+D GENES KO #

  KEGG Orthology (KO) - Pseudomonas azotoformans

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:pazo00010] D AYR47_00725 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AYR47_02110 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AYR47_08905 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AYR47_04680 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AYR47_02190 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AYR47_15090 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AYR47_00735 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AYR47_04695 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AYR47_08820 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D AYR47_13655 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AYR47_16145 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYR47_00660 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYR47_29885 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AYR47_21250 alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYR47_09490 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYR47_26445 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYR47_09485 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AYR47_17580 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_16265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_13675 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AYR47_14300 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D AYR47_30200 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AYR47_18750 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AYR47_17400 quinonprotein alcohol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D AYR47_07340 alcohol dehydrogenase K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D AYR47_18295 alcohol dehydrogenase K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D AYR47_03290 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D AYR47_17420 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D AYR47_02115 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_18355 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_30625 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_18010 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D AYR47_17450 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D AYR47_18610 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D AYR47_22015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AYR47_06410 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D AYR47_26020 aldehyde dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D AYR47_08400 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:pazo00020] D AYR47_16230 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D AYR47_19940 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AYR47_14975 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AYR47_25565 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AYR47_25570 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AYR47_16255 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D AYR47_16260 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AYR47_17580 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_16265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_16275 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AYR47_16270 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AYR47_16245 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AYR47_16250 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AYR47_16235 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AYR47_16240 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AYR47_00675 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AYR47_28285 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AYR47_11680 aspA; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AYR47_19150 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AYR47_15205 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D AYR47_11825 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D AYR47_06520 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D AYR47_06515 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D AYR47_08400 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D AYR47_21250 alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYR47_09490 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYR47_26445 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYR47_09485 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:pazo00030] D AYR47_02110 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AYR47_31070 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AYR47_20295 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AYR47_31065 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D AYR47_24055 3-carboxymuconate cyclase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D AYR47_20290 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D AYR47_03995 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AYR47_04705 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYR47_24455 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYR47_15505 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYR47_17150 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D AYR47_15180 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D AYR47_05305 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D AYR47_18475 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D AYR47_27335 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D AYR47_22015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AYR47_16095 ribose-phosphate pyrophosphokinase K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D AYR47_10940 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AYR47_00730 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D AYR47_26020 aldehyde dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D AYR47_17140 sugar dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D AYR47_07335 GMC family oxidoreductase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D AYR47_07330 gluconate 2-dehydrogenase K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D AYR47_12110 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D AYR47_20875 2-dehydro-3-deoxygluconokinase K11441 kguK; dehydrogluconokinase [EC:2.7.1.13] D AYR47_20865 D-glycerate dehydrogenase K00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43] D AYR47_30900 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D AYR47_24335 ketodeoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D AYR47_16150 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AYR47_01680 thioredoxin reductase K22345 E4.3.1.9; glucosaminate ammonia-lyase [EC:4.3.1.9] D AYR47_04680 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AYR47_08905 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:pazo00040] D AYR47_22480 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYR47_19440 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYR47_22775 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AYR47_03995 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AYR47_26645 hypothetical protein K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16] D AYR47_21040 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D AYR47_22275 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D AYR47_18435 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D AYR47_18615 3-oxoacyl-ACP reductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175] D AYR47_23125 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D AYR47_18585 ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D AYR47_11575 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] D AYR47_14285 class II aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:pazo00051] D AYR47_21035 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AYR47_12175 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D AYR47_17085 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D AYR47_19500 cpsB; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AYR47_19480 GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D AYR47_19485 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D AYR47_14285 class II aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D AYR47_19650 D-threo-aldose 1-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D AYR47_21440 short-chain dehydrogenase K18337 LRA1; L-rhamnose 1-dehydrogenase [EC:1.1.1.378 1.1.1.377 1.1.1.173] D AYR47_21470 L-rhamnonate dehydratase K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90] D AYR47_08905 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AYR47_11345 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D AYR47_18435 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D AYR47_21045 mannitol dehydrogenase K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67] D AYR47_12230 GDP-mannose dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D AYR47_12225 glycosyl transferase K19290 alg8; mannuronan synthase [EC:2.4.1.33] D AYR47_12220 hemolysin D K19291 alg44; mannuronan synthase [EC:2.4.1.33] D AYR47_12205 poly(beta-D-mannuronate) C5 epimerase K01795 algG; mannuronan 5-epimerase [EC:5.1.3.37] D AYR47_12195 algL; poly(beta-D-mannuronate) lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3] D AYR47_04680 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AYR47_02190 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AYR47_18475 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D AYR47_27390 glycerol-3-phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] C 00052 Galactose metabolism [PATH:pazo00052] D AYR47_17450 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D AYR47_18610 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D AYR47_09615 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D AYR47_22775 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AYR47_22015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AYR47_00725 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AYR47_19065 sorbitol dehydrogenase K21620 sorbD; galactitol 2-dehydrogenase [EC:1.1.1.16] D AYR47_07230 D-galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D AYR47_21400 isomerase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D AYR47_07220 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D AYR47_07225 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] C 00053 Ascorbate and aldarate metabolism [PATH:pazo00053] D AYR47_22480 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYR47_19440 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYR47_19650 D-threo-aldose 1-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D AYR47_27960 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D AYR47_18570 dihydroxy-acid dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25] D AYR47_23125 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D AYR47_18585 ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D AYR47_11570 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41] D AYR47_11585 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42] D AYR47_17475 NAD-dependent dehydratase K18981 udh; uronate dehydrogenase [EC:1.1.1.203] C 00500 Starch and sucrose metabolism [PATH:pazo00500] D AYR47_22775 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AYR47_14235 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AYR47_08640 cellulose synthase K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D AYR47_24155 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AYR47_23320 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D AYR47_21155 glycogen-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D AYR47_08890 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D AYR47_21150 alpha-amylase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D AYR47_23330 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D AYR47_21145 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D AYR47_23345 glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68] D AYR47_23335 maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D AYR47_23325 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D AYR47_01105 trehalose permease IIC protein K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D AYR47_01100 glucohydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D AYR47_22015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AYR47_00725 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AYR47_02110 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AYR47_21035 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pazo00520] D AYR47_15070 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AYR47_01055 PTS N-acetyl-D-glucosamine transporter K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D AYR47_01040 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D AYR47_21035 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AYR47_01045 iron dicitrate transport regulator FecR K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AYR47_06975 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AYR47_02195 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D AYR47_06985 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AYR47_21430 LpxA family transferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AYR47_03895 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D AYR47_15345 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D AYR47_04050 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D AYR47_04045 mannose-1-phosphate guanylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D AYR47_11780 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AYR47_25355 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AYR47_15415 UDP-N-acetyl-D-glucosamine dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D AYR47_15420 oxidoreductase K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D AYR47_15430 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D AYR47_15425 serine acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D AYR47_15470 dTDP-6-deoxy-3,4-keto-hexulose isomerase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D AYR47_22455 bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D AYR47_22450 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D AYR47_22460 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D AYR47_00725 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AYR47_22015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AYR47_22775 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AYR47_22480 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYR47_19440 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYR47_09615 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D AYR47_02110 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AYR47_19500 cpsB; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AYR47_12175 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D AYR47_17085 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D AYR47_19480 GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D AYR47_19485 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D AYR47_12230 GDP-mannose dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D AYR47_05660 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] C 00620 Pyruvate metabolism [PATH:pazo00620] D AYR47_02115 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_18355 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_30625 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_21250 alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYR47_09490 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYR47_26445 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYR47_09485 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AYR47_17580 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_16265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_14300 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D AYR47_13675 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AYR47_30200 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AYR47_18750 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AYR47_17400 quinonprotein alcohol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D AYR47_07340 alcohol dehydrogenase K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D AYR47_18295 alcohol dehydrogenase K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D AYR47_11095 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AYR47_16145 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYR47_00660 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYR47_13635 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AYR47_10275 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AYR47_10270 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AYR47_27490 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AYR47_03290 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D AYR47_17420 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D AYR47_18010 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D AYR47_28210 lldD; alpha-hydroxy-acid oxidizing enzyme K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D AYR47_24515 lldD; alpha-hydroxy-acid oxidizing enzyme K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D AYR47_20115 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D AYR47_25415 hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D AYR47_02300 4Fe-4S ferredoxin K18930 dld; D-lactate dehydrogenase D AYR47_21390 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D AYR47_21460 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D AYR47_22745 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D AYR47_20055 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D AYR47_11920 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D AYR47_12110 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D AYR47_09205 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D AYR47_22365 oxaloacetate decarboxylase K01003 bcpA; oxaloacetate decarboxylase [EC:4.1.1.112] D AYR47_06520 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D AYR47_06515 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D AYR47_15205 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D AYR47_11825 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D AYR47_00675 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AYR47_28285 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AYR47_11680 aspA; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AYR47_19150 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AYR47_13405 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AYR47_08400 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D AYR47_29885 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AYR47_04295 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D AYR47_03370 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_30110 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_22515 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_17715 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_24085 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_10455 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_01165 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pazo00630] D AYR47_25615 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D AYR47_02115 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_18355 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_30625 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_04295 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D AYR47_16230 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D AYR47_19940 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AYR47_14975 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AYR47_03370 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_30110 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_22515 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_17715 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_24085 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_10455 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_31040 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D AYR47_27875 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AYR47_02770 catalase K03781 katE; catalase [EC:1.11.1.6] D AYR47_25770 catalase K03781 katE; catalase [EC:1.11.1.6] D AYR47_07430 katE; catalase HPII K03781 katE; catalase [EC:1.11.1.6] D AYR47_26330 catalase K03781 katE; catalase [EC:1.11.1.6] D AYR47_03630 catalase K03781 katE; catalase [EC:1.11.1.6] D AYR47_12110 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D AYR47_11890 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D AYR47_18225 hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D AYR47_03990 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D AYR47_07300 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D AYR47_30360 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D AYR47_08870 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_17780 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_05425 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_05435 gamma-glutamylputrescine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_14840 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_19630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_02735 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AYR47_04430 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AYR47_31320 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D AYR47_05545 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AYR47_31330 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AYR47_17580 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_16265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_05540 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AYR47_31315 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AYR47_16160 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D AYR47_18670 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D AYR47_22680 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D AYR47_16150 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AYR47_21390 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D AYR47_21460 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D AYR47_01885 kynurenine formamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D AYR47_00605 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AYR47_04405 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AYR47_12445 acetamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D AYR47_08985 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:pazo00640] D AYR47_02115 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_18355 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_30625 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_18010 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D AYR47_11095 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AYR47_17595 2-oxoisovalerate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D AYR47_17585 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D AYR47_17580 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_16265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_22510 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D AYR47_22505 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_28225 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_15025 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AYR47_30105 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AYR47_13635 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AYR47_10275 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AYR47_10270 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AYR47_27490 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AYR47_12930 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AYR47_10555 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D AYR47_27875 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AYR47_16270 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AYR47_16275 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AYR47_01900 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AYR47_18400 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AYR47_10560 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AYR47_29940 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D AYR47_29925 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D AYR47_29935 Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D AYR47_29930 3-methylitaconate isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D AYR47_29945 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:pazo00650] D AYR47_03370 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_30110 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_22515 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_17715 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_24085 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_10455 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_28220 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D AYR47_15025 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AYR47_30105 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AYR47_22505 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_28225 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_22510 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D AYR47_15255 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D AYR47_31040 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D AYR47_09150 class II poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D AYR47_09160 class II poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D AYR47_14060 3-oxoadipate--succinyl-CoA transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D AYR47_14065 3-oxoadipate--succinyl-CoA transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D AYR47_21605 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D AYR47_16245 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AYR47_16250 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AYR47_16235 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AYR47_16240 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AYR47_08055 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D AYR47_12930 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AYR47_21275 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_08050 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_21695 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_27630 succinate dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D AYR47_14325 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AYR47_18215 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AYR47_26270 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AYR47_17725 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D AYR47_17720 succinyl-CoA--3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D AYR47_03365 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D AYR47_24320 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D AYR47_24315 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D AYR47_02005 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYR47_14775 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYR47_02000 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AYR47_26835 3-oxoacyl-ACP reductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:pazo00660] D AYR47_02005 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYR47_14775 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYR47_02000 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AYR47_23815 CoA-transferase K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22] D AYR47_16270 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AYR47_16275 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AYR47_23830 transposase K18291 ich-P; itaconyl-CoA hydratase / mesaconyl-C4 CoA hydratase [EC:4.2.1.56 4.2.1.