComEC K02238 comEC; competence protein ComEC D AFK63_06255 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AFK63_06250 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D AFK63_05865 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AFK63_05855 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D AFK63_05850 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AFK63_05825 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AFK63_05820 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D AFK63_05815 fliP; flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AFK63_05810 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AFK63_05805 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AFK63_06610 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D AFK63_02365 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D AFK63_06620 conjugal transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D AFK63_06625 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC D AFK63_06630 conjugal transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD D AFK63_06635 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D AFK63_06655 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D AFK63_06660 conjugal transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D AFK63_06665 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI D AFK63_03690 conjugal transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D AFK63_06640 conjugal transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D AFK63_06650 conjugal transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D AFK63_16590 adhesin K12678 aidA-I; autotransporter family porin D AFK63_15675 serine protease K12685 ssp; subtilase-type serine protease [EC:3.4.21.-] D AFK63_08725 lipase K12686 apeE; outer membrane lipase/esterase D AFK63_18175 type VI secretion system protein ImpL K11891 impL; type VI secretion system protein ImpL D AFK63_18180 hypothetical protein K11892 impK; type VI secretion system protein ImpK D AFK63_18185 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D AFK63_18090 hypothetical protein K11895 impH; type VI secretion system protein ImpH D AFK63_18095 type VI secretion system protein ImpG K11896 impG; type VI secretion system protein ImpG D AFK63_18100 hypothetical protein K11897 impF; type VI secretion system protein ImpF D AFK63_18155 EvpB family type VI secretion protein K11900 impC; type VI secretion system protein ImpC D AFK63_18160 hypothetical protein K11901 impB; type VI secretion system protein ImpB D AFK63_18165 hypothetical protein K11902 impA; type VI secretion system protein ImpA D AFK63_14275 Hcp family T6SS protein CtsH1 K11903 hcp; type VI secretion system secreted protein Hcp D AFK63_18135 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D AFK63_19175 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D AFK63_17975 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D AFK63_18030 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D AFK63_08900 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D AFK63_11350 type VI secretion system lysozyme-like protein K11905 K11905; type VI secretion system protein D AFK63_18190 Type VI secretion lipoprotein/VasD K11906 vasD; type VI secretion system protein VasD D AFK63_18085 molecular chaperone K11907 vasG; type VI secretion system protein VasG D AFK63_11345 type VI secretion protein K11911 vasL; type VI secretion system protein VasL D AFK63_18170 protein phosphatase ImpM K11890 impM; type VI secretion system protein ImpM D AFK63_18105 protein of avirulence locus ImpE K11898 impE; type VI secretion system protein ImpE D AFK63_12185 ferrous iron transporter B K07345 fimA; major type 1 subunit fimbrin (pilin) D AFK63_06195 sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein D AFK63_12195 fimbrial assembly protein K07347 fimD; outer membrane usher protein D AFK63_11190 hypothetical protein K07347 fimD; outer membrane usher protein D AFK63_06200 fimbrial assembly protein K07347 fimD; outer membrane usher protein D AFK63_12205 hypothetical protein K07349 fimG; minor fimbrial subunit D AFK63_06205 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AFK63_06190 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AFK63_06185 polyketide synthase K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AFK63_01405 fimbrial assembly protein K12518 papC; outer membrane usher protein PapC D AFK63_01410 molecular chaperone K12519 papD; chaperone protein PapD D AFK63_14950 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AFK63_19030 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AFK63_13715 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AFK63_16985 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AFK63_13710 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AFK63_16370 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AFK63_14955 secretion protein K13301 secM; secretion monitor D AFK63_00495 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AFK63_03180 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AFK63_19720 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D AFK63_13720 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AFK63_18320 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D AFK63_17125 preprotein translocase subunit SecA K03116 tatA; sec-independent protein translocase protein TatA D AFK63_17120 preprotein translocase K03117 tatB; sec-independent protein translocase protein TatB D AFK63_17115 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D AFK63_12920 tatE; preprotein translocase subunit SecE K03425 tatE; sec-independent protein translocase protein TatE C 02042 Bacterial toxins [BR:cmw02042] D AFK63_01365 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D AFK63_03170 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D AFK63_02335 hemolysin K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:cmw02022] D AFK63_13765 phoR; phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AFK63_13770 transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D AFK63_10750 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AFK63_10745 transcriptional regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D AFK63_00070 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AFK63_00065 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D AFK63_09375 sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D AFK63_09360 transcriptional regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D AFK63_19050 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D AFK63_19055 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D AFK63_15380 histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D AFK63_15385 transcriptional regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D AFK63_05285 histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D AFK63_05280 transcriptional regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D AFK63_16415 sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D AFK63_16410 XRE family transcriptional regulator K07771 basR; two-component system, OmpR family, response regulator BasR D AFK63_10430 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AFK63_10425 transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AFK63_12645 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D AFK63_12650 transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D AFK63_16565 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D AFK63_15370 TorR family transcriptional regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D AFK63_04745 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D AFK63_04740 transcriptional regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D AFK63_19105 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D AFK63_19100 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D AFK63_07325 nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D AFK63_07320 transcriptional regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D AFK63_03845 transcriptional regulator NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D AFK63_04795 histidine kinase K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D AFK63_04805 phosphotransfer intermediate protein in two-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D AFK63_04800 transcriptional regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D AFK63_02710 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D AFK63_06025 sirA; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D AFK63_01750 histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D AFK63_01745 dpiA; two-component response regulator DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB D AFK63_04190 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D AFK63_05215 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D AFK63_04185 LytTR family transcriptional regulator K02477 K02477; two-component system, LytTR family, response regulator D AFK63_05220 transcriptional regulator K02477 K02477; two-component system, LytTR family, response regulator D AFK63_18705 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AFK63_18700 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D AFK63_03445 histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D AFK63_03455 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D AFK63_06175 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AFK63_06230 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AFK63_06225 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AFK63_10325 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AFK63_07400 response regulator of RpoS K02485 rssB; two-component system, response regulator C 02035 Bacterial motility proteins [BR:cmw02035] D AFK63_06175 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AFK63_06180 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AFK63_06220 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AFK63_06225 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AFK63_06230 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AFK63_06235 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ D AFK63_10325 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AFK63_01250 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_17570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_13395 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_05225 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_10725 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_02910 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_07270 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AFK63_08685 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D AFK63_15665 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D AFK63_01310 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D AFK63_01470 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D AFK63_01855 methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D AFK63_16025 chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D AFK63_06210 chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D AFK63_09040 hypothetical protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D AFK63_08325 chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D AFK63_09150 methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D AFK63_16030 aerotaxis receptor Aer K03776 aer; aerotaxis receptor D AFK63_05855 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D AFK63_05850 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AFK63_05845 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ D AFK63_05820 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D AFK63_05815 fliP; flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AFK63_05810 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AFK63_05805 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AFK63_06255 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AFK63_06250 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D AFK63_06260 flagellar protein flhE K03516 flhE; flagellar protein FlhE D AFK63_05860 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D AFK63_05830 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AFK63_05825 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AFK63_05865 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AFK63_10995 flgI; flagellar biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI D AFK63_11035 flagellar biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D AFK63_11000 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D AFK63_05835 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D AFK63_05870 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D AFK63_05840 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D AFK63_11030 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D AFK63_11025 flgC; flagellar biosynthesis protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D AFK63_11020 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D AFK63_11010 flgF; flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D AFK63_11005 flgG; flagellar biosynthesis protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D AFK63_10990 flgJ; flagellar biosynthesis protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D AFK63_11015 flgE; flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE D AFK63_10985 flgK; flagellar biosynthesis protein FlgK K02396 flgK; flagellar hook-associated protein 1 D AFK63_10980 flgL; flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D AFK63_11045 flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D AFK63_05920 flagellin K02406 fliC; flagellin D AFK63_11945 flagellin K02406 fliC; flagellin D AFK63_05915 flagellar cap protein FliD K02407 fliD; flagellar hook-associated protein 2 D AFK63_05910 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D AFK63_05905 flagellar biosynthesis protein FliT K02423 fliT; flagellar protein FliT D AFK63_06155 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D AFK63_06160 transcriptional regulator K02402 flhC; flagellar transcriptional activator FlhC D AFK63_05985 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D AFK63_06165 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AFK63_06170 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D AFK63_05995 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D AFK63_05990 flagella biosynthesis protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D AFK63_11040 Negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM D AFK63_02140 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D AFK63_12185 ferrous iron transporter B K07345 fimA; major type 1 subunit fimbrin (pilin) D AFK63_06195 sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein D AFK63_12195 fimbrial assembly protein K07347 fimD; outer membrane usher protein D AFK63_11190 hypothetical protein K07347 fimD; outer membrane usher protein D AFK63_06200 fimbrial assembly protein K07347 fimD; outer membrane usher protein D AFK63_12205 hypothetical protein K07349 fimG; minor fimbrial subunit D AFK63_06205 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AFK63_06190 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AFK63_06185 polyketide synthase K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cmw04812] D AFK63_16715 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AFK63_14965 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AFK63_14970 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D AFK63_06975 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D AFK63_06970 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD D AFK63_06965 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D AFK63_06475 ATPase K03496 parA; chromosome partitioning protein D AFK63_06435 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cmw04147] D AFK63_13310 heat-shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D AFK63_00955 histidine kinase K04079 HSP90A; molecular chaperone HtpG D AFK63_02735 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AFK63_14210 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AFK63_10260 