+D GENES KO
#
KEGG Orthology (KO) - Desulfolithobacter dissulfuricans
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ddu00010]
D GF1_29010 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GF1_25920 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GF1_24120 pfk-1; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D GF1_12860 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GF1_13220 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GF1_27140 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GF1_25490 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GF1_27170 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GF1_27150 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GF1_04690 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GF1_02110 apgM; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GF1_10410 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GF1_27480 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GF1_21790 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D GF1_20380 por; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D GF1_14420 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D GF1_14430 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GF1_04630 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D GF1_25320 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GF1_15610 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D GF1_00980 xanA; phosphohexose mutases K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GF1_18450 pckA2; phosphoenolpyruvate carboxykinase [ATP] 2 K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:ddu00020]
D GF1_23850 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D GF1_05540 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D GF1_32410 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GF1_14420 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D GF1_14430 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GF1_14440 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D GF1_29600 hypothetical protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GF1_29590 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GF1_11240 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GF1_11230 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GF1_14310 fumB; fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D GF1_15220 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GF1_18450 pckA2; phosphoenolpyruvate carboxykinase [ATP] 2 K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D GF1_20380 por; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:ddu00030]
D GF1_25920 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GF1_11500 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GF1_11490 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D GF1_25930 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GF1_13670 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GF1_31900 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D GF1_10330 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GF1_00980 xanA; phosphohexose mutases K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GF1_13060 prsA_2; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GF1_11480 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D GF1_11470 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GF1_08000 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D GF1_13640 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D GF1_13220 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GF1_12860 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GF1_24120 pfk-1; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:ddu00040]
D GF1_10440 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GF1_14010 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GF1_25930 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GF1_19250 fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:ddu00051]
D GF1_00990 xanB; xanthan biosynthesis protein XanB K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D GF1_00980 xanA; phosphohexose mutases K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GF1_19250 fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D GF1_24120 pfk-1; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D GF1_12860 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GF1_13220 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GF1_27140 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GF1_10330 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:ddu00052]
D GF1_19540 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D GF1_21220 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GF1_24550 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GF1_14010 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GF1_00980 xanA; phosphohexose mutases K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GF1_29010 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GF1_24120 pfk-1; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism [PATH:ddu00053]
D GF1_10440 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GF1_13230 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:ddu00500]
D GF1_10930 sps; sucrose-phosphate synthase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14]
D GF1_10940 spsA; sucrose synthase K00695 SUS; sucrose synthase [EC:2.4.1.13]
D GF1_14010 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GF1_22940 glgC_1; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D GF1_18930 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D GF1_01300 glgX; glycogen operon protein GlgX homolog K01214 ISA; isoamylase [EC:3.2.1.68]
D GF1_00980 xanA; phosphohexose mutases K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GF1_29010 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GF1_25920 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ddu00520]
D GF1_07310 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D GF1_05950 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GF1_07050 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D GF1_03800 glucose-1-phosphate thymidylyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GF1_24240 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GF1_13170 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GF1_20640 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GF1_21520 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D GF1_00420 hypothetical protein K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D GF1_05330 UDP-N-acetylglucosamine C4 epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D GF1_09820 wbpA; UDP-N-acetyl-d-glucosamine 6-dehydrogenase WbpA K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D GF1_08720 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D GF1_29010 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GF1_00980 xanA; phosphohexose mutases K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GF1_14010 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GF1_10440 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GF1_19540 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D GF1_21220 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GF1_24550 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GF1_13230 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D GF1_25920 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GF1_00990 xanB; xanthan biosynthesis protein XanB K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D GF1_22940 glgC_1; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ddu00620]
D GF1_25320 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GF1_20380 por; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D GF1_14420 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D GF1_14430 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GF1_04630 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D GF1_27480 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GF1_02790 hypothetical protein K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GF1_24520 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D GF1_15610 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D GF1_06970 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D GF1_10840 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D GF1_15220 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GF1_14310 fumB; fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D GF1_18450 pckA2; phosphoenolpyruvate carboxykinase [ATP] 2 K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D GF1_21790 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D GF1_14530 hypothetical protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D GF1_17570 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ddu00630]
D GF1_25320 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GF1_15220 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GF1_23850 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D GF1_05540 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D GF1_29650 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D GF1_29670 acetyl/propionyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D GF1_29660 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D GF1_29620 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D GF1_29640 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D GF1_01600 glcD-1; FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D GF1_24640 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D GF1_12680 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D GF1_28960 haloacid dehalogenase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D GF1_01050 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GF1_10340 hypothetical protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GF1_27120 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GF1_11470 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GF1_07600 fdnG; formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D GF1_07590 fdhB; formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D GF1_07580 fdhC; formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
C 00640 Propanoate metabolism [PATH:ddu00640]
D GF1_25320 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GF1_29580 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D GF1_15610 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D GF1_25870 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D GF1_02790 hypothetical protein K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GF1_29670 acetyl/propionyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D GF1_29660 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D GF1_29650 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D GF1_29620 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D GF1_29640 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D GF1_29590 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GF1_29600 hypothetical protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:ddu00650]
D GF1_11240 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GF1_11230 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GF1_22000 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GF1_20380 por; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D GF1_14420 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D GF1_14430 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GF1_20130 ilvB-2; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GF1_24020 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GF1_20140 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ddu00660]
D GF1_20130 ilvB-2; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GF1_24020 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GF1_20140 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GF1_29590 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GF1_29600 hypothetical protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GF1_14850 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GF1_14860 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GF1_05030 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ddu00562]
D GF1_11340 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GF1_14290 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D GF1_27140 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ddu00190]
D GF1_30510 nuoA_2; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D GF1_04230 nuoA_1; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D GF1_30520 nuoB2; NADH-quinone oxidoreductase subunit B 2 K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D GF1_31240 nuoB_2; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D GF1_04240 nuoB_1; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D GF1_30540 nuoD1; NADH-quinone oxidoreductase subunit D 1 K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D GF1_31220 nuoD_2; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D GF1_04260 nuoD_1; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D GF1_30550 nuoH_1; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D GF1_31210 nuoH_2; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D GF1_30580 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D GF1_31180 ndhE_2; NAD(P)H-quinone oxidoreductase subunit 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D GF1_04310 ndhE_1; NAD(P)H-quinone oxidoreductase subunit 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D GF1_30590 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D GF1_30600 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D GF1_31140 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D GF1_04350 nuoM3; NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D GF1_30610 nuoN-1; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D GF1_11240 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GF1_11230 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GF1_29720 cydA; cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GF1_29690 cydB_1; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GF1_29730 cydB_2; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GF1_25030 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GF1_25010 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GF1_25020 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GF1_25000 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GF1_25660 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GF1_25650 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GF1_22060 ppaC; manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D GF1_08100 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D GF1_08110 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:ddu00710]
D GF1_27150 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GF1_25490 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GF1_27170 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GF1_13220 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GF1_12860 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GF1_13670 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GF1_10330 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GF1_27140 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GF1_25930 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GF1_31900 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D GF1_18450 pckA2; phosphoenolpyruvate carboxykinase [ATP] 2 K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D GF1_15220 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Carbon fixation pathways in prokaryotes [PATH:ddu00720]
D GF1_20380 por; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D GF1_21790 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D GF1_15220 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GF1_14310 fumB; fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D GF1_11240 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GF1_11230 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GF1_29600 hypothetical protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GF1_29590 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GF1_14420 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D GF1_14430 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GF1_14440 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D GF1_32410 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GF1_05540 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D GF1_02790 hypothetical protein K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GF1_29650 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D GF1_29640 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D GF1_29620 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D GF1_09750 hypothetical protein K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D GF1_21850 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D GF1_14180 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GF1_31690 5-methyltetrahydrofolate:corrinoid/iron-sulfur protein Co-methyltransferase K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258]
D GF1_14190 cooS_2; carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D GF1_01790 cooS_1; carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D GF1_14210 acetyl-CoA decarbonylase K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169]
D GF1_14220 corrinoid/iron-sulfur protein large subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D GF1_25320 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:ddu00680]
D GF1_07600 fdnG; formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D GF1_07590 fdhB; formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D GF1_07580 fdhC; formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D GF1_09750 hypothetical protein K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D GF1_14220 corrinoid/iron-sulfur protein large subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D GF1_14190 cooS_2; carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D GF1_01790 cooS_1; carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D GF1_10340 hypothetical protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GF1_10410 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GF1_15220 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GF1_13220 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GF1_12860 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GF1_24120 pfk-1; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D GF1_14250 hypothetical protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D GF1_18180 hypothetical protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D GF1_00860 hypothetical protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D GF1_06300 hdrG; heterodisulfide reductase subunit D K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D GF1_00870 methyl-viologen-reducing hydrogenase subunit delta K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D GF1_18140 methylviologen-reducing hydrogenase subunit alpha K14126 mvhA; F420-non-reducing hydrogenase large subunit [EC:1.12.99.- 1.8.98.5]