-] D AYR47_23810 host specificity protein K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25] D AYR47_28135 4-hydroxy-4-methyl-2-oxoglutarate aldolase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D AYR47_24690 S-adenosylmethionine--2-demethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D AYR47_27535 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AYR47_16805 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AYR47_27530 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AYR47_16810 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AYR47_27520 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:pazo00562] D AYR47_01275 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AYR47_19315 3-phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8] D AYR47_19730 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D AYR47_23695 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D AYR47_18675 dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D AYR47_19720 xylose isomerase K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11] D AYR47_19710 myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D AYR47_19725 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D AYR47_19715 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D AYR47_19705 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D AYR47_01900 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AYR47_18400 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AYR47_10560 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AYR47_02190 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:pazo00190] D AYR47_25620 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D AYR47_25625 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D AYR47_25630 NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D AYR47_25635 NADH dehydrogenase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D AYR47_25640 NADH dehydrogenase K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D AYR47_25645 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D AYR47_25650 NADH:ubiquinone oxidoreductase K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D AYR47_25655 NADH dehydrogenase K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D AYR47_25660 NADH dehydrogenase K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D AYR47_25665 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D AYR47_25670 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D AYR47_25675 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D AYR47_25680 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D AYR47_25100 pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D AYR47_11230 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D AYR47_16245 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AYR47_16250 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AYR47_16235 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AYR47_16240 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AYR47_11530 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D AYR47_11535 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D AYR47_11540 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D AYR47_01535 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AYR47_07405 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AYR47_01540 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D AYR47_07380 MFS transporter K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D AYR47_07370 cytochrome oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D AYR47_07365 cytochrome B559 subunit alpha K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D AYR47_07375 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D AYR47_07400 cytochrome B K02259 COX15; heme a synthase [EC:1.17.99.9] D AYR47_29465 cytochrome C oxidase Cbb3 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D AYR47_22655 cytochrome C oxidase Cbb3 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D AYR47_29510 cytochrome C oxidase Cbb3 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D AYR47_29470 cytochrome C oxidase Cbb3 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D AYR47_29515 cytochrome C oxidase Cbb3 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D AYR47_29475 cytochrome-c oxidase K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D AYR47_29520 cytochrome oxidase K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D AYR47_29480 cytochrome C oxidase Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D AYR47_29525 cytochrome C oxidase Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D AYR47_01545 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D AYR47_01550 cytochrome ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D AYR47_01555 cytochrome ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D AYR47_02800 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D AYR47_02795 ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D AYR47_01435 cytochrome C K08738 CYC; cytochrome c D AYR47_14815 calcium channel protein K08738 CYC; cytochrome c D AYR47_07005 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D AYR47_06995 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D AYR47_07000 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D AYR47_07010 ATP synthase F0F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D AYR47_06990 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D AYR47_07025 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AYR47_07015 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AYR47_07020 ATP synthase F0F1 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D AYR47_03325 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D AYR47_05730 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AYR47_23085 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:pazo00710] D AYR47_04695 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AYR47_15090 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AYR47_00735 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AYR47_04680 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AYR47_08905 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AYR47_04705 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYR47_24455 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYR47_15505 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYR47_05305 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D AYR47_18475 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D AYR47_02190 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AYR47_03995 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AYR47_17150 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D AYR47_15180 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D AYR47_13405 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AYR47_08400 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D AYR47_09205 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] C 00720 Other carbon fixation pathways [PATH:pazo00720] D AYR47_29885 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AYR47_13405 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AYR47_06520 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D AYR47_06515 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D AYR47_00675 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AYR47_28285 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AYR47_11680 aspA; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AYR47_19150 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AYR47_16245 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AYR47_16250 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AYR47_16235 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AYR47_16240 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AYR47_16275 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AYR47_16270 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AYR47_03370 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_30110 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_22515 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_17715 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_24085 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_10455 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_25565 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AYR47_25570 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AYR47_19940 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AYR47_14975 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AYR47_13635 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AYR47_10275 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AYR47_10270 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AYR47_27490 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AYR47_27875 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AYR47_26515 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AYR47_04775 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AYR47_11095 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AYR47_02115 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_18355 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_30625 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:pazo00680] D AYR47_04400 aldehyde dismutase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D AYR47_13675 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AYR47_13680 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D AYR47_02735 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AYR47_04430 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AYR47_11890 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D AYR47_18225 hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D AYR47_16150 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AYR47_13655 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AYR47_13405 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AYR47_04680 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AYR47_08905 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AYR47_21265 aldehyde-activating protein K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147] D AYR47_11095 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AYR47_02115 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_18355 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_30625 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_29885 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AYR47_08820 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D AYR47_05330 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AYR47_15370 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AYR47_09715 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D AYR47_29975 thrH; phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] C 00910 Nitrogen metabolism [PATH:pazo00910] D AYR47_12445 acetamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D AYR47_29835 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D AYR47_23605 nitrite reductase K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D AYR47_23600 nitrite reductase small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D AYR47_03920 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D AYR47_22880 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D AYR47_20845 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D AYR47_02715 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D AYR47_08870 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_17780 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_05425 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_05435 gamma-glutamylputrescine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_14840 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_19630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_09255 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AYR47_09260 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D AYR47_14820 cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104] D AYR47_31300 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D AYR47_10645 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D AYR47_07350 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D AYR47_14825 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:pazo00920] D AYR47_16130 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D AYR47_08085 ABC transporter permease K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D AYR47_08090 sulfate ABC transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D AYR47_08095 sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein D AYR47_08100 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D AYR47_08345 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D AYR47_05485 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D AYR47_08335 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein D AYR47_08340 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D AYR47_08330 taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D AYR47_21505 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_20605 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_05465 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_30960 alkanesulfonate transporter substrate-binding subunit K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_25060 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_25065 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_27185 alkanesulfonate transporter substrate-binding subunit K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_19355 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_27975 alkanesulfonate transporter K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_25170 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_25050 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_17835 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_07715 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_21500 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_05455 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D AYR47_19405 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_07725 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_17830 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_25045 sulfonate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_21495 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_05450 ssuB; aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_19410 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_07720 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_25040 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_05460 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D AYR47_16870 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D AYR47_19400 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D AYR47_05470 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D AYR47_16875 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D AYR47_11080 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AYR47_17180 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D AYR47_09605 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D AYR47_08470 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D AYR47_29980 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D AYR47_17410 quinoprotein dehydrogenase-associated SoxYZ-like carrier K17226 soxY; sulfur-oxidizing protein SoxY D AYR47_23610 reductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D AYR47_11360 flavodoxin K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D AYR47_20135 sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D AYR47_17615 pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D AYR47_05095 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AYR47_09725 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AYR47_04085 thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D AYR47_08290 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AYR47_29915 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AYR47_13910 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AYR47_29910 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AYR47_14965 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AYR47_05000 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D AYR47_27465 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D AYR47_20980 dimethyl sulfone monooxygenase SfnG K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35] D AYR47_04220 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D AYR47_04215 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D AYR47_04230 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D AYR47_18985 enoyl-CoA hydratase K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155] D AYR47_25005 hypothetical protein K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:pazo00061] D AYR47_13635 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AYR47_10275 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AYR47_10270 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AYR47_27490 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AYR47_30320 acyl carrier protein K02078 acpP; acyl carrier protein D AYR47_09370 acyl carrier protein K02078 acpP; acyl carrier protein D AYR47_09375 acyl carrier protein K02078 acpP; acyl carrier protein D AYR47_30330 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AYR47_28945 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AYR47_09310 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AYR47_30315 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AYR47_09295 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AYR47_08310 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_12675 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_17160 dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_30325 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_25190 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_25200 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_26170 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_26840 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_09300 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_30000 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_24095 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_10450 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_16340 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D AYR47_13610 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AYR47_15255 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D AYR47_31025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_31030 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_24080 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_16375 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:pazo00071] D AYR47_03370 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_30110 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_22515 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_17715 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_24085 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_10455 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_28295 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AYR47_15030 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AYR47_15025 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AYR47_30105 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AYR47_22505 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_28225 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_22510 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D AYR47_23825 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AYR47_26255 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AYR47_18005 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AYR47_11510 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D AYR47_16570 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D AYR47_24100 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D AYR47_07640 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D AYR47_31025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_31030 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_24080 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_16375 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_24130 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D AYR47_18700 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D AYR47_06325 pyridine nucleotide-disulfide oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D AYR47_13675 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AYR47_14300 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:pazo00561] D AYR47_22680 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D AYR47_16150 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AYR47_30200 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AYR47_18750 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AYR47_18455 dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D AYR47_18450 dihydroxyacetone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D AYR47_13000 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D AYR47_13480 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D AYR47_30335 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D AYR47_04120 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AYR47_07110 glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AYR47_30090 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AYR47_13180 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D AYR47_10035 alpha/beta hydrolase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:pazo00564] D AYR47_16360 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D AYR47_12990 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D AYR47_13480 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D AYR47_04120 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AYR47_07110 glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AYR47_30090 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AYR47_13180 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D AYR47_15105 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D AYR47_30765 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D AYR47_03300 ethanolamine ammonia-lyase K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D AYR47_03305 ethanolamine ammonia-lyase K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D AYR47_22175 CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D AYR47_13580 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D AYR47_06730 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D AYR47_21240 phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24] D AYR47_21780 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D AYR47_01990 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D AYR47_09720 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D AYR47_18080 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D AYR47_03570 cardiolipin synthase B K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D AYR47_06030 phospholipase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:pazo00565] D AYR47_12640 hypothetical protein K18575 TMEM86B; alkenylglycerophosphocholine hydrolase [EC:3.3.2.2] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:pazo00592] D AYR47_28295 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AYR47_15030 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:pazo01040] D AYR47_08070 aminotransferase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D AYR47_15675 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D AYR47_02935 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D AYR47_06405 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:pazo00230] D AYR47_09670 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D AYR47_08465 ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D AYR47_22015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AYR47_10940 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AYR47_27470 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D AYR47_10240 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D AYR47_29185 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D AYR47_01000 purT; phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D AYR47_01075 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D AYR47_29180 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D AYR47_06430 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D AYR47_06435 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D AYR47_14605 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D AYR47_25595 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D AYR47_10245 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AYR47_29570 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D AYR47_15720 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D AYR47_13695 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AYR47_08460 haloacid dehalogenase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D AYR47_28680 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D AYR47_10780 D-alanyl-alanine synthetase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D AYR47_11190 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D AYR47_21590 nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1] D AYR47_11810 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D AYR47_01135 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AYR47_01220 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AYR47_05015 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D AYR47_05970 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D AYR47_29750 FAD-binding molybdopterin dehydrogenase K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D AYR47_29755 xanthine dehydrogenase K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D AYR47_02810 aldehyde oxidase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D AYR47_02815 FAD-binding molybdopterin dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D AYR47_02820 (2Fe-2S)-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D AYR47_01130 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AYR47_29765 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D AYR47_06125 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D AYR47_08605 hypothetical protein K01129 dgt; dGTPase [EC:3.1.5.1] D AYR47_15880 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D AYR47_06135 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D AYR47_05725 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D AYR47_29210 relA; (p)ppGpp synthetase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D AYR47_05875 adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D AYR47_09815 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D AYR47_03065 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D AYR47_15245 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D AYR47_10515 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D AYR47_13410 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AYR47_29205 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AYR47_24930 metallophosphatase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D AYR47_09680 serine/threonine protein phosphatase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D AYR47_04080 diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D AYR47_17180 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D AYR47_09605 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D AYR47_11080 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AYR47_28490 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D AYR47_28500 OHCU decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D AYR47_29990 Asp/Glu/hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3] D AYR47_28495 allantoinase K16842 hpxB; allantoinase [EC:3.5.2.5] D AYR47_28505 allantoicase K01477 alc; allantoicase [EC:3.5.3.4] D AYR47_28510 ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D AYR47_10080 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D AYR47_10085 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D AYR47_10100 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D AYR47_31300 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:pazo00240] D AYR47_02230 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AYR47_02235 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AYR47_04960 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AYR47_13055 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AYR47_04965 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AYR47_06645 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AYR47_29800 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D AYR47_06100 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D AYR47_16415 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D AYR47_13565 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D AYR47_01220 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AYR47_29205 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AYR47_04645 metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D AYR47_13645 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D AYR47_15390 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D AYR47_15720 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D AYR47_13695 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AYR47_28680 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D AYR47_11805 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D AYR47_04955 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D AYR47_15245 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D AYR47_17245 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D AYR47_13720 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D AYR47_30300 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D AYR47_06075 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AYR47_05255 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D AYR47_17510 dihydropyrimidine dehydrogenase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D AYR47_17505 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D AYR47_17515 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D AYR47_17525 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D AYR47_25130 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D AYR47_26620 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D AYR47_14650 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:pazo00250] D AYR47_17325 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_21555 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_29000 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AYR47_14530 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D AYR47_28150 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D AYR47_06455 L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D AYR47_27360 L-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D AYR47_28320 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AYR47_18975 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AYR47_15440 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AYR47_01170 carbon-nitrogen hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D AYR47_15830 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D AYR47_06445 aspA; class II fumarate hydratase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D AYR47_13065 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AYR47_24645 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AYR47_05855 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AYR47_30655 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AYR47_09815 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D AYR47_25595 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D AYR47_04960 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AYR47_08055 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D AYR47_12930 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AYR47_21275 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_08050 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_21695 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_27630 succinate dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D AYR47_09255 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AYR47_09260 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D AYR47_02715 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D AYR47_09450 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AYR47_08870 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_17780 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_05425 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_05435 gamma-glutamylputrescine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_14840 