+D GENES KO
#
KEGG Orthology (KO) - Francisella philomiragia O#319-036
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:fpm00010]
D LA56_1796 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LA56_94 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_369 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_93 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_155 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LA56_1650 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D LA56_809 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LA56_1199 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LA56_812 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LA56_811 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LA56_139 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LA56_97 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LA56_302 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LA56_810 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LA56_1406 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D LA56_1005 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LA56_1004 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LA56_1003 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LA56_1750 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LA56_314 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LA56_301 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D LA56_1860 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LA56_17 phosphoenolpyruvate carboxykinase family protein K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:fpm00020]
D LA56_1208 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LA56_1190 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LA56_949 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LA56_1203 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D LA56_1202 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LA56_1003 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LA56_70 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LA56_71 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LA56_1205 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LA56_1204 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LA56_1207 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LA56_1206 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LA56_1688 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D LA56_1568 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LA56_545 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LA56_17 phosphoenolpyruvate carboxykinase family protein K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D LA56_1005 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LA56_1004 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:fpm00030]
D LA56_155 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LA56_690 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LA56_813 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LA56_493 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D LA56_206 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D LA56_1169 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D LA56_1355 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D LA56_1170 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D LA56_1860 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LA56_584 prs; ribose-phosphate diphosphokinase family protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LA56_809 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LA56_1650 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:fpm00040]
D LA56_683 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LA56_313 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LA56_690 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:fpm00051]
D LA56_137 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D LA56_1749 mannose-6-phosphate isomerase family protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LA56_908 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LA56_943 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D LA56_942 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LA56_940 rmlD substrate binding domain protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LA56_1650 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D LA56_809 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LA56_1199 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:fpm00052]
D LA56_301 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D LA56_334 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D LA56_335 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D LA56_688 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LA56_313 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LA56_1860 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LA56_1796 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LA56_94 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_369 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_93 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_1399 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism
D LA56_683 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:fpm00500]
D LA56_1399 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D LA56_313 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LA56_1861 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D LA56_1862 glgA; glycogen/starch synthase, ADP-glucose type family protein K00703 glgA; starch synthase [EC:2.4.1.21]
D LA56_1859 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D LA56_1863 glgP; glycogen/starch/alpha-glucan phosphorylases family protein K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D LA56_1858 pulA; pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D LA56_1864 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D LA56_808 trehalase family protein K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D LA56_1860 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LA56_1796 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LA56_94 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_369 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_93 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_155 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LA56_137 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:fpm00520]
D LA56_103 fibronectin type III domain protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D LA56_737 glycosyl hydrolases 18 family protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D LA56_106 carbohydrate binding domain protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D LA56_1040 glycosyl hydrolases 18 family protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D LA56_365 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LA56_260 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D LA56_279 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D LA56_137 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D LA56_258 glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LA56_1820 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LA56_1200 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D LA56_1819 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LA56_1046 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D LA56_806 hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D LA56_1787 EPSP synthase family protein K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LA56_1788 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LA56_1021 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D LA56_1020 nucleotide sugar dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D LA56_921 hexapeptide repeat of succinyl-transferase family protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D LA56_946 3-beta hydroxysteroid dehydrogenase/isomerase family protein K15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D LA56_930 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family protein K15913 pglD; UDP-N-acetylbacillosamine N-acetyltransferase [EC:2.3.1.203]
D LA56_1796 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LA56_94 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_369 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_93 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_1860 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LA56_313 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LA56_683 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LA56_334 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D LA56_335 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D LA56_688 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LA56_155 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LA56_1749 mannose-6-phosphate isomerase family protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LA56_908 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LA56_943 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D LA56_942 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LA56_940 rmlD substrate binding domain protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LA56_1861 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:fpm00620]
D LA56_314 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LA56_1005 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LA56_1004 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LA56_1003 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LA56_1750 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LA56_1468 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LA56_1469 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LA56_810 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LA56_1050 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LA56_40 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LA56_41 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LA56_1627 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LA56_1565 FMN-dependent dehydrogenase family protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D LA56_565 4Fe-4S dicluster domain protein K18930 dld; D-lactate dehydrogenase
D LA56_285 4Fe-4S dicluster domain protein K18930 dld; D-lactate dehydrogenase
D LA56_702 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D LA56_1690 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D LA56_862 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D LA56_1783 malic enzyme, NAD binding domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LA56_545 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LA56_1688 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D LA56_1568 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LA56_1559 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D LA56_17 phosphoenolpyruvate carboxykinase family protein K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D LA56_1406 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D LA56_1404 HMGL-like family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:fpm00630]
D LA56_314 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LA56_545 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LA56_1208 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LA56_1190 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LA56_523 catalase family protein K03781 katE; catalase [EC:1.11.1.6]
D LA56_58 HAD hydrolase, IA, variant 1 family protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D LA56_1518 gLN1; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LA56_734 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LA56_1849 cys/Met metabolism PLP-dependent enzyme family protein K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D LA56_1850 beta-eliminating lyase family protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D LA56_1847 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LA56_1003 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LA56_1848 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D LA56_197 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D LA56_105 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:fpm00640]
D LA56_314 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LA56_1468 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LA56_1469 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LA56_1003 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LA56_1050 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LA56_40 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LA56_41 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LA56_1627 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LA56_71 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LA56_70 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:fpm00650]
D LA56_953 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LA56_1205 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LA56_1204 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LA56_1207 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LA56_1206 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LA56_1276 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LA56_1470 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LA56_366 short chain dehydrogenase family protein K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D LA56_367 putative acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D LA56_838 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LA56_612 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LA56_611 ACT domain protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:fpm00660]
D LA56_838 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LA56_612 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LA56_611 ACT domain protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D LA56_71 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LA56_70 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LA56_1403 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D LA56_1402 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D LA56_1401 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:fpm00562]
D LA56_826 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LA56_1199 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:fpm00190]
D LA56_1249 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 family protein K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D LA56_1248 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D LA56_1247 nuoC; NADH dehydrogenase K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D LA56_1246 nuoD; NADH dehydrogenase (quinone), D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D LA56_1245 nuoE; NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D LA56_1244 nuoF; NADH oxidoreductase (quinone), F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D LA56_1243 nuoG; NADH dehydrogenase (quinone), G subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D LA56_1242 NADH dehydrogenase family protein K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D LA56_1241 NADH-quinone oxidoreductase, chain I family protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D LA56_1240 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D LA56_1239 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L family protein K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D LA56_1238 proton-translocating NADH-quinone oxidoreductase, chain L family protein K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D LA56_1237 proton-translocating NADH-quinone oxidoreductase, chain M family protein K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D LA56_1236 proton-translocating NADH-quinone oxidoreductase, chain N family protein K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D LA56_1205 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LA56_1204 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LA56_1207 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LA56_1206 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LA56_1541 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LA56_1185 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LA56_1540 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LA56_1186 cytochrome oxidase subunit II family protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LA56_1217 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LA56_1215 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LA56_1216 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LA56_1218 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LA56_1214 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LA56_1221 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LA56_1219 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LA56_1220 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LA56_134 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D LA56_462 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D LA56_988 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:fpm00680]
D LA56_1750 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LA56_734 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LA56_97 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LA56_302 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LA56_1559 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D LA56_545 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LA56_809 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LA56_1650 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D LA56_1468 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LA56_1469 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LA56_314 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LA56_139 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LA56_727 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LA56_347 aminotransferase class-V family protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LA56_175 HAD phosphoserine phosphatase-like hydrolase, IB family protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:fpm00910]
D LA56_1073 gdh; NAD-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D LA56_1518 gLN1; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LA56_634 carbonic anhydrase family protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:fpm00920]
D LA56_1350 pyridine nucleotide-disulfide oxidoreductase family protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D LA56_882 metallo-beta-lactamase superfamily protein K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
D LA56_1463 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LA56_1572 hexapeptide repeat of succinyl-transferase family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D LA56_1574 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LA56_1854 homoserine O-succinyltransferase family protein K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:fpm00061]
D LA56_1050 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LA56_40 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LA56_41 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LA56_1627 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LA56_1095 phosphopantetheine attachment site family protein K02078 acpP; acyl carrier protein
D LA56_1096 phosphopantetheine attachment site family protein K02078 acpP; acyl carrier protein
D LA56_820 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D LA56_818 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LA56_817 fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LA56_1092 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D LA56_1089 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LA56_821 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LA56_1090 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LA56_819 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LA56_993 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LA56_1099 fabA-like domain protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LA56_697 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LA56_750 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LA56_951 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:fpm00071]
D LA56_954 acetyl-CoA C-acyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LA56_953 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LA56_952 hypothetical protein K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D LA56_750 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LA56_951 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LA56_1750 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:fpm00121]