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AFK63_02230 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AFK63_09900 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AFK63_06675 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AFK63_00225 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D AFK63_14235 peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AFK63_01055 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AFK63_15310 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AFK63_00700 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AFK63_03665 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AFK63_16990 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AFK63_00370 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AFK63_10870 purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AFK63_08665 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D AFK63_09425 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D AFK63_06955 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AFK63_05970 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AFK63_02410 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AFK63_13305 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AFK63_13330 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D AFK63_17535 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AFK63_17540 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AFK63_13175 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D AFK63_01475 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AFK63_12405 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D AFK63_19875 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D AFK63_17660 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D AFK63_18710 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AFK63_13910 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AFK63_02265 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AFK63_16860 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AFK63_14860 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AFK63_06685 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AFK63_17900 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AFK63_12415 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AFK63_01090 hypothetical protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:cmw02048] D AFK63_14825 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D AFK63_14820 CRISPR-associated protein Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D AFK63_14815 CRISPR-associated protein K19127 csy1; CRISPR-associated protein Csy1 D AFK63_14810 CRISPR-associated protein K19128 csy2; CRISPR-associated protein Csy2 D AFK63_14805 CRISPR-associated protein Cas5 K19129 csy3; CRISPR-associated protein Csy3 D AFK63_14800 CRISPR-associated protein Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] D AFK63_04875 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D AFK63_04870 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D AFK63_04865 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D AFK63_00155 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D AFK63_10615 DNA adenine methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D AFK63_05755 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AFK63_10645 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AFK63_07860 DNAse K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D AFK63_10570 HNH nuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D AFK63_00950 Hok/gef cell toxic protein K18920 hokA; protein HokA D AFK63_13965 protein hokB K18921 hokB; protein HokB D AFK63_00945 Hok/gef cell toxic protein K18921 hokB; protein HokB D AFK63_15770 endoribonuclease K19048 symE; toxic protein SymE D AFK63_18200 toxic peptide TisB K19148 tisB; small toxic protein TisB D AFK63_03950 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D AFK63_13370 transcriptional regulator K05839 hha; haemolysin expression modulating protein D AFK63_13365 Hha toxicity attenuator K19162 tomB; hha toxicity modulator TomB D AFK63_07730 transcriptional regulator K03973 pspC; phage shock protein C D AFK63_07725 pspB; phage-shock protein K03970 pspB; phage shock protein B D AFK63_19610 addiction module antitoxin K19092 parE1_3_4; toxin ParE1/3/4 D AFK63_19795 toxin K07341 doc; death on curing protein D AFK63_19790 antitoxin K19165 phd; antitoxin Phd D AFK63_03700 plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1 D AFK63_15965 toxin-antitoxin biofilm protein TabA K19334 tabA; biofilm protein TabA D AFK63_11095 bssS; transcriptional regulator K12148 bssS; biofilm regulator BssS D AFK63_10825 multiple stress resistance protein BhsA K12151 bhsA; multiple stress resistance protein BhsA D AFK63_14965 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AFK63_16715 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AFK63_02100 DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AFK63_02035 DNA topoisomerase IV K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AFK63_04125 gltX; glutamine--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AFK63_02350 hypothetical protein K19168 cptA; toxin CptA D AFK63_02345 hypothetical protein K09159 cptB; antitoxin CptB D AFK63_03520 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides [BR:cmw04052] D AFK63_00285 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:cmw01504] D AFK63_10065 GCN5-related N-acetyltransferase K18815 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82] D AFK63_18330 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D AFK63_11955 multidrug transporter K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D AFK63_10430 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AFK63_10425 transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AFK63_10750 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AFK63_10745 transcriptional regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D AFK63_13355 multidrug transporter K03585 acrA; membrane fusion protein, multidrug efflux system D AFK63_13360 multidrug transporter K18138 acrB; multidrug efflux pump D AFK63_08240 transporter K18139 oprM; outer membrane protein, multidrug efflux system D AFK63_06535 OprM K18139 oprM; outer membrane protein, multidrug efflux system D AFK63_07070 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D AFK63_13245 transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D AFK63_08820 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D AFK63_16790 transcriptional regulator K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor D AFK63_16795 multidrug transporter K18141 acrE; membrane fusion protein, multidrug efflux system D AFK63_16800 multidrug transporter K18142 acrF; multidrug efflux pump D AFK63_02010 hypothetical protein K12340 tolC; outer membrane protein D AFK63_08645 transcriptional regulator K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D AFK63_11530 porin K09476 ompF; outer membrane pore protein F C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cmw00537] D AFK63_08730 treF; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D AFK63_07105 treA; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D AFK63_14235 peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins [BR:cmw03200] D AFK63_10595 lysozyme K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cmw03100] D AFK63_14440 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AFK63_17040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AFK63_17485 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AFK63_04140 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AFK63_04145 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AFK63_02970 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AFK63_02980 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AFK63_02975 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AFK63_02985 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AFK63_17315 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AFK63_04300 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AFK63_13125 