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_19630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_02230 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AYR47_02235 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AYR47_25025 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D AYR47_01045 iron dicitrate transport regulator FecR K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AYR47_06975 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AYR47_27470 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:pazo00260] D AYR47_30535 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AYR47_27515 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AYR47_00935 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AYR47_07460 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D AYR47_29975 thrH; phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] D AYR47_00930 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D AYR47_04440 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D AYR47_30545 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D AYR47_02735 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AYR47_04430 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AYR47_11890 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D AYR47_18225 hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D AYR47_12110 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D AYR47_22680 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D AYR47_16150 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AYR47_08820 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D AYR47_05330 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AYR47_15370 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AYR47_09715 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D AYR47_27090 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D AYR47_31320 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D AYR47_05545 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AYR47_31330 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AYR47_17580 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_16265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_05540 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AYR47_31315 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AYR47_21780 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D AYR47_01990 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D AYR47_04590 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D AYR47_04585 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D AYR47_14770 aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D AYR47_20510 aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D AYR47_04455 Rieske (2Fe-2S) protein K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251] D AYR47_04450 hybrid-cluster NAD(P)-dependent oxidoreductase K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251] D AYR47_04475 N-methylproline demethylase K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3] D AYR47_04470 (Fe-S)-binding protein K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit D AYR47_04465 electron transfer flavoprotein subunit alpha K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha D AYR47_04460 electron transfer flavoprotein subunit beta K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta D AYR47_27860 methyltryptophan oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1] D AYR47_04415 sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D AYR47_04425 sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D AYR47_04410 sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D AYR47_04420 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D AYR47_17170 methyltransferase K18896 gsmt; glycine/sarcosine N-methyltransferase [EC:2.1.1.156] D AYR47_23525 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D AYR47_23530 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D AYR47_04555 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AYR47_12475 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AYR47_31325 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AYR47_05300 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AYR47_24340 amino acid deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D AYR47_22665 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D AYR47_07245 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D AYR47_07250 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D AYR47_28580 2,4-diaminobutyrate 4-aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] C 00270 Cysteine and methionine metabolism [PATH:pazo00270] D AYR47_08290 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AYR47_29915 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AYR47_13910 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AYR47_29910 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AYR47_14965 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AYR47_23530 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D AYR47_21585 sulfurtransferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AYR47_21520 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AYR47_23525 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D AYR47_20150 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AYR47_28195 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D AYR47_04715 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AYR47_22635 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D AYR47_10780 D-alanyl-alanine synthetase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D AYR47_11190 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D AYR47_15355 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D AYR47_12925 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87] D AYR47_28385 acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D AYR47_27615 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D AYR47_19270 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D AYR47_15860 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D AYR47_04770 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AYR47_26415 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D AYR47_30535 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AYR47_27515 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AYR47_00935 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AYR47_05000 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D AYR47_27465 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D AYR47_17575 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYR47_08350 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D AYR47_04935 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AYR47_17325 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_21555 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_29000 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AYR47_05095 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AYR47_09725 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AYR47_22665 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D AYR47_08285 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D AYR47_22335 D-cysteine desulfhydrase K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25] D AYR47_04555 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AYR47_12475 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AYR47_31325 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AYR47_29220 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D AYR47_05330 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AYR47_15370 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:pazo00280] D AYR47_17575 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYR47_12440 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D AYR47_17595 2-oxoisovalerate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D AYR47_17585 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D AYR47_17580 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_16265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_22510 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D AYR47_23825 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AYR47_26255 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AYR47_18005 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AYR47_26280 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D AYR47_22505 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_28225 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_15025 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AYR47_30105 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AYR47_28295 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AYR47_15030 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AYR47_27875 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AYR47_01895 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D AYR47_01900 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AYR47_18400 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AYR47_10560 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AYR47_10555 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D AYR47_12930 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AYR47_26295 3-methylcrotonyl-CoA carboxylase K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D AYR47_26290 gamma-carboxygeranoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D AYR47_14325 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AYR47_18215 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AYR47_26270 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AYR47_17725 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D AYR47_17720 succinyl-CoA--3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D AYR47_03365 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D AYR47_24320 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D AYR47_03370 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_30110 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_22515 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_17715 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_24085 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_10455 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pazo00290] D AYR47_05300 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AYR47_27535 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AYR47_16805 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AYR47_27530 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AYR47_16810 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AYR47_27520 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D AYR47_02005 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYR47_14775 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYR47_02000 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AYR47_01995 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D AYR47_05150 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D AYR47_17575 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYR47_12440 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D AYR47_15830 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D AYR47_01165 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:pazo00300] D AYR47_00935 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AYR47_30535 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AYR47_27515 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AYR47_14280 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AYR47_23515 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AYR47_14590 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AYR47_13525 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D AYR47_15275 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AYR47_04205 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AYR47_13540 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D AYR47_13500 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AYR47_24825 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AYR47_05900 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AYR47_17220 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AYR47_05895 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D AYR47_28465 GntR family transcriptional regulator K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D AYR47_11990 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] C 00310 Lysine degradation [PATH:pazo00310] D AYR47_09935 aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D AYR47_01490 4-aminobutyrate aminotransferase K26062 K26062; 2-aminoadipate transaminase [EC:2.6.1.39] D AYR47_16260 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AYR47_17580 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_16265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_07640 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D AYR47_22505 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_28225 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_15025 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AYR47_30105 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AYR47_03370 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_30110 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_22515 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_17715 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_24085 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_10455 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_04170 amine oxidase K00468 davB; lysine 2-monooxygenase [EC:1.13.12.2] D AYR47_04175 carbon-nitrogen hydrolase K01506 davA; 5-aminopentanamidase [EC:3.5.1.30] D AYR47_22665 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D AYR47_13260 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D AYR47_13285 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D AYR47_08055 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D AYR47_12930 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AYR47_21275 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_08050 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_21695 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_24440 hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D AYR47_07645 CoA-transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D AYR47_28215 CoA-transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D AYR47_20360 lactate dehydrogenase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21] D AYR47_02320 ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] D AYR47_09940 FAD-dependent oxidoreductase K26065 amaA; L-pipecolate oxidase D AYR47_20405 gamma-butyrobetaine dioxygenase K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1] D AYR47_04540 gamma-butyrobetaine dioxygenase K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1] C 00220 Arginine biosynthesis [PATH:pazo00220] D AYR47_13020 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D AYR47_31295 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D AYR47_13065 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AYR47_24645 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AYR47_05855 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AYR47_30655 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AYR47_30810 allophanate hydrolase K01941 uca; urea carboxylase [EC:6.3.4.6] D AYR47_10080 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D AYR47_10085 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D AYR47_10100 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D AYR47_31290 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D AYR47_25025 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D AYR47_27360 L-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D AYR47_08870 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_17780 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_05425 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_05435 gamma-glutamylputrescine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_14840 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_19630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_02230 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AYR47_02235 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AYR47_31300 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D AYR47_02715 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D AYR47_17325 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_21555 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_29000 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AYR47_15830 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D AYR47_05490 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D AYR47_00580 argJ; ornithine acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D AYR47_24715 GCN5 family acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1] D AYR47_06085 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D AYR47_03910 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D AYR47_15275 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AYR47_04205 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AYR47_24775 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] D AYR47_27990 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] D AYR47_05495 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:pazo00330] D AYR47_24845 amidase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D AYR47_17245 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D AYR47_23140 5-oxoprolinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D AYR47_23145 methylhydantoinase K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D AYR47_20075 lysine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D AYR47_10310 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D AYR47_08515 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D AYR47_18640 peptidyl-arginine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D AYR47_18655 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D AYR47_18645 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D AYR47_17860 hydratase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D AYR47_11380 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AYR47_22635 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D AYR47_24960 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D AYR47_05420 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D AYR47_24270 hypothetical protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D AYR47_13255 spermidine dehydrogenase K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6] D AYR47_13260 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D AYR47_13285 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D AYR47_06040 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-] D AYR47_27090 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D AYR47_22180 arginine aminotransferase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D AYR47_18015 decarboxylase K12253 aruI; 5-guanidino-2-oxopentanoate decarboxylase [EC:4.1.1.75] D AYR47_29235 agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7] D AYR47_23735 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AYR47_30580 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D AYR47_30565 succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D AYR47_30585 argD; acetylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D AYR47_30570 astD; N-succinylglutamate 5-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D AYR47_30555 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D AYR47_27440 gamma-glutamylputrescine oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D AYR47_26820 FAD-dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D AYR47_06015 FAD-dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D AYR47_19640 FAD-dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D AYR47_20425 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D AYR47_19935 rocD; ornithine--oxo-acid aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D AYR47_23470 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D AYR47_04990 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D AYR47_09450 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AYR47_17555 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12] D AYR47_01710 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AYR47_03225 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D AYR47_09000 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D AYR47_17325 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_21555 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_29000 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AYR47_02320 ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] C 00340 Histidine metabolism [PATH:pazo00340] D AYR47_11785 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D AYR47_09810 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D AYR47_09070 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D AYR47_09075 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D AYR47_06635 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D AYR47_08785 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D AYR47_08775 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D AYR47_08790 imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D AYR47_08770 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D AYR47_11795 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_15380 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_01530 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_11790 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D AYR47_30950 phenylalanine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D AYR47_09345 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D AYR47_08965 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D AYR47_08970 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D AYR47_08940 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D AYR47_08980 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D AYR47_08920 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D AYR47_08985 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D AYR47_27090 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] C 00350 Tyrosine metabolism [PATH:pazo00350] D AYR47_17325 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_21555 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_29000 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AYR47_11795 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_15380 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_01530 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_27615 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D AYR47_22715 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D AYR47_12415 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D AYR47_12425 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D AYR47_12420 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D AYR47_27090 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D AYR47_26875 NAD-dependent phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D AYR47_13675 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AYR47_14300 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D AYR47_26870 acyl-CoA dehydrogenase K23492 C2-hpah; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D AYR47_26865 nitrilotriacetate monooxygenase K23470 C1-hpah; 4-hydroxyphenylacetate 3-hydroxylase, reductase component [EC:1.5.1.36] D AYR47_26790 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15] D AYR47_26785 2-hydroxymuconic semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] D AYR47_26795 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D AYR47_14755 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D AYR47_26775 4-hydroxyphenylacetate isomerase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D AYR47_26780 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D AYR47_26805 2-oxo-hepta-3-ene-1,7-dioate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] D AYR47_21465 5-keto-4-deoxy-D-glucarate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D AYR47_26810 2-keto-3-deoxy-L-rhamnonate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D AYR47_21275 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_08050 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_21695 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_19845 fumarylacetoacetate hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:pazo00360] D AYR47_28990 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D AYR47_27090 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D AYR47_26875 NAD-dependent phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D AYR47_18000 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D AYR47_22505 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_28225 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_28220 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D AYR47_17325 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_21555 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_29000 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AYR47_11795 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_15380 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_01530 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_27615 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D AYR47_22670 GNAT family acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D AYR47_22715 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D AYR47_04815 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D AYR47_06000 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D AYR47_23735 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AYR47_18695 Rieske family ferredoxin K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D AYR47_18700 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism [PATH:pazo00380] D AYR47_01880 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D AYR47_01885 kynurenine formamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D AYR47_01825 kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D AYR47_16260 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AYR47_17580 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_16265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_07640 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D AYR47_22505 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_28225 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_15025 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AYR47_30105 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AYR47_03370 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_30110 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_22515 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_17715 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_24085 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_10455 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_27090 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D AYR47_20845 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D AYR47_23735 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AYR47_02770 catalase K03781 katE; catalase [EC:1.11.1.6] D AYR47_25770 catalase K03781 katE; catalase [EC:1.11.1.6] D AYR47_07430 katE; catalase HPII K03781 katE; catalase [EC:1.11.1.6] D AYR47_26330 catalase K03781 katE; catalase [EC:1.11.1.6] D AYR47_03630 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pazo00400] D AYR47_18045 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AYR47_15700 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AYR47_15795 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AYR47_09240 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D AYR47_02885 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D AYR47_10280 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D AYR47_28030 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D AYR47_02900 4-hydroxyphenylpyruvate dioxygenase K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D AYR47_02890 shikimate dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24] D AYR47_07190 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D AYR47_18485 quinate dehydrogenase K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8] D AYR47_09235 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D AYR47_21210 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D AYR47_15385 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D AYR47_28395 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D AYR47_03985 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AYR47_03980 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D AYR47_03975 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D AYR47_27495 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D AYR47_03970 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D AYR47_07245 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D AYR47_07250 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D AYR47_08865 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D AYR47_15375 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D AYR47_14835 ArtI protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91] D AYR47_17325 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_21555 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_29000 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AYR47_11795 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_15380 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_01530 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_27615 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D AYR47_28990 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:pazo00410] D AYR47_12930 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AYR47_13255 spermidine dehydrogenase K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6] D AYR47_13260 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D AYR47_13285 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D AYR47_17510 dihydropyrimidine dehydrogenase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D AYR47_17505 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D AYR47_17515 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D AYR47_17525 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D AYR47_25130 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D