D GF1_25320 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GF1_21790 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D GF1_04690 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GF1_02110 apgM; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GF1_05530 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GF1_13030 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GF1_14500 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:ddu00910]
D GF1_09890 napA; periplasmic nitrate reductase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D GF1_19860 nitrate reductase catalytic subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D GF1_02390 nifD; nitrogenase protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D GF1_02380 nifK; nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D GF1_02420 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D GF1_17480 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D GF1_22420 hypothetical protein K10535 hao; hydroxylamine dehydrogenase [EC:1.7.2.6]
D GF1_02650 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D GF1_22110 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D GF1_01050 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GF1_04780 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GF1_24990 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D GF1_24870 ecaB; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D GF1_25480 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ddu00920]
D GF1_19970 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GF1_00810 sopT; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GF1_23660 aprA; adenylylsulfate reductase subunit alpha K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D GF1_23670 aprB; adenylylsulfate reductase subunit beta K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D GF1_25910 sulfite reductase, dissimilatory-type subunit alpha K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D GF1_25900 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D GF1_26980 menaquinol oxidoreductase K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D GF1_26970 4Fe-4S ferredoxin K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D GF1_26960 cytochrome c K27189 dsrJ; [DsrC]-trisulfide reductase subunit J
D GF1_26950 4Fe-4S ferredoxin K27190 dsrO; [DsrC]-trisulfide reductase subunit O
D GF1_26940 Hdr menaquinol oxidoreductase integral membrane subunit K27191 dsrP; [DsrC]-trisulfide reductase subunit P
D GF1_05460 pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D GF1_03360 oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D GF1_03950 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D GF1_03930 ttrB_2; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D GF1_06590 4Fe-4S ferredoxin K08358 ttrB; tetrathionate reductase subunit B
D GF1_06580 hypothetical protein K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D GF1_10120 thiosulfate reductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D GF1_30490 thiosulfate reductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D GF1_32230 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GF1_32240 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GF1_32210 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ddu00061]
D GF1_02790 hypothetical protein K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GF1_10300 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D GF1_25190 hypothetical protein K02078 acpP; acyl carrier protein
D GF1_15830 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GF1_10250 fabH-2; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GF1_02550 fabB; beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GF1_10320 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GF1_08770 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GF1_10290 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GF1_25160 fabG_2; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GF1_05980 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GF1_25130 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GF1_05560 fabL; enoyl-[acyl-carrier-protein] reductase [NADPH] FabL K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D GF1_01340 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ddu00071]
D GF1_01340 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GF1_04630 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ddu00561]
D GF1_27120 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GF1_31540 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D GF1_10240 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GF1_28250 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GF1_29570 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:ddu00564]
D GF1_30810 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D GF1_04900 glpA; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D GF1_28250 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GF1_29570 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D GF1_04910 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D GF1_20160 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D GF1_20150 psd; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D GF1_31920 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D GF1_28300 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D GF1_08310 clsA; cardiolipin synthase A K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ddu00230]
D GF1_00980 xanA; phosphohexose mutases K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GF1_13060 prsA_2; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GF1_26360 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GF1_13950 hypothetical protein K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D GF1_21960 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D GF1_30970 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D GF1_12790 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D GF1_18790 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D GF1_14590 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GF1_24290 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GF1_00200 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GF1_32320 haloacid dehalogenase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D GF1_04710 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GF1_00290 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D GF1_28920 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GF1_17980 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GF1_30820 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D GF1_31580 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D GF1_28930 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GF1_22310 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D GF1_12040 nrdJ; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GF1_26260 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D GF1_02860 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D GF1_23070 hypothetical protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GF1_06220 CYTH domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D GF1_19590 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GF1_02090 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GF1_24960 hydrolase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D GF1_19970 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GF1_00810 sopT; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GF1_22610 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D GF1_22620 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D GF1_22630 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:ddu00240]
D GF1_05390 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GF1_05380 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GF1_27200 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GF1_27190 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D GF1_26900 pyrD; dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D GF1_26910 pyrK; dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D GF1_05940 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D GF1_32090 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D GF1_23160 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D GF1_17980 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GF1_05770 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D GF1_28380 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D GF1_30620 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D GF1_00200 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GF1_01740 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D GF1_21950 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GF1_26260 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D GF1_12040 nrdJ; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GF1_29070 nucleotide pyrophosphohydrolase K16904 DCTPP1; dCTP diphosphatase [EC:3.6.1.12]
D GF1_18580 cytidine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D GF1_15730 hypothetical protein K00943 tmk; dTMP kinase [EC:2.7.4.9]
D GF1_01540 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ddu00250]
D GF1_04200 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GF1_07040 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GF1_30910 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D GF1_21420 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GF1_00330 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GF1_00470 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GF1_29090 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D GF1_31810 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GF1_31820 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GF1_19590 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GF1_14590 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GF1_27200 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GF1_22000 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GF1_04780 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GF1_24990 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D GF1_22110 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D GF1_01050 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GF1_05390 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GF1_05380 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GF1_05950 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GF1_26360 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ddu00260]
D GF1_14520 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GF1_05050 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GF1_02100 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GF1_04700 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D GF1_10340 hypothetical protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GF1_27120 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GF1_04690 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GF1_02110 apgM; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GF1_05530 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GF1_13030 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GF1_14500 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GF1_20160 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D GF1_18540 serine/threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GF1_11280 trpB_1; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GF1_15680 trpB_2; tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ddu00270]
D GF1_32230 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GF1_32240 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GF1_05580 metF-2; bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D GF1_05590 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GF1_00100 mtaD_1; 5-methylthioadenosine/S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D GF1_04740 mtaD_2; 5-methylthioadenosine/S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D GF1_19260 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D GF1_05600 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GF1_14520 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GF1_05050 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GF1_02100 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GF1_17180 hypothetical protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16]
D GF1_32210 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D GF1_32200 metY; O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D GF1_27900 ilvK; branched-chain-amino-acid aminotransferase 2 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GF1_04200 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GF1_07040 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GF1_15220 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GF1_05530 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GF1_13030 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GF1_14500 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ddu00280]
D GF1_27900 ilvK; branched-chain-amino-acid aminotransferase 2 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GF1_29670 acetyl/propionyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D GF1_29660 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D GF1_29650 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D GF1_29620 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D GF1_29640 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ddu00290]
D GF1_18540 serine/threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GF1_14850 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GF1_14860 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GF1_05030 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D GF1_20130 ilvB-2; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GF1_24020 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GF1_20140 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GF1_28860 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GF1_27900 ilvK; branched-chain-amino-acid aminotransferase 2 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GF1_08410 avtA; valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D GF1_14530 hypothetical protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D GF1_17570 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ddu00300]
D GF1_02100 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GF1_14520 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GF1_05050 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GF1_31860 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GF1_31870 dapB1; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D GF1_31780 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GF1_31850 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GF1_28340 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D GF1_31840 lysA-1; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00310 Lysine degradation [PATH:ddu00310]
D GF1_22000 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GF1_10830 yjeK; lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
C 00220 Arginine biosynthesis [PATH:ddu00220]
D GF1_31800 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D GF1_31810 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GF1_31820 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GF1_22610 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D GF1_22620 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D GF1_22630 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D GF1_01050 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GF1_05390 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GF1_05380 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GF1_22110 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D GF1_04200 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GF1_07040 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GF1_08070 acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D GF1_08320 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D GF1_31770 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D GF1_05800 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D GF1_31780 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:ddu00330]
D GF1_07450 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D GF1_15030 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D GF1_15020 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D GF1_04200 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GF1_07040 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:ddu00340]
D GF1_13860 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D GF1_13850 hypothetical protein K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D GF1_06110 hypothetical protein K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D GF1_05840 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D GF1_30630 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GF1_05010 hypothetical protein K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:ddu00350]
D GF1_04200 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GF1_07040 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GF1_30630 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GF1_04630 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D GF1_22000 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:ddu00360]
D GF1_31050 hypothetical protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D GF1_03280 paaK-2; phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D GF1_03350 paaK-1; phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D GF1_28000 phenylacetic acid degradation protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D GF1_04200 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GF1_07040 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GF1_30630 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
D GF1_24640 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ddu00400]