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AFK63_05625 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AFK63_05665 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AFK63_05645 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AFK63_05685 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AFK63_14370 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AFK63_17470 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AFK63_14425 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AFK63_06045 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D AFK63_12760 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AFK63_12765 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AFK63_12775 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AFK63_12780 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AFK63_00610 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AFK63_16850 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AFK63_03270 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AFK63_18635 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AFK63_01140 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AFK63_06040 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AFK63_01145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AFK63_01150 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AFK63_02390 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AFK63_17000 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AFK63_17310 tRNA-His K14226 tRNA-His; tRNA His D AFK63_14445 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AFK63_17490 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AFK63_17045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AFK63_12755 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_15825 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_06050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_15570 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_15580 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_15575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_17305 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_16365 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AFK63_04105 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AFK63_12460 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AFK63_12445 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AFK63_12450 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AFK63_12470 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AFK63_12455 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AFK63_02615 tRNA-Met K14230 tRNA-Met; tRNA Met D AFK63_02620 tRNA-Met K14230 tRNA-Met; tRNA Met D AFK63_16360 tRNA-Met K14230 tRNA-Met; tRNA Met D AFK63_12770 tRNA-Met K14230 tRNA-Met; tRNA Met D AFK63_12750 tRNA-Met K14230 tRNA-Met; tRNA Met D AFK63_01905 tRNA-Met K14230 tRNA-Met; tRNA Met D AFK63_01015 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AFK63_01730 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AFK63_04900 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AFK63_19440 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AFK63_17300 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AFK63_11360 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AFK63_05695 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AFK63_02965 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AFK63_11205 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AFK63_11215 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AFK63_14300 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AFK63_16835 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AFK63_16995 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AFK63_17010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AFK63_17465 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AFK63_07385 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AFK63_07380 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AFK63_17005 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AFK63_09640 tRNA-Val K14237 tRNA-Val; tRNA Val D AFK63_04110 tRNA-Val K14237 tRNA-Val; tRNA Val D AFK63_12465 tRNA-Val K14237 tRNA-Val; tRNA Val D AFK63_04120 tRNA-Val K14237 tRNA-Val; tRNA Val D AFK63_04115 tRNA-Val K14237 tRNA-Val; tRNA Val D AFK63_09645 tRNA-Val K14237 tRNA-Val; tRNA Val D AFK63_19240 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D AFK63_00605 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_18630 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_16855 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_03265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_14450 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_17050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_17495 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AFK63_17035 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_17480 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_14435 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_16845 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_00615 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_03275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_18640 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AFK63_00620 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_17030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_14430 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_16830 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_18645 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_16840 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_17475 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_03280 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AFK63_19940 bacterial RNase P K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D AFK63_01610 dkgA; 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D AFK63_14420 dkgB; 2,5-diketo-D-gluconic acid reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D AFK63_03960 oxidoreductase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-] D AFK63_04170 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D AFK63_01680 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D AFK63_11985 oxidoreductase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D AFK63_13665 oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D AFK63_16050 fadH; 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D AFK63_09085 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D AFK63_14245 pyrroloquinoline quinone biosynthesis protein PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D AFK63_11100 solA; N-methyltryptophan oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-] D AFK63_00825 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AFK63_07050 NADPH:quinone oxidoreductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D AFK63_02095 NADPH quinone reductase MdaB K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D AFK63_08225 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D AFK63_13010 alkyl hydroperoxide reductase K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D AFK63_01375 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D AFK63_10255 methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D AFK63_04530 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D AFK63_01000 S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D AFK63_16145 glutathionyl-hydroquinone reductase YqjG K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D AFK63_16730 TMAO reductase K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D AFK63_08290 cytochrome B K12262 cybB; superoxide oxidase [EC:1.10.3.17] D AFK63_08970 Mn-containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D AFK63_10080 catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D AFK63_08815 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D AFK63_03780 bcp; thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D AFK63_08065 tpx; peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D AFK63_13015 alkyl hydroperoxide reductase