AYR47_26620 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D AYR47_14650 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D AYR47_10555 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D AYR47_22505 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_28225 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_15025 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AYR47_30105 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AYR47_22510 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D AYR47_01900 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AYR47_18400 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AYR47_10560 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:pazo00430] D AYR47_21645 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYR47_27215 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYR47_10785 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYR47_08330 taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D AYR47_11095 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] C 00440 Phosphonate and phosphinate metabolism [PATH:pazo00440] D AYR47_26405 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1] D AYR47_26400 2-aminoethylphosphonate--pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D AYR47_05215 phosphohydrolase K21196 phnZ; 2-amino-1-hydroxyethylphosphonate dioxygenase (glycine-forming) [EC:1.13.11.78] D AYR47_16070 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D AYR47_16060 phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D AYR47_16065 carbon-phosphorus lyase subunit PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D AYR47_16085 phosphonate ABC transporter ATP-binding protein K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D AYR47_16090 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D AYR47_16075 carbon-phosphorus lyase K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D AYR47_16100 phosphonate metabolism protein PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:pazo00450] D AYR47_21585 sulfurtransferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AYR47_21520 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AYR47_20150 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AYR47_28195 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D AYR47_23530 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D AYR47_19270 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D AYR47_11080 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AYR47_17660 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D AYR47_13090 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:pazo00460] D AYR47_14235 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AYR47_20845 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D AYR47_21645 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYR47_27215 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYR47_10785 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYR47_06455 L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D AYR47_02735 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AYR47_04430 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AYR47_12445 acetamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00470 D-Amino acid metabolism [PATH:pazo00470] D AYR47_05990 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AYR47_12025 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AYR47_10770 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AYR47_22665 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D AYR47_25025 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D AYR47_27360 L-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D AYR47_10985 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D AYR47_12005 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AYR47_28150 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D AYR47_24340 amino acid deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D AYR47_08285 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D AYR47_24825 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AYR47_05900 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AYR47_17220 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AYR47_05895 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D AYR47_18375 FAD-dependent oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6] D AYR47_18380 ornithine cyclodeaminase K19744 dauB; L-arginine dehydrogenase [EC:1.4.1.25] D AYR47_23115 hydroxyproline-2-epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8] D AYR47_23130 FAD-dependent oxidoreductase K21060 lhpB; D-hydroxyproline dehydrogenase [EC:1.5.99.-] D AYR47_23120 dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D AYR47_23125 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D AYR47_18585 ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D AYR47_04815 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D AYR47_06000 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:pazo00480] D AYR47_21645 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYR47_27215 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYR47_10785 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYR47_05645 calcium transporter ChaC K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D AYR47_30815 lactam utilization protein LamB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D AYR47_14935 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D AYR47_14940 allophanate hydrolase K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D AYR47_14945 allophanate hydrolase K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D AYR47_08350 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D AYR47_04935 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AYR47_12570 aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AYR47_20245 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D AYR47_16580 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_26905 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_30915 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_30945 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_28460 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_05860 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_24880 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_27870 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_24045 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_22770 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D AYR47_25565 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AYR47_25570 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AYR47_20865 D-glycerate dehydrogenase K00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43] D AYR47_20290 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D AYR47_31070 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AYR47_20295 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AYR47_29090 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D AYR47_15840 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D AYR47_01700 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D AYR47_11380 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AYR47_22635 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:pazo00540] D AYR47_13615 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D AYR47_12045 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D AYR47_13605 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D AYR47_26205 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D AYR47_13620 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D AYR47_25375 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D AYR47_11745 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D AYR47_13650 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D AYR47_11740 phenylphosphate carboxylase subunit delta K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D AYR47_25365 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AYR47_09645 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D AYR47_07135 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AYR47_28535 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AYR47_21745 aspartyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D AYR47_14970 aspartyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D AYR47_26715 4-amino-4-deoxy-L-arabinose lipid A transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D AYR47_22465 4-amino-4-deoxy-L-arabinose lipid A transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D AYR47_10990 lipid A 3-O-deacylase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D AYR47_11945 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D AYR47_09610 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D AYR47_07115 histidinol-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D AYR47_09505 ADP-heptose--LPS heptosyltransferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D AYR47_09500 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D AYR47_09515 heptose kinase K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235] D AYR47_20285 hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D AYR47_09510 glucosyltransferase I RfaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pazo00541] D AYR47_22775 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AYR47_09615 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D AYR47_22480 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYR47_19440 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYR47_08500 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AYR47_08505 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AYR47_08495 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AYR47_08490 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D AYR47_03555 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D AYR47_05660 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D AYR47_12175 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D AYR47_17085 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D AYR47_19500 cpsB; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AYR47_19480 GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D AYR47_19485 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D AYR47_06985 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AYR47_21430 LpxA family transferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AYR47_15415 UDP-N-acetyl-D-glucosamine dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D AYR47_15420 oxidoreductase K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D AYR47_15430 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D AYR47_15425 serine acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D AYR47_15470 dTDP-6-deoxy-3,4-keto-hexulose isomerase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] C 00550 Peptidoglycan biosynthesis [PATH:pazo00550] D AYR47_11780 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AYR47_25355 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AYR47_12020 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D AYR47_12005 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AYR47_11990 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AYR47_12025 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AYR47_10770 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AYR47_13575 farnesyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AYR47_21675 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AYR47_12000 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AYR47_12015 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AYR47_05050 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D AYR47_09210 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AYR47_02020 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D AYR47_06760 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D AYR47_10335 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D AYR47_03205 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AYR47_16960 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AYR47_11985 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AYR47_03185 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AYR47_29785 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D AYR47_12405 penicillin-binding protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:pazo00552] D AYR47_21675 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:pazo00543] D AYR47_19490 colanic acid biosynthesis glycosyltransferase WcaI K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI D AYR47_19470 acetyltransferase K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-] D AYR47_12225 glycosyl transferase K19290 alg8; mannuronan synthase [EC:2.4.1.33] D AYR47_12220 hemolysin D K19291 alg44; mannuronan synthase [EC:2.4.1.33] D AYR47_12190 poly(beta-D-mannuronate) O-acetylase K19294 algI; alginate O-acetyltransferase complex protein AlgI D AYR47_08670 cellulose acetylase K19294 algI; alginate O-acetyltransferase complex protein AlgI D AYR47_12185 alginate O-acetyltransferase K19295 algJ; alginate O-acetyltransferase complex protein AlgJ D AYR47_08675 cell division protein FtsQ K19295 algJ; alginate O-acetyltransferase complex protein AlgJ D AYR47_12180 alginate O-acetyltransferase K19296 algF; alginate O-acetyltransferase complex protein AlgF D AYR47_08665 cell division protein FtsQ K19296 algF; alginate O-acetyltransferase complex protein AlgF D AYR47_12200 alginate O-acetyltransferase K19293 algX; alginate biosynthesis protein AlgX D AYR47_17090 undecaprenyl-phosphate glucose phosphotransferase K20997 pslA; polysaccharide biosynthesis protein PslA D AYR47_17080 glycosyl transferase K25205 pslC; polysaccharide biosynthesis protein PslC D AYR47_17065 glycosyl transferase family 1 K20999 pslF; polysaccharide biosynthesis protein PslF D AYR47_17055 glycosyl transferase K21001 pslH; polysaccharide biosynthesis protein PslH D AYR47_17050 glycosyl transferase family 1 K21002 pslI; polysaccharide biosynthesis protein PslI D AYR47_07830 poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D AYR47_07835 poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD D AYR47_08290 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AYR47_29915 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:pazo00730] D AYR47_09655 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D AYR47_03080 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D AYR47_01255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AYR47_16890 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AYR47_08875 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D AYR47_03445 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D AYR47_05035 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D AYR47_03085 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D AYR47_03475 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D AYR47_09745 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D AYR47_13410 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:pazo00740] D AYR47_03465 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D AYR47_03490 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D AYR47_03500 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D AYR47_05915 HAD family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D AYR47_03485 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D AYR47_30550 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D AYR47_03495 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D AYR47_11120 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D AYR47_08560 acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D AYR47_26865 nitrilotriacetate monooxygenase K23470 C1-hpah; 4-hydroxyphenylacetate 3-hydroxylase, reductase component [EC:1.5.1.36] D AYR47_05470 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D AYR47_16875 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D AYR47_29140 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D AYR47_09670 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D AYR47_03275 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:pazo00750] D AYR47_13895 pyridoxine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D AYR47_06575 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D AYR47_04700 gapA; glyceraldehyde-3-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D AYR47_14995 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D AYR47_15370 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AYR47_04065 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D AYR47_12610 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D AYR47_00930 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:pazo00760] D AYR47_14530 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D AYR47_31345 quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D AYR47_09925 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D AYR47_19080 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D AYR47_15720 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D AYR47_13695 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AYR47_03220 nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D AYR47_29205 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AYR47_21230 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D AYR47_09920 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D AYR47_19085 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D AYR47_13145 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D AYR47_19075 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D AYR47_20210 ppnK; NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D AYR47_15100 pyridine nucleotide-disulfide oxidoreductase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D AYR47_07625 NAD(P)(+) transhydrogenase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D AYR47_07630 NADP transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D AYR47_07620 NAD synthetase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D AYR47_21630 (2Fe-2S)-binding protein K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1] D AYR47_21635 aldehyde dehydrogenase K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1] D AYR47_21615 6-hydroxynicotinate 3-monooxygenase K14974 nicC; 6-hydroxynicotinate 3-monooxygenase [EC:1.14.13.114] D AYR47_21620 2,5-dihydroxypyridine 5,6-dioxygenase K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9] D AYR47_21610 alpha/beta hydrolase K15357 nicD; N-formylmaleamate deformylase [EC:3.5.1.106] D AYR47_21600 isochorismatase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107] D AYR47_21605 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D AYR47_21275 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_08050 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_21695 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYR47_27630 succinate dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] C 00770 Pantothenate and CoA biosynthesis [PATH:pazo00770] D AYR47_02005 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYR47_14775 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYR47_02000 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AYR47_01995 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D AYR47_05150 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D AYR47_02100 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D AYR47_28070 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D AYR47_00560 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D AYR47_03850 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D AYR47_06070 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D AYR47_29205 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AYR47_05120 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D AYR47_11265 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D AYR47_14150 ACP phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D AYR47_17575 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYR47_17510 dihydropyrimidine dehydrogenase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D AYR47_17505 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D AYR47_17515 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D AYR47_17525 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D AYR47_25130 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D AYR47_26620 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D AYR47_14650 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] C 00780 Biotin metabolism [PATH:pazo00780] D AYR47_04245 malonyl-[acyl-carrier protein] O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D AYR47_09310 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AYR47_30315 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AYR47_09295 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AYR47_08310 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_12675 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_17160 dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_30325 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_25190 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_25200 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_26170 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_26840 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_09300 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_30000 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_24095 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_10450 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_13610 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AYR47_04250 transporter K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D AYR47_04255 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D AYR47_04805 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D AYR47_04240 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D AYR47_04260 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D AYR47_03855 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:pazo00785] D AYR47_03175 octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D AYR47_03170 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D AYR47_17580 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_16265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_21250 alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYR47_09490 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYR47_26445 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYR47_09485 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AYR47_16255 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D AYR47_16260 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AYR47_17595 2-oxoisovalerate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D AYR47_17585 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D AYR47_31320 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D AYR47_05545 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AYR47_31330 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AYR47_05540 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AYR47_31315 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:pazo00790] D AYR47_28430 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D AYR47_01660 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D AYR47_06615 GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D AYR47_16550 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D AYR47_11355 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D AYR47_04115 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D AYR47_04110 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D AYR47_02095 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D AYR47_02200 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D AYR47_05195 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D AYR47_27485 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D AYR47_03465 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D AYR47_03490 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D AYR47_29970 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D AYR47_30310 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D AYR47_01665 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7] D AYR47_01655 dihydrofolate reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D AYR47_17270 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D AYR47_28995 phhB; 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D AYR47_28990 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D AYR47_00450 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D AYR47_00445 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D AYR47_15145 preQ(1) synthase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D AYR47_30280 radical SAM protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D AYR47_12250 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D AYR47_12260 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D AYR47_15940 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D AYR47_15945 molybdenum cofactor biosynthesis protein MoaA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D AYR47_30375 molybdopterin-guanine dinucleotide biosynthesis protein MobA K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D AYR47_15935 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:pazo00670] D AYR47_05195 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D AYR47_01655 dihydrofolate reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D AYR47_26515 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AYR47_02735 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AYR47_04430 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AYR47_29185 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D AYR47_10245 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AYR47_07155 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D AYR47_05545 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AYR47_31330 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AYR47_20150 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AYR47_05255 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D AYR47_00605 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AYR47_04405 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AYR47_04775 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AYR47_05600 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:pazo00860] D AYR47_27605 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AYR47_10965 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D AYR47_03355 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AYR47_03090 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AYR47_05735 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AYR47_17690 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AYR47_05845 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D AYR47_05840 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D AYR47_09265 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D AYR47_07185 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D AYR47_29555 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D AYR47_03915 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D AYR47_11060 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D AYR47_05835 heme biosynthesis operon protein HemX K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D AYR47_25505 sirohydrochlorin ferrochelatase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D AYR47_29845 uroporphyrin-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D AYR47_01535 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AYR47_07405 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AYR47_07400 cytochrome B K02259 COX15; heme a synthase [EC:1.17.99.9] D AYR47_10215 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D AYR47_10205 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D AYR47_10220 precorrin-3B C(17)-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131] D AYR47_20165 precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D AYR47_20170 cobalamin biosynthesis protein CobE K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D AYR47_18930 precorrin 6A synthase K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D AYR47_10195 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D AYR47_10200 precorrin-6Y C5,15-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D AYR47_10210 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D AYR47_29145 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D AYR47_20190 cobalamin biosynthesis protein CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D AYR47_00570 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D AYR47_29150 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D AYR47_29125 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D AYR47_29135 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D AYR47_29130 threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC D AYR47_29120 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D AYR47_29105 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D AYR47_29110 alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D AYR47_20195 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D AYR47_00755 heme oxygenase K07215 pigA; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D AYR47_00845 heme iron utilization protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D AYR47_10030 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D AYR47_13035 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D AYR47_03625 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pazo00130] D AYR47_00485 4-hydroxybenzoyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D AYR47_06335 chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D AYR47_06340 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D AYR47_05665 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D AYR47_03275 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AYR47_05560 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D AYR47_15350 bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D AYR47_05570 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D AYR47_09090 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D AYR47_03940 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D AYR47_16380 esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D AYR47_21200 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D