D GF1_31710 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GF1_19940 hypothetical protein K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D GF1_26880 aroE; shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D GF1_32300 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D GF1_26870 aroA2; 3-phosphoshikimate 1-carboxyvinyltransferase 2 K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D GF1_25520 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D GF1_09550 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GF1_09560 trpG; glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D GF1_09570 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D GF1_09590 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D GF1_09580 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D GF1_11280 trpB_1; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GF1_15680 trpB_2; tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GF1_17190 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D GF1_04200 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GF1_07040 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GF1_30630 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ddu00410]
D GF1_15260 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D GF1_15270 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:ddu00430]
D GF1_08450 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GF1_29090 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:ddu00440]
D GF1_27780 carbon-phosphorus lyase K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D GF1_27810 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D GF1_27820 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D GF1_27790 phnJ; carbon-phosphorus lyase complex subunit PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
C 00450 Selenocompound metabolism [PATH:ddu00450]
D GF1_05580 metF-2; bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D GF1_25710 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D GF1_19970 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GF1_00810 sopT; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GF1_26350 hypothetical protein K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D GF1_17370 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D GF1_00160 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ddu00460]
D GF1_08450 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GF1_10340 hypothetical protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ddu00470]
D GF1_08040 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GF1_01620 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GF1_22250 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GF1_20680 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GF1_31850 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GF1_31840 lysA-1; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:ddu00480]
D GF1_08450 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GF1_04470 oplaH; 5-oxoprolinase K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D GF1_12850 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GF1_18470 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D GF1_32410 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GF1_11500 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:ddu00540]
D GF1_05990 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GF1_07440 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D GF1_05970 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D GF1_06000 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D GF1_07360 hypothetical protein K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D GF1_25860 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D GF1_28370 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D GF1_28360 kdsC; haloacid dehalogenase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D GF1_15230 kdsB; 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ddu00541]
D GF1_14010 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GF1_21220 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GF1_24550 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GF1_10440 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GF1_13230 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D GF1_00970 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GF1_12170 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GF1_12180 rfbC-2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GF1_00960 rmlD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D GF1_00990 xanB; xanthan biosynthesis protein XanB K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D GF1_03800 glucose-1-phosphate thymidylyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GF1_24240 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GF1_21520 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D GF1_00420 hypothetical protein K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D GF1_08720 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D GF1_21150 UDP-glucose 4-epimerase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
D GF1_09820 wbpA; UDP-N-acetyl-d-glucosamine 6-dehydrogenase WbpA K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D GF1_05330 UDP-N-acetylglucosamine C4 epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:ddu00550]
D GF1_13170 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GF1_20640 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GF1_20650 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GF1_20680 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GF1_01620 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GF1_23140 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GF1_20690 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GF1_20660 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GF1_23920 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ddu00543]
D GF1_32230 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ddu00730]
D GF1_02520 thiC1; phosphomethylpyrimidine synthase 1 K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D GF1_24250 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D GF1_21830 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GF1_24280 thiH; thiamine biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D GF1_13320 dxs1; 1-deoxy-D-xylulose-5-phosphate synthase 1 K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GF1_24270 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D GF1_10010 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D GF1_02090 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ddu00740]
D GF1_23730 ribA; riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D GF1_10380 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GF1_23720 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D GF1_23740 ribE; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D GF1_23780 ribF; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D GF1_30330 hypothetical protein K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D GF1_18850 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:ddu00750]
D GF1_14500 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GF1_15740 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D GF1_11790 hypothetical protein K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D GF1_04700 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ddu00760]
D GF1_30910 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D GF1_03770 nadA; quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D GF1_02880 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D GF1_04710 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GF1_00200 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GF1_03840 nadE; NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D GF1_07460 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D GF1_01760 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D GF1_01770 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D GF1_01780 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D GF1_22000 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ddu00770]
D GF1_20130 ilvB-2; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GF1_24020 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GF1_20140 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GF1_28860 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GF1_20750 hypothetical protein K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D GF1_15270 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D GF1_14750 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D GF1_10490 peptidase ClpP K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D GF1_20180 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D GF1_27900 ilvK; branched-chain-amino-acid aminotransferase 2 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GF1_15260 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:ddu00780]
D GF1_02550 fabB; beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GF1_10320 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GF1_08770 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GF1_10290 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GF1_25160 fabG_2; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GF1_05980 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GF1_25130 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GF1_30240 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D GF1_28460 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D GF1_30310 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D GF1_28430 hypothetical protein K01012 bioB; biotin synthase [EC:2.8.1.6]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:ddu00790]
D GF1_19520 folE2_1; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D GF1_21990 folE2_2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D GF1_31880 hypothetical protein K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D GF1_05410 hypothetical protein K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D GF1_29410 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GF1_07260 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D GF1_23730 ribA; riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D GF1_20350 aminodeoxychorismate synthase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D GF1_09830 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D GF1_01590 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D GF1_01580 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GF1_17220 moaA; GTP 3',8-cyclase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D GF1_19560 cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D GF1_07900 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D GF1_07910 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:ddu00670]
D GF1_29410 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GF1_21850 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D GF1_14180 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GF1_10340 hypothetical protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GF1_21960 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D GF1_24290 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GF1_28280 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GF1_05580 metF-2; bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D GF1_30680 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ddu00860]
D GF1_13020 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GF1_24330 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D GF1_25690 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GF1_12070 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GF1_02080 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D GF1_03710 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D GF1_23900 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D GF1_02070 uroporphyrinogen III methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D GF1_24360 hypothetical protein K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D GF1_03730 hypothetical protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D GF1_26160 cobalt chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D GF1_00190 hypothetical protein K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D GF1_26060 cbiF; cobalt-precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D GF1_26050 cobalamin (vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D GF1_26090 cbiD; cobalt-precorrin-5B C(1)-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D GF1_26100 cbiC; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D GF1_19010 cobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D GF1_26110 cbiA; cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D GF1_15860 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D GF1_15370 hypothetical protein K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D GF1_15360 cobD_1; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D GF1_15430 cobP; adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D GF1_15390 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D GF1_11200 thiC; phosphomethylpyrimidine synthase K22466 bzaF; 5-hydroxybenzimidazole synthase [EC:4.1.99.23]
D GF1_15400 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ddu00130]
D GF1_18840 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D GF1_18850 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D GF1_18860 ubiE; ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D GF1_18870 mqnA; chorismate dehydratase K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D GF1_18910 mqnE; aminodeoxyfutalosine synthase K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D GF1_22170 hypothetical protein K11783 mqnB; futalosine hydrolase [EC:3.2.2.26]
D GF1_18900 mqnC; cyclic dehypoxanthine futalosine synthase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D GF1_22160 mqnD; 1,4-dihydroxy-6-naphtoate synthase K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ddu00900]
D GF1_13320 dxs1; 1-deoxy-D-xylulose-5-phosphate synthase 1 K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GF1_23120 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D GF1_26310 ispDF; bifunctional enzyme IspD/IspF K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D GF1_23090 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D GF1_27110 lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D GF1_18850 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D GF1_27100 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D GF1_23140 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GF1_32280 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D GF1_13670 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ddu00523]
D GF1_00970 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GF1_12170 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GF1_12180 rfbC-2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GF1_00960 rmlD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D GF1_12170 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:ddu00332]
D GF1_15030 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D GF1_15020 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ddu00261]
D GF1_19970 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GF1_00810 sopT; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GF1_14520 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GF1_05050 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GF1_31860 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GF1_31870 dapB1; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ddu00521]
D GF1_29010 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GF1_00980 xanA; phosphohexose mutases K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GF1_14290 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D GF1_11340 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GF1_00970 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GF1_12170 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GF1_12180 rfbC-2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GF1_00960 rmlD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D GF1_29010 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ddu00525]
D GF1_00970 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GF1_12170 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ddu00401]
D GF1_04200 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GF1_07040 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GF1_30630 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D GF1_09550 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GF1_09560 trpG; glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D GF1_15830 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GF1_08770 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GF1_10290 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GF1_25160 fabG_2; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GF1_25130 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D GF1_10300 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D GF1_25190 hypothetical protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ddu00999]
D GF1_05590 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GF1_26880 aroE; shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D GF1_24540 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00627 Aminobenzoate degradation [PATH:ddu00627]
D GF1_24520 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D GF1_18850 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:ddu00625]
D GF1_04630 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D GF1_02380 nifK; nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D GF1_02420 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D GF1_02390 nifD; nitrogenase protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D GF1_24540 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:ddu00633]
D GF1_18090 hybL; hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D GF1_18100 hybS; oxidoreductase K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D GF1_14190 cooS_2; carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D GF1_01790 cooS_1; carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D GF1_25910 sulfite reductase, dissimilatory-type subunit alpha K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D GF1_25900 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
D GF1_22610 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D GF1_22620 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D GF1_22630 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D GF1_24540 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:ddu00626]