K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D AFK63_15635 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D AFK63_19430 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D AFK63_04025 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D AFK63_19845 quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D AFK63_03465 dihydropteridine reductase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D AFK63_18355 ornithine monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196] D AFK63_16015 FMN reductase K07229 yqjH; ferric-chelate reductase (NADPH) [EC:1.16.1.9] D AFK63_06065 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D AFK63_14795 copper oxidase K14588 cueO; cuproxidase [EC:1.16.3.4] D AFK63_17885 ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D AFK63_04850 NADH:flavorubredoxin oxidoreductase K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-] D AFK63_07990 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D AFK63_03765 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D AFK63_14255 pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D AFK63_01550 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D AFK63_07650 pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D AFK63_11675 pflA; pyruvate formate lyase-activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D AFK63_11780 HCP oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-] D AFK63_02840 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D AFK63_09610 cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D AFK63_08370 tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D AFK63_11145 opgC; glucans biosynthesis protein K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-] D AFK63_02075 malonate decarboxylase subunit epsilon K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39] D AFK63_13375 maltose acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D AFK63_08960 N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D AFK63_12810 lnt; apolipoprotein acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D AFK63_16280 acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D AFK63_19410 acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D AFK63_08040 MarR family transcriptional regulator K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D AFK63_15940 acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D AFK63_08670 GCN5 family acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D AFK63_09095 acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D AFK63_11725 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D AFK63_08025 glycosyl hydrolase family 65 K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230] D AFK63_07740 sugar phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352] D AFK63_02045 triphosphoribosyl-dephospho-CoA synthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D AFK63_03315 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D AFK63_02560 diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D AFK63_17840 sugar kinase K18673 bglK; beta-glucoside kinase [EC:2.7.1.85] D AFK63_04815 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D AFK63_18750 sugar kinase K18478 yihV; sulfofructose kinase [EC:2.7.1.184] D AFK63_00180 fructoselysine kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218] D AFK63_09975 transcriptional regulator K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D AFK63_01970 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D AFK63_16035 diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D AFK63_02070 phosphoribosyl-dephospho-CoA transferase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D AFK63_09985 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D AFK63_15650 phosphoglycerol transferase I K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20] D AFK63_00640 aceK; isocitrate dehydrogenase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D AFK63_11320 arylsulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22] D AFK63_11155 RNase III inhibitor K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D AFK63_13055 enterobactin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108] D AFK63_08350 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D AFK63_12505 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AFK63_06755 serine/threonine protein phosphatase K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16] D AFK63_09310 sugar phosphatase K07757 ybiV; sugar-phosphatase [EC:3.1.3.23] D AFK63_07555 S-adenosylmethionine tRNA ribosyltransferase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D AFK63_04380 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D AFK63_04965 phage resistance protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D AFK63_00890 hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D AFK63_13420 hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D AFK63_04150 hypothetical protein K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D AFK63_03725 c-di-GMP phosphodiesterase K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D AFK63_19520 biofilm formation regulator HmsP K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D AFK63_02175 DNA endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D AFK63_17110 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D AFK63_10885 DNAse K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D AFK63_15530 deoxyribonuclease YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D AFK63_12675 acyl-CoA esterase K01175 ybfF; esterase [EC:3.1.-.-] D AFK63_14325 frsA; fermentation/respiration switch protein K11750 frsA; esterase FrsA [EC:3.1.-.-] D AFK63_19510 endo-1,4-D-glucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4] D AFK63_07845 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D AFK63_15865 muraminidase K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D AFK63_15745 galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D AFK63_06270 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D AFK63_19250 alpha-glucosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D AFK63_11860 glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180] D AFK63_18730 alpha-xylosidase K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199] D AFK63_12965 oligo-1,6-glucosidase K26289 palQ; palatinase [EC:3.2.1.219] D AFK63_00560 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D AFK63_12925 hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D AFK63_02330 valyl-tRNA synthetase K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135] D AFK63_16005 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D AFK63_00190 frlB; fructoselysine-6-P-deglycase K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-] D AFK63_01965 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25] D AFK63_05410 GDP-mannose mannosyl hydrolase K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-] D AFK63_13515 thiamin pyrimidine pyrophosphate hydrolase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-] D AFK63_03850 GDP-mannose pyrophosphatase K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-] D AFK63_10950 septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D AFK63_18580 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D AFK63_08875 UV damage repair endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-] D AFK63_02055 malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D AFK63_02060 malonate decarboxylase subunit gamma K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87] D AFK63_14075 phenolic acid decarboxylase K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-] D AFK63_18740 aldolase K01671 yihT; sulfofructosephosphate aldolase [EC:4.1.2.57] D AFK63_07655 fructose-6-phosphate aldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-] D AFK63_01160 carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D AFK63_02640 cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-] D AFK63_17750 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D AFK63_00185 fructoselysine 3-epimerase K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41] D