D LA56_512 linear amide C-N hydrolase, choloylglycine hydrolase family protein K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:fpm00561]
D LA56_1155 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D LA56_816 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D LA56_651 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LA56_1326 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LA56_1327 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LA56_1430 prokaryotic diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:fpm00564]
D LA56_1738 ketopantoate reductase PanE/ApbA family protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D LA56_1154 FAD dependent oxidoreductase family protein K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D LA56_651 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LA56_1326 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LA56_1327 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LA56_1430 prokaryotic diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D LA56_115 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D LA56_659 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D LA56_1580 cytidylyltransferase family protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D LA56_987 CDP-alcohol phosphatidyltransferase family protein K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D LA56_1703 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LA56_1815 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D LA56_1582 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D LA56_432 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D LA56_433 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:fpm00600]
D LA56_260 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:fpm00592]
D LA56_954 acetyl-CoA C-acyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:fpm01040]
D LA56_1132 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LA56_977 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:fpm00230]
D LA56_1170 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D LA56_1860 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LA56_584 prs; ribose-phosphate diphosphokinase family protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LA56_1275 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D LA56_1759 purD; phosphoribosylamine--glycine ligase K13713 purCD; fusion protein PurCD [EC:6.3.2.6 6.3.4.13]
D LA56_1760 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D LA56_1322 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D LA56_1274 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D LA56_1758 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D LA56_1763 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D LA56_1761 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D LA56_1267 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D LA56_1522 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LA56_1201 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D LA56_161 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D LA56_263 multi-copper polyphenol oxidoreductase laccase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LA56_1524 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D LA56_153 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LA56_1626 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LA56_984 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D LA56_454 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LA56_887 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D LA56_340 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D LA56_546 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LA56_548 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LA56_109 dgt; dGTPase family protein K01129 dgt; dGTPase [EC:3.1.5.1]
D LA56_664 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LA56_905 ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D LA56_1059 RelA/SpoT family protein K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D LA56_1523 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D LA56_286 adenylate kinase family protein K00939 adk; adenylate kinase [EC:2.7.4.3]
D LA56_38 apaH; hapa bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D LA56_839 HIUase/Transthyretin family protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 00240 Pyrimidine metabolism [PATH:fpm00240]
D LA56_1378 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LA56_1379 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LA56_1377 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D LA56_1383 pyrC; dihydroorotase, multifunctional complex type domain protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D LA56_1393 dihydroorotate dehydrogenase family protein K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D LA56_9 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D LA56_1392 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D LA56_1577 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D LA56_1626 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LA56_1625 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D LA56_345 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D LA56_88 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D LA56_144 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D LA56_104 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D LA56_143 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D LA56_429 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D LA56_546 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LA56_548 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LA56_1166 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D LA56_1581 dut; dUTP diphosphatase family protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LA56_276 thymidine kinase family protein K00857 tdk; thymidine kinase [EC:2.7.1.21]
D LA56_726 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:fpm00250]
D LA56_282 cys/Met metabolism PLP-dependent enzyme family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1751 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1302 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_343 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D LA56_635 L-asparaginase, type I family protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D LA56_32 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D LA56_674 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D LA56_875 carbon-nitrogen hydrolase family protein K13566 NIT2; omega-amidase [EC:3.5.1.3]
D LA56_1696 aspD; aspartate 4-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D LA56_1623 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LA56_1622 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LA56_1523 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D LA56_1267 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D LA56_1377 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D LA56_1276 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LA56_1470 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LA56_1073 gdh; NAD-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D LA56_297 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LA56_1518 gLN1; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LA56_1378 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LA56_1379 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LA56_1517 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D LA56_258 glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LA56_1820 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LA56_1275 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:fpm00260]
D LA56_1307 aspartate kinase domain protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LA56_1251 aspartate kinase domain protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LA56_5 aspartate kinase domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D LA56_4 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LA56_6 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D LA56_7 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D LA56_614 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D LA56_734 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LA56_139 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LA56_727 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LA56_347 aminotransferase class-V family protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LA56_175 HAD phosphoserine phosphatase-like hydrolase, IB family protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D LA56_102 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D LA56_101 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D LA56_1849 cys/Met metabolism PLP-dependent enzyme family protein K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D LA56_1850 beta-eliminating lyase family protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D LA56_1847 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LA56_1003 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LA56_1848 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D LA56_197 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D LA56_1703 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LA56_1471 homocysteine S-methyltransferase family protein K00544 BHMT; betaine-homocysteine S-methyltransferase [EC:2.1.1.5]
D LA56_184 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D LA56_1318 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D LA56_1316 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D LA56_1252 2,4-diaminobutyrate 4-transaminase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D LA56_1253 beta-eliminating lyase family protein K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:fpm00270]
D LA56_1572 hexapeptide repeat of succinyl-transferase family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D LA56_1574 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LA56_1471 homocysteine S-methyltransferase family protein K00544 BHMT; betaine-homocysteine S-methyltransferase [EC:2.1.1.5]
D LA56_1131 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LA56_1828 mtnN; MTA/SAH nucleosidase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D LA56_263 multi-copper polyphenol oxidoreductase laccase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LA56_253 pyridoxal-phosphate dependent enzyme family protein K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D LA56_1307 aspartate kinase domain protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LA56_1251 aspartate kinase domain protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LA56_5 aspartate kinase domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D LA56_4 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LA56_1854 homoserine O-succinyltransferase family protein K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D LA56_1853 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D LA56_1405 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LA56_1632 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D LA56_360 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D LA56_282 cys/Met metabolism PLP-dependent enzyme family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1751 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1302 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1463 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LA56_1696 aspD; aspartate 4-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D LA56_545 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LA56_184 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D LA56_727 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LA56_347 aminotransferase class-V family protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:fpm00280]
D LA56_1405 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LA56_1003 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LA56_954 acetyl-CoA C-acyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:fpm00290]
D LA56_1403 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D LA56_1402 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D LA56_1401 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D LA56_838 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LA56_612 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LA56_611 ACT domain protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D LA56_610 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D LA56_613 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D LA56_1405 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LA56_1404 HMGL-like family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:fpm00300]
D LA56_1307 aspartate kinase domain protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LA56_1251 aspartate kinase domain protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LA56_5 aspartate kinase domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D LA56_4 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LA56_1305 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LA56_1306 dihydrodipicolinate reductase, family protein K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D LA56_1304 hexapeptide repeat of succinyl-transferase family protein K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D LA56_1303 hypothetical protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D LA56_1071 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D LA56_2 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:fpm00310]
D LA56_528 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D LA56_1202 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LA56_1003 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LA56_1846 cadA; lysine decarboxylase, inducible K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D LA56_1470 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:fpm00220]
D LA56_1616 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D LA56_1623 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LA56_1622 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LA56_959 arginase family protein K01476 rocF; arginase [EC:3.5.3.1]
D LA56_1517 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D LA56_1518 gLN1; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LA56_1378 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LA56_1379 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LA56_1073 gdh; NAD-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D LA56_282 cys/Met metabolism PLP-dependent enzyme family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1751 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1302 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1618 argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D LA56_1617 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D LA56_1619 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
C 00330 Arginine and proline metabolism [PATH:fpm00330]
D LA56_959 arginase family protein K01476 rocF; arginase [EC:3.5.3.1]
D LA56_1621 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D LA56_983 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D LA56_297 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LA56_960 ornithine cyclodeaminase/mu-crystallin family protein K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D LA56_1563 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D LA56_1564 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D LA56_1308 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LA56_282 cys/Met metabolism PLP-dependent enzyme family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1751 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1302 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:fpm00340]
D LA56_233 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D LA56_240 hisE; phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D LA56_238 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D LA56_237 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D LA56_239 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D LA56_236 hisB; histidinol-phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D LA56_235 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LA56_234 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:fpm00350]
D LA56_282 cys/Met metabolism PLP-dependent enzyme family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1751 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1302 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_235 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LA56_1750 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LA56_1470 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:fpm00360]
D LA56_282 cys/Met metabolism PLP-dependent enzyme family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1751 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1302 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_235 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LA56_111 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:fpm00380]
D LA56_1202 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LA56_1003 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LA56_1459 thiamine pyrophosphate enzyme, central domain protein K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D LA56_523 catalase family protein K03781 katE; catalase [EC:1.11.1.6]
D LA56_111 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:fpm00400]
D LA56_404 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LA56_293 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D LA56_39 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D LA56_1417 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D LA56_292 aroK; shikimate kinase 1 K00891 aroK; shikimate kinase [EC:2.7.1.71]
D LA56_638 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D LA56_1742 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D LA56_1362 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D LA56_382 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D LA56_1361 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D LA56_1360 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D LA56_1357 indole-3-glycerol phosphate synthase family protein K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D LA56_1318 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D LA56_1316 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D LA56_1390 chorismate mutase type II family protein K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D LA56_1702 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D LA56_1394 prephenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D LA56_1538 bacterial extracellular solute-binding s, 3 family protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D LA56_181 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D LA56_282 cys/Met metabolism PLP-dependent enzyme family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1751 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1302 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_235 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:fpm00410]
D LA56_834 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D LA56_1276 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LA56_833 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:fpm00430]
D LA56_1276 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LA56_249 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LA56_1469 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LA56_1468 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:fpm00450]
D LA56_185 sufS; cysteine desulfurase, SufS family protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D LA56_57 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D LA56_1802 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:fpm00460]
D LA56_249 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LA56_635 L-asparaginase, type I family protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D LA56_32 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D LA56_674 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D LA56_734 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:fpm00470]