D GF1_04630 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ddu03020]
D GF1_23540 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GF1_23530 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GF1_23210 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GF1_19580 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ddu03010]
D GF1_22290 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GF1_28890 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GF1_23180 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GF1_23410 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GF1_23220 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GF1_23300 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GF1_23510 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GF1_23330 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GF1_05820 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GF1_23480 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GF1_23230 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GF1_23520 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GF1_23240 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GF1_23340 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D GF1_01470 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GF1_15810 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GF1_23380 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GF1_13730 hypothetical protein K02963 RP-S18; small subunit ribosomal protein S18
D GF1_23430 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GF1_09540 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GF1_01570 rpsU1; 30S ribosomal protein S21 A K02970 RP-S21; small subunit ribosomal protein S21
D GF1_23570 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GF1_23440 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D GF1_23470 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GF1_23460 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D GF1_23350 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GF1_23320 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GF1_23550 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GF1_13710 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GF1_23560 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GF1_23580 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GF1_05830 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GF1_23370 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GF1_23280 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GF1_23400 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GF1_23200 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GF1_23310 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GF1_15760 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GF1_19120 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GF1_15060 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GF1_23420 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GF1_23450 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D GF1_23360 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GF1_15050 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GF1_19390 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GF1_23390 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GF1_23290 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D GF1_13140 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GF1_10230 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GF1_23610 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GF1_19110 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GF1_r00010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GF1_r00030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ddu00970]
D GF1_13020 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GF1_30640 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GF1_30940 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GF1_30650 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GF1_13010 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GF1_25220 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GF1_02630 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GF1_05890 hypothetical protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GF1_27350 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GF1_19510 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GF1_19090 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GF1_01630 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GF1_17370 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D GF1_07220 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GF1_00160 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GF1_28280 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GF1_02870 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GF1_13690 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GF1_15850 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GF1_05110 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GF1_08050 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GF1_23080 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GF1_02640 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GF1_19130 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GF1_19140 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GF1_22430 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GF1_05190 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ddu03060]
D GF1_23270 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GF1_27130 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D GF1_29140 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GF1_08080 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GF1_15820 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GF1_07020 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D GF1_04750 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D GF1_04760 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D GF1_27210 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GF1_15840 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ddu04122]
D GF1_21830 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GF1_30700 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D GF1_29240 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GF1_17220 moaA; GTP 3',8-cyclase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D GF1_19560 cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D GF1_24260 hypothetical protein K03154 thiS; sulfur carrier protein
D GF1_24250 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ddu03018]
D GF1_10410 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GF1_01480 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GF1_09720 rhlE-2; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GF1_25470 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GF1_26850 deaD-1; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GF1_17600 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GF1_13130 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GF1_22440 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D GF1_21340 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D GF1_05180 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GF1_27920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GF1_08100 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D GF1_08110 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ddu03030]
D GF1_13540 dnaE; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GF1_13700 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GF1_14880 ssb_1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GF1_16860 ssb_2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GF1_24530 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ddu03410]
D GF1_07130 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GF1_07140 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GF1_00900 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GF1_00210 nfo; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D GF1_24530 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ddu03420]
D GF1_32340 hypothetical protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GF1_27320 hypothetical protein K03701 uvrA; excinuclease ABC subunit A
D GF1_15500 hypothetical protein K03702 uvrB; excinuclease ABC subunit B
D GF1_18340 hypothetical protein K03703 uvrC; excinuclease ABC subunit C
D GF1_07270 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GF1_24530 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ddu03430]
D GF1_24970 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GF1_04860 hypothetical protein K03572 mutL; DNA mismatch repair protein MutL
D GF1_07270 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GF1_15290 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GF1_13330 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GF1_14880 ssb_1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GF1_16860 ssb_2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GF1_13540 dnaE; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GF1_24530 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ddu03440]
D GF1_14880 ssb_1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GF1_16860 ssb_2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GF1_17990 recR; recombination protein RecR K06187 recR; recombination protein RecR
D GF1_29270 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA
D GF1_20780 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GF1_20770 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GF1_20790 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D GF1_28120 recD; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GF1_13540 dnaE; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GF1_14020 hypothetical protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ddu02010]
D GF1_07700 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D GF1_07710 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D GF1_28580 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D GF1_28590 modB; molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein
D GF1_28600 modC; molybdate-transporting ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D GF1_04930 hypothetical protein K11071 potB; spermidine/putrescine transport system permease protein
D GF1_04940 potA; spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D GF1_10970 proX; glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D GF1_10960 glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D GF1_10950 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D GF1_10200 organic solvent tolerance ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D GF1_15130 paraquat-inducible protein B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GF1_10180 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GF1_10160 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GF1_15110 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GF1_10170 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GF1_15120 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GF1_31550 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D GF1_31560 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D GF1_31570 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D GF1_31590 branched chain amino acid ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D GF1_31530 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D GF1_31520 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D GF1_31510 ugpE; sn-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D GF1_31500 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D GF1_31470 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GF1_31450 phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D GF1_31460 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D GF1_31480 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GF1_27740 phoD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D GF1_27750 phnE; phosphonate transporter PhnE K02042 phnE; phosphonate transport system permease protein
D GF1_27730 phnC; phosphonates import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D GF1_32150 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D GF1_32160 aapQ; amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D GF1_32170 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D GF1_32190 hypothetical protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D GF1_07420 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_24570 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_24580 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_31040 livK-1_2; branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_03300 livK-1_1; branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_07410 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_24590 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_28670 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_31100 livH_2; branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_03310 livH_1; branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_07400 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GF1_24600 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GF1_28660 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GF1_31070 livM_2; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GF1_07390 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_24610 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_28650 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_31060 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_03330 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_07380 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GF1_24620 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GF1_28640 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GF1_03340 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GF1_22690 ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D GF1_22680 branched-chain amino acid ABC transporter permease K11960 urtB; urea transport system permease protein
D GF1_22670 urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D GF1_22660 ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D GF1_22650 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D GF1_31350 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D GF1_31360 dppB; peptide ABC transporter permease K12369 dppB; dipeptide transport system permease protein
D GF1_31370 dppC; dipeptide ABC transporter permease DppC K12370 dppC; dipeptide transport system permease protein
D GF1_31380 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D GF1_31390 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D GF1_14840 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D GF1_08460 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D GF1_08470 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D GF1_18330 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D GF1_24080 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D GF1_24070 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D GF1_27500 cbiM; cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D GF1_27530 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D GF1_27550 hypothetical protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D GF1_27520 ATP-dependent DNA ligase K10094 cbiK; nickel transport protein
D GF1_21550 hypothetical protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D GF1_05100 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D GF1_05080 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GF1_11390 ccmC; cytochrome C biogenesis protein CcmC K02195 ccmC; heme exporter protein C
D GF1_31750 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D GF1_12650 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GF1_21920 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GF1_15150 xenobiotic ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D GF1_01130 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
C 02060 Phosphotransferase system (PTS) [PATH:ddu02060]
D GF1_10000 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
C 03070 Bacterial secretion system [PATH:ddu03070]
D GF1_21710 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D GF1_21650 hypothetical protein K02462 gspM; general secretion pathway protein M
D GF1_21590 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D GF1_00230 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D GF1_27130 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D GF1_23270 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GF1_29140 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GF1_08080 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GF1_07020 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D GF1_15820 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GF1_04750 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D GF1_04760 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ddu02020]
D GF1_31430 phoB; DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D GF1_31470 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GF1_29060 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D GF1_18780 czcR; DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D GF1_08700 fliC_1; flagellin K02406 fliC; flagellin
D GF1_08710 fliC_2; flagellin K02406 fliC; flagellin
D GF1_09000 fliA; DNA-directed RNA polymerase sigma-70 factor K02405 fliA; RNA polymerase sigma factor FliA
D GF1_09170 motA-1; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D GF1_10840 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D GF1_08870 carbon storage regulator K03563 csrA; carbon storage regulator
D GF1_01030 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D GF1_02510 glnB; nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1
D GF1_01050 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GF1_12090 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D GF1_12080 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D GF1_30840 nifA; sigma-54-dependent Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D GF1_02250 nifA-2; Nif-specific regulatory protein K02584 nifA; Nif-specific regulatory protein
D GF1_11190 acetoacetate metabolism regulatory protein AtoC K07713 zraR; two-component system, NtrC family, response regulator HydG
D GF1_28320 hypothetical protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D GF1_05140 acetoacetate metabolism regulatory protein AtoC K07713 zraR; two-component system, NtrC family, response regulator HydG