AFK63_18735 sugar isomerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31] D AFK63_01480 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D AFK63_09460 rnfD; electron transporter RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D AFK63_09455 electron transporter RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D AFK63_09450 electron transporter RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D AFK63_19695 zntA; zinc ABC transporter ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D AFK63_14720 transcriptional regulator K06206 sfsA; sugar fermentation stimulation protein A D AFK63_14115 protein iolH K06605 iolH; myo-inositol catabolism protein IolH D AFK63_09960 beta-D-glucoside glucohydrolase K17641 bxlA; beta-xylosidase C 99982 Energy metabolism D AFK63_17790 formate dehydrogenase K02379 fdhD; FdhD protein D AFK63_04770 2Fe-2S ferredoxin K11107 yfaE; ferredoxin D AFK63_09465 electron transporter RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D AFK63_09470 elongation factor G K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D AFK63_09445 electron transporter RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D AFK63_09775 formate dehydrogenase K05796 hydN; electron transport protein HydN D AFK63_18560 FMN-binding protein K06205 mioC; MioC protein D AFK63_02355 flavodoxin FldB K03840 fldB; flavodoxin II D AFK63_03525 scaffolding protein K04488 iscU; nitrogen fixation protein NifU and related proteins D AFK63_01500 cytochrome b562 K15536 cybC; soluble cytochrome b562 D AFK63_09820 formate hydrogenlyase K15827 hycB; formate hydrogenlyase subunit 2 D AFK63_09815 formate hydrogenlyase subunit 3 K15828 hycC; formate hydrogenlyase subunit 3 D AFK63_09810 hycD; hydrogenase 3 membrane subunit K15829 hycD; formate hydrogenlyase subunit 4 D AFK63_09805 hycE; hydrogenase 3 large subunit K15830 hycE; formate hydrogenlyase subunit 5 D AFK63_09800 formate hydrogenlyase complex iron-sulfur subunit K15831 hycF; formate hydrogenlyase subunit 6 D AFK63_09795 formate hydrogenlyase K15832 hycG; formate hydrogenlyase subunit 7 D AFK63_04845 nitric oxide reductase K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D AFK63_12685 flavodoxin FldA K03839 fldA; flavodoxin I C 99983 Lipid metabolism D AFK63_01245 isovaleryl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism D AFK63_03060 nrdI; ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D AFK63_04080 sulfate transporter K06203 cysZ; CysZ protein D AFK63_14525 lyase K08234 yaeR; glyoxylase I family protein D AFK63_08075 murein peptide amidase A K14054 mpaA; murein peptide amidase A D AFK63_02135 hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D AFK63_05385 wcaD; colanic acid biosynthesis protein K13620 wcaD; putative colanic acid polymerase D AFK63_05450 wcaM; colanic acid biosynthesis protein K16711 wcaM; colanic acid biosynthesis protein WcaM D AFK63_07615 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D AFK63_07620 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B D AFK63_12270 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D AFK63_19505 cellulose synthase K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D AFK63_17290 protoheme IX biogenesis protein K02498 hemY; HemY protein D AFK63_17130 ubiB; ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein D AFK63_17135 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D AFK63_01980 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D AFK63_16285 hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D AFK63_18650 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D AFK63_02110 cell division protein FtsI K04753 sufI; suppressor of ftsI D AFK63_18445 hypothetical protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D AFK63_11785 GntR family transcriptional regulator K15977 K15977; putative oxidoreductase D AFK63_16140 hypothetical protein K15977 K15977; putative oxidoreductase D AFK63_03815 hydrolase K06999 K06999; phospholipase/carboxylesterase D AFK63_03310 protein acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D AFK63_16655 hypothetical protein K03623 yhcO; ribonuclease inhibitor D AFK63_00010 cold-shock protein K03704 cspA; cold shock protein D AFK63_12935 cold-shock protein K03704 cspA; cold shock protein D AFK63_10335 cold-shock protein K03704 cspA; cold shock protein D AFK63_06830 cold-shock protein K03704 cspA; cold shock protein D AFK63_11745 transcriptional regulator K03704 cspA; cold shock protein D AFK63_16900 anti-sigma factor K07740 rsd; regulator of sigma D D AFK63_09825 transcriptional regulator K15833 hycA; formate hydrogenlyase regulatory protein HycA D AFK63_09790 formate hydrogenlyase maturation protein HycH K15834 hycH; formate hydrogenlyase maturation protein HycH D AFK63_13470 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D AFK63_00055 transcription accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D AFK63_08195 heat-inducible protein K03668 hslJ; heat shock protein HslJ D AFK63_11740 clpS; Clp protease ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D AFK63_13570 trigger factor K03545 tig; trigger factor D AFK63_16735 sulfite oxidase subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D AFK63_17815 formate dehydrogenase K02380 fdhE; FdhE protein D AFK63_03135 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D AFK63_09840 hydrogenase assembly chaperone K04653 hypC; hydrogenase expression/formation protein HypC D AFK63_09845 hydrogenase isoenzyme formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D AFK63_09850 carbamoyl dehydratase HypE K04655 hypE; hydrogenase expression/formation protein HypE D AFK63_09765 carbamoyl phosphate phosphatase K04656 hypF; hydrogenase maturation protein HypF D AFK63_03065 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH D AFK63_17450 ATP-dependent protease K07391 comM; magnesium chelatase family protein D AFK63_00255 hypothetical protein K07397 yhfA; putative redox protein D AFK63_00015 Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D AFK63_19155 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor D AFK63_04890 glutathione S-transferase K11208 yncG; GST-like protein C 99976 Replication and repair D AFK63_13450 cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D AFK63_02665 endonuclease K01146 xni; protein Xni D AFK63_06420 DNA repair protein RadC K03630 radC; DNA repair protein RadC D AFK63_18900 hypothetical protein K03630 radC; DNA repair protein RadC D AFK63_17145 recombinase RmuC K09760 rmuC; DNA recombination protein RmuC D AFK63_11765 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D AFK63_16240 hypothetical protein K07460 yraN; putative endonuclease D AFK63_16275 hypothetical protein K07461 K07461; putative endonuclease D AFK63_00565 DNA processing protein DprA K04096 smf; DNA processing protein D AFK63_05600 DNA gyrase inhibitor K07470 sbmC; DNA gyrase inhibitor D AFK63_10565 terminase K07474 xtmA; phage terminase small subunit D AFK63_11690 recombination factor protein RarA K07478 ycaJ; putative ATPase D AFK63_19190 DNA primase K06919 K06919; putative DNA primase/helicase C 99979 Viral proteins C 99998 Others D AFK63_07720 phage-shock protein K03969 pspA; phage shock protein A D AFK63_07735 phage-shock protein K03971 pspD; phage shock protein D D AFK63_13320 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D AFK63_04305 hypothetical protein K21990 yfdC; formate-nitrite transporter family protein D AFK63_18720 sugar transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AFK63_18725 hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AFK63_09265 arabinoside transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AFK63_19245 transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AFK63_14885 permease K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AFK63_17825 permease K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AFK63_09965 symporter YagG K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AFK63_17320 D-alanine/D-serine/glycine permease K03293 TC.AAT; amino acid transporter, AAT family D AFK63_09480 