D LA56_179 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LA56_1665 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LA56_1507 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LA56_1517 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D LA56_217 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D LA56_19 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LA56_519 enzyme of enolase superfamily protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D LA56_1303 hypothetical protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D LA56_1071 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:fpm00480]
D LA56_249 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LA56_1426 allophanate hydrolase subunit 1 family protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D LA56_1632 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D LA56_360 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D LA56_152 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LA56_494 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LA56_1356 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D LA56_393 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D LA56_949 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LA56_521 glutathione peroxidase family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:fpm00511]
D LA56_260 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:fpm00540]
D LA56_992 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D LA56_1512 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D LA56_994 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LA56_1542 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LA56_8 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D LA56_991 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D LA56_1173 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D LA56_691 sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D LA56_87 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D LA56_461 hydrolase, HAD super, subfamily III A K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D LA56_331 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D LA56_985 glycosyl transferases group 1 family protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D LA56_1411 bacterial lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LA56_1410 bacterial lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LA56_1429 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D LA56_1445 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:fpm00541]
D LA56_313 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LA56_688 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LA56_683 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LA56_939 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LA56_936 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LA56_938 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LA56_937 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D LA56_932 wecE; TDP-4-keto-6-deoxy-D-glucose transaminase family protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D LA56_224 acetyltransferase domain protein K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D LA56_1749 mannose-6-phosphate isomerase family protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LA56_908 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LA56_943 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D LA56_942 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LA56_940 rmlD substrate binding domain protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LA56_1819 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LA56_1021 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D LA56_1020 nucleotide sugar dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D LA56_946 3-beta hydroxysteroid dehydrogenase/isomerase family protein K15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D LA56_921 hexapeptide repeat of succinyl-transferase family protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:fpm00550]
D LA56_1787 EPSP synthase family protein K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LA56_1788 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LA56_1418 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LA56_19 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LA56_1507 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LA56_2 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LA56_1579 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LA56_18 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LA56_196 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LA56_83 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LA56_463 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LA56_113 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LA56_471 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LA56_532 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:fpm00543]
D LA56_1572 hexapeptide repeat of succinyl-transferase family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D LA56_933 acyltransferase family protein K16568 exoZ; exopolysaccharide production protein ExoZ
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:fpm00730]
D LA56_723 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LA56_453 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D LA56_50 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LA56_154 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D LA56_286 adenylate kinase family protein K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:fpm00740]
D LA56_1454 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D LA56_1456 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D LA56_1453 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D LA56_1455 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D LA56_1782 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D LA56_713 PAP2 superfamily protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
C 00750 Vitamin B6 metabolism [PATH:fpm00750]
D LA56_1544 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D LA56_347 aminotransferase class-V family protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LA56_7 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D LA56_614 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D LA56_77 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D LA56_78 pdxT; pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:fpm00760]
D LA56_343 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D LA56_341 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D LA56_342 nadC; nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D LA56_161 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D LA56_1818 cytidyltransferase-like domain protein K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-]
D LA56_755 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D LA56_958 nicotinate phosphoribosyltransferase family protein K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
D LA56_891 ATP-NAD kinase family protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D LA56_575 pyridine nucleotide-disulfide oxidoreductase family protein K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D LA56_1470 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:fpm00770]
D LA56_838 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LA56_612 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LA56_611 ACT domain protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D LA56_610 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D LA56_613 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D LA56_832 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D LA56_831 hypothetical protein K24263 panG; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D LA56_833 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D LA56_1171 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D LA56_835 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D LA56_300 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D LA56_188 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D LA56_1037 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D LA56_1277 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D LA56_1405 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LA56_834 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:fpm00780]
D LA56_372 methyltransferase domain protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D LA56_1790 methyltransferase domain protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D LA56_1092 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D LA56_1089 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LA56_821 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LA56_1090 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LA56_819 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LA56_993 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LA56_1099 fabA-like domain protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LA56_697 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LA56_377 alpha/beta hydrolase fold family protein K19561 bioJ; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D LA56_373 aminotransferase class I and II family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LA56_1034 aminotransferase class I and II family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LA56_375 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D LA56_370 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D LA56_374 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D LA56_45 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D LA56_371 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:fpm00785]
D LA56_465 lipB; lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D LA56_599 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D LA56_569 lipoyltransferase and lipoate-ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D LA56_1003 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LA56_1005 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LA56_1004 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LA56_1203 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D LA56_1202 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LA56_1849 cys/Met metabolism PLP-dependent enzyme family protein K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D LA56_1850 beta-eliminating lyase family protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D LA56_1847 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LA56_1848 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D LA56_197 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:fpm00790]
D LA56_389 GTP cyclohydrolase I family protein K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D LA56_379 FolB domain protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D LA56_378 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15]
D LA56_1573 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LA56_1628 folC; bifunctional FolC family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D LA56_1454 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D LA56_381 pabB; aminodeoxychorismate synthase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
C 00670 One carbon pool by folate [PATH:fpm00670]
D LA56_1573 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LA56_1757 folD; bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D LA56_734 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LA56_1760 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D LA56_1522 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LA56_1032 formyl transferase family protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LA56_359 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LA56_1847 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LA56_726 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D LA56_105 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D LA56_717 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:fpm00860]
D LA56_1569 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LA56_1111 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D LA56_361 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LA56_30 delta-aminolevulinic acid dehydratase family protein K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LA56_1478 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D LA56_865 uroporphyrinogen-III synthase HemD family protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D LA56_1233 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D LA56_348 coproporphyrinogen III oxidase family protein K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D LA56_304 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D LA56_513 radical SAM additional 4Fe4S-binding SPASM domain protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:fpm00130]
D LA56_1725 chorismate lyase family protein K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D LA56_1724 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D LA56_714 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D LA56_1672 ubiG; 3-demethylubiquinone-9 3-O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D LA56_715 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D LA56_1795 ubiquinone/menaquinone biosynthesis methyltransferase family protein K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D LA56_542 ubiquinone biosynthesis COQ7 family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D LA56_1828 mtnN; MTA/SAH nucleosidase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D LA56_1534 wrbA; quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:fpm00900]
D LA56_453 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D LA56_997 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D LA56_99 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D LA56_1493 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D LA56_657 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D LA56_262 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D LA56_1701 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D LA56_986 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D LA56_476 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D LA56_1579 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:fpm00907]
D LA56_954 acetyl-CoA C-acyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D LA56_813 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:fpm00523]
D LA56_939 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LA56_936 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LA56_938 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LA56_937 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D LA56_936 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D LA56_265 beta-lactamase family protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D LA56_578 beta-lactamase family protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:fpm00332]
D LA56_1563 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D LA56_1564 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:fpm00261]
D LA56_1307 aspartate kinase domain protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LA56_1251 aspartate kinase domain protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LA56_5 aspartate kinase domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D LA56_4 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LA56_1305 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LA56_1306 dihydrodipicolinate reductase, family protein K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:fpm00521]
D LA56_1796 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LA56_94 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_369 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_93 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_1860 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LA56_826 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LA56_939 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LA56_936 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LA56_938 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LA56_937 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D LA56_1796 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LA56_94 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_369 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LA56_93 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:fpm00525]
D LA56_939 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LA56_936 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:fpm00401]
D LA56_1394 prephenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D LA56_282 cys/Met metabolism PLP-dependent enzyme family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1751 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1302 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_235 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D LA56_1362 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D LA56_382 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D LA56_1361 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D LA56_818 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LA56_1090 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LA56_819 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LA56_697 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D LA56_1095 phosphopantetheine attachment site family protein K02078 acpP; acyl carrier protein
D LA56_1096 phosphopantetheine attachment site family protein K02078 acpP; acyl carrier protein
D LA56_820 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:fpm00999]
D LA56_1131 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LA56_1417 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:fpm00362]
D LA56_954 acetyl-CoA C-acyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LA56_165 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D LA56_953 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:fpm00625]
D LA56_1750 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:fpm00633]
D LA56_1566 nitroreductase family protein K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
C 00642 Ethylbenzene degradation
D LA56_954 acetyl-CoA C-acyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:fpm00626]
D LA56_1750 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:fpm00984]
D LA56_250 short chain dehydrogenase family protein K05296 E1.1.1.51; 3(or 17)beta-hydroxysteroid dehydrogenase [EC:1.1.1.51]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:fpm03020]
D LA56_1136 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LA56_1135 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LA56_903 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LA56_1612 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LA56_89 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:fpm03010]
D LA56_1505 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D LA56_1575 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D LA56_1593 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LA56_1611 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LA56_1604 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LA56_487 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D LA56_1584 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LA56_1601 ribosomal S8 family protein K02994 RP-S8; small subunit ribosomal protein S8
D LA56_764 ribosomal S9/S16 family protein K02996 RP-S9; small subunit ribosomal protein S9
D LA56_1586 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D LA56_1610 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D LA56_1583 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D LA56_1609 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LA56_1600 ribosomal S14p/S29e family protein K02954 RP-S14; small subunit ribosomal protein S14
D LA56_84 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D LA56_1130 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LA56_1596 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D LA56_486 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D LA56_1591 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LA56_1448 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LA56_554 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LA56_1822 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LA56_470 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LA56_1139 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D LA56_1590 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LA56_1587 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D LA56_1588 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LA56_1599 ribosomal L5 family protein K02931 RP-L5; large subunit ribosomal protein L5