D GF1_11530 acetoacetate metabolism regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D GF1_19910 atoC; acetoacetate metabolism regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D GF1_20050 acetoacetate metabolism regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D GF1_10870 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D GF1_13190 pilR; acetoacetate metabolism regulatory protein AtoC K02667 pilR; two-component system, NtrC family, response regulator PilR
D GF1_31740 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D GF1_00850 transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D GF1_18100 hybS; oxidoreductase K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D GF1_18090 hybL; hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D GF1_13770 cheR1; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D GF1_09330 cheY64H-1; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GF1_23980 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D GF1_10880 dctP; C4-dicarboxylate ABC transporter K11688 dctP; C4-dicarboxylate-binding protein DctP
D GF1_10890 dctQ; C4-dicarboxylate ABC transporter permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D GF1_10900 dctM; C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D GF1_04490 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D GF1_22830 hypothetical protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D GF1_03950 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D GF1_03930 ttrB_2; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D GF1_06590 4Fe-4S ferredoxin K08358 ttrB; tetrathionate reductase subunit B
D GF1_09380 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GF1_28530 DNA-binding response regulator K15012 regA; two-component system, response regulator RegA
D GF1_29720 cydA; cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GF1_29690 cydB_1; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GF1_29730 cydB_2; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GF1_21520 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D GF1_00420 hypothetical protein K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ddu02024]
D GF1_09550 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GF1_09560 trpG; glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D GF1_31710 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GF1_00850 transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D GF1_07420 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_24570 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_24580 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_31040 livK-1_2; branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_03300 livK-1_1; branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_07410 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_24590 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_28670 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_31100 livH_2; branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_03310 livH_1; branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_07400 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GF1_24600 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GF1_28660 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GF1_31070 livM_2; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GF1_07390 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_24610 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_28650 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_31060 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_03330 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_07380 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GF1_24620 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GF1_28640 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GF1_03340 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GF1_01340 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GF1_09380 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GF1_10380 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GF1_03000 membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D GF1_27130 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D GF1_23270 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GF1_29140 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GF1_08080 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GF1_07020 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D GF1_15820 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ddu02030]
D GF1_31350 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D GF1_09330 cheY64H-1; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GF1_09340 cheX64H_1; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D GF1_13770 cheR1; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D GF1_09260 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GF1_09130 hypothetical protein K02417 fliN; flagellar motor switch protein FliN
D GF1_09170 motA-1; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
C 02040 Flagellar assembly [PATH:ddu02040]
D GF1_09280 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D GF1_09270 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D GF1_09260 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GF1_09240 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GF1_09130 hypothetical protein K02417 fliN; flagellar motor switch protein FliN
D GF1_09110 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GF1_09060 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GF1_09030 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GF1_09040 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GF1_09300 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D GF1_09290 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D GF1_09180 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D GF1_08980 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D GF1_08970 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D GF1_08950 flgH; flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D GF1_08940 flgI; flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D GF1_08700 fliC_1; flagellin K02406 fliC; flagellin
D GF1_08710 fliC_2; flagellin K02406 fliC; flagellin
D GF1_09170 motA-1; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D GF1_18920 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor
D GF1_25950 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GF1_31740 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D GF1_09000 fliA; DNA-directed RNA polymerase sigma-70 factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D GF1_10410 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D GF1_29630 methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ddu01501]
D GF1_07210 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D GF1_07310 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D GF1_03000 membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D GF1_23920 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ddu01502]
D GF1_01620 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GF1_08040 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GF1_20690 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GF1_20660 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ddu01503]
D GF1_29060 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D GF1_05990 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ddu01000]
C 01001 Protein kinases [BR:ddu01001]
D GF1_12090 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ddu01009]
D GF1_05600 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GF1_00040 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:ddu01002]
D GF1_15840 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GF1_26920 pilD; type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GF1_28930 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GF1_26360 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GF1_04780 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GF1_05950 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GF1_21420 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GF1_00330 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GF1_00470 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GF1_22800 glutamine amidotransferase K26818 pfpI; archaeal arginyl aminopeptidase [EC:3.4.11.27]
D GF1_18470 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D GF1_11320 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D GF1_12850 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GF1_23260 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D GF1_32110 aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D GF1_05400 ftsH-2_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GF1_09410 ftsH-2_2; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GF1_19810 ftsH-2_3; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GF1_29350 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GF1_03390 ftsH-1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GF1_32280 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D GF1_26000 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D GF1_23110 rseP; zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D GF1_29060 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D GF1_11840 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D GF1_07000 hypothetical protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D GF1_11860 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D GF1_03810 lon-3; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D GF1_29830 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D GF1_27210 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GF1_12620 ctpA-2; peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D GF1_19290 protease 4 K04773 sppA; protease IV [EC:3.4.21.-]
D GF1_13350 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D GF1_08450 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GF1_29190 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D GF1_23820 protein HflC K04087 hflC; modulator of FtsH protease HflC
C 01003 Glycosyltransferases [BR:ddu01003]
D GF1_20230 glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
D GF1_10940 spsA; sucrose synthase K00695 SUS; sucrose synthase [EC:2.4.1.13]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ddu01005]
D GF1_05990 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GF1_07360 hypothetical protein K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D GF1_07440 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D GF1_05970 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D GF1_06000 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D GF1_15250 kdnA; 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase K19715 kdnA; 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase [EC:2.6.1.109]
D GF1_28370 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D GF1_15230 kdsB; 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D GF1_28360 kdsC; haloacid dehalogenase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D GF1_25860 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D GF1_21140 glycosyl transferase K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ddu01011]
D GF1_13170 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GF1_20640 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GF1_20650 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GF1_20680 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GF1_01620 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GF1_08040 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GF1_22250 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GF1_20690 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GF1_20660 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GF1_12760 putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D GF1_23920 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GF1_03820 yceG; aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D GF1_09600 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:ddu01004]
D GF1_15830 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GF1_10250 fabH-2; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GF1_02550 fabB; beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GF1_10320 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GF1_08770 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GF1_10290 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GF1_25160 fabG_2; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GF1_05980 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GF1_25130 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GF1_05560 fabL; enoyl-[acyl-carrier-protein] reductase [NADPH] FabL K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D GF1_25320 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GF1_29580 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D GF1_15610 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D GF1_01340 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GF1_10240 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GF1_28250 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:ddu01006]
D GF1_27100 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D GF1_23140 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GF1_14560 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GF1_18840 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:ddu01007]
D GF1_13020 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GF1_13010 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GF1_22430 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GF1_05190 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GF1_07220 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GF1_08050 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GF1_00160 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GF1_15850 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GF1_02870 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GF1_13690 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GF1_05110 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GF1_02630 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GF1_05890 hypothetical protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GF1_02640 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GF1_27350 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GF1_19510 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GF1_01630 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GF1_23080 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GF1_19090 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GF1_25220 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GF1_19130 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GF1_19140 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GF1_04200 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GF1_07040 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GF1_08410 avtA; valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D GF1_28340 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D GF1_30630 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GF1_30240 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D GF1_31780 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GF1_28460 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D GF1_25690 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GF1_27900 ilvK; branched-chain-amino-acid aminotransferase 2 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GF1_20350 aminodeoxychorismate synthase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D GF1_14500 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ddu00194]
D GF1_25000 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GF1_25010 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GF1_25020 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GF1_25030 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GF1_25650 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GF1_25660 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ddu03000]
D GF1_03600 ada; bifunctional transcriptional activator/DNA repair enzyme protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D GF1_17430 transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D GF1_04980 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D GF1_30410 hypothetical protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D GF1_22410 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D GF1_09380 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GF1_01800 transcriptional regulator K21555 cooA; CRP/FNR family transcriptional regulator, carbon monoxide oxidation system transcription regulator
D GF1_17470 fnr-1; CarD family transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D GF1_15540 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D GF1_02610 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D GF1_10990 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D GF1_30840 nifA; sigma-54-dependent Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D GF1_02250 nifA-2; Nif-specific regulatory protein K02584 nifA; Nif-specific regulatory protein
D GF1_27490 putative nickel-responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D GF1_30890 spoOJ; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GF1_13090 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D GF1_21950 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GF1_11750 hypothetical protein K07733 alpA; prophage regulatory protein
D GF1_14050 UPF0301 protein K07735 algH; putative transcriptional regulator
D GF1_19550 dksA_1; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D GF1_10360 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:ddu03021]
D GF1_23210 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GF1_23540 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GF1_23530 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GF1_19580 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GF1_18920 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor
D GF1_25950 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GF1_11040 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GF1_13900 RNA polymerase sigma factor K03089 rpoH; RNA polymerase sigma-32 factor
D GF1_31740 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D GF1_09000 fliA; DNA-directed RNA polymerase sigma-70 factor K02405 fliA; RNA polymerase sigma factor FliA