tppB; peptide ABC transporter permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D AFK63_15335 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D AFK63_13760 branched-chain amino acid ABC transporter substrate-binding protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D AFK63_00665 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D AFK63_11245 nucleoside permease K03317 TC.CNT; concentrative nucleoside transporter, CNT family D AFK63_15525 nucleoside transporter NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family D AFK63_11915 transporter K07085 K07085; putative transport protein D AFK63_05240 nickel/cobalt efflux protein RcnB K23243 rcnB; nickel/cobalt homeostasis protein C 99978 Cell growth D AFK63_07505 intracellular septation protein A K06190 ispZ; intracellular septation protein D AFK63_19665 hypothetical protein K27311 dcrB; inner membrane lipoprotein DcrB D AFK63_01305 iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D AFK63_10140 cell division modulator K15722 cedA; cell division activator D AFK63_19010 AmiB activator K22719 envC; murein hydrolase activator C 99993 Cell motility D AFK63_10860 penicillin-binding protein K07337 K07337; penicillin-binding protein activator D AFK63_08935 TfoX-like protein K07343 tfoX; DNA transformation protein and related proteins D AFK63_11420 competence protein K07343 tfoX; DNA transformation protein and related proteins D AFK63_02690 secretion protein K15723 syd; SecY interacting protein Syd D AFK63_09780 glycogen synthase K22720 glgS; surface composition regulator C 99995 Signaling proteins D AFK63_14895 transcriptional regulator K03807 ampE; AmpE protein D AFK63_06790 prop expression regulator K03607 proQ; ProP effector D AFK63_19620 universal stress global response regulator UspA K06149 uspA; universal stress protein A D AFK63_06150 universal stress protein UspC K14064 uspC; universal stress protein C D AFK63_09330 universal stress protein UspE K14055 uspE; universal stress protein E D AFK63_13005 universal stress protein UspG K11932 uspG; universal stress protein G D AFK63_03935 carbon starvation protein A K06200 cstA; carbon starvation protein D AFK63_18715 GTP-binding protein TypA K06207 typA; GTP-binding protein D AFK63_18120 hypothetical protein K07169 K07169; FHA domain-containing protein D AFK63_12795 nucleoside triphosphate hydrolase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D AFK63_11225 hypothetical protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D AFK63_10275 serine/threonine protein kinase K07180 prkA; serine protein kinase D AFK63_01960 hypothetical protein K07184 ygiM; SH3 domain protein D AFK63_15495 hypothetical protein K07186 smp; membrane protein D AFK63_08640 hypothetical protein K13630 marB; multiple antibiotic resistance protein MarB D AFK63_13630 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D AFK63_11695 lolA; lipoprotein chaperone K03634 lolA; outer membrane lipoprotein carrier protein D AFK63_07215 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D AFK63_04355 ABC transporter permease K04754 mlaA; phospholipid-binding lipoprotein MlaA D AFK63_17375 lipopolysaccharide biosynthesis protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE D AFK63_09515 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB D AFK63_14575 molecular chaperone K06142 hlpA; outer membrane protein D AFK63_02845 nlpD; lipoprotein NlpD K06194 nlpD; lipoprotein NlpD D AFK63_02385 hypothetical protein K12943 ygeR; lipoprotein YgeR D AFK63_16320 lipoprotein NlpI K05803 nlpI; lipoprotein NlpI D AFK63_15440 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein D AFK63_15435 capsule biosynthesis protein K07266 kpsC; capsular polysaccharide export protein D AFK63_07520 hypothetical protein K07275 ompW; outer membrane protein D AFK63_10095 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein D AFK63_06950 hypothetical protein K07285 slp; outer membrane lipoprotein D AFK63_13580 hypothetical protein K07286 yajG; uncharacterized lipoprotein D AFK63_05345 assembly protein K07289 asmA; AsmA protein D AFK63_19545 hypothetical protein K07290 yhjG; AsmA family protein D AFK63_13230 hypothetical protein K07340 ybbJ; inner membrane protein D AFK63_07635 hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB D AFK63_10150 transcriptional regulator K04064 osmE; osmotically inducible lipoprotein OsmE D AFK63_15375 hypothetical protein K06143 creD; inner membrane protein D AFK63_04330 cytochrome C biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D AFK63_04345 cytochrome C K02200 ccmH; cytochrome c-type biogenesis protein CcmH D AFK63_03615 cytoskeletal protein RodZ K15539 rodZ; cytoskeleton protein RodZ D AFK63_16675 transporter K21695 aaeX; protein AaeX C 99994 Others D AFK63_18465 transcriptional regulator PhoU K02039 phoU; phosphate transport system protein D AFK63_06110 ferritin K02255 ftnB; ferritin-like protein 2 D AFK63_11140 mdoG; glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D AFK63_01030 cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D AFK63_06305 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D AFK63_15170 apaG; heavy metal transporter K06195 apaG; ApaG protein D AFK63_17265 cyaY; frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY D AFK63_10410 copper resistance protein CopB K07233 pcoB; copper resistance protein B D AFK63_07275 hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur B B 09194 Poorly characterized C 99996 General function prediction only D AFK63_04475 colicin V production protein K03558 cvpA; membrane protein required for colicin V production D AFK63_10600 endolysin K03791 K03791; putative chitinase D AFK63_19265 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase K03796 bax; Bax protein D AFK63_11455 paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B D AFK63_11055 virulence factor MviM K03810 mviM; virulence factor D AFK63_04680 acyltransferase K02348 elaA; ElaA protein D AFK63_03300 hypothetical protein K05811 yfiM; putative lipoprotein D AFK63_07255 chaB; cation transport regulator K06197 chaB; cation transport regulator D AFK63_15540 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein D AFK63_11175 hydrolase K04477 ycdX; putative hydrolase D AFK63_14240 pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D AFK63_14250 pyrroloquinoline quinone biosynthesis protein PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D AFK63_03335 autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor D AFK63_14670 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D AFK63_09940 sufA; iron-sulfur cluster assembly scaffold protein K05997 sufA; Fe-S cluster assembly protein SufA D AFK63_09935 cysteine desulfurase K09014 sufB; Fe-S cluster assembly protein SufB D AFK63_09925 cysteine desulfurase K09015 sufD; Fe-S cluster assembly protein SufD D AFK63_10130 hypothetical protein K07038 K07038; inner membrane protein D AFK63_18765 hypothetical protein K07058 K07058; membrane protein D AFK63_19555 hypothetical protein K07058 K07058; membrane protein D AFK63_01045 fxsA; suppressor FxsA K07113 fxsA; UPF0716 protein FxsA D AFK63_09915 cysteine desufuration protein SufE K02426 sufE; cysteine desulfuration protein SufE D AFK63_02635 Fe-S metabolism protein SufE K02426 sufE; cysteine desulfuration protein SufE D AFK63_11115 sulfurtransferase K07146 K07146; UPF0176 protein D AFK63_10735 lysogenization regulator K07153 hflD; high frequency lysogenization protein D AFK63_07995 NADPH-dependent FMN reductase K11811 arsH; arsenical resistance protein ArsH D AFK63_11125 secY/secA suppressor protein K12147 msyB; acidic protein MsyB D AFK63_15595 iron reductase K13255 fhuF; ferric iron reductase protein FhuF D AFK63_00325 lysis protein K03745 slyX; SlyX protein D AFK63_00570 hypothetical protein K03747 smg; Smg protein D AFK63_15390 hypothetical protein K05805 creA; CreA protein D AFK63_02180 hypothetical protein K02742 sprT; SprT protein D AFK63_04470 cell division protein DedD K03749 dedD; DedD protein D AFK63_00150 cell division protein DamX K03112 damX; DamX protein D AFK63_05095 vancomycin