D LA56_1602 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D LA56_1137 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LA56_485 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LA56_1138 ribosomal L10 family protein K02864 RP-L10; large subunit ribosomal protein L10
D LA56_1140 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LA56_763 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LA56_1597 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D LA56_1606 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LA56_1594 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D LA56_1613 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D LA56_1603 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D LA56_1127 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D LA56_203 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LA56_167 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LA56_1592 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D LA56_1589 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LA56_1598 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D LA56_583 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D LA56_168 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D LA56_1684 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LA56_1595 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LA56_1605 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LA56_1633 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LA56_815 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LA56_1683 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LA56_1415 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D LA56_202 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D LA56_1608 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LA56_1805 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LA56_790 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LA56_1301 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LA56_1297 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LA56_1809 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LA56_786 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LA56_1810 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LA56_1296 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LA56_785 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LA56_1843 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:fpm00970]
D LA56_1299 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LA56_1807 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LA56_788 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LA56_1084 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LA56_1038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LA56_671 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LA56_867 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LA56_1364 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LA56_858 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D LA56_1494 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LA56_1570 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LA56_1146 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LA56_1039 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LA56_859 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LA56_670 tRNA-His K14226 tRNA-His; tRNA His
D LA56_1300 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LA56_1806 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LA56_789 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LA56_669 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LA56_857 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LA56_902 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LA56_1197 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LA56_141 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LA56_142 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LA56_989 tRNA-Met K14230 tRNA-Met; tRNA Met
D LA56_1232 tRNA-Met K14230 tRNA-Met; tRNA Met
D LA56_1638 tRNA-Met K14230 tRNA-Met; tRNA Met
D LA56_673 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LA56_672 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LA56_310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LA56_1720 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LA56_1803 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LA56_1365 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LA56_1145 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LA56_1143 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LA56_1147 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LA56_1804 tRNA-Val K14237 tRNA-Val; tRNA Val
D LA56_90 tRNA-Val K14237 tRNA-Val; tRNA Val
D LA56_353 tRNA-Val K14237 tRNA-Val; tRNA Val
D LA56_1569 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LA56_1263 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D LA56_1262 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D LA56_1264 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D LA56_16 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LA56_496 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LA56_1474 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LA56_1867 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LA56_322 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LA56_200 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LA56_138 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LA56_1661 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LA56_1802 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LA56_1032 formyl transferase family protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LA56_359 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LA56_1557 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LA56_425 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LA56_1781 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LA56_1514 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LA56_34 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LA56_870 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LA56_1227 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LA56_441 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LA56_440 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LA56_568 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LA56_1041 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:fpm03060]
D LA56_1607 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D LA56_1142 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D LA56_1198 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D LA56_642 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D LA56_641 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D LA56_643 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D LA56_1412 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LA56_164 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LA56_1052 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LA56_1464 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LA56_405 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LA56_1163 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LA56_981 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LA56_1779 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:fpm04122]
D LA56_723 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LA56_1463 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LA56_329 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D LA56_25 tusE; sulfur relay, TusE/DsrC/DsvC family protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D LA56_1450 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LA56_328 tRNA methyl transferase family protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:fpm03018]
D LA56_1118 NUDIX domain protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D LA56_724 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D LA56_97 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LA56_302 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LA56_85 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LA56_391 DEAD/DEAH box helicase family protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D LA56_978 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LA56_339 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LA56_712 DEAD/DEAH box helicase family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LA56_907 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D LA56_759 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D LA56_1081 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LA56_621 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D LA56_988 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:fpm03030]
D LA56_533 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LA56_1835 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LA56_1511 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LA56_28 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LA56_1519 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LA56_1556 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LA56_1368 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LA56_484 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LA56_468 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LA56_1467 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein
D LA56_636 RNase H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LA56_772 ribonuclease HII family protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LA56_1172 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LA56_830 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:fpm03410]
D LA56_605 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LA56_1002 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D LA56_79 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LA56_166 methyladenine glycosylase family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D LA56_397 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LA56_1172 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LA56_46 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LA56_830 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:fpm03420]
D LA56_609 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LA56_158 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D LA56_215 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D LA56_326 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D LA56_1162 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LA56_498 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LA56_1172 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LA56_830 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:fpm03430]
D LA56_1051 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D LA56_53 mutL; DNA mismatch repair MutL family protein K03572 mutL; DNA mismatch repair protein MutL
D LA56_1162 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LA56_498 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LA56_214 hypothetical protein K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D LA56_227 OB-fold nucleic acid binding domain protein K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LA56_229 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LA56_46 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LA56_1467 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein
D LA56_1835 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LA56_1368 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LA56_1511 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LA56_1519 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LA56_28 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LA56_533 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LA56_1556 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LA56_830 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:fpm03440]
D LA56_46 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LA56_1467 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein
D LA56_320 recF; DNA replication and repair RecF family protein K03629 recF; DNA replication and repair protein RecF
D LA56_721 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D LA56_194 recR; recombination protein RecR K06187 recR; recombination protein RecR
D LA56_1465 recA; protein RecA K03553 recA; recombination protein RecA
D LA56_1172 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LA56_594 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D LA56_450 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LA56_596 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D LA56_1686 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LA56_837 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D LA56_843 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D LA56_836 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D LA56_1835 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LA56_1368 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LA56_1511 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LA56_1519 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LA56_28 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LA56_533 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LA56_1556 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LA56_1537 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:fpm02010]
D LA56_49 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein
D LA56_170 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein
D LA56_171 binding--dependent transport system inner membrane component family protein K11075 potH; putrescine transport system permease protein
D LA56_172 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D LA56_1676 toluene tolerance, Ttg2 family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D LA56_745 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LA56_1677 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LA56_743 ABC transport permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LA56_1678 ABC transport permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LA56_1675 STAS domain protein K07122 mlaB; phospholipid transport system transporter-binding protein
D LA56_744 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LA56_1679 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LA56_653 metQ; D-methionine-binding lipometQ domain protein K02072 metI; D-methionine transport system permease protein
D LA56_652 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D LA56_1160 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D LA56_1159 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D LA56_1025 chain length determinant family protein K10107 kpsE; capsular polysaccharide transport system permease protein
D LA56_1023 ABC-2 type transporter family protein K09688 kpsM; capsular polysaccharide transport system permease protein
D LA56_1024 ABC transporter family protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D LA56_914 ABC transporter family protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D LA56_1844 liporeleasing system, transmembrane, LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D LA56_1845 lolD; liporeleasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D LA56_151 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D LA56_150 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D LA56_458 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D LA56_1174 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D LA56_131 cydC; thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D LA56_132 cydD; thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D LA56_1283 ABC transporter family protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS)
D LA56_774 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:fpm03070]
D LA56_1278 outer membrane efflux family protein K12340 tolC; outer membrane protein
D LA56_642 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D LA56_641 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D LA56_1142 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D LA56_1198 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D LA56_1607 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D LA56_643 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D LA56_1412 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LA56_164 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LA56_1163 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LA56_1052 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LA56_1464 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LA56_405 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:fpm02020]
D LA56_713 PAP2 superfamily protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D LA56_1184 his Kinase A domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LA56_982 hypothetical protein K07666 qseB; two-component system, OmpR family, response regulator QseB
D LA56_1290 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D LA56_1288 hypothetical protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LA56_1293 kdpA; K+-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D LA56_1292 kdpB; K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D LA56_1291 K+-transporting ATPase, c chain family protein K01548 kdpC; potassium-transporting ATPase KdpC subunit
D LA56_1367 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LA56_532 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LA56_1783 malic enzyme, NAD binding domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LA56_1295 uhpT; hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D LA56_1518 gLN1; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LA56_122 dicarboxylate symporter family protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D LA56_1755 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_428 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_551 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_317 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_1754 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_1517 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D LA56_1541 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LA56_1185 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LA56_1540 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LA56_1186 cytochrome oxidase subunit II family protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LA56_1278 outer membrane efflux family protein K12340 tolC; outer membrane protein
D LA56_616 yfkJ; low molecular weight protein-tyrosine-phosphatase yfkJ K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D LA56_1021 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D LA56_1020 nucleotide sugar dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D LA56_959 arginase family protein K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:fpm02024]
D LA56_621 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D LA56_1362 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D LA56_382 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D LA56_1361 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D LA56_404 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LA56_1184 his Kinase A domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LA56_982 hypothetical protein K07666 qseB; two-component system, OmpR family, response regulator QseB
D LA56_1288 hypothetical protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LA56_1276 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LA56_1080 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D LA56_1070 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D LA56_410 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D LA56_48 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D LA56_1666 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D LA56_750 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LA56_951 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LA56_437 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D LA56_1456 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D LA56_754 outer membrane efflux family protein K18139 oprM; outer membrane protein, multidrug efflux system