D GF1_01410 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GF1_23590 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GF1_19550 dksA_1; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D GF1_13930 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D GF1_13130 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ddu03019]
D GF1_14920 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D GF1_02910 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GF1_22440 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D GF1_00130 yhaM; HD family phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D GF1_09720 rhlE-2; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GF1_25470 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GF1_26850 deaD-1; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GF1_17600 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GF1_10410 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GF1_01480 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GF1_13130 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GF1_21340 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D GF1_05180 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GF1_27920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GF1_08100 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D GF1_08110 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D GF1_08870 carbon storage regulator K03563 csrA; carbon storage regulator
D GF1_14000 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:ddu03011]
D GF1_22290 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GF1_28890 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GF1_23180 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GF1_23410 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GF1_23220 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GF1_23300 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GF1_23510 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GF1_23330 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GF1_05820 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GF1_23480 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GF1_23230 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GF1_23520 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GF1_23240 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GF1_23340 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D GF1_01470 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GF1_15810 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GF1_23380 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GF1_13730 hypothetical protein K02963 RP-S18; small subunit ribosomal protein S18
D GF1_23430 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GF1_09540 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GF1_01570 rpsU1; 30S ribosomal protein S21 A K02970 RP-S21; small subunit ribosomal protein S21
D GF1_23570 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GF1_23440 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D GF1_23470 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GF1_23460 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D GF1_23350 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GF1_23320 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GF1_13710 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GF1_23560 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GF1_23580 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GF1_23550 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GF1_05830 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GF1_23370 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GF1_23280 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GF1_23400 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GF1_23200 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GF1_23310 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GF1_15760 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GF1_19120 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GF1_15060 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GF1_23420 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GF1_23450 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D GF1_23360 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GF1_15050 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GF1_19390 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GF1_23390 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GF1_23290 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D GF1_13140 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GF1_10230 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GF1_23610 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GF1_19110 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GF1_r00030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GF1_r00010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ddu03009]
D GF1_02910 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GF1_12200 era; GTPase Era K03595 era; GTPase
D GF1_15040 hypothetical protein K03979 obgE; GTPase [EC:3.6.5.-]
D GF1_19550 dksA_1; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D GF1_01410 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GF1_23590 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GF1_20170 methyltransferase small K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D GF1_20730 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D GF1_11550 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D GF1_15240 rsmJ; ribosomal RNA small subunit methyltransferase J K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D GF1_10620 TlyA family rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D GF1_22300 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D GF1_20810 rlmE; ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D GF1_14070 rlmH; ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D GF1_03440 rlmL; ribosomal RNA large subunit methyltransferase K/L K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D GF1_14480 rlmN; dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D GF1_25610 rluB; pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D GF1_13110 hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GF1_25630 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D GF1_14800 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D GF1_14920 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D GF1_25470 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GF1_26850 deaD-1; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GF1_06150 der; GTPase Der K03977 engA; GTPase
D GF1_05910 hflX; GTPase HflX K03665 hflX; GTPase
D GF1_23070 hypothetical protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GF1_01400 ribosome maturation factor K09748 rimP; ribosome maturation factor RimP
D GF1_12020 S4 RNA-binding domain protein K14761 rlbA; ribosome-associated protein
D GF1_04530 putative RNA-binding protein K07574 yhbY; RNA-binding protein
D GF1_00120 ychF; ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:ddu03016]
D GF1_01370 ccaA; poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D GF1_28010 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D GF1_13020 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GF1_23080 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GF1_15850 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GF1_13690 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GF1_00160 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GF1_13010 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GF1_08050 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GF1_05110 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GF1_02630 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GF1_25220 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GF1_05890 hypothetical protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GF1_19090 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GF1_01630 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GF1_07220 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GF1_02870 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GF1_02640 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GF1_19130 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GF1_19140 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GF1_22430 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GF1_05190 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GF1_29460 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D GF1_01200 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GF1_05790 hypothetical protein K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D GF1_01450 hypothetical protein K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D GF1_21830 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GF1_14560 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GF1_24740 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D GF1_24820 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GF1_26350 hypothetical protein K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D GF1_24780 hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D GF1_03380 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D GF1_02890 hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D GF1_27350 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GF1_19510 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GF1_18020 cumB; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D GF1_14610 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D GF1_29250 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D GF1_24680 cmoA; carboxy-S-adenosyl-L-methionine synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D GF1_05670 hypothetical protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D GF1_15780 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D GF1_14510 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D GF1_29240 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GF1_30700 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D GF1_22180 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D GF1_01580 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GF1_09830 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D GF1_01590 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D GF1_30830 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D GF1_29130 tgt-2; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D GF1_23100 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D GF1_17230 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D GF1_14820 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D GF1_01480 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ddu03012]
D GF1_01420 hypothetical protein K02519 infB; translation initiation factor IF-2
D GF1_19100 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GF1_02930 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D GF1_23170 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D GF1_23490 tuf-2_1; elongation factor Tu K02358 tuf; elongation factor Tu
D GF1_23620 tuf-2_2; elongation factor Tu K02358 tuf; elongation factor Tu
D GF1_12770 fusA-1; elongation factor G K02355 fusA; elongation factor G
D GF1_23500 fusA2_1; elongation factor G 2 K02355 fusA; elongation factor G
D GF1_27080 fusA2_2; elongation factor G 2 K02355 fusA; elongation factor G
D GF1_06960 selB; selenocysteine-specific translation factor K03833 selB; selenocysteine-specific elongation factor
D GF1_13150 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D GF1_23150 frr; ribosome-recycling factor K02838 frr; ribosome recycling factor
D GF1_13160 prmC; release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D GF1_13080 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D GF1_23250 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D GF1_24940 efp2; elongation factor P 2 K02356 efp; elongation factor P
D GF1_24930 genX; EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D GF1_02840 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D GF1_13650 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:ddu03110]
D GF1_02730 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D GF1_24140 clpB; chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D GF1_11850 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D GF1_13360 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D GF1_00040 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D GF1_21340 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D GF1_05180 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GF1_27920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GF1_19570 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GF1_14870 integrase K05516 cbpA; curved DNA-binding protein
D GF1_25540 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D GF1_05730 hypothetical protein K13993 HSP20; HSP20 family protein
D GF1_29280 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein
D GF1_21980 hslR; heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D GF1_27910 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D GF1_29060 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D GF1_05400 ftsH-2_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GF1_09410 ftsH-2_2; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GF1_19810 ftsH-2_3; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GF1_29350 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GF1_03390 ftsH-1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GF1_25660 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GF1_18040 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D GF1_23040 peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D GF1_13840 peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D GF1_29100 peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D GF1_25700 trx; thioredoxin K03671 TXN; thioredoxin
D GF1_07490 thiol reductase thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D GF1_16240 protein disulfide-isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
C 04131 Membrane trafficking [BR:ddu04131]
D GF1_17980 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GF1_25490 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GF1_27170 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GF1_27480 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GF1_00040 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D GF1_15080 hypothetical protein K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1
C 04121 Ubiquitin system
C 03051 Proteasome [BR:ddu03051]
D GF1_00040 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ddu03032]
D GF1_16950 hupB_1; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D GF1_17160 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D GF1_24840 hupB_2; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D GF1_10400 ihfA-2; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GF1_19150 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GF1_25620 ihfB-1; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GF1_28900 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GF1_13700 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GF1_14880 ssb_1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GF1_16860 ssb_2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GF1_13540 dnaE; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GF1_24530 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GF1_30800 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GF1_30790 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GF1_14660 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GF1_14670 DNA topoisomerase (ATP-hydrolyzing) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GF1_04670 topB; DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ddu03036]
D GF1_02910 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GF1_16950 hupB_1; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D GF1_17160 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D GF1_24840 hupB_2; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D GF1_10400 ihfA-2; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GF1_19150 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GF1_25620 ihfB-1; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GF1_28900 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GF1_14870 integrase K05516 cbpA; curved DNA-binding protein
D GF1_25540 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D GF1_20620 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GF1_12650 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GF1_23680 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D GF1_20610 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GF1_23950 mreB-1; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GF1_23910 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D GF1_30900 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D GF1_30890 spoOJ; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GF1_14660 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GF1_14670 DNA topoisomerase (ATP-hydrolyzing) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GF1_24820 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GF1_05670 hypothetical protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D GF1_13340 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D GF1_01560 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D GF1_00250 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D GF1_13870 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ddu03400]
D GF1_04810 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D GF1_07130 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GF1_07140 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GF1_22480 mutT; 7,8-dihydro-8-oxoguanine triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D GF1_22710 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D GF1_01250 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D GF1_01540 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GF1_03600 ada; bifunctional transcriptional activator/DNA repair enzyme protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D GF1_00900 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GF1_00210 nfo; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D GF1_24530 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GF1_27320 hypothetical protein K03701 uvrA; excinuclease ABC subunit A
D GF1_15500 hypothetical protein K03702 uvrB; excinuclease ABC subunit B
D GF1_18340 hypothetical protein K03703 uvrC; excinuclease ABC subunit C