high temperature exclusion protein K03748 sanA; SanA protein D AFK63_04455 hypothetical protein K03975 dedA; membrane-associated protein D AFK63_11460 paraquat-inducible protein K03808 pqiA; paraquat-inducible protein A D AFK63_06780 hypothetical protein K03808 pqiA; paraquat-inducible protein A D AFK63_04685 protein ElaB K05594 elaB; ElaB protein D AFK63_18225 hypothetical protein K00389 yidH; putative membrane protein D AFK63_04720 hypothetical protein K08984 yjdF; putative membrane protein D AFK63_01715 hypothetical protein K08984 yjdF; putative membrane protein D AFK63_13100 hypothetical protein K08987 K08987; putative membrane protein D AFK63_01230 hypothetical protein K08989 K08989; putative membrane protein D AFK63_08055 hypothetical protein K08990 ycjF; putative membrane protein D AFK63_19710 hypothetical protein K08993 yhhL; putative membrane protein D AFK63_04895 hypothetical protein K08995 K08995; putative membrane protein D AFK63_07395 hypothetical protein K09858 K09858; SEC-C motif domain protein D AFK63_13455 hypothetical protein K09914 K09914; putative lipoprotein D AFK63_08830 cupin K11312 K11312; cupin 2 domain-containing protein D AFK63_00760 maltose-binding protein K05775 malM; maltose operon periplasmic protein D AFK63_13800 AroM protein K14591 aroM; protein AroM D AFK63_00975 hypothetical protein K06193 phnA; protein PhnA C 99997 Function unknown D AFK63_18015 Accessory protein K06867 K06867; uncharacterized protein D AFK63_18070 Accessory protein K06867 K06867; uncharacterized protein D AFK63_11335 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein D AFK63_02755 hypothetical protein K06872 K06872; uncharacterized protein D AFK63_08115 stress-induced protein K06884 K06884; uncharacterized protein D AFK63_08575 stress-induced protein K06884 K06884; uncharacterized protein D AFK63_01265 esterase K06889 K06889; uncharacterized protein D AFK63_12275 hypothetical protein K06890 K06890; uncharacterized protein D AFK63_08050 hypothetical protein K06918 K06918; uncharacterized protein D AFK63_11395 hypothetical protein K06929 K06929; uncharacterized protein D AFK63_09550 oxidoreductase K06938 K06938; uncharacterized protein D AFK63_07515 ferredoxin K06940 K06940; uncharacterized protein D AFK63_05005 hypothetical protein K06940 K06940; uncharacterized protein D AFK63_05750 hydrolase K06950 K06950; uncharacterized protein D AFK63_10135 L-cystine transporter tcyP K06956 K06956; uncharacterized protein D AFK63_02030 esterase K07000 K07000; uncharacterized protein D AFK63_10845 hypothetical protein K07000 K07000; uncharacterized protein D AFK63_04905 hypothetical protein K07014 K07014; uncharacterized protein D AFK63_00270 hydrolase K07019 K07019; uncharacterized protein D AFK63_15315 hypothetical protein K07034 K07034; uncharacterized protein D AFK63_07175 hypothetical protein K07039 K07039; uncharacterized protein D AFK63_03805 hypothetical protein K07054 K07054; uncharacterized protein D AFK63_00315 hypothetical protein K07070 K07070; uncharacterized protein D AFK63_04525 epimerase K07071 K07071; uncharacterized protein D AFK63_00685 nucleotidyltransferase K07074 K07074; uncharacterized protein D AFK63_16255 hypothetical protein K07089 K07089; uncharacterized protein D AFK63_04405 hypothetical protein K07090 K07090; uncharacterized protein D AFK63_14100 Tat pathway signal protein K07093 K07093; uncharacterized protein D AFK63_04540 phosphodiesterase K07095 K07095; uncharacterized protein D AFK63_01355 hypothetical protein K07109 K07109; uncharacterized protein D AFK63_01895 hypothetical protein K07109 K07109; uncharacterized protein D AFK63_05895 hypothetical protein K07112 K07112; uncharacterized protein D AFK63_16235 penicillin-binding protein K07121 K07121; uncharacterized protein D AFK63_06340 hypothetical protein K07136 K07136; uncharacterized protein D AFK63_16570 hypothetical protein K07139 K07139; uncharacterized protein D AFK63_11475 hypothetical protein K07140 K07140; MOSC domain-containing protein D AFK63_05070 hypothetical protein K07148 K07148; uncharacterized protein D AFK63_01735 hypothetical protein K07150 K07150; uncharacterized protein D AFK63_02125 hypothetical protein K09131 K09131; uncharacterized protein D AFK63_12900 hypothetical protein K09158 K09158; uncharacterized protein D AFK63_06990 hypothetical protein K09160 K09160; uncharacterized protein D AFK63_04580 hypothetical protein K09161 K09161; uncharacterized protein D AFK63_01320 hypothetical protein K09702 K09702; uncharacterized protein D AFK63_13820 hypothetical protein K09768 K09768; uncharacterized protein D AFK63_07485 hypothetical protein K09780 K09780; uncharacterized protein D AFK63_05770 hypothetical protein K09781 K09781; uncharacterized protein D AFK63_10280 hypothetical protein K09786 K09786; uncharacterized protein D AFK63_13335 hypothetical protein K09790 K09790; uncharacterized protein D AFK63_11600 hypothetical protein K09791 K09791; uncharacterized protein D AFK63_19005 hypothetical protein K09798 K09798; uncharacterized protein D AFK63_03145 hypothetical protein K09801 K09801; uncharacterized protein D AFK63_05610 hypothetical protein K09802 K09802; uncharacterized protein D AFK63_02250 hypothetical protein K09807 K09807; uncharacterized protein D AFK63_10320 virulence factor VirK K09824 virK; uncharacterized protein D AFK63_11760 hypothetical protein K09824 virK; uncharacterized protein D AFK63_11450 hypothetical protein K09857 K09857; uncharacterized protein D AFK63_15340 hypothetical protein K09861 K09861; uncharacterized protein D AFK63_14940 DNA gyrase inhibitor K09862 K09862; uncharacterized protein D AFK63_16880 hypothetical protein K09891 K09891; uncharacterized protein D AFK63_18690 GTPase activator K09894 K09894; uncharacterized protein D AFK63_02280 hypothetical protein K09895 K09895; uncharacterized protein D AFK63_18660 hypothetical protein K09896 K09896; uncharacterized protein D AFK63_17455 hypothetical protein K09897 K09897; uncharacterized protein D AFK63_00265 hypothetical protein K09898 K09898; uncharacterized protein D AFK63_04575 hypothetical protein K09899 K09899; uncharacterized protein D AFK63_07470 dsDNA-mimic protein K09901 K09901; uncharacterized protein D AFK63_06980 hypothetical protein K09902 K09902; uncharacterized protein D AFK63_04910 hypothetical protein K09904 K09904; uncharacterized protein D AFK63_06285 hypothetical protein K09907 K09907; uncharacterized protein D AFK63_16620 hypothetical protein K09908 K09908; uncharacterized protein D AFK63_14845 hypothetical protein K09910 K09910; uncharacterized protein D AFK63_11435 Ter macrodomain organizer matS-binding protein K09911 K09911; uncharacterized protein D AFK63_11060 hypothetical protein K09915 K09915; uncharacterized protein D AFK63_10250 hypothetical protein K09916 K09916; uncharacterized protein D AFK63_06890 hypothetical protein K09917 K09917; uncharacterized protein D AFK63_06705 LexA family transcriptional regulator K09918 K09918; uncharacterized protein D AFK63_02020 dehydrogenase K09920 K09920; uncharacterized protein D AFK63_17250 hypothetical protein K09921 K09921; uncharacterized protein D AFK63_01815 hypothetical protein K09923 K09923; uncharacterized protein D AFK63_11605 hypothetical protein K09927 K09927; uncharacterized protein D AFK63_01205 hypothetical protein K09937 K09937; uncharacterized protein D AFK63_13815 ABC transporter substrate-binding protein K09945 K09945; uncharacterized protein D AFK63_04095 hypothetical protein K09954 K09954; uncharacterized protein D AFK63_17830 hypothetical protein K09955 K09955; uncharacterized protein D AFK63_19340 urea carboxylase K09967 K09967; uncharacterized protein D AFK63_19345 urea carboxylase K09967 K09967; uncharacterized protein D AFK63_13255 conjugal transfer protein TraB K09973 K09973; uncharacterized protein D AFK63_10170 hypothetical protein K09975 K09975; uncharacterized protein D AFK63_08215 hypothetical protein K09978 K09978; uncharacterized protein D AFK63_16270 hypothetical protein K09979 K09979; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 11, 2024