D LA56_1160 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D LA56_1159 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D LA56_1412 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LA56_1078 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-]
D LA56_1142 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D LA56_1198 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D LA56_1607 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D LA56_643 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D LA56_164 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LA56_1163 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LA56_1052 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LA56_1464 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LA56_405 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D LA56_467 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D LA56_97 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LA56_302 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:fpm01501]
D LA56_1209 major Facilitator Superfamily protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LA56_365 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LA56_1160 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D LA56_1159 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D LA56_265 beta-lactamase family protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D LA56_578 beta-lactamase family protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D LA56_1177 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LA56_1178 acrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D LA56_754 outer membrane efflux family protein K18139 oprM; outer membrane protein, multidrug efflux system
D LA56_1278 outer membrane efflux family protein K12340 tolC; outer membrane protein
D LA56_83 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:fpm01502]
D LA56_1507 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LA56_179 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LA56_1665 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LA56_2 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LA56_18 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LA56_196 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LA56_532 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:fpm01503]
D LA56_1429 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D LA56_1177 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LA56_1178 acrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D LA56_1278 outer membrane efflux family protein K12340 tolC; outer membrane protein
D LA56_992 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:fpm01000]
C 01001 Protein kinases [BR:fpm01001]
D LA56_1184 his Kinase A domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LA56_1290 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:fpm01009]
D LA56_1615 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
D LA56_175 HAD phosphoserine phosphatase-like hydrolase, IB family protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:fpm01002]
D LA56_1779 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D LA56_576 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LA56_1345 hydrogenase maturation protease family protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D LA56_1553 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D LA56_454 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LA56_1275 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D LA56_258 glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LA56_1820 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LA56_512 linear amide C-N hydrolase, choloylglycine hydrolase family protein K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
D LA56_1851 CAAX protease self-immunity family protein K07052 K07052; CAAX protease family protein
D LA56_1356 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D LA56_1764 peptidase M3 family protein K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D LA56_532 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LA56_149 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D LA56_148 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D LA56_152 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LA56_494 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LA56_1825 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D LA56_264 hypothetical protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D LA56_1315 carboxypeptidase Taq (M32) metallopeptidase family protein K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D LA56_160 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LA56_1729 peptidase M48 family protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D LA56_1078 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-]
D LA56_463 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LA56_113 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LA56_471 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LA56_627 clpP; ATP-dependent Clp endopeptidase, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D LA56_625 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D LA56_981 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LA56_1308 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LA56_1461 peptidase S49 family protein K04773 sppA; protease IV [EC:3.4.21.-]
D LA56_27 hypothetical protein K04774 sohB; serine protease SohB [EC:3.4.21.-]
D LA56_675 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D LA56_571 hslV; ATP-dependent protease HslVU, peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D LA56_674 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D LA56_249 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LA56_1281 peptidase U32 family protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D LA56_617 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC
D LA56_618 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:fpm01003]
D LA56_1862 glgA; glycogen/starch synthase, ADP-glucose type family protein K00703 glgA; starch synthase [EC:2.4.1.21]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:fpm01005]
D LA56_992 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D LA56_991 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D LA56_1512 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D LA56_994 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LA56_1542 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LA56_1647 PAP2 superfamily protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-]
D LA56_8 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D LA56_1173 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D LA56_1411 bacterial lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LA56_1410 bacterial lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LA56_985 glycosyl transferases group 1 family protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D LA56_1429 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D LA56_87 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D LA56_331 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D LA56_461 hydrolase, HAD super, subfamily III A K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D LA56_691 sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D LA56_729 glycosyl transferases group 1 family protein K12989 lpcC; mannosyltransferase [EC:2.4.1.-]
D LA56_1445 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D LA56_893 glycosyl transferase 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D LA56_22 glycosyl transferase 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D LA56_945 bacterial sugar transferase family protein K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:fpm01011]
D LA56_1787 EPSP synthase family protein K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LA56_1788 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LA56_1418 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LA56_19 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LA56_1507 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LA56_179 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LA56_1665 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LA56_217 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D LA56_18 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LA56_196 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LA56_1631 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D LA56_83 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LA56_463 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LA56_113 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LA56_471 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LA56_532 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LA56_1829 transglycosylase SLT domain protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D LA56_1830 transglycosylase SLT domain protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D LA56_761 mltA specific insert domain protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D LA56_1117 N-acetylmuramoyl-L-alanine amidase family protein K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:fpm01004]
D LA56_818 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LA56_817 fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LA56_1092 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D LA56_1089 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LA56_821 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LA56_1090 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LA56_819 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LA56_993 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LA56_1099 fabA-like domain protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LA56_697 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LA56_1132 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LA56_977 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LA56_314 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LA56_750 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LA56_951 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LA56_816 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D LA56_651 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LA56_1326 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LA56_1327 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:fpm01006]
D LA56_986 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D LA56_476 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D LA56_1579 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LA56_622 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LA56_1724 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:fpm01007]
D LA56_1569 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LA56_16 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LA56_568 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LA56_1041 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LA56_1661 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LA56_34 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LA56_1802 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LA56_1781 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LA56_1557 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LA56_425 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LA56_1514 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LA56_1474 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LA56_1227 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LA56_1867 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LA56_322 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LA56_138 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LA56_870 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LA56_200 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LA56_496 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LA56_441 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LA56_440 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LA56_282 cys/Met metabolism PLP-dependent enzyme family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1751 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_1302 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LA56_872 aminotransferase class-V family protein K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D LA56_235 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LA56_102 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D LA56_373 aminotransferase class I and II family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LA56_1034 aminotransferase class I and II family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LA56_1621 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D LA56_1252 2,4-diaminobutyrate 4-transaminase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D LA56_375 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D LA56_361 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LA56_1405 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LA56_381 pabB; aminodeoxychorismate synthase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D LA56_347 aminotransferase class-V family protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LA56_932 wecE; TDP-4-keto-6-deoxy-D-glucose transaminase family protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:fpm00194]
D LA56_1214 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LA56_1215 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LA56_1216 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LA56_1217 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LA56_1218 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LA56_1219 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LA56_1220 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LA56_1221 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:fpm03000]
D LA56_649 bacterial regulatory helix-turn-helix, lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D LA56_526 bacterial regulatory helix-turn-helix, lysR family protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D LA56_768 marR family protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D LA56_1250 ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D LA56_437 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D LA56_559 iclR helix-turn-helix domain protein K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D LA56_363 transcriptional regulator family protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D LA56_357 bacterial regulatory, arsR family protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D LA56_1734 bacterial regulatory, arsR family protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D LA56_885 bacterial regulatory, arsR family protein K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D LA56_45 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D LA56_371 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D LA56_1363 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D LA56_1718 sensory box protein K21829 dauR; D-arginine utilization repressor
D LA56_448 helix-turn-helix family protein K07727 K07727; putative transcriptional regulator
D LA56_297 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LA56_718 bolA-like family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D LA56_1773 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LA56_1620 hypothetical protein K03402 argR; transcriptional regulator of arginine metabolism
D LA56_423 hypothetical protein K07735 algH; putative transcriptional regulator
C 03021 Transcription machinery [BR:fpm03021]
D LA56_903 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LA56_1612 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LA56_1136 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LA56_1135 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LA56_89 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LA56_467 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D LA56_639 rpoH; alternative sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D LA56_1230 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D LA56_874 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D LA56_1141 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D LA56_765 hypothetical protein K03599 sspA; stringent starvation protein A
D LA56_26 hypothetical protein K03599 sspA; stringent starvation protein A
D LA56_766 stringent starvation B family protein K03600 sspB; stringent starvation protein B
D LA56_157 greA; transcription elongation factor greA K03624 greA; transcription elongation factor GreA
D LA56_907 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:fpm03019]
D LA56_724 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D LA56_1366 ribonuclease, Rne/Rng family domain protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D LA56_980 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LA56_978 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LA56_1407 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D LA56_391 DEAD/DEAH box helicase family protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D LA56_339 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LA56_712 DEAD/DEAH box helicase family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LA56_97 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LA56_302 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LA56_85 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LA56_907 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D LA56_759 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D LA56_1081 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LA56_621 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D LA56_988 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D LA56_1118 NUDIX domain protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D LA56_947 hrpA; RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:fpm03011]
D LA56_1505 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D LA56_1575 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D LA56_1593 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LA56_1611 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LA56_1604 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LA56_487 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D LA56_1584 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LA56_1601 ribosomal S8 family protein K02994 RP-S8; small subunit ribosomal protein S8
D LA56_764 ribosomal S9/S16 family protein K02996 RP-S9; small subunit ribosomal protein S9
D LA56_1586 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D LA56_1610 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D LA56_1583 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D LA56_1609 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LA56_1600 ribosomal S14p/S29e family protein K02954 RP-S14; small subunit ribosomal protein S14
D LA56_84 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D LA56_1130 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LA56_1596 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D LA56_486 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D LA56_1591 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LA56_1448 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LA56_554 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LA56_1822 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LA56_470 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LA56_1139 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D LA56_1590 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LA56_1587 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D LA56_1588 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LA56_1599 ribosomal L5 family protein K02931 RP-L5; large subunit ribosomal protein L5
D LA56_1602 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D LA56_485 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LA56_1138 ribosomal L10 family protein K02864 RP-L10; large subunit ribosomal protein L10