D GF1_07270 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GF1_23540 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GF1_23530 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GF1_23210 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GF1_19580 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GF1_32340 hypothetical protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GF1_24970 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GF1_04860 hypothetical protein K03572 mutL; DNA mismatch repair protein MutL
D GF1_15290 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GF1_13330 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GF1_13540 dnaE; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GF1_14880 ssb_1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GF1_16860 ssb_2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GF1_28120 recD; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GF1_29270 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA
D GF1_20780 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GF1_20770 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GF1_20790 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D GF1_14020 hypothetical protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D GF1_32050 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D GF1_17990 recR; recombination protein RecR K06187 recR; recombination protein RecR
D GF1_20880 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D GF1_30920 hypothetical protein K03554 rdgC; recombination associated protein RdgC
D GF1_28720 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D GF1_30800 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GF1_30790 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GF1_16950 hupB_1; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D GF1_17160 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D GF1_24840 hupB_2; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D GF1_10400 ihfA-2; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GF1_19150 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GF1_25620 ihfB-1; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GF1_28900 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GF1_17600 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GF1_19370 dinB_1; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D GF1_29830 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D GF1_01950 yoaA; helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D GF1_12040 nrdJ; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ddu03029]
D GF1_01420 hypothetical protein K02519 infB; translation initiation factor IF-2
D GF1_19100 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GF1_23170 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D GF1_23490 tuf-2_1; elongation factor Tu K02358 tuf; elongation factor Tu
D GF1_23620 tuf-2_2; elongation factor Tu K02358 tuf; elongation factor Tu
D GF1_12770 fusA-1; elongation factor G K02355 fusA; elongation factor G
D GF1_23500 fusA2_1; elongation factor G 2 K02355 fusA; elongation factor G
D GF1_27080 fusA2_2; elongation factor G 2 K02355 fusA; elongation factor G
D GF1_12200 era; GTPase Era K03595 era; GTPase
D GF1_22430 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GF1_13690 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GF1_02630 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GF1_08050 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GF1_30640 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GF1_30940 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GF1_30650 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GF1_14880 ssb_1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GF1_16860 ssb_2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GF1_21340 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D GF1_05180 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GF1_27920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GF1_27910 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D GF1_19570 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GF1_21830 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GF1_00040 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ddu02000]
D GF1_21920 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GF1_15150 xenobiotic ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D GF1_01130 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D GF1_28580 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D GF1_28590 modB; molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein
D GF1_28600 modC; molybdate-transporting ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D GF1_07700 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D GF1_07710 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D GF1_04930 hypothetical protein K11071 potB; spermidine/putrescine transport system permease protein
D GF1_04940 potA; spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D GF1_10970 proX; glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D GF1_10960 glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D GF1_10950 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D GF1_13520 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D GF1_13510 ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D GF1_31530 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D GF1_31520 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D GF1_31510 ugpE; sn-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D GF1_31500 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D GF1_31550 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D GF1_31560 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D GF1_31570 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D GF1_31590 branched chain amino acid ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D GF1_20560 iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein
D GF1_20570 ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D GF1_15130 paraquat-inducible protein B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GF1_10180 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GF1_10160 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GF1_15110 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GF1_10170 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GF1_15120 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GF1_10200 organic solvent tolerance ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D GF1_31470 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GF1_31450 phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D GF1_31460 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D GF1_31480 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GF1_27740 phoD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D GF1_27750 phnE; phosphonate transporter PhnE K02042 phnE; phosphonate transport system permease protein
D GF1_27730 phnC; phosphonates import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D GF1_32150 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D GF1_32160 aapQ; amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D GF1_32170 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D GF1_32190 hypothetical protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D GF1_07420 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_24570 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_24580 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_31040 livK-1_2; branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_03300 livK-1_1; branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GF1_07410 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_24590 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_28670 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_31100 livH_2; branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_03310 livH_1; branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GF1_07400 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GF1_24600 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GF1_28660 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GF1_31070 livM_2; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GF1_07390 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_24610 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_28650 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_31060 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_03330 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GF1_07380 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GF1_24620 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GF1_28640 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GF1_03340 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GF1_22690 ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D GF1_22680 branched-chain amino acid ABC transporter permease K11960 urtB; urea transport system permease protein
D GF1_22670 urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D GF1_22660 ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D GF1_22650 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D GF1_04410 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D GF1_04420 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D GF1_04430 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D GF1_30380 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D GF1_30370 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D GF1_30360 amino acid ABC transporter ATPase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D GF1_31350 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D GF1_31360 dppB; peptide ABC transporter permease K12369 dppB; dipeptide transport system permease protein
D GF1_31370 dppC; dipeptide ABC transporter permease DppC K12370 dppC; dipeptide transport system permease protein
D GF1_31380 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D GF1_31390 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D GF1_14840 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D GF1_08460 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D GF1_08470 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D GF1_18330 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D GF1_26150 corrinoid ABC transporter permease K25133 hmuU; heme transport system permease protein
D GF1_26140 iron-dicitrate ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D GF1_24080 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D GF1_24070 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D GF1_27530 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D GF1_27500 cbiM; cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D GF1_27550 hypothetical protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D GF1_27520 ATP-dependent DNA ligase K10094 cbiK; nickel transport protein
D GF1_21550 hypothetical protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D GF1_31750 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D GF1_19230 membrane protein K25190 pltH; membrane fusion protein PltH
D GF1_19190 hypothetical protein K25180 ybhR; drug efflux transport system permease protein
D GF1_19210 hypothetical protein K25181 ybhS; drug efflux transport system permease protein
D GF1_19220 ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D GF1_05100 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D GF1_05080 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GF1_11390 ccmC; cytochrome C biogenesis protein CcmC K02195 ccmC; heme exporter protein C
D GF1_12650 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GF1_20100 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GF1_01870 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GF1_02970 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GF1_07210 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D GF1_10000 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D GF1_09800 hypothetical protein K10716 kch; voltage-gated potassium channel
D GF1_11780 potassium transporter TrkA K10716 kch; voltage-gated potassium channel
D GF1_01010 ammonium transporter K03320 amt; ammonium transporter, Amt family
D GF1_01020 amt_1; ammonium transporter K03320 amt; ammonium transporter, Amt family
D GF1_02500 amt_2; ammonium transporter K03320 amt; ammonium transporter, Amt family
D GF1_17790 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D GF1_20840 membrane protein K16053 ybdG; miniconductance mechanosensitive channel
D GF1_09170 motA-1; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D GF1_10570 Tol-Pal system subunit TolQ K03562 tolQ; biopolymer transport protein TolQ
D GF1_10580 protein TolR K03560 tolR; biopolymer transport protein TolR
D GF1_20470 chromosome condensation protein CcrB K06199 crcB; fluoride exporter
D GF1_12830 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GF1_03000 membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D GF1_29560 fieF; iron transporter K13283 fieF; ferrous-iron efflux pump FieF
D GF1_11020 zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family
D GF1_10810 membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D GF1_25990 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D GF1_25270 cation acetate symporter K14393 actP; cation/acetate symporter
D GF1_07840 nhaA; Na(+)/H(+) antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D GF1_30300 nhaP; Na(+)/H(+) antiporter NhaP K03316 nhaP; Na+:H+ antiporter
D GF1_17400 potassium transporter KefB K26735 KEA4_5_6; K+:H+ antiporter
D GF1_19030 potassium transporter TrkH K03498 trkH; trk/ktr system potassium uptake protein
D GF1_24810 Trk system potassium transporter TrkH K03498 trkH; trk/ktr system potassium uptake protein
D GF1_19020 potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D GF1_01750 uraA; uracil permease K02824 uraA; uracil permease
D GF1_08360 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D GF1_20320 hypothetical protein K03281 clcA; chloride channel protein, CIC family
D GF1_10880 dctP; C4-dicarboxylate ABC transporter K11688 dctP; C4-dicarboxylate-binding protein DctP
D GF1_10890 dctQ; C4-dicarboxylate ABC transporter permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D GF1_10900 dctM; C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D GF1_04490 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D GF1_22830 hypothetical protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D GF1_06760 acr3; arsenical-resistance protein K03325 ACR3; arsenite transporter
D GF1_12120 arsenite transporter K03325 ACR3; arsenite transporter
D GF1_15560 hypothetical protein K03325 ACR3; arsenite transporter
D GF1_31150 Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D GF1_31170 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D GF1_04320 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D GF1_04340 Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D GF1_12760 putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D GF1_01390 membrane protein K24180 mleP; malate permease and related proteins
D GF1_17380 hypothetical protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D GF1_03240 lysine transporter LysE K05835 rhtC; threonine efflux protein
D GF1_09690 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D GF1_09700 AzlD family membrane protein K26606 azlD; branched chain amino acid efflux pump
D GF1_29370 UPF0056 inner membrane protein K05595 marC; multiple antibiotic resistance protein
D GF1_31790 mntP; putative manganese efflux pump MntP K23242 mntP; manganese efflux pump family protein
D GF1_10600 tolB; protein TolB K03641 tolB; TolB protein
D GF1_06580 hypothetical protein K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D GF1_10120 thiosulfate reductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D GF1_30490 thiosulfate reductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D GF1_03950 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D GF1_03930 ttrB_2; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D GF1_06590 4Fe-4S ferredoxin K08358 ttrB; tetrathionate reductase subunit B
D GF1_01120 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D GF1_17580 iron transporter FeoA K04758 feoA; ferrous iron transport protein A
D GF1_17660 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:ddu02044]
D GF1_01130 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D GF1_01120 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D GF1_21590 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D GF1_00230 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D GF1_21710 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D GF1_21650 hypothetical protein K02462 gspM; general secretion pathway protein M
D GF1_26920 pilD; type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GF1_21860 pilB1_2; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D GF1_10420 pilC; type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D GF1_17330 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D GF1_28870 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D GF1_00170 YggT family protein K02221 yggT; YggT family protein
D GF1_00800 hypothetical protein K02237 comEA; competence protein ComEA
D GF1_18580 cytidine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D GF1_09030 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GF1_09040 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GF1_08610 hypothetical protein K04061 flhB2; flagellar biosynthesis protein
D GF1_09270 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D GF1_09240 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GF1_09130 hypothetical protein K02417 fliN; flagellar motor switch protein FliN
D GF1_09110 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GF1_09060 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GF1_16910 conjugal transfer protein TraG K12071 traD; conjugal transfer pilus assembly protein TraD
D GF1_16240 protein disulfide-isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D GF1_08080 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GF1_27130 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D GF1_23270 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GF1_15820 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GF1_07020 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D GF1_29140 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GF1_04750 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D GF1_04760 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
C 02042 Bacterial toxins [BR:ddu02042]