AYR47_18040 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D AYR47_03410 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D AYR47_25440 NAD(P)H-quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D AYR47_22715 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:pazo00900] D AYR47_03445 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D AYR47_13585 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D AYR47_13665 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D AYR47_10950 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D AYR47_13685 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D AYR47_01200 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D AYR47_11140 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D AYR47_03370 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_30110 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_22515 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_17715 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_24085 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_10455 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_03275 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AYR47_10800 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D AYR47_03440 geranyl transferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D AYR47_01730 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D AYR47_13575 farnesyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:pazo00907] D AYR47_22505 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_28225 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_15025 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AYR47_30105 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AYR47_28650 2,4-dienoyl-CoA reductase K13774 atuB; citronellol/citronellal dehydrogenase D AYR47_28370 long-chain acyl-CoA synthetase K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-] D AYR47_28660 acyl-CoA dehydrogenase K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-] D AYR47_28670 3-methylcrotonyl-CoA carboxylase K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5] D AYR47_28665 enoyl-CoA hydratase K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57] D AYR47_14325 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AYR47_18215 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AYR47_26270 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AYR47_28295 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AYR47_15030 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D AYR47_04705 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYR47_24455 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYR47_15505 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:pazo00523] D AYR47_08500 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AYR47_08505 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AYR47_08495 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AYR47_08490 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D AYR47_03555 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:pazo01054] D AYR47_28150 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:pazo01053] D AYR47_30410 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D AYR47_21915 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D AYR47_21905 isochorismate-pyruvate lyase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] D AYR47_21960 non-ribosomal peptide synthetase K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69] D AYR47_21925 thiazolinyl imide reductase K12241 pchG; pyochelin biosynthesis protein PchG C 01055 Biosynthesis of vancomycin group antibiotics D AYR47_08505 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:pazo00946] D AYR47_14235 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AYR47_20570 fumarylacetoacetate hydrolase K26185 fdeI; naringenin degradation protein FdeI C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids [PATH:pazo00996] D AYR47_20520 p-hydroxycinnamoyl CoA hydratase/lyase K18383 ferB; feruloyl-CoA hydratase/lyase [EC:4.1.2.61] C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D AYR47_05370 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:pazo00332] D AYR47_01710 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AYR47_03225 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:pazo00261] D AYR47_28575 antibiotic synthesis protein MbtH K05375 mbtH; MbtH protein D AYR47_11080 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AYR47_30535 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AYR47_27515 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AYR47_14280 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AYR47_23515 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AYR47_14590 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AYR47_10090 acetyltransferase K19113 ttr; acetyltransferase [EC:2.3.1.-] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:pazo00521] D AYR47_00725 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AYR47_22015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AYR47_01275 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AYR47_19730 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D AYR47_23695 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D AYR47_18675 dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D AYR47_08500 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AYR47_08505 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AYR47_08495 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AYR47_08490 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D AYR47_03555 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D AYR47_00725 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:pazo00525] D AYR47_08500 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AYR47_08505 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:pazo00401] D AYR47_15385 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D AYR47_17325 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_21555 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_29000 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AYR47_11795 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_15380 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_01530 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_27615 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D AYR47_03985 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AYR47_03980 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D AYR47_30330 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AYR47_08310 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_12675 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_17160 dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_30325 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_25190 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_25200 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_26170 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_26840 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_09300 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_30000 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_24095 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_10450 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D AYR47_30320 acyl carrier protein K02078 acpP; acyl carrier protein D AYR47_09370 acyl carrier protein K02078 acpP; acyl carrier protein D AYR47_09375 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:pazo00999] D AYR47_04715 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AYR47_07190 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D AYR47_14235 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:pazo00362] D AYR47_21830 benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D AYR47_21835 benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D AYR47_21840 NADH oxidase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D AYR47_21845 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D AYR47_01835 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D AYR47_01845 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D AYR47_01840 muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D AYR47_14095 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D AYR47_29365 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D AYR47_28295 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AYR47_15030 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AYR47_14070 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D AYR47_08535 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D AYR47_14080 protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D AYR47_14075 protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D AYR47_19160 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D AYR47_14090 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D AYR47_11595 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D AYR47_25805 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D AYR47_14100 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D AYR47_28135 4-hydroxy-4-methyl-2-oxoglutarate aldolase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D AYR47_24690 S-adenosylmethionine--2-demethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D AYR47_18700 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D AYR47_01230 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D AYR47_14805 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D AYR47_00485 4-hydroxybenzoyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D AYR47_30105 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AYR47_15025 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AYR47_07640 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D AYR47_22505 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_28225 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_28220 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D AYR47_03370 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_30110 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_22515 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_17715 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_24085 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_10455 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:pazo00627] D AYR47_23735 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AYR47_20845 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D AYR47_03275 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AYR47_01860 anthranilate 1,2-dioxygenase large subunit K05599 antA; anthranilate 1,2-dioxygenase (deaminating, decarboxylating) large subunit [EC:1.14.12.1] D AYR47_01865 benzoate 1,2-dioxygenase small subunit K05600 antB; anthranilate 1,2-dioxygenase (deaminating, decarboxylating) small subunit [EC:1.14.12.1] D AYR47_01870 antC; anthranilate dioxygenase reductase K11311 antC; anthranilate 1,2-dioxygenase reductase component [EC:1.18.1.-] D AYR47_20525 salicylaldehyde dehydrogenase K21802 vdh; vanillin dehydrogenase [EC:1.2.1.67] D AYR47_22505 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_28225 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:pazo00364] D AYR47_21830 benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D AYR47_21835 benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D AYR47_21840 NADH oxidase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D AYR47_21845 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D AYR47_01835 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D AYR47_23775 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D AYR47_12450 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D AYR47_01845 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00625 Chloroalkane and chloroalkene degradation [PATH:pazo00625] D AYR47_14300 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D AYR47_13675 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AYR47_04400 aldehyde dismutase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D AYR47_17400 quinonprotein alcohol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D AYR47_16825 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D AYR47_15265 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D AYR47_22230 hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pazo00361] D AYR47_01835 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D AYR47_23775 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D AYR47_12450 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D AYR47_01845 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D AYR47_15265 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D AYR47_22230 hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D AYR47_16825 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] C 00623 Toluene degradation [PATH:pazo00623] D AYR47_01835 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D AYR47_01845 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D AYR47_23775 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D AYR47_12450 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:pazo00622] D AYR47_21830 benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D AYR47_21835 benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D AYR47_21840 NADH oxidase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D AYR47_21845 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D AYR47_08535 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation [PATH:pazo00633] D AYR47_18735 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D AYR47_28295 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AYR47_15030 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:pazo00643] D AYR47_26875 NAD-dependent phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D AYR47_12415 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D AYR47_12425 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D AYR47_12420 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D AYR47_23735 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AYR47_20845 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D AYR47_14060 3-oxoadipate--succinyl-CoA transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D AYR47_14065 3-oxoadipate--succinyl-CoA transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation [PATH:pazo00791] D AYR47_30810 allophanate hydrolase K01941 uca; urea carboxylase [EC:6.3.4.6] D AYR47_10080 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D AYR47_10085 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D AYR47_10100 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:pazo00930] D AYR47_17100 dimethylglycine dehydrogenase K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D AYR47_24130 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D AYR47_22505 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_28225 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AYR47_15025 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AYR47_30105 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation D AYR47_08535 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:pazo00626] D AYR47_14300 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D AYR47_13675 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D AYR47_14080 protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D AYR47_14075 protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:pazo03020] D AYR47_03785 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AYR47_03640 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AYR47_06130 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D AYR47_22110 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:pazo03010] D AYR47_15395 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D AYR47_13555 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D AYR47_03725 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D AYR47_03645 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D AYR47_03675 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D AYR47_09855 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D AYR47_03775 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D AYR47_03690 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D AYR47_11525 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D AYR47_03760 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D AYR47_03650 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D AYR47_03780 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D AYR47_03655 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D AYR47_03695 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D AYR47_02145 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D AYR47_00975 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D AYR47_03715 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D AYR47_09860 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D AYR47_03735 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D AYR47_11110 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D AYR47_03805 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D AYR47_03740 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D AYR47_03755 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D AYR47_03750 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D AYR47_03700 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D AYR47_03685 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D AYR47_03795 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D AYR47_09870 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D AYR47_03800 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D AYR47_03810 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D AYR47_11520 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D AYR47_03710 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D AYR47_03665 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D AYR47_03720 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D AYR47_03635 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D AYR47_03680 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D AYR47_00960 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D AYR47_27280 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D AYR47_01725 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D AYR47_03730 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D AYR47_03745 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D AYR47_03705 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D AYR47_10935 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D AYR47_01720 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D AYR47_06055 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D AYR47_03670 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D AYR47_09195 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AYR47_12850 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AYR47_30340 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D AYR47_06050 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D AYR47_07070 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D AYR47_27285 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D AYR47_16930 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_03880 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_10565 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_07650 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_01975 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_01335 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_10580 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_01960 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_01320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_16945 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_07665 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_03865 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_10585 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_01315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_01955 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_16950 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_07670 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_07675 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_03860 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:pazo00970] D AYR47_01965 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_07660 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_16940 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_27600 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_03870 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_10575 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_27590 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_01325 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_30490 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYR47_30515 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYR47_26510 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYR47_08045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYR47_30520 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYR47_11200 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AYR47_28200 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AYR47_16665 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AYR47_16640 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AYR47_27445 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AYR47_27450 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AYR47_23230 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D AYR47_10945 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AYR47_16470 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AYR47_27585 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AYR47_27595 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AYR47_16450 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AYR47_16460 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AYR47_16465 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYR47_16475 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYR47_14435 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYR47_03835 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYR47_16455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYR47_18085 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYR47_26495 tRNA-His K14226 tRNA-His; tRNA His D AYR47_26505 tRNA-His K14226 tRNA-His; tRNA His D AYR47_01970 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYR47_03875 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYR47_07655 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYR47_10570 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYR47_16935 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYR47_01330 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYR47_09835 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYR47_01310 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYR47_26500 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYR47_02180 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYR47_23030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYR47_09840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYR47_00440 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AYR47_11210 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AYR47_00880 tRNA-Met K14230 tRNA-Met; tRNA Met D AYR47_04150 tRNA-Met K14230 tRNA-Met; tRNA Met D AYR47_02175 tRNA-Met K14230 tRNA-Met; tRNA Met D AYR47_10815 tRNA-Met K14230 tRNA-Met; tRNA Met D AYR47_00885 tRNA-Met K14230 tRNA-Met; tRNA Met D AYR47_08745 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AYR47_11205 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AYR47_11215 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AYR47_27255 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AYR47_30525 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AYR47_14610 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AYR47_30080 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AYR47_25345 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AYR47_03830 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AYR47_08625 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AYR47_11290 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AYR47_03825 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AYR47_03840 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AYR47_16635 tRNA-Val K14237 tRNA-Val; tRNA Val D AYR47_27435 tRNA-Val K14237 tRNA-Val; tRNA Val D AYR47_27455 tRNA-Val K14237 tRNA-Val; tRNA Val D AYR47_16660 tRNA-Val K14237 tRNA-Val; tRNA Val D AYR47_27605 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AYR47_12660 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D AYR47_26625 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D AYR47_11615 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D AYR47_11610 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D AYR47_11620 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D AYR47_26195 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D AYR47_30540 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AYR47_16555 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AYR47_00510 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AYR47_07125 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AYR47_07120 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AYR47_27295 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AYR47_25510 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AYR47_26190 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AYR47_13090 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AYR47_07155 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D AYR47_12555 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AYR47_03140 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AYR47_11125 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AYR47_13350 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AYR47_09185 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AYR47_00865 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AYR47_01195 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AYR47_27275 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AYR47_27270 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AYR47_03885 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AYR47_11495 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:pazo03060] D AYR47_03660 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AYR47_03820 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AYR47_02185 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AYR47_01290 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AYR47_01285 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AYR47_01295 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AYR47_07060 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AYR47_00585 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AYR47_08835 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AYR47_00980 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AYR47_29650 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D AYR47_29720 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D AYR47_05070 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AYR47_09065 tatA; preprotein translocase subunit SecA K03116 tatA; sec-independent protein translocase protein TatA D AYR47_09060 tatB; Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D AYR47_09055 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D AYR47_07870 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D AYR47_12590 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D AYR47_26180 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D AYR47_11130 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D AYR47_25010 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:pazo04122] D AYR47_01255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AYR47_16890 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AYR47_05095 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AYR47_09725 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AYR47_14985 sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D AYR47_14570 response regulator SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D AYR47_25485 sulfur relay protein DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B D AYR47_25480 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D AYR47_25475 sulfurtransferase K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D AYR47_25490 sulfur relay protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D AYR47_25585 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D AYR47_12260 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D AYR47_30280 radical SAM protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D AYR47_12255 molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D AYR47_10980 molybdopterin-synthase adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D AYR47_29905 sulfurylase K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D AYR47_31595 hypothetical protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D AYR47_06795 hypothetical protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D AYR47_12250 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D AYR47_15940 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D AYR47_08875 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D AYR47_05040 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:pazo03018] D AYR47_05280 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D AYR47_30370 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D AYR47_12270 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D AYR47_13655 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AYR47_02140 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AYR47_04790 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D AYR47_02960 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D AYR47_09845 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AYR47_15810 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AYR47_08425 recombinase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AYR47_29040 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AYR47_05670 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D AYR47_02250 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AYR47_00830 