D LA56_1140 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LA56_1137 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LA56_763 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LA56_1597 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D LA56_1606 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LA56_1594 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D LA56_1613 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D LA56_1603 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D LA56_1127 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D LA56_203 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LA56_167 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LA56_1592 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D LA56_1589 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LA56_1598 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D LA56_168 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D LA56_1684 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LA56_1595 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LA56_1605 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LA56_1633 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LA56_815 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LA56_1683 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LA56_1415 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D LA56_202 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D LA56_1608 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LA56_583 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D LA56_1810 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LA56_1296 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LA56_785 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LA56_1843 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LA56_1805 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LA56_790 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LA56_1301 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LA56_1297 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LA56_1809 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LA56_786 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:fpm03009]
D LA56_980 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LA56_1407 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D LA56_283 era; GTP-binding protein Era K03595 era; GTPase
D LA56_1286 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D LA56_1230 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D LA56_874 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D LA56_1141 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D LA56_37 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D LA56_828 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D LA56_147 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D LA56_748 RNA methyltransferase, RsmE family protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D LA56_1439 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LA56_81 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D LA56_1419 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D LA56_1055 SAM-dependent methyltransferase family protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D LA56_11 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D LA56_1778 ftsJ-like methyltransferase family protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D LA56_1109 rlmH; rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D LA56_354 THUMP domain protein K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D LA56_483 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D LA56_92 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D LA56_481 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D LA56_1224 pseudouridine synthase, RluA family protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D LA56_741 pseudouridine synthase, RluA family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D LA56_1499 acetyltransferase domain protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D LA56_479 acetyltransferase domain protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D LA56_1129 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D LA56_1711 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D LA56_307 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D LA56_1662 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D LA56_724 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D LA56_1366 ribonuclease, Rne/Rng family domain protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D LA56_424 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D LA56_339 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LA56_712 DEAD/DEAH box helicase family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LA56_50 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LA56_1786 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
D LA56_278 ylqF; ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D LA56_620 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D LA56_1504 telomere recombination family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LA56_664 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LA56_1228 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D LA56_1231 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D LA56_500 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D LA56_272 putative rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor
D LA56_29 CRS1 / YhbY domain protein K07574 yhbY; RNA-binding protein
D LA56_733 hypothetical protein K09889 yjgA; ribosome-associated protein
D LA56_775 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D LA56_580 engD; GTP-dependent nucleic acid-binding protein engD K06942 ychF; ribosome-binding ATPase
D LA56_814 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:fpm03016]
D LA56_241 ribonuclease T2 family protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D LA56_1175 poly A polymerase head domain protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D LA56_1569 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LA56_870 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LA56_1781 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LA56_425 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LA56_1802 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LA56_16 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LA56_34 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LA56_1514 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LA56_1474 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LA56_496 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LA56_200 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LA56_138 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LA56_1661 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LA56_1557 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LA56_1227 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LA56_441 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LA56_440 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LA56_568 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LA56_1041 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LA56_1396 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D LA56_1792 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LA56_890 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D LA56_455 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D LA56_979 truB; tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D LA56_723 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LA56_1504 telomere recombination family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LA56_622 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LA56_777 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D LA56_209 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LA56_1414 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D LA56_1726 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D LA56_1476 RNB domain protein K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D LA56_325 HRDC domain protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D LA56_1347 ccmA; heme ABC exporter, ATP-binding protein CcmA K06020 ettA; energy-dependent translational throttle protein EttA
D LA56_1867 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LA56_322 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LA56_1506 cytidine and deoxycytidylate deaminase zinc-binding region family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D LA56_74 dusA; tRNA dihydrouridine synthase A family protein K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D LA56_308 TIM-barrel, nifR3 family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D LA56_274 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D LA56_773 trmJ; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D LA56_1128 trmD; tRNA (guanine(37)-N(1))-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D LA56_31 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D LA56_508 RNA 2'-O ribose methyltransferase substrate binding family protein K03437 spoU; RNA methyltransferase, TrmH family
D LA56_1450 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LA56_328 tRNA methyl transferase family protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LA56_242 PP-loop family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D LA56_474 PP-loop family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D LA56_329 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D LA56_25 tusE; sulfur relay, TusE/DsrC/DsvC family protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D LA56_186 iron-sulfur cluster assembly accessory family protein K13628 iscA; iron-sulfur cluster assembly protein
D LA56_491 aminomethyltransferase folate-binding domain protein K06980 ygfZ; tRNA-modifying protein YgfZ
D LA56_145 tRNA-family protein K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D LA56_247 mnmC; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D LA56_711 queA; tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D LA56_501 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D LA56_650 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D LA56_728 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D LA56_280 yeaZ; tRNA threonylcarbamoyl adenosine modification protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D LA56_1133 tsaD; tRNA threonylcarbamoyl adenosine modification protein TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D LA56_1629 tRNA threonylcarbamoyl adenosine modification protein YjeE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D LA56_541 thiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D LA56_978 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LA56_85 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:fpm03012]
D LA56_1229 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LA56_201 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D LA56_549 ABC transporter family protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D LA56_1576 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D LA56_1144 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D LA56_1585 fusA; translation elongation factor G K02355 fusA; elongation factor G
D LA56_1110 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D LA56_1578 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D LA56_1108 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D LA56_579 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D LA56_408 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D LA56_1408 efp; translation elongation factor P K02356 efp; elongation factor P
D LA56_44 EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D LA56_558 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D LA56_1513 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D LA56_1165 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:fpm03110]
D LA56_1319 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D LA56_626 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D LA56_572 hslU; ATP-dependent protease HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D LA56_1615 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
D LA56_759 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D LA56_1081 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LA56_758 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D LA56_1062 dnaJ domain protein K05516 cbpA; curved DNA-binding protein
D LA56_760 grpE family protein K03687 GRPE; molecular chaperone GrpE
D LA56_564 hslR; heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D LA56_1082 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D LA56_160 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LA56_1221 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LA56_1052 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LA56_1464 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LA56_1001 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D LA56_1333 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D LA56_1334 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D LA56_1078 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-]
D LA56_260 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D LA56_623 PPIC-type PPIASE domain protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D LA56_475 domain amino terminal to FKBP-type peptidyl-prolyl isomerase family protein K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D LA56_1700 FKBP-type peptidyl-prolyl cis-trans isomerase family protein K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D LA56_338 PPIC-type PPIASE domain protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D LA56_36 PPIC-type PPIASE domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D LA56_906 trxA; thioredoxin K03671 TXN; thioredoxin
D LA56_417 trxA; thioredoxin K03671 TXN; thioredoxin
D LA56_547 grxA; glutaredoxin 1 K03674 grxA; glutaredoxin 1
D LA56_603 hypothetical protein K03675 grxB; glutaredoxin 2
D LA56_548 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LA56_511 glutaredoxin family protein K03676 grxC; glutaredoxin 3
D LA56_1212 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D LA56_1176 disulfide bond formation DsbB family protein K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D LA56_577 hypothetical protein K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:fpm04131]
D LA56_1626 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LA56_812 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LA56_810 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LA56_1615 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:fpm03051]
D LA56_1615 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:fpm03032]
D LA56_636 RNase H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LA56_624 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D LA56_1367 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LA56_484 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LA56_468 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LA56_1467 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein
D LA56_1835 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LA56_1368 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LA56_1556 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LA56_1519 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LA56_28 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LA56_533 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LA56_1511 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LA56_772 ribonuclease HII family protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LA56_1172 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LA56_830 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LA56_998 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LA56_76 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LA56_1827 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LA56_1115 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LA56_1771 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:fpm03036]
D LA56_980 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LA56_624 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D LA56_1062 dnaJ domain protein K05516 cbpA; curved DNA-binding protein
D LA56_1367 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LA56_621 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D LA56_1509 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D LA56_98 septum formation initiator family protein K05589 ftsB; cell division protein FtsB
D LA56_83 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LA56_1646 ftsK; DNA translocase ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LA56_82 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D LA56_1508 cell division FtsQ family protein K03589 ftsQ; cell division protein FtsQ
D LA56_20 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D LA56_1510 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LA56_1225 AFG1-like ATPase family protein K06916 zapE; cell division protein ZapE
D LA56_1177 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LA56_1682 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D LA56_1681 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D LA56_1680 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D LA56_1772 SRP54-type, GTPase domain protein K03496 parA; chromosome partitioning protein
D LA56_1773 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LA56_1827 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LA56_1115 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LA56_209 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LA56_1439 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LA56_1054 phage integrase family protein K03733 xerC; integrase/recombinase XerC
D LA56_1126 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D LA56_430 4Fe-4S iron sulfur cluster binding s, NifH/frxC family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LA56_615 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:fpm03400]
D LA56_1069 methylated-DNA--[]-cysteine S-methyltransferase family protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D LA56_303 FAD binding domain of DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D LA56_1714 FAD binding domain of DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D LA56_1002 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D LA56_605 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LA56_422 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D LA56_1691 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D LA56_1581 dut; dUTP diphosphatase family protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LA56_1715 FAD binding domain of DNA photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D LA56_166 methyladenine glycosylase family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D LA56_79 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LA56_397 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LA56_46 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LA56_830 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LA56_1172 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LA56_158 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D LA56_215 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D LA56_326 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D LA56_1162 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LA56_498 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LA56_1136 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LA56_1135 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LA56_903 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LA56_1612 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LA56_89 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LA56_609 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LA56_1051 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D LA56_53 mutL; DNA mismatch repair MutL family protein K03572 mutL; DNA mismatch repair protein MutL
D LA56_214 hypothetical protein K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D LA56_227 OB-fold nucleic acid binding domain protein K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LA56_229 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LA56_1835 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LA56_1368 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LA56_1556 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LA56_1519 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LA56_28 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LA56_533 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LA56_1511 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LA56_1467 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein
D LA56_837 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D LA56_843 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D LA56_836 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D LA56_1465 recA; protein RecA K03553 recA; recombination protein RecA
D LA56_594 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D LA56_450 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LA56_596 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D LA56_1537 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D LA56_1739 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D LA56_320 recF; DNA replication and repair RecF family protein K03629 recF; DNA replication and repair protein RecF
D LA56_1686 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LA56_721 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D LA56_194 recR; recombination protein RecR K06187 recR; recombination protein RecR
D LA56_1752 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D LA56_351 exonuclease, RdgC family protein K03554 rdgC; recombination associated protein RdgC
D LA56_998 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LA56_76 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LA56_1771 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D LA56_624 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D LA56_553 hypothetical protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D LA56_1466 recX family protein K03565 recX; regulatory protein
D LA56_490 hypothetical protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D LA56_546 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LA56_548 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:fpm03029]
D LA56_1229 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LA56_201 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D LA56_1576 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D LA56_1144 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D LA56_1585 fusA; translation elongation factor G K02355 fusA; elongation factor G
D LA56_283 era; GTP-binding protein Era K03595 era; GTPase
D LA56_568 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LA56_425 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LA56_1474 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LA56_34 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LA56_1263 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D LA56_1262 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D LA56_1264 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D LA56_266 DNA/RNA non-specific endonuclease family protein K01173 ENDOG; endonuclease G, mitochondrial
D LA56_1467 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein
D LA56_996 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D LA56_759 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D LA56_760 grpE family protein K03687 GRPE; molecular chaperone GrpE
D LA56_1081 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LA56_1082 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D LA56_758 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D LA56_882 metallo-beta-lactamase superfamily protein K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
D LA56_723 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LA56_1212 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D LA56_430 4Fe-4S iron sulfur cluster binding s, NifH/frxC family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LA56_1412 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LA56_1615 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:fpm02000]
D LA56_1174 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D LA56_131 cydC; thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D LA56_132 cydD; thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D LA56_1283 ABC transporter family protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D LA56_14 ccmA; heme ABC exporter, ATP-binding protein CcmA K15738 uup; ABC transport system ATP-binding/permease protein
D LA56_49 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein
D LA56_170 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein
D LA56_171 binding--dependent transport system inner membrane component family protein K11075 potH; putrescine transport system permease protein
D LA56_172 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D LA56_1484 binding--dependent transport system inner membrane component family protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D LA56_1498 binding--dependent transport system inner membrane component family protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D LA56_1485 ABC transporter family protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D LA56_745 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LA56_1677 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LA56_743 ABC transport permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LA56_1678 ABC transport permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LA56_744 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LA56_1679 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LA56_1676 toluene tolerance, Ttg2 family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D LA56_1675 STAS domain protein K07122 mlaB; phospholipid transport system transporter-binding protein
D LA56_653 metQ; D-methionine-binding lipometQ domain protein K02072 metI; D-methionine transport system permease protein
D LA56_652 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D LA56_1160 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D LA56_1159 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D LA56_1531 periplasmic solute binding family protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D LA56_1529 ABC 3 transport family protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D LA56_1530 ABC transporter family protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D LA56_1023 ABC-2 type transporter family protein K09688 kpsM; capsular polysaccharide transport system permease protein
D LA56_1025 chain length determinant family protein K10107 kpsE; capsular polysaccharide transport system permease protein
D LA56_1024 ABC transporter family protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D LA56_914 ABC transporter family protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D LA56_151 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D LA56_150 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D LA56_458 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D LA56_1844 liporeleasing system, transmembrane, LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D LA56_1845 lolD; liporeleasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D LA56_894 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LA56_118 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LA56_117 ABC transporter family protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LA56_895 ABC transporter family protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LA56_414 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D LA56_435 ZIP Zinc transporter family protein K14709 SLC39A1_2_3; solute carrier family 39 (zinc transporter), member 1/2/3
D LA56_107 matE family protein K26937 dinF; MATE family, multidrug efflux pump
D LA56_336 MFS transporter, sugar porter family protein K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D LA56_337 MFS transporter, sugar porter family protein K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D LA56_1425 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LA56_668 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LA56_231 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LA56_110 major Facilitator Superfamily protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LA56_218 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LA56_219 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LA56_1332 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LA56_1295 uhpT; hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D LA56_114 major Facilitator Superfamily protein K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D LA56_1209 major Facilitator Superfamily protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LA56_1282 drug resistance transporter, Bcr/CflA subfamily protein K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D LA56_1663 sugar (and other) transporter family protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LA56_1443 sugar (and other) transporter family protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LA56_1074 sugar (and other) transporter family protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LA56_323 drug resistance transporter, Bcr/CflA subfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LA56_504 drug resistance transporter, Bcr/CflA subfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LA56_1831 major Facilitator Superfamily protein K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D LA56_60 sugar (and other) transporter family protein K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein
D LA56_752 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D LA56_56 major Facilitator Superfamily protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D LA56_1472 major Facilitator Superfamily protein K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D LA56_824 major Facilitator Superfamily protein K06141 tsgA; MFS transporter, TsgA protein
D LA56_1397 major Facilitator Superfamily protein K06141 tsgA; MFS transporter, TsgA protein
D LA56_774 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D LA56_1152 MIP channel s family protein K02440 glpF; glycerol uptake facilitator
D LA56_1614 ion transport family protein K10716 kch; voltage-gated potassium channel
D LA56_574 trkA-N domain protein K10716 kch; voltage-gated potassium channel
D LA56_765 hypothetical protein K03599 sspA; stringent starvation protein A
D LA56_26 hypothetical protein K03599 sspA; stringent starvation protein A
D LA56_1549 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D LA56_1550 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D LA56_1551 tetratricopeptide repeat family protein K07114 yfbK; Ca-activated chloride channel homolog
D LA56_608 inhibitor of apoptosis-promoting Bax1 family protein K19416 yccA; modulator of FtsH protease
D LA56_1150 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D LA56_1834 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein
D LA56_43 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein
D LA56_1832 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein
D LA56_427 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D LA56_1705 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D LA56_1706 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D LA56_530 corA-like Mg2+ transporter family protein K16074 zntB; zinc transporter
D LA56_1479 crcB-like family protein K06199 crcB; fluoride exporter
D LA56_582 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LA56_1653 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LA56_190 ompA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D LA56_1278 outer membrane efflux family protein K12340 tolC; outer membrane protein
D LA56_754 outer membrane efflux family protein K18139 oprM; outer membrane protein, multidrug efflux system
D LA56_996 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D LA56_1113 yfgL; outer membrane assembly lipoprotein YfgL K17713 bamB; outer membrane protein assembly factor BamB
D LA56_740 yfiO; outer membrane assembly lipoYfiO family protein K05807 bamD; outer membrane protein assembly factor BamD
D LA56_1446 smpA / OmlA family protein K06186 bamE; outer membrane protein assembly factor BamE
D LA56_460 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D LA56_35 organic solvent tolerance family protein K04744 lptD; LPS-assembly protein
D LA56_426 lipopolysaccharide-assembly family protein K03643 lptE; LPS-assembly lipoprotein
D LA56_271 CBS domain protein K06189 corC; hemolysin (HlyC) family protein
D LA56_1648 amino acid permease family protein K11733 lysP; lysine-specific permease
D LA56_1080 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D LA56_1070 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D LA56_410 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D LA56_48 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D LA56_1666 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D LA56_1178 acrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D LA56_355 small Multidrug Resistance family protein K03297 emrE; small multidrug resistance pump
D LA56_1354 sugar transport family protein K05340 glcU; glucose uptake protein
D LA56_506 transporter, betaine/carnitine/choline transporter family protein K02168 betT; choline/glycine/proline betaine transport protein
D LA56_1651 putP; sodium/proline symporter K11928 putP; sodium/proline symporter
D LA56_122 dicarboxylate symporter family protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D LA56_1329 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D LA56_1044 sodium/hydrogen exchanger family protein K03316 nhaP; Na+:H+ antiporter
D LA56_1457 sodium/hydrogen exchanger family protein K03316 nhaP; Na+:H+ antiporter
D LA56_1458 sodium/hydrogen exchanger family protein K03316 nhaP; Na+:H+ antiporter
D LA56_588 sodium/hydrogen exchanger family protein K26735 KEA4_5_6; K+:H+ antiporter
D LA56_1641 cation transport family protein K03498 trkH; trk/ktr system potassium uptake protein
D LA56_411 trkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D LA56_1695 permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D LA56_1167 na+ dependent nucleoside transporter family protein K11535 nupC; nucleoside transport protein
D LA56_1168 na+ dependent nucleoside transporter family protein K11535 nupC; nucleoside transport protein
D LA56_1061 tryptophan/tyrosine permease family protein K03834 tyrP; tyrosine-specific transport protein
D LA56_1437 tryptophan/tyrosine permease family protein K03834 tyrP; tyrosine-specific transport protein
D LA56_1840 tryptophan/tyrosine permease family protein K03834 tyrP; tyrosine-specific transport protein
D LA56_1053 tryptophan/tyrosine permease family protein K03834 tyrP; tyrosine-specific transport protein
D LA56_1376 tryptophan/tyrosine permease family protein K03837 sdaC; serine transporter
D LA56_100 tryptophan/tyrosine permease family protein K03837 sdaC; serine transporter
D LA56_1314 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D LA56_1344 high-affinity nickel-transport family protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D LA56_119 sulfate transporter family protein K03321 TC.SULP; sulfate permease, SulP family
D LA56_356 arsB; arsenical-resistance protein K03325 ACR3; arsenite transporter
D LA56_1631 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D LA56_892 lysE type translocator family protein K05835 rhtC; threonine efflux protein
D LA56_47 hypothetical protein K03548 perM; putative permease
D LA56_703 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D LA56_20 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D LA56_1710 pal; outer membrane P6 domain protein K03640 pal; peptidoglycan-associated lipoprotein
D LA56_1707 tolA; protein TolA K03646 tolA; colicin import membrane protein
D LA56_1708 tolB amino-terminal domain protein K03641 tolB; TolB protein
D LA56_753 efflux transporter, RND family, MFP subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D LA56_1177 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LA56_95 pnuC; nicotinamide mononucleotide transporter PnuC family protein K03811 pnuC; nicotinamide mononucleotide transporter
D LA56_1310 pnuC; nicotinamide mononucleotide transporter PnuC family protein K03811 pnuC; nicotinamide mononucleotide transporter
D LA56_1317 pnuC; nicotinamide mononucleotide transporter PnuC family protein K03811 pnuC; nicotinamide mononucleotide transporter
D LA56_1536 pnuC; nicotinamide mononucleotide transporter PnuC family protein K03811 pnuC; nicotinamide mononucleotide transporter
D LA56_1085 feoA domain protein K04758 feoA; ferrous iron transport protein A
D LA56_1086 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D LA56_507 tspO/MBR family protein K05770 TSPO; translocator protein
D LA56_839 HIUase/Transthyretin family protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:fpm02044]
D LA56_1278 outer membrane efflux family protein K12340 tolC; outer membrane protein
D LA56_576 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LA56_1755 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_428 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_551 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_317 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_1754 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_193 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D LA56_192 type II secretion system (T2SS), F family protein K02653 pilC; type IV pilus assembly protein PilC
D LA56_1409 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D LA56_482 tetratricopeptide repeat family protein K02656 pilF; type IV pilus assembly protein PilF
D LA56_290 pilus assembly, PilP family protein K02665 pilP; type IV pilus assembly protein PilP
D LA56_291 pilQ; type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D LA56_1189 twitching motility family protein K02669 pilT; twitching motility protein PilT
D LA56_1659 putative pilus assembly protein K02672 pilW; type IV pilus assembly protein PilW
D LA56_156 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D LA56_1497 YGGT family protein K02221 yggT; YggT family protein
D LA56_1501 hypothetical protein K02238 comEC; competence protein ComEC
D LA56_1791 phosphoribosyl transferase domain protein K02242 comFC; competence protein ComFC
D LA56_803 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D LA56_804 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D LA56_164 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LA56_1052 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LA56_1464 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LA56_642 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D LA56_1142 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D LA56_641 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D LA56_1198 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D LA56_1607 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D LA56_405 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LA56_1163 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LA56_643 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D LA56_1412 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:fpm02042]
D LA56_582 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LA56_1653 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:fpm02022]
D LA56_1184 his Kinase A domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LA56_982 hypothetical protein K07666 qseB; two-component system, OmpR family, response regulator QseB
D LA56_1290 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D LA56_1288 hypothetical protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LA56_969 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator
C 02035 Bacterial motility proteins [BR:fpm02035]
D LA56_1189 twitching motility family protein K02669 pilT; twitching motility protein PilT
D LA56_1755 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_428 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_551 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_317 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_1754 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D LA56_193 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D LA56_192 type II secretion system (T2SS), F family protein K02653 pilC; type IV pilus assembly protein PilC
D LA56_576 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LA56_482 tetratricopeptide repeat family protein K02656 pilF; type IV pilus assembly protein PilF
D LA56_291 pilQ; type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D LA56_290 pilus assembly, PilP family protein K02665 pilP; type IV pilus assembly protein PilP
D LA56_1659 putative pilus assembly protein K02672 pilW; type IV pilus assembly protein PilW
D LA56_1409 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:fpm04812]
D LA56_1510 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LA56_1509 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D LA56_1682 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D LA56_1681 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D LA56_1680 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D LA56_1772 SRP54-type, GTPase domain protein K03496 parA; chromosome partitioning protein
D LA56_1773 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:fpm04147]
D LA56_1615 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
D LA56_97 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LA56_302 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LA56_812 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LA56_811 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LA56_810 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LA56_538 hypothetical protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D LA56_488 redoxin family protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D LA56_1081 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LA56_759 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D LA56_155 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LA56_153 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LA56_1144 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D LA56_1792 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LA56_750 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LA56_951 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LA56_286 adenylate kinase family protein K00939 adk; adenylate kinase [EC:2.7.4.3]
D LA56_1201 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D LA56_1622 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LA56_1623 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LA56_334 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D LA56_1859 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D LA56_1155 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D LA56_1518 gLN1; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LA56_30 delta-aminolevulinic acid dehydratase family protein K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LA56_727 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LA56_1522 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LA56_1003 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LA56_1199 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LA56_1520 lipocalin-like domain protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:fpm02048]
D LA56_130 hsdR; type I site-specific deoxyribonuclease, HsdR family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D LA56_633 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D LA56_125 type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D LA56_632 type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D LA56_123 N-6 DNA Methylase family protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D LA56_629 eco57I restriction-modification methylase family protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D LA56_1838 AAA domain family protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D LA56_1839 mcrBC 5-methylcytosine restriction system component family protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D LA56_1870 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D LA56_1869 yefM; antitoxin YefM K19159 yefM; antitoxin YefM
D LA56_1510 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LA56_1827 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LA56_1115 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LA56_1569 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LA56_296 flavinator of succinate dehydrogenase family protein K09159 cptB; antitoxin CptB
D LA56_723 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:fpm04052]
D LA56_958 nicotinate phosphoribosyltransferase family protein K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:fpm01504]
D LA56_56 major Facilitator Superfamily protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D LA56_1282 drug resistance transporter, Bcr/CflA subfamily protein K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D LA56_265 beta-lactamase family protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D LA56_578 beta-lactamase family protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D LA56_532 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LA56_1177 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LA56_1178 acrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D LA56_754 outer membrane efflux family protein K18139 oprM; outer membrane protein, multidrug efflux system
D LA56_1278 outer membrane efflux family protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:fpm00537]
D LA56_808 trehalase family protein K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:fpm03100]
D LA56_1299 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LA56_1807 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LA56_788 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LA56_1084 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LA56_1038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LA56_671 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LA56_867 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LA56_1364 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LA56_858 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D LA56_1494 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LA56_1570 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LA56_1146 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LA56_1039 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LA56_859 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LA56_670 tRNA-His K14226 tRNA-His; tRNA His
D LA56_1300 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LA56_1806 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LA56_789 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LA56_669 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LA56_857 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LA56_902 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LA56_1197 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LA56_141 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LA56_142 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LA56_989 tRNA-Met K14230 tRNA-Met; tRNA Met
D LA56_1232 tRNA-Met K14230 tRNA-Met; tRNA Met
D LA56_1638 tRNA-Met K14230 tRNA-Met; tRNA Met
D LA56_673 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LA56_672 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LA56_310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LA56_1720 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LA56_1803 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LA56_1365 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LA56_1145 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LA56_1143 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LA56_1147 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LA56_1804 tRNA-Val K14237 tRNA-Val; tRNA Val
D LA56_90 tRNA-Val K14237 tRNA-Val; tRNA Val
D LA56_353 tRNA-Val K14237 tRNA-Val; tRNA Val
D LA56_1805 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LA56_790 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LA56_1301 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LA56_1297 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LA56_1809 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LA56_786 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LA56_1810 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LA56_1296 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LA56_785 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LA56_1843 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D LA56_557 saccharopine dehydrogenase family protein K00298 ceo; N5-(carboxyethyl)ornithine synthase [EC:1.5.1.24]
D LA56_1188 flavin containing amine oxidoreductase family protein K18208 RNLS; renalase [EC:1.6.3.5]
D LA56_399 flavodoxin-like fold family protein K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D LA56_1294 NADPH-dependent FMN reductase family protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D LA56_1359 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D LA56_505 msrA; peptide-methionine (S)-S-oxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D LA56_1745 msrB; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D LA56_1335 redoxin family protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D LA56_525 ahpC/TSA family protein K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D LA56_1191 Dyp-type peroxidase family protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D LA56_364 globin family protein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D LA56_1255 pyridine nucleotide-disulfide oxidoreductase family protein K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D LA56_600 ferritin-like domain protein K02217 ftnA; ferritin [EC:1.16.3.2]
D LA56_950 glutaredoxin family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D LA56_1693 transcriptional regulator, Spx/MgsR family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D LA56_1279 L-isoaspartate family protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D LA56_973 mycolic acid cyclopropane synthetase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D LA56_270 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D LA56_888 acetyltransferase domain protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D LA56_827 acetyltransferase domain protein K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D LA56_725 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D LA56_1066 CDP-alcohol phosphatidyltransferase family protein K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39]
D LA56_1102 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LA56_473 acyl-ACP thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LA56_510 acyl-ACP thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LA56_1421 mitochondrial PGP phosphatase family protein K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D LA56_900 hydrolase, TatD family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D LA56_1309 tatD related DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D LA56_321 tatD related DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D LA56_1842 polypeptide deformylase family protein K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LA56_1452 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LA56_386 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D LA56_120 reactive intermediate/imine deaminase family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D LA56_1546 AAA domain family protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D LA56_515 hydroxyethylthiazole kinase family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D LA56_658 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D LA56_10 mpl; L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D LA56_667 pgsB; poly-gamma-glutamate synthase PgsB K01932 capB; gamma-polyglutamate synthase [EC:6.3.2.-]
D LA56_604 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D LA56_1733 cadA; lysine decarboxylase, inducible K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D LA56_1325 fdxA; ferredoxin-1 K05524 fdxA; ferredoxin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D LA56_1441 hypothetical protein K06997 yggS; PLP dependent protein
D LA56_1821 acetyltransferase domain protein K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D LA56_1134 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
C 99987 Cofactor metabolism
D LA56_1793 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D LA56_1794 SCP-2 sterol transfer family protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D LA56_1235 membrane fusogenic activity family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
C 99988 Secondary metabolism
D LA56_1330 rieske [2Fe-2S] domain protein K22895 cruH; renierapurpurin 18,18'-hydroxylase
C 99999 Others
D LA56_1477 phospholipase/Carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D LA56_556 'Cold-shock' DNA-binding domain protein K03704 cspA; cold shock protein
D LA56_1823 cspC; cold shock-like protein CspC K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D LA56_628 tig; trigger factor K03545 tig; trigger factor
D LA56_243 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D LA56_1337 hypC; hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D LA56_1338 hypD; hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D LA56_1339 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D LA56_1336 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D LA56_1234 sigma-54 interaction domain protein K07391 comM; magnesium chelatase family protein
D LA56_879 2OG-Fe(II) oxygenase superfamily protein K07394 K07394; SM-20-related protein
C 99976 Replication and repair
D LA56_593 rmuC family protein K09760 rmuC; DNA recombination protein RmuC
D LA56_1762 archaeal holliday junction resolvase family protein K07460 yraN; putative endonuclease
D LA56_1836 GIY-YIG catalytic domain protein K07461 K07461; putative endonuclease
D LA56_1698 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D LA56_904 sigma-54 interaction domain protein K07478 ycaJ; putative ATPase
D LA56_268 transposase DDE domain protein K07481 K07481; transposase, IS5 family
D LA56_1006 integrase core domain protein K07482 K07482; transposase, IS30 family
D LA56_309 integrase core domain protein K07482 K07482; transposase, IS30 family
D LA56_935 putative transposase K07488 K07488; transposase
D LA56_661 putative transposase K07488 K07488; transposase
D LA56_934 putative transposase K07488 K07488; transposase
D LA56_631 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D LA56_246 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D LA56_663 transposase, Mutator family protein K07493 K07493; putative transposase
C 99979 Viral proteins
C 99998 Others
D LA56_195 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D LA56_1747 amino acid permease family protein K03293 TC.AAT; amino acid transporter, AAT family
D LA56_15 amino acid/peptide transporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LA56_749 amino acid/peptide transporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LA56_443 amino acid/peptide transporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LA56_573 amino acid/peptide transporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LA56_1400 amino acid/peptide transporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LA56_33 amino acid/peptide transporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LA56_65 amino acid/peptide transporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LA56_601 amino acid/peptide transporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LA56_390 dtpA; dipeptide and tripeptide permease A K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LA56_1432 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D LA56_1717 sodium Bile acid symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D LA56_1697 aspT; aspartate-alanine antiporter K07085 K07085; putative transport protein
C 99978 Cell growth
D LA56_1798 ispZ; intracellular septation protein A K06190 ispZ; intracellular septation protein
C 99993 Cell motility
D LA56_964 hypothetical protein K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D LA56_1639 proQ/FINO family protein K03607 proQ; ProP effector
D LA56_251 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D LA56_273 phoH-like family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D LA56_1645 lolA; outer membrane lipocarrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D LA56_1492 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D LA56_248 vacJ like lipofamily protein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D LA56_1673 vacJ like lipofamily protein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D LA56_1533 putative outer membrane protein K06077 slyB; outer membrane lipoprotein SlyB
D LA56_995 outer membrane family protein K06142 hlpA; outer membrane protein
D LA56_1030 capsule polysaccharide biosynthesis family protein K07265 kpsS; capsular polysaccharide export protein
D LA56_1008 capsule polysaccharide biosynthesis family protein K07266 kpsC; capsular polysaccharide export protein
D LA56_1010 capsule polysaccharide biosynthesis family protein K07266 kpsC; capsular polysaccharide export protein
D LA56_666 pgsC; poly-gamma-glutamate biosynthesis protein PgsC K22116 capC; gamma-polyglutamate biosynthesis protein CapC
D LA56_116 hlyD secretion family protein K01993 ABC-2.TX; HlyD family secretion protein
C 99994 Others
D LA56_61 cutC family protein K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D LA56_742 mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein K03796 bax; Bax protein
D LA56_449 mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein K03796 bax; Bax protein
D LA56_678 HAD hydrolase, IA, variant 3 family protein K07025 K07025; putative hydrolase of the HAD superfamily
D LA56_86 iron-sulfur cluster assembly accessory family protein K15724 erpA; iron-sulfur cluster insertion protein
D LA56_413 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D LA56_415 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D LA56_1535 yihY; YihY family inner membrane domain protein K07058 K07058; membrane protein
D LA56_866 fe-S metabolism associated domain protein K02426 sufE; cysteine desulfuration protein SufE
D LA56_349 rhodanese-like domain protein K07146 K07146; UPF0176 protein
D LA56_1730 lemA family protein K03744 lemA; LemA protein
D LA56_719 dedA; protein dedA K03975 dedA; membrane-associated protein
D LA56_720 hypothetical protein K03975 dedA; membrane-associated protein
D LA56_897 sulfite exporter TauE/SafE family protein K11312 K11312; cupin 2 domain-containing protein
D LA56_899 mannose-6-phosphate isomerase family protein K11312 K11312; cupin 2 domain-containing protein
D LA56_536 hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D LA56_677 AAA domain protein K06921 K06921; uncharacterized protein
D LA56_971 pyridine nucleotide-disulfide oxidoreductase family protein K06954 K06954; uncharacterized protein
D LA56_257 dicarboxylate symporter family protein K06956 K06956; uncharacterized protein
D LA56_585 succinylglutamate desuccinylase / Aspartoacylase family protein K06987 K06987; uncharacterized protein
D LA56_398 zinc carboxypeptidase family protein K06987 K06987; uncharacterized protein
D LA56_1649 hypothetical protein K07018 K07018; uncharacterized protein
D LA56_1183 rmlD substrate binding domain protein K07071 K07071; uncharacterized protein
D LA56_880 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D LA56_407 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D LA56_1719 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D LA56_438 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D LA56_1630 sel1 repeat family protein K07126 K07126; uncharacterized protein
D LA56_1413 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D LA56_469 yqey-like family protein K09117 K09117; uncharacterized protein
D LA56_464 hypothetical protein K09158 K09158; uncharacterized protein
D LA56_878 putative zinc-/iron-chelating domain protein K09160 K09160; uncharacterized protein
D LA56_972 hypothetical protein K09701 K09701; uncharacterized protein
D LA56_330 trm112p-like family protein K09791 K09791; uncharacterized protein
D LA56_957 hypothetical protein K09794 K09794; uncharacterized protein
D LA56_174 integral membrane TerC family protein K09799 K09799; uncharacterized protein
D LA56_245 rnfH Ubiquitin family protein K09801 K09801; uncharacterized protein
D LA56_489 S1 RNA binding domain protein K00243 K00243; uncharacterized protein
D LA56_961 hypothetical protein K09859 K09859; uncharacterized protein
D LA56_531 hypothetical protein K09859 K09859; uncharacterized protein
D LA56_1107 hypothetical protein K09861 K09861; uncharacterized protein
D LA56_716 yecA family protein K09895 K09895; uncharacterized protein
D LA56_306 hypothetical protein K09928 K09928; uncharacterized protein
D LA56_693 hypothetical protein K09929 K09929; uncharacterized protein
D LA56_694 hypothetical protein K09930 K09930; uncharacterized protein
D LA56_1388 hypothetical protein K09941 K09941; uncharacterized protein
D LA56_324 hypothetical protein K09966 K09966; uncharacterized protein
D LA56_1431 hypothetical protein K07220 K07220; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 1, 2024