D GF1_12830 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GF1_13470 hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:ddu02022]
D GF1_31430 phoB; DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D GF1_18780 czcR; DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D GF1_17670 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D GF1_12090 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D GF1_12080 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D GF1_11190 acetoacetate metabolism regulatory protein AtoC K07713 zraR; two-component system, NtrC family, response regulator HydG
D GF1_28320 hypothetical protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D GF1_05140 acetoacetate metabolism regulatory protein AtoC K07713 zraR; two-component system, NtrC family, response regulator HydG
D GF1_11530 acetoacetate metabolism regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D GF1_19910 atoC; acetoacetate metabolism regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D GF1_20050 acetoacetate metabolism regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D GF1_13190 pilR; acetoacetate metabolism regulatory protein AtoC K02667 pilR; two-component system, NtrC family, response regulator PilR
D GF1_00850 transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D GF1_10870 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D GF1_06610 sigma-54-dependent Fis family transcriptional regulator K02481 flgR; two-component system, NtrC family, response regulator
D GF1_07470 acetoacetate metabolism regulatory protein AtoC K02481 flgR; two-component system, NtrC family, response regulator
D GF1_18030 acetoacetate metabolism regulatory protein AtoC K02481 flgR; two-component system, NtrC family, response regulator
D GF1_32020 sigma-54-dependent Fis family transcriptional regulator K02481 flgR; two-component system, NtrC family, response regulator
D GF1_03910 sigma-54-dependent Fis family transcriptional regulator K02481 flgR; two-component system, NtrC family, response regulator
D GF1_09330 cheY64H-1; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GF1_23980 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D GF1_28530 DNA-binding response regulator K15012 regA; two-component system, response regulator RegA
C 02035 Bacterial motility proteins [BR:ddu02035]
D GF1_09340 cheX64H_1; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D GF1_13770 cheR1; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D GF1_09330 cheY64H-1; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GF1_09240 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GF1_09110 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GF1_09060 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GF1_09030 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GF1_09040 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GF1_09260 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GF1_09130 hypothetical protein K02417 fliN; flagellar motor switch protein FliN
D GF1_09270 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D GF1_08940 flgI; flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D GF1_08950 flgH; flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D GF1_09280 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D GF1_09300 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D GF1_09290 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D GF1_08980 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D GF1_08970 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D GF1_09180 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D GF1_08700 fliC_1; flagellin K02406 fliC; flagellin
D GF1_08710 fliC_2; flagellin K02406 fliC; flagellin
D GF1_09000 fliA; DNA-directed RNA polymerase sigma-70 factor K02405 fliA; RNA polymerase sigma factor FliA
D GF1_09170 motA-1; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D GF1_09010 flhG; site-determining protein K04562 flhG; flagellar biosynthesis protein FlhG
D GF1_13190 pilR; acetoacetate metabolism regulatory protein AtoC K02667 pilR; two-component system, NtrC family, response regulator PilR
D GF1_17330 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D GF1_28870 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D GF1_21860 pilB1_2; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D GF1_10420 pilC; type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D GF1_26920 pilD; type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ddu04812]
D GF1_07230 MEMO1 family protein K06990 MEMO1; MEMO1 family protein
D GF1_23950 mreB-1; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GF1_20610 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GF1_20620 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GF1_30900 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D GF1_30890 spoOJ; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ddu04147]
D GF1_00040 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D GF1_10410 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GF1_25490 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GF1_27170 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GF1_27150 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GF1_27480 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GF1_30430 prx-2; peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D GF1_27920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GF1_21340 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D GF1_05180 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GF1_25920 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GF1_28920 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GF1_23490 tuf-2_1; elongation factor Tu K02358 tuf; elongation factor Tu
D GF1_23620 tuf-2_2; elongation factor Tu K02358 tuf; elongation factor Tu
D GF1_01200 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GF1_01340 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GF1_05600 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GF1_02090 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GF1_31820 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GF1_31810 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GF1_12860 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GF1_31540 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D GF1_01050 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GF1_12070 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GF1_05530 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GF1_13030 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GF1_24290 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GF1_32280 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D GF1_11500 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GF1_27140 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:ddu02048]
D GF1_28720 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D GF1_28710 cas2; CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D GF1_28780 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D GF1_28730 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D GF1_28760 type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1
D GF1_28750 type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2
D GF1_28770 type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d
D GF1_16740 protein killer protein K07334 higB-1; toxin HigB-1
D GF1_16730 transcriptional regulator K21498 higA-1; antitoxin HigA-1
D GF1_20610 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GF1_23950 mreB-1; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GF1_14660 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GF1_14670 DNA topoisomerase (ATP-hydrolyzing) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GF1_13020 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GF1_21830 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ddu01504]
D GF1_18780 czcR; DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D GF1_03000 membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ddu03100]
D GF1_r00010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GF1_r00030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D GF1_25080 hypothetical protein K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D GF1_31090 iorA-2; indolepyruvate oxidoreductase subunit IorA K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D GF1_03260 iorA-1; indolepyruvate oxidoreductase subunit IorA K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D GF1_31080 iorB-2; indolepyruvate oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D GF1_03270 iorB-1; indolepyruvate oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D GF1_15900 peptide-methionine (R)-S-oxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D GF1_02220 tpx; putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D GF1_17920 NADH ubiquinone oxidoreductase K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2]
D GF1_30440 dfx; desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D GF1_02570 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D GF1_14240 hypothetical protein K22341 fdhF2; formate dehydrogenase (NAD+, ferredoxin) subunit [EC:1.17.1.11]
D GF1_06750 arsC_1; arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D GF1_15590 arsC_2; arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D GF1_12230 glycyl-radical enzyme activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D GF1_11260 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D GF1_29940 pcm_2; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D GF1_00060 pcm_1; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D GF1_24040 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D GF1_25110 fabH; 3-oxoacyl-ACP synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D GF1_20260 sucrose phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352]
D GF1_25760 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxyl ate carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D GF1_24830 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D GF1_18530 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D GF1_07070 membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D GF1_08350 phosphoglycerate mutase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D GF1_14630 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D GF1_18990 hypothetical protein K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D GF1_10460 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GF1_28270 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D GF1_17760 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D GF1_26840 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D GF1_25100 haloalkane dehalogenase K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114]
D GF1_14960 yjeF; bifunctional NAD(P)H-hydrate repair enzyme K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D GF1_17170 adenine nucleotide alpha hydrolase K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D GF1_28290 UPF0272 protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D GF1_18300 peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D GF1_05360 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D GF1_25090 peptide synthase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]
D GF1_06270 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D GF1_10550 accC2; acetyl-CoA carboxylase subunit alpha K20141 cfiB; 2-oxoglutarate carboxylase small subunit [EC:6.4.1.7]
C 99981 Carbohydrate metabolism
D GF1_27180 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D GF1_20370 membrane protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D GF1_26370 hypothetical protein K05337 fer; ferredoxin
D GF1_21820 nitrogen fixation protein NifU K13819 K13819; NifU-like protein
D GF1_02270 nifB_1; nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D GF1_02280 nifN; nitrogenase K02592 nifN; nitrogenase molybdenum-iron protein NifN
D GF1_02290 nitrogenase molybdenum-cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D GF1_23650 heterodisulfide reductase subunit A K16885 qmoA; quinone-modifying oxidoreductase, subunit QmoA
D GF1_23640 heterodisulfide reductase subunit A K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB
D GF1_23630 heterodisulfide reductase subunit E K16887 qmoC; quinone-modifying oxidoreductase, subunit QmoC
D GF1_24490 dsvC; sulfite reductase, dissimilatory-type subunit gamma K23077 dsrC; dissimilatory sulfite reductase related protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D GF1_10450 yggS; YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D GF1_09710 cspC; cold-shock protein K03704 cspA; cold shock protein
D GF1_17210 cold-shock protein K03704 cspA; cold shock protein
D GF1_02410 nitrogen fixation nifHD region glnB 1 K02589 nifHD1; nitrogen regulatory protein PII 1
D GF1_02400 P-II family nitrogen regulator K02590 nifHD2; nitrogen regulatory protein PII 2
D GF1_22320 hypothetical protein K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D GF1_21260 MBL fold hydrolase K07576 K07576; metallo-beta-lactamase family protein
D GF1_29290 MBL fold hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D GF1_02740 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D GF1_22600 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D GF1_22590 ureF; urease accessory protein UreF K03188 ureF; urease accessory protein
D GF1_22580 ureG-2; urease accessory protein UreG K03189 ureG; urease accessory protein
D GF1_22640 ureD; urease accessory protein UreD K03190 ureD; urease accessory protein
D GF1_00240 hypothetical protein K03664 smpB; SsrA-binding protein
D GF1_18270 hypC; hydrogenase assembly protein HypC K04653 hypC; hydrogenase expression/formation protein HypC
D GF1_18280 hypD; hydrogenase expression/formation protein K04654 hypD; hydrogenase expression/formation protein HypD
D GF1_18290 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D GF1_18260 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D GF1_09870 hypothetical protein K07391 comM; magnesium chelatase family protein
D GF1_22820 serine protease K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D GF1_22750 HNH endonuclease K07454 K07454; putative restriction endonuclease
D GF1_16840 UPF0758 protein K03630 radC; DNA repair protein RadC
D GF1_30950 UPF0758 protein K03630 radC; DNA repair protein RadC
D GF1_25560 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D GF1_24110 endonuclease III K07457 K07457; endonuclease III related protein
D GF1_25940 dprA; DNA polymerase K04096 smf; DNA processing protein
D GF1_22030 rarA; ATPase AAA K07478 ycaJ; putative ATPase
D GF1_16610 IS5 family transposase K07481 K07481; transposase, IS5 family
D GF1_18130 IS5 family transposase K07481 K07481; transposase, IS5 family
D GF1_15970 ISL3 family transposase K07485 K07485; transposase
D GF1_16590 ISL3 family transposase K07485 K07485; transposase
D GF1_17060 ISL3 family transposase K07485 K07485; transposase
D GF1_17140 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D GF1_18000 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D GF1_06240 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D GF1_12660 carbon monoxide dehydrogenase K07321 cooC; CO dehydrogenase maturation factor
D GF1_22090 carbon monoxide dehydrogenase K07321 cooC; CO dehydrogenase maturation factor
D GF1_12630 peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
D GF1_08590 mglA; cell polarity determinant GTPase MglA K24105 mglA; mutual gliding-motility protein MglA
C 99995 Signaling proteins
D GF1_01240 typA; GTP-binding protein K06207 typA; GTP-binding protein
D GF1_11800 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D GF1_10190 hypothetical protein K04754 mlaA; phospholipid-binding lipoprotein MlaA
C 99994 Others
D GF1_14740 cutA; divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D GF1_27800 phnK; ABC transporter ATP-binding protein K05781 phnK; putative phosphonate transport system ATP-binding protein
D GF1_07830 hemerythrin K07216 hr; hemerythrin
D GF1_07900 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
B
B 09194 Poorly characterized
C 99996 General function prediction only
D GF1_10640 hypothetical protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D GF1_29610 csaA; tRNA-binding protein K06878 K06878; tRNA-binding protein
D GF1_03250 patatin family protein K07001 K07001; NTE family protein
D GF1_14100 hypothetical protein K03744 lemA; LemA protein
D GF1_17560 creA; protein CreA K05805 creA; CreA protein
D GF1_03860 yjdF; membrane protein K08984 yjdF; putative membrane protein
C 99997 Function unknown
D GF1_09790 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein
D GF1_22080 ybhL; membrane protein K06890 K06890; uncharacterized protein
D GF1_27340 CoA-binding protein K06929 K06929; uncharacterized protein
D GF1_20400 hypothetical protein K06940 K06940; uncharacterized protein
D GF1_11350 phosphohydrolase K06951 K06951; uncharacterized protein
D GF1_15800 UPF0109 protein K06960 K06960; uncharacterized protein
D GF1_25750 hypothetical protein K07028 K07028; uncharacterized protein
D GF1_16120 DNA polymerase subunit beta K07075 K07075; uncharacterized protein
D GF1_21610 nucleotidyltransferase K07075 K07075; uncharacterized protein
D GF1_22560 oxidoreductase K07079 K07079; uncharacterized protein
D GF1_14400 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein
D GF1_06650 hypothetical protein K07089 K07089; uncharacterized protein
D GF1_02620 permease K07089 K07089; uncharacterized protein
D GF1_31930 hypothetical protein K07090 K07090; uncharacterized protein
D GF1_32010 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein
D GF1_04440 ATPase K07133 K07133; uncharacterized protein
D GF1_24160 hypothetical protein K07137 K07137; uncharacterized protein
D GF1_24770 hypothetical protein K08998 K08998; uncharacterized protein
D GF1_04100 hypothetical protein K09004 K09004; uncharacterized protein
D GF1_03410 hypothetical protein K09122 K09122; uncharacterized protein
D GF1_00180 yggU; UPF0235 protein K09131 K09131; uncharacterized protein
D GF1_20460 hypothetical protein K09137 K09137; uncharacterized protein
D GF1_28410 TIGR00296 family protein K09141 K09141; uncharacterized protein
D GF1_07920 PFL family protein K09157 K09157; uncharacterized protein
D GF1_22930 hypothetical protein K09732 K09732; uncharacterized protein
D GF1_12990 UPF0178 protein K09768 K09768; uncharacterized protein
D GF1_21750 UPF0434 protein K09791 K09791; uncharacterized protein
D GF1_00940 hypothetical protein K09931 K09931; uncharacterized protein
D GF1_31000 hypothetical protein K09978 K09978; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 10, 2024