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AYR47_09790 RNA chaperone Hfq K03666 hfq; host factor-I protein D AYR47_05730 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AYR47_23085 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D AYR47_02090 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:pazo03030] D AYR47_03005 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYR47_04315 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYR47_30295 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AYR47_03150 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AYR47_12565 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AYR47_07080 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AYR47_09875 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AYR47_31385 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AYR47_04135 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D AYR47_03610 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_02410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_31430 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_20065 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D AYR47_13625 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D AYR47_07470 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AYR47_04725 aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AYR47_29730 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:pazo03410] D AYR47_13080 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AYR47_14465 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D AYR47_08755 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D AYR47_03230 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D AYR47_05130 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AYR47_31275 3-methyladenine DNA glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D AYR47_07130 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AYR47_23965 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AYR47_18620 DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D AYR47_26245 exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AYR47_06105 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AYR47_07470 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AYR47_00900 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AYR47_04725 aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AYR47_29730 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:pazo03420] D AYR47_15085 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D AYR47_24460 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D AYR47_03620 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A D AYR47_27610 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D AYR47_18075 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D AYR47_06545 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AYR47_07470 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AYR47_04725 aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AYR47_29730 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AYR47_22110 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:pazo03430] D AYR47_13105 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D AYR47_09780 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D AYR47_06545 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AYR47_00615 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D AYR47_01155 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D AYR47_03435 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D AYR47_00900 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AYR47_03610 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_02410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_31430 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_07080 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AYR47_03150 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AYR47_30295 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AYR47_03005 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYR47_04315 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYR47_12565 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AYR47_04725 aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AYR47_29730 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:pazo03440] D AYR47_00900 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AYR47_03610 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_02410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_31430 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_07085 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D AYR47_12605 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D AYR47_29580 recR; recombination protein RecR K06187 recR; recombination protein RecR D AYR47_13150 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D AYR47_07470 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AYR47_00495 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D AYR47_00500 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AYR47_06175 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D AYR47_01945 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D AYR47_01950 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D AYR47_01940 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D AYR47_07080 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AYR47_03150 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AYR47_30295 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AYR47_03005 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYR47_04315 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYR47_12565 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] C 03450 Non-homologous end-joining [PATH:pazo03450] D AYR47_21755 DNA repair protein K10979 ku; DNA end-binding protein Ku D AYR47_21750 ligD; ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:pazo03250] D AYR47_29370 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:pazo02010] D AYR47_16130 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D AYR47_08085 ABC transporter permease K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D AYR47_08090 sulfate ABC transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D AYR47_08095 sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein D AYR47_08100 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D AYR47_08345 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D AYR47_05485 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D AYR47_08335 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein D AYR47_08340 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D AYR47_21505 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_20605 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_05465 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_30960 alkanesulfonate transporter substrate-binding subunit K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_25060 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_25065 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_27185 alkanesulfonate transporter substrate-binding subunit K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_19355 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_27975 alkanesulfonate transporter K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_25170 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_25050 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_17835 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_07715 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_21500 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_05455 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D AYR47_19405 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_07725 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_17830 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_25045 sulfonate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_21495 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_05450 ssuB; aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_19410 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_07720 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_25040 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_14710 molybdenum ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D AYR47_22885 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D AYR47_22890 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein D AYR47_22895 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D AYR47_05555 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D AYR47_09830 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D AYR47_05225 phosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D AYR47_05550 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D AYR47_09825 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D AYR47_05230 phosphonate ABC transporter permease K02011 afuB; iron(III) transport system permease protein D AYR47_13015 iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D AYR47_05235 sulfate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D AYR47_16485 ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_22050 spermidine/putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_06475 ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_05410 ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_05415 spermidine/putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_19635 ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_24265 spermidine/putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_27220 spermidine/putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_18650 ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_05395 spermidine/putrescine ABC transporter permease K11074 potI; putrescine transport system permease protein D AYR47_05400 spermidine/putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein D AYR47_05405 transporter K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D AYR47_07200 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_20410 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_19790 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_16215 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_30965 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_18250 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_04520 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_04560 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_08950 histidine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_08990 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_04565 choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D AYR47_08955 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D AYR47_04570 choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D AYR47_08960 hypothetical protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D AYR47_11395 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D AYR47_11390 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D AYR47_11400 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D AYR47_11385 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D AYR47_21050 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AYR47_31090 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AYR47_21065 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D AYR47_19060 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D AYR47_21060 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D AYR47_21055 sugar ABC transporter permease K10229 smoG; polyol transport system permease protein D AYR47_11765 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein D AYR47_07545 ABC transporter permease K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D AYR47_11760 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D AYR47_07555 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D AYR47_11755 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D AYR47_11770 anti-anti-sigma factor K07122 mlaB; phospholipid transport system transporter-binding protein D AYR47_07550 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D AYR47_11750 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D AYR47_31105 sugar ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D AYR47_31100 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D AYR47_31095 sugar ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D AYR47_26665 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D AYR47_27355 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D AYR47_22265 ABC transporter K10439 rbsB; ribose transport system substrate-binding protein D AYR47_26655 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D AYR47_27345 ABC transporter permease K10440 rbsC; ribose transport system permease protein D AYR47_22260 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D AYR47_22255 D-ribose transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D AYR47_27350 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D AYR47_26660 ribonucleotide-diphosphate reductase subunit alpha K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D AYR47_27330 ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D AYR47_30220 sugar ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein D AYR47_18595 sugar ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein D AYR47_30210 arabinose ABC transporter permease K10538 araH; L-arabinose transport system permease protein D AYR47_18605 arabinose ABC transporter permease K10538 araH; L-arabinose transport system permease protein D AYR47_30215 araG; L-arabinose transporter ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D AYR47_18600 araG; L-arabinose transporter ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D AYR47_18430 sugar ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D AYR47_18420 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D AYR47_18425 D-xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D AYR47_24395 sugar ABC transporter substrate-binding protein K17205 xltC; putative xylitol transport system substrate-binding protein D AYR47_18465 sugar ABC transporter permease K17206 xltB; putative xylitol transport system permease protein D AYR47_18470 D-ribose transporter ATP-binding protein K17207 xltA; putative xylitol transport system ATP-binding protein D AYR47_19740 rhizopine-binding protein K17213 K17213; inositol transport system substrate-binding protein D AYR47_23715 rhizopine-binding protein K17213 K17213; inositol transport system substrate-binding protein D AYR47_18665 rhizopine-binding protein K17213 K17213; inositol transport system substrate-binding protein D AYR47_19750 ABC transporter K17214 K17214; inositol transport system permease protein D AYR47_19745 D-ribose transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein D AYR47_25235 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein D AYR47_25250 ABC transporter permease K17322 glpP; glycerol transport system permease protein D AYR47_25245 sugar ABC transporter permease K17323 glpQ; glycerol transport system permease protein D AYR47_25260 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D AYR47_25255 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D AYR47_06395 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AYR47_26250 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D AYR47_23080 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AYR47_06390 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D AYR47_23075 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D AYR47_06385 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D AYR47_23070 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D AYR47_06380 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AYR47_23065 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AYR47_16045 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D AYR47_16050 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D AYR47_16040 phosphonate/organophosphate ester transporter subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D AYR47_12085 amino acid ABC transporter substrate-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D AYR47_17540 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein D AYR47_13770 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein D AYR47_17545 amino acid ABC transporter permease K10016 hisQ; histidine transport system permease protein D AYR47_13775 amino acid ABC transporter permease K10016 hisQ; histidine transport system permease protein D AYR47_17535 amino acid transporter K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D AYR47_13760 amino acid transporter K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D AYR47_17550 ABC transporter substrate-binding protein K10014 hisJ; histidine transport system substrate-binding protein D AYR47_13780 ABC transporter substrate-binding protein K10014 hisJ; histidine transport system substrate-binding protein D AYR47_12985 ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D AYR47_12975 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D AYR47_12980 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D AYR47_12970 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D AYR47_02350 ABC transporter substrate-binding protein K10018 occT; octopine/nopaline transport system substrate-binding protein D AYR47_02330 ABC transporter permease K10019 occM; octopine/nopaline transport system permease protein D AYR47_02335 ABC transporter permease K10020 occQ; octopine/nopaline transport system permease protein D AYR47_01480 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D AYR47_12280 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D AYR47_12285 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D AYR47_12290 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D AYR47_08280 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D AYR47_05340 ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D AYR47_08275 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D AYR47_08270 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D AYR47_18365 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D AYR47_30620 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D AYR47_30610 amino acid ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein D AYR47_30615 ABC transporter K10024 aotQ; arginine/ornithine transport system permease protein D AYR47_30600 amino acid transporter K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D AYR47_08700 amino acid ABC transporter K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein D AYR47_08695 ABC transporter permease K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D AYR47_08690 ABC transporter permease K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D AYR47_08705 amino acid transporter K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1] D AYR47_26595 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_09945 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_26065 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_25140 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_13975 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_26600 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D AYR47_09950 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D AYR47_25160 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D AYR47_26075 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D AYR47_13970 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D AYR47_25155 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D AYR47_26070 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D AYR47_26605 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D AYR47_13965 livM; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D AYR47_09955 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D AYR47_26610 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_09960 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_25150 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_26080 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_13960 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_25145 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_26060 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_26615 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_13955 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_09965 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_08175 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D AYR47_08245 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D AYR47_07415 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D AYR47_16845 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D AYR47_08235 ABC transporter permease K02072 metI; D-methionine transport system permease protein D AYR47_07420 metal ABC transporter permease K02072 metI; D-methionine transport system permease protein D AYR47_16840 metal ABC transporter permease K02072 metI; D-methionine transport system permease protein D AYR47_08240 ABC transporter K02071 metN; D-methionine transport system ATP-binding protein D AYR47_07425 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D AYR47_10130 branched-chain amino acid ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D AYR47_10125 urea ABC transporter permease K11960 urtB; urea transport system permease protein D AYR47_10120 urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D AYR47_10115 urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D AYR47_10110 urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D AYR47_11440 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AYR47_11450 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AYR47_11455 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AYR47_06060 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AYR47_11435 peptide ABC transporter permease K12369 dppB; dipeptide transport system permease protein D AYR47_11430 peptide transporter K12370 dppC; dipeptide transport system permease protein D AYR47_11425 dppD; peptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D AYR47_11420 peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D AYR47_20040 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D AYR47_20045 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D AYR47_24285 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D AYR47_20035 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein D AYR47_24290 peptide ABC transporter permease K13894 yejB; microcin C transport system permease protein D AYR47_20030 ABC transporter permease K13895 yejE; microcin C transport system permease protein D AYR47_24295 ABC transporter permease K13895 yejE; microcin C transport system permease protein D AYR47_20025 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D AYR47_24300 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D AYR47_27205 fecB; iron-dicitrate transporter substrate-binding subunit K23181 fecB; ferric citrate transport system substrate-binding protein D AYR47_27195 fecD; iron-dicitrate transporter subunit FecD K23182 fecD; ferric citrate transport system permease protein D AYR47_27200 iron ABC transporter K23183 fecC; ferric citrate transport system permease protein D AYR47_27190 iron ABC transporter K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18] D AYR47_03455 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D AYR47_07455 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D AYR47_16780 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D AYR47_07440 hypothetical protein K09816 znuB; zinc transport system permease protein D AYR47_16770 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein D AYR47_16775 manganese ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D AYR47_15115 cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein D AYR47_15125 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein D AYR47_15120 ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D AYR47_15980 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D AYR47_15975 heme ABC transporter permease K02195 ccmC; heme exporter protein C D AYR47_15970 heme transporter K02194 ccmB; heme exporter protein B D AYR47_15965 heme ABC transporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D AYR47_12575 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D AYR47_12580 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D AYR47_11725 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D AYR47_05060 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D AYR47_05065 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AYR47_21955 ABC transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D AYR47_21950 ABC transporter K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D AYR47_09595 lipid ABC transporter permease/ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D AYR47_29375 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D AYR47_02860 peptidase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D AYR47_22080 peptidase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D AYR47_26575 macrolide ABC transporter ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D AYR47_19260 macrolide transporter K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D AYR47_19215 cyclic peptide transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein D AYR47_11480 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:pazo02060] D AYR47_01055 PTS N-acetyl-D-glucosamine transporter K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D AYR47_01105 trehalose permease IIC protein K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D AYR47_24155 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AYR47_11340 PTS fructose transporter subunit IIA K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D AYR47_01050 PTS N-acetyl-D-glucosamine transporter K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D AYR47_01090 PTS mannose transporter subunit IIC K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D AYR47_11345 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D AYR47_05275 phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D AYR47_11700 phosphocarrier protein HPr K08485 ptsO; phosphocarrier protein NPr D AYR47_11710 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:pazo03070] D AYR47_09650 channel protein TolC K12340 tolC; outer membrane protein D AYR47_26045 hypothetical protein K12340 tolC; outer membrane protein D AYR47_10845 type III secretion protein K04056 yscO; type III secretion protein O D AYR47_29820 EscC/YscC/HrcC family type III secretion system outer membrane ring protein K03219 yscC; type III secretion protein C D AYR47_10890 EscC/YscC/HrcC family type III secretion system outer membrane ring protein K03219 yscC; type III secretion protein C D AYR47_10825 SepL/TyeA/HrpJ family type III secretion system gatekeeper K04058 yscW; type III secretion protein W D AYR47_25950 EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein K03222 yscJ; type III secretion protein J D AYR47_10910 EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein K03222 yscJ; type III secretion protein J D AYR47_25920 ssaR; EscR/YscR/HrcR family type III secretion system export apparatus protein K03226 yscR; type III secretion protein R D AYR47_10860 ssaR; EscR/YscR/HrcR family type III secretion system export apparatus protein K03226 yscR; type III secretion protein R D AYR47_10865 EscS/YscS/HrcS family type III secretion system export apparatus protein K03227 yscS; type III secretion protein S D AYR47_25915 EscS/YscS/HrcS family type III secretion system export apparatus protein K03227 yscS; type III secretion protein S D AYR47_25910 EscT/YscT/HrcT family type III secretion system export apparatus protein K03228 yscT; type III secretion protein T D AYR47_10870 EscT/YscT/HrcT family type III secretion system export apparatus protein K03228 yscT; type III secretion protein T D AYR47_25905 translocation protein in type III secretion system, RhcU K03229 yscU; type III secretion protein U D AYR47_10875 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K03229 yscU; type III secretion protein U D AYR47_10830 EscV/YscV/HrcV family type III secretion system export apparatus protein K03230 yscV; type III secretion protein V D AYR47_25985 EscV/YscV/HrcV family type III secretion system export apparatus protein K03230 yscV; type III secretion protein V D AYR47_25935 fliI; EscN/YscN/HrcN family type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D AYR47_10840 fliI; EscN/YscN/HrcN family type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D AYR47_25925 type III secretion protein K03225 yscQ; type III secretion protein Q D AYR47_10855 type III secretion protein K03225 yscQ; type III secretion protein Q D AYR47_25940 type III secretion protein K03223 yscL; type III secretion protein L D AYR47_10905 type III secretion protein K03223 yscL; type III secretion protein L D AYR47_18820 type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D AYR47_20780 hypothetical protein K02453 gspD; general secretion pathway protein D D AYR47_27115 type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D AYR47_18790 general secretion pathway protein GspC K02452 gspC; general secretion pathway protein C D AYR47_18830 type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D AYR47_20750 hypothetical protein K02455 gspF; general secretion pathway protein F D AYR47_27160 type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D AYR47_18800 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D AYR47_20745 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D AYR47_20785 general secretion pathway protein GspG K02456 gspG; general secretion pathway protein G D AYR47_20790 type II secretion system protein G K02456 gspG; general secretion pathway protein G D AYR47_27155 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D AYR47_18785 type II secretion system protein GspH K02457 gspH; general secretion pathway protein H D AYR47_27150 general secretion pathway protein GspH K02457 gspH; general secretion pathway protein H D AYR47_18795 type II secretion system protein GspI K02458 gspI; general secretion pathway protein I D AYR47_27145 general secretion pathway protein GspI K02458 gspI; general secretion pathway protein I D AYR47_18780 type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D AYR47_27140 general secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J D AYR47_18805 HxcX atypical pseudopilin K02460 gspK; general secretion pathway protein K D AYR47_27135 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D AYR47_18810 type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D AYR47_27130 general secretion pathway protein GspL K02461 gspL; general secretion pathway protein L D AYR47_18815 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D AYR47_27125 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D AYR47_05515 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D AYR47_18825 type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D AYR47_20755 general secretion pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D AYR47_27165 type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D AYR47_01290 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AYR47_01285 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AYR47_03820 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AYR47_02185 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AYR47_03660 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AYR47_01295 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AYR47_07060 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AYR47_00585 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AYR47_05070 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AYR47_08835 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AYR47_00980 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AYR47_09065 tatA; preprotein translocase subunit SecA K03116 tatA; sec-independent protein translocase protein TatA D AYR47_09060 tatB; Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D AYR47_09055 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D AYR47_17225 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D AYR47_18115 type VI secretion protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D AYR47_25720 type VI secretion protein ImpA K11904 vgrG; type VI secretion system secreted protein VgrG D AYR47_06290 type VI secretion protein ImpA K11904 vgrG; type VI secretion system secreted protein VgrG D AYR47_24735 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D AYR47_09460 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D AYR47_18180 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D AYR47_18125 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_25750 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_06265 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_19090 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_24250 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_06240 type VI secretion protein K11906 vasD; type VI secretion system protein VasD D AYR47_24195 type VI secretion protein K11906 vasD; type VI secretion system protein VasD D AYR47_25700 type VI secretion protein K11891 impL; type VI secretion system protein ImpL D AYR47_06225 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D AYR47_24720 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL D AYR47_18195 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL D AYR47_18130 hypothetical protein K11892 impK; type VI secretion system protein ImpK D AYR47_25705 hypothetical protein K11892 impK; type VI secretion system protein ImpK D AYR47_06230 hypothetical protein K11892 impK; type VI secretion system protein ImpK D AYR47_24730 hypothetical protein K11892 impK; type VI secretion system protein ImpK D AYR47_24185 hypothetical protein K11892 impK; type VI secretion system protein ImpK D AYR47_25730 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D AYR47_06285 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D AYR47_24215 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D AYR47_06210 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D AYR47_25715 phosphopeptide-binding protein K11913 fha1; type VI secretion system protein D AYR47_06245 type VI secretion protein K11913 fha1; type VI secretion system protein D AYR47_24175 protein phosphatase K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16] D AYR47_06215 serine/threonine protein phosphatase K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16] B B 09132 Signal transduction C 02020 Two-component system [PATH:pazo02020] D AYR47_06355 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AYR47_06350 two-component system response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D AYR47_16550 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D AYR47_11355 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D AYR47_06395 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AYR47_26250 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D AYR47_23080 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AYR47_30395 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AYR47_30400 two-component system response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D AYR47_29900 multidrug transporter K07790 pagO; putative membrane protein PagO D AYR47_08560 acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D AYR47_08370 ATPase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AYR47_08365 two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D AYR47_31255 two-component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D AYR47_30415 histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D AYR47_30420 two-component system response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D AYR47_00820 two-component system response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D AYR47_14550 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D AYR47_04350 two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D AYR47_04355 two-component system response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D AYR47_21090 efflux transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D AYR47_21095 multidrug transporter subunit MdtB K07788 mdtB; multidrug efflux pump D AYR47_21100 acriflavine resistance protein B K07789 mdtC; multidrug efflux pump D AYR47_12060 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_27410 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_10710 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_15130 ATPase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_00010 ATPase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_06830 ATPase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_12065 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_27405 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_10715 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_15135 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_00015 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_08115 transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_06835 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_19690 efflux transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D AYR47_06815 efflux transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D AYR47_31610 cation transporter K07787 cusA; copper/silver efflux system protein D AYR47_19695 cation transporter K07787 cusA; copper/silver efflux system protein D AYR47_06810 cation transporter K07787 cusA; copper/silver efflux system protein D AYR47_01400 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D AYR47_28590 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D AYR47_01405 XRE family transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D AYR47_28595 two-component system response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D AYR47_28940 branched-chain alpha-keto acid dehydrogenase subunit E2 K02406 fliC; flagellin D AYR47_28780 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D AYR47_28755 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D AYR47_09735 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AYR47_15570 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D AYR47_15575 two-component system response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D AYR47_15555 ATPase K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D AYR47_15560 potassium-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D AYR47_15565 ATPase K01548 kdpC; potassium-transporting ATPase KdpC subunit D AYR47_15550 K+-transporting ATPase subunit F K01545 kdpF; potassium-transporting ATPase KdpF subunit D AYR47_14505 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D AYR47_14500 two-component system response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D AYR47_14480 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein D AYR47_14485 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D AYR47_14490 tricarboxylic transporter K07795 tctC; putative tricarboxylic transport membrane protein D AYR47_07400 cytochrome B K02259 COX15; heme a synthase [EC:1.17.99.9] D AYR47_07075 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D AYR47_00890 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D AYR47_23880 ATPase K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D AYR47_23885 two-component system response regulator K18073 parR; two-component system, OmpR family, response regulator ParR D AYR47_00545 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D AYR47_22315 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D AYR47_25400 histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D AYR47_25405 two-component system response regulator K19610 pfeR; two-component system, OmpR family, response regulator PfeR D AYR47_05850 two-component system response regulator K08083 algR; two-component system, LytTR family, response regulator AlgR D AYR47_12230 GDP-mannose dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D AYR47_26955 hybrid sensor histidine kinase/response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D AYR47_26965 hybrid sensor histidine kinase/response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D AYR47_12375 two-component system response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D AYR47_09140 LuxR family transcriptional regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D AYR47_25410 hybrid sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D AYR47_18070 two-component system response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D AYR47_17390 LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D AYR47_15305 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D AYR47_28340 carbon storage regulator K03563 csrA; carbon storage regulator D AYR47_27380 carbon storage regulator K03563 csrA; carbon storage regulator D AYR47_30530 carbon storage regulator K03563 csrA; carbon storage regulator D AYR47_27690 hybrid sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D AYR47_15865 hybrid sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D AYR47_17895 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_13070 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_27695 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_27745 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_15870 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_23790 ampC; class C beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D AYR47_10365 PAS domain-containing sensor histidine kinase K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3] D AYR47_10380 LuxR family transcriptional regulator K27077 pprB; two-component system, NarL family, response regulator PprB D AYR47_26365 spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AYR47_26345 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AYR47_26360 spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AYR47_26370 spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AYR47_26375 spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AYR47_27710 fimbrial protein K07346 fimC; fimbrial chaperone protein D AYR47_26355 molecular chaperone K07346 fimC; fimbrial chaperone protein D AYR47_26980 pilus assembly protein K07346 fimC; fimbrial chaperone protein D AYR47_09120 o-succinylbenzoate--CoA ligase K07347 fimD; outer membrane usher protein D AYR47_27725 fimbrial protein K07347 fimD; outer membrane usher protein D AYR47_26985 fimbrial protein K07347 fimD; outer membrane usher protein D AYR47_26350 fimbrial assembly protein K07347 fimD; outer membrane usher protein D AYR47_10425 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA D AYR47_10420 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D AYR47_25980 type II and III secretion system protein RhcC2 K02280 cpaC; pilus assembly protein CpaC D AYR47_10415 secretin K02280 cpaC; pilus assembly protein CpaC D AYR47_10410 pilus assembly protein K02282 cpaE; pilus assembly protein CpaE D AYR47_10405 ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D AYR47_10400 type II secretion system protein F K12510 tadB; tight adherence protein B D AYR47_10395 type II secretion system protein F K12511 tadC; tight adherence protein C D AYR47_10360 hypothetical protein K27080 tadG; tight adherence protein G D AYR47_13545 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D AYR47_08855 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AYR47_08850 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D AYR47_08870 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_17780 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_05425 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_05435 gamma-glutamylputrescine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_14840 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_19630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_02085 Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D AYR47_10670 Short chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter D AYR47_03370 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_30110 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_22515 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_17715 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_24085 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_10455 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_08485 ATPase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D AYR47_00680 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D AYR47_08480 Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D AYR47_00685 C4-dicarboxylate ABC transporter K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D AYR47_23970 C4-dicarboxylate ABC transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D AYR47_24650 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D AYR47_18230 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D AYR47_30385 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D AYR47_19155 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D AYR47_16820 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D AYR47_11720 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D AYR47_11280 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D AYR47_07510 PAS domain-containing sensor histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3] D AYR47_07515 two-component system response regulator K11384 algB; two-component system, NtrC family, response regulator AlgB D AYR47_22565 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AYR47_30455 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AYR47_07680 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_21670 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_17300 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_17310 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_22425 histidine kinase K03406 mcp; methyl-accepting chemotaxis protein D AYR47_23290 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_23410 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_24545 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_29435 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_23615 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_09040 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_09045 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_00600 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_09430 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_00765 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_18490 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_30735 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_30790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_19170 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_01760 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_10730 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_19760 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_02360 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_11320 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_16435 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_20860 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_29455 chemotaxis protein K03776 aer; aerotaxis receptor D AYR47_23540 chemotaxis protein K03776 aer; aerotaxis receptor D AYR47_12090 chemotaxis protein K03776 aer; aerotaxis receptor D AYR47_28735 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYR47_28740 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYR47_28765 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYR47_28775 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYR47_22560 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AYR47_28760 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AYR47_12105 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYR47_30460 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYR47_28690 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYR47_04915 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D AYR47_04920 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D AYR47_04910 hybrid sensor histidine kinase/response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D AYR47_04930 pilus assembly protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D AYR47_04925 two-component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D AYR47_13310 chemotaxis protein CheR K13486 wspC; chemotaxis protein methyltransferase WspC D AYR47_13300 chemotaxis protein K13487 wspA; methyl-accepting chemotaxis protein WspA D AYR47_13305 chemotaxis protein CheW K13488 wspB; chemotaxis-related protein WspB D AYR47_13315 chemotaxis protein CheW K13489 wspD; chemotaxis-related protein WspD D AYR47_13320 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D AYR47_13325 chemotaxis response regulator protein-glutamate methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D AYR47_13330 diguanylate cyclase response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D AYR47_01450 histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D AYR47_22245 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK D AYR47_22550 hypothetical protein K13589 cpdR; two-component system, cell cycle response regulator CpdR D AYR47_23800 C4-dicarboxylate ABC transporter K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D AYR47_23795 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D AYR47_28915 AAA family ATPase K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D AYR47_28910 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D AYR47_28905 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D AYR47_12965 histidine kinase K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3] D AYR47_12960 Fis family transcriptional regulator K17061 aauR; two-component system, response regulator AauR D AYR47_12970 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D AYR47_12975 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D AYR47_12980 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D AYR47_12985 ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D AYR47_27360 L-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D AYR47_03960 transcriptional regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYR47_08110 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYR47_14910 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYR47_25025 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D AYR47_11470 histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D AYR47_11475 two-component system response regulator K15012 regA; two-component system, response regulator RegA D AYR47_11530 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D AYR47_11535 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D AYR47_11540 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D AYR47_01435 cytochrome C K08738 CYC; cytochrome c D AYR47_14815 calcium channel protein K08738 CYC; cytochrome c D AYR47_29465 cytochrome C oxidase Cbb3 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D AYR47_22655 cytochrome C oxidase Cbb3 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D AYR47_29510 cytochrome C oxidase Cbb3 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D AYR47_29470 cytochrome C oxidase Cbb3 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D AYR47_29515 cytochrome C oxidase Cbb3 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D AYR47_29475 cytochrome-c oxidase K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D AYR47_29520 cytochrome oxidase K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D AYR47_29480 cytochrome C oxidase Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D AYR47_29525 cytochrome C oxidase Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D AYR47_02800 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D AYR47_02795 ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D AYR47_09650 channel protein TolC K12340 tolC; outer membrane protein D AYR47_26045 hypothetical protein K12340 tolC; outer membrane protein D AYR47_19510 capsular biosynthesis protein K01991 wza; polysaccharide biosynthesis/export protein D AYR47_19430 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D AYR47_25360 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D AYR47_19435 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D AYR47_20020 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_30980 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_12500 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_04320 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_16970 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_21485 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_25275 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_16655 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_24905 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_18340 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_01350 RNA polymerase subunit sigma-24 K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_02655 transcriptional regulator K07165 fecR; transmembrane sensor D AYR47_02875 siderophore-interacting protein K07165 fecR; transmembrane sensor D AYR47_21490 sugar ABC transporter substrate-binding protein K07165 fecR; transmembrane sensor D AYR47_17195 peptide ABC transporter substrate-binding protein K07165 fecR; transmembrane sensor D AYR47_14270 iron dicitrate transport regulator FecR K07165 fecR; transmembrane sensor D AYR47_25270 iron dicitrate transport regulator FecR K07165 fecR; transmembrane sensor D AYR47_30975 sensor protein K07165 fecR; transmembrane sensor D AYR47_20015 iron dicitrate transport regulator FecR K07165 fecR; transmembrane sensor D AYR47_18335 histidine kinase K07165 fecR; transmembrane sensor D AYR47_01345 iron dicitrate transport regulator FecR K07165 fecR; transmembrane sensor D AYR47_04325 amino acid ABC transporter substrate-binding protein K07165 fecR; transmembrane sensor D AYR47_24900 iron dicitrate transport regulator FecR K07165 fecR; transmembrane sensor D AYR47_12495 hypothetical protein K07165 fecR; transmembrane sensor D AYR47_12525 sugar ABC transporter substrate-binding protein K07165 fecR; transmembrane sensor D AYR47_16975 iron dicitrate transport regulator FecR K07165 fecR; transmembrane sensor D AYR47_17025 siderophore-interacting protein K07165 fecR; transmembrane sensor D AYR47_30015 hypothetical protein K07165 fecR; transmembrane sensor D AYR47_00745 glycerol-3-phosphate ABC transporter substrate-binding protein K07165 fecR; transmembrane sensor D AYR47_05165 iron dicitrate transport regulator FecR K07165 fecR; transmembrane sensor D AYR47_20345 peptide ABC transporter substrate-binding protein K07165 fecR; transmembrane sensor D AYR47_03425 transmembrane sensor protein K07165 fecR; transmembrane sensor D AYR47_16650 histidine kinase K07165 fecR; transmembrane sensor D AYR47_18775 iron dicitrate transport regulator FecR K07165 fecR; transmembrane sensor D AYR47_15850 hybrid sensor histidine kinase/response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D AYR47_17375 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D AYR47_28860 histidine kinase K20976 hptB; histidine phosphotransfer protein HptB D AYR47_28865 fused response regulator/phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D AYR47_28870 anti-anti-sigma factor K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D AYR47_30470 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:pazo04148] D AYR47_11380 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AYR47_11530 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:pazo02024] D AYR47_09790 RNA chaperone Hfq K03666 hfq; host factor-I protein D AYR47_03985 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AYR47_03980 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D AYR47_04605 MFS transporter K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-] D AYR47_18045 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AYR47_15700 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AYR47_15795 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AYR47_01400 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D AYR47_28590 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D AYR47_01405 XRE family transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D AYR47_28595 two-component system response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D AYR47_15575 two-component system response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D AYR47_15305 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D AYR47_04015 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AYR47_12695 signal peptide prediction K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AYR47_20485 polyamine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AYR47_19105 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AYR47_13280 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AYR47_24950 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AYR47_16755 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AYR47_16740 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AYR47_04005 polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AYR47_20495 hypothetical protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AYR47_19125 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AYR47_13265 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AYR47_24940 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AYR47_24945 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AYR47_16745 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D AYR47_04010 polyamine ABC transporter substrate-binding protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D AYR47_20490 polyamine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D AYR47_19130 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D AYR47_13270 spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D AYR47_16735 spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D AYR47_04020 spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D AYR47_20480 spermidine/putrescine ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D AYR47_13275 polyamine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D AYR47_24935 iron ABC transporter substrate-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D AYR47_26595 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_09945 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_26065 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_25140 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_13975 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_26600 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D AYR47_09950 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D AYR47_25160 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D AYR47_26075 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D AYR47_13970 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D AYR47_25155 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D AYR47_26070 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D AYR47_26605 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D AYR47_13965 livM; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D AYR47_09955 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D AYR47_26610 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_09960 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_25150 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_26080 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_13960 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_25145 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_26060 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_26615 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_13955 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_09965 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_01525 autoinducer-binding protein K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D AYR47_31025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_31030 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_24080 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_16375 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_03960 transcriptional regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYR47_08110 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYR47_14910 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYR47_07450 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D AYR47_26760 helix-turn-helix transcriptional regulator K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons D AYR47_03465 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D AYR47_03500 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D AYR47_14335 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AYR47_19020 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AYR47_19025 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AYR47_26765 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D AYR47_14115 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D AYR47_21310 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYR47_21885 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYR47_18020 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYR47_20620 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYR47_15335 diguanylate cyclase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYR47_27045 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYR47_19905 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYR47_21305 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYR47_21880 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYR47_18025 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYR47_20625 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYR47_15315 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYR47_27040 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYR47_19910 peptide ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYR47_21875 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYR47_18030 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYR47_20630 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYR47_15320 nickel ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYR47_27035 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYR47_19915 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYR47_21300 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYR47_21295 microcin ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYR47_21870 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYR47_18035 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYR47_20635 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYR47_15325 methionine ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYR47_27030 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYR47_19920 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYR47_15330 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D AYR47_07060 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AYR47_03820 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AYR47_02185 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AYR47_03660 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AYR47_01295 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AYR47_00585 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AYR47_05070 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AYR47_08835 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AYR47_00980 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa [PATH:pazo02025] D AYR47_04915 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D AYR47_04920 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D AYR47_04910 hybrid sensor histidine kinase/response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D AYR47_04925 two-component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D AYR47_04930 pilus assembly protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D AYR47_24930 metallophosphatase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D AYR47_09680 serine/threonine protein phosphatase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D AYR47_03960 transcriptional regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYR47_08110 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYR47_14910 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYR47_28915 AAA family ATPase K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D AYR47_04605 MFS transporter K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-] D AYR47_03985 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AYR47_03980 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D AYR47_25410 hybrid sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D AYR47_03075 hybrid sensor histidine kinase/response regulator K20971 ladS; two-component system, sensor histidine kinase LadS D AYR47_10235 hybrid sensor histidine kinase/response regulator K20972 retS; two-component system, sensor histidine kinase RetS D AYR47_18070 two-component system response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D AYR47_17390 LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D AYR47_28340 carbon storage regulator K03563 csrA; carbon storage regulator D AYR47_27380 carbon storage regulator K03563 csrA; carbon storage regulator D AYR47_30530 carbon storage regulator K03563 csrA; carbon storage regulator D AYR47_15850 hybrid sensor histidine kinase/response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D AYR47_17375 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D AYR47_28860 histidine kinase K20976 hptB; histidine phosphotransfer protein HptB D AYR47_28865 fused response regulator/phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D AYR47_28870 anti-anti-sigma factor K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D AYR47_30470 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D AYR47_28780 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D AYR47_06210 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D AYR47_24175 protein phosphatase K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16] D AYR47_06215 serine/threonine protein phosphatase K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16] D AYR47_25695 type VI secretion system protein ImpM K11890 impM; type VI secretion system protein ImpM D AYR47_06220 type VI secretion system protein ImpM K11890 impM; type VI secretion system protein ImpM D AYR47_25700 type VI secretion protein K11891 impL; type VI secretion system protein ImpL D AYR47_06225 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D AYR47_24720 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL D AYR47_18195 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL D AYR47_18135 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D AYR47_25710 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D AYR47_06235 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D AYR47_24190 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D AYR47_25715 phosphopeptide-binding protein K11913 fha1; type VI secretion system protein D AYR47_06245 type VI secretion protein K11913 fha1; type VI secretion system protein D AYR47_25765 type VI secretion protein ImpA K11902 impA; type VI secretion system protein ImpA D AYR47_06250 type VI secretion protein ImpA K11902 impA; type VI secretion system protein ImpA D AYR47_25760 hypothetical protein K11901 impB; type VI secretion system protein ImpB D AYR47_06255 hypothetical protein K11901 impB; type VI secretion system protein ImpB D AYR47_18165 type VI secretion protein K11901 impB; type VI secretion system protein ImpB D AYR47_24240 type VI secretion protein K11901 impB; type VI secretion system protein ImpB D AYR47_25755 EvpB family type VI secretion protein K11900 impC; type VI secretion system protein ImpC D AYR47_18160 type VI secretion protein K11900 impC; type VI secretion system protein ImpC D AYR47_24235 type VI secretion protein K11900 impC; type VI secretion system protein ImpC D AYR47_18125 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_25750 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_06265 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_19090 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_24250 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_18145 type VI secretion protein K11895 impH; type VI secretion system protein ImpH D AYR47_25735 type VI secretion protein K11895 impH; type VI secretion system protein ImpH D AYR47_06280 type VI secretion protein K11895 impH; type VI secretion system protein ImpH D AYR47_24220 type VI secretion protein K11895 impH; type VI secretion system protein ImpH D AYR47_25730 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D AYR47_06285 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D AYR47_24215 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D AYR47_13300 chemotaxis protein K13487 wspA; methyl-accepting chemotaxis protein WspA D AYR47_13320 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D AYR47_13305 chemotaxis protein CheW K13488 wspB; chemotaxis-related protein WspB D AYR47_13315 chemotaxis protein CheW K13489 wspD; chemotaxis-related protein WspD D AYR47_13325 chemotaxis response regulator protein-glutamate methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D AYR47_13330 diguanylate cyclase response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D AYR47_01930 diguanylate cyclase K21021 tpbB; diguanylate cyclase [EC:2.7.7.65] D AYR47_25310 diguanylate cyclase K21021 tpbB; diguanylate cyclase [EC:2.7.7.65] D AYR47_21110 histidine kinase K21023 mucR; diguanylate cyclase [EC:2.7.7.65] D AYR47_31150 diguanylate cyclase K21024 bifA; c-di-GMP phosphodiesterase [EC:3.1.4.52] D AYR47_17090 undecaprenyl-phosphate glucose phosphotransferase K20997 pslA; polysaccharide biosynthesis protein PslA D AYR47_12175 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D AYR47_17085 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D AYR47_17080 glycosyl transferase K25205 pslC; polysaccharide biosynthesis protein PslC D AYR47_17075 sugar ABC transporter substrate-binding protein K20987 pslD; polysaccharide biosynthesis/export protein PslD D AYR47_17070 lipopolysaccharide biosynthesis protein K20998 pslE; polysaccharide biosynthesis protein PslE D AYR47_17065 glycosyl transferase family 1 K20999 pslF; polysaccharide biosynthesis protein PslF D AYR47_17060 beta-xylosidase K21000 pslG; polysaccharide biosynthesis protein PslG D AYR47_17055 glycosyl transferase K21001 pslH; polysaccharide biosynthesis protein PslH D AYR47_17050 glycosyl transferase family 1 K21002 pslI; polysaccharide biosynthesis protein PslI D AYR47_17045 hypothetical protein K21003 pslJ; polysaccharide biosynthesis protein PslJ D AYR47_17035 acetyltransferase K21005 pslL; polysaccharide biosynthesis protein PslL D AYR47_12220 hemolysin D K19291 alg44; mannuronan synthase [EC:2.4.1.33] C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:pazo02030] D AYR47_07680 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_21670 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_17300 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_17310 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_22425 histidine kinase K03406 mcp; methyl-accepting chemotaxis protein D AYR47_23290 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_23410 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_24545 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_29435 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_23615 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_09040 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_09045 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_00600 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_09430 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_00765 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_18490 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_30735 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_30790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_19170 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_01760 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_10730 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_19760 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_02360 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_11320 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_16435 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_20860 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_29455 chemotaxis protein K03776 aer; aerotaxis receptor D AYR47_23540 chemotaxis protein K03776 aer; aerotaxis receptor D AYR47_12090 chemotaxis protein K03776 aer; aerotaxis receptor D AYR47_26665 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D AYR47_27355 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D AYR47_22265 ABC transporter K10439 rbsB; ribose transport system substrate-binding protein D AYR47_11440 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AYR47_11450 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AYR47_11455 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AYR47_06060 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AYR47_28765 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYR47_28735 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYR47_28740 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYR47_28775 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYR47_28770 protein phosphatase K03414 cheZ; chemotaxis protein CheZ D AYR47_22560 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AYR47_28760 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AYR47_12105 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYR47_30460 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYR47_28690 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYR47_22565 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AYR47_30455 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AYR47_28890 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AYR47_28840 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AYR47_29815 hypothetical protein K02417 fliN; flagellar motor switch protein FliN D AYR47_28835 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D AYR47_28755 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D AYR47_09735 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AYR47_28750 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D AYR47_09740 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:pazo02040] D AYR47_28900 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D AYR47_28895 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AYR47_28890 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AYR47_28885 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D AYR47_28880 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AYR47_28875 flagellar protein FliJ K02413 fliJ; flagellar protein FliJ D AYR47_28850 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D AYR47_05630 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D AYR47_28845 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D AYR47_28840 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AYR47_29815 hypothetical protein K02417 fliN; flagellar motor switch protein FliN D AYR47_28835 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D AYR47_28830 flagellar assembly protein FliO K02418 fliO; flagellar protein FliO/FliZ D AYR47_28825 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AYR47_28820 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AYR47_28815 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AYR47_28795 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AYR47_28810 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D AYR47_30465 flagellar biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D AYR47_30450 flgB; flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D AYR47_30445 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D AYR47_30440 flagellar biosynthesis protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D AYR47_30435 flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE D AYR47_28980 flgF; flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D AYR47_28975 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D AYR47_28970 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D AYR47_28965 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D AYR47_28960 flagellar biosynthesis protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D AYR47_28955 flgK; flagellar biosynthesis protein FlgK K02396 flgK; flagellar hook-associated protein 1 D AYR47_28950 flgL; flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D AYR47_13060 hypothetical protein K21218 motY; sodium-type flagellar protein MotY D AYR47_28940 branched-chain alpha-keto acid dehydrogenase subunit E2 K02406 fliC; flagellin D AYR47_28930 flagellar cap protein FliD K02407 fliD; flagellar hook-associated protein 2 D AYR47_28925 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D AYR47_28920 flagellar assembly protein FliT K02423 fliT; flagellar protein FliT D AYR47_28755 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D AYR47_09735 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AYR47_28750 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D AYR47_09740 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D AYR47_30470 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D AYR47_30475 flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D AYR47_08280 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D AYR47_05340 ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D AYR47_04140 RNA polymerase subunit sigma-70 K03086 rpoD; RNA polymerase primary sigma factor D AYR47_28915 AAA family ATPase K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D AYR47_11720 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D AYR47_28905 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D AYR47_28780 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D AYR47_13655 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:pazo04980] D AYR47_00570 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D AYR47_20150 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:pazo01501] D AYR47_00545 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D AYR47_22315 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D AYR47_00860 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D AYR47_15070 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AYR47_23785 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D AYR47_23790 ampC; class C beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D AYR47_23880 ATPase K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D AYR47_23885 two-component system response regulator K18073 parR; two-component system, OmpR family, response regulator ParR D AYR47_20925 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYR47_14125 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYR47_20920 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D AYR47_14120 multidrug transporter K18138 acrB; multidrug efflux pump D AYR47_26765 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D AYR47_14115 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D AYR47_18260 histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D AYR47_18265 two-component system response regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR D AYR47_09650 channel protein TolC K12340 tolC; outer membrane protein D AYR47_26045 hypothetical protein K12340 tolC; outer membrane protein D AYR47_09210 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AYR47_03205 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AYR47_16960 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AYR47_11985 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:pazo01502] D AYR47_12025 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AYR47_10770 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AYR47_05990 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AYR47_12000 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AYR47_12015 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pazo01503] D AYR47_30395 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AYR47_30400 two-component system response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D AYR47_23880 ATPase K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D AYR47_23885 two-component system response regulator K18073 parR; two-component system, OmpR family, response regulator ParR D AYR47_22450 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D AYR47_22455 bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D AYR47_22460 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D AYR47_26715 4-amino-4-deoxy-L-arabinose lipid A transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D AYR47_22465 4-amino-4-deoxy-L-arabinose lipid A transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D AYR47_22470 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D AYR47_22475 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF D AYR47_22070 serine 3-dehydrogenase K01406 prtC; serralysin [EC:3.4.24.40] D AYR47_21330 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40] D AYR47_16115 metalloprotease K01406 prtC; serralysin [EC:3.4.24.40] D AYR47_31255 two-component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D AYR47_06610 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AYR47_09775 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AYR47_14550 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D AYR47_07490 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D AYR47_29370 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D AYR47_20925 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYR47_14125 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYR47_20920 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D AYR47_14120 multidrug transporter K18138 acrB; multidrug efflux pump D AYR47_09650 channel protein TolC K12340 tolC; outer membrane protein D AYR47_26045 hypothetical protein K12340 tolC; outer membrane protein D AYR47_13615 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D AYR47_00890 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:pazo01000] C 01001 Protein kinases [BR:pazo01001] D AYR47_10460 kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D AYR47_06210 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D AYR47_17940 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D AYR47_01115 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D AYR47_09275 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D AYR47_04495 transcriptional regulator K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D AYR47_14680 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D AYR47_19435 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D AYR47_06355 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AYR47_30395 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AYR47_08370 ATPase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AYR47_30415 histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D AYR47_04350 two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D AYR47_12060 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_27410 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_10710 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_15130 ATPase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_00010 ATPase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_06830 ATPase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_01400 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D AYR47_28590 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D AYR47_15570 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D AYR47_14505 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D AYR47_23880 ATPase K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D AYR47_18260 histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D AYR47_25400 histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D AYR47_20935 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D AYR47_26955 hybrid sensor histidine kinase/response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D AYR47_26965 hybrid sensor histidine kinase/response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D AYR47_25410 hybrid sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D AYR47_27690 hybrid sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D AYR47_15865 hybrid sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D AYR47_10365 PAS domain-containing sensor histidine kinase K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3] D AYR47_08855 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AYR47_08485 ATPase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D AYR47_00680 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D AYR47_07510 PAS domain-containing sensor histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3] D AYR47_28765 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYR47_04910 hybrid sensor histidine kinase/response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D AYR47_13320 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D AYR47_01450 histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D AYR47_28910 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D AYR47_11470 histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D AYR47_15850 hybrid sensor histidine kinase/response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D AYR47_17375 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D AYR47_03075 hybrid sensor histidine kinase/response regulator K20971 ladS; two-component system, sensor histidine kinase LadS D AYR47_10235 hybrid sensor histidine kinase/response regulator K20972 retS; two-component system, sensor histidine kinase RetS C 01009 Protein phosphatases and associated proteins [BR:pazo01009] D AYR47_04770 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AYR47_17935 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D AYR47_07325 protein tyrosine phosphatase K18045 SIW14; tyrosine-protein phosphatase SIW14 [EC:3.1.3.48] D AYR47_09715 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D AYR47_30005 HAD family hydrolase K17623 PUDP; pseudouridine 5'-phosphatase [EC:3.1.3.96] C 01002 Peptidases and inhibitors [BR:pazo01002] D AYR47_23165 peptidase A1 pepsin K01381 PEP4; saccharopepsin [EC:3.4.23.25] D AYR47_11130 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D AYR47_25010 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D AYR47_11270 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D AYR47_10375 peptidase A24 K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D AYR47_27420 pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D AYR47_01130 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AYR47_04975 peptidase P60 K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D AYR47_10005 hypothetical protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D AYR47_27470 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D AYR47_09255 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AYR47_01045 iron dicitrate transport regulator FecR K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AYR47_06975 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AYR47_28320 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AYR47_18975 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AYR47_15440 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AYR47_24525 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D AYR47_17100 dimethylglycine dehydrogenase K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D AYR47_15685 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D AYR47_24835 peptidoglycan-binding protein K21470 ycbB; L,D-transpeptidase YcbB D AYR47_23400 hypothetical protein K07052 K07052; CAAX protease family protein D AYR47_29450 CAAX protease K07052 K07052; CAAX protease family protein D AYR47_20245 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D AYR47_07310 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D AYR47_07320 hypothetical protein K01414 prlC; oligopeptidase A [EC:3.4.24.70] D AYR47_22070 serine 3-dehydrogenase K01406 prtC; serralysin [EC:3.4.24.40] D AYR47_21330 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40] D AYR47_16115 metalloprotease K01406 prtC; serralysin [EC:3.4.24.40] D AYR47_05075 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-] D AYR47_05080 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-] D AYR47_12570 aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AYR47_04485 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AYR47_21350 glutamate carboxypeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D AYR47_13500 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AYR47_13550 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D AYR47_21000 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D AYR47_05575 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D AYR47_16895 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D AYR47_31205 leucyl aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D AYR47_02205 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D AYR47_15825 zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D AYR47_14565 peptidase M48 K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D AYR47_13590 zinc metallopeptidase RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D AYR47_03320 zinc-dependent peptidase K09933 mtfA; MtfA peptidase D AYR47_22065 aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D AYR47_14550 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D AYR47_11070 2-alkenal reductase K04691 hhoB; serine protease DegS [EC:3.4.21.-] D AYR47_08420 serine protease K01342 aprE; subtilisin [EC:3.4.21.62] D AYR47_14915 peptidase S9 K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D AYR47_03185 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AYR47_26520 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D AYR47_29785 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D AYR47_12405 penicillin-binding protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D AYR47_26485 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D AYR47_12650 Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D AYR47_26475 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D AYR47_24485 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D AYR47_15060 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D AYR47_00200 peptidase S24 K03503 umuD; DNA polymerase V [EC:3.4.21.-] D AYR47_07870 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D AYR47_12590 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D AYR47_26180 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D AYR47_09000 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D AYR47_22115 alpha/beta hydrolase K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-] D AYR47_16720 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D AYR47_08810 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D AYR47_05370 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] D AYR47_30355 peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-] D AYR47_24415 protease K04774 sohB; serine protease SohB [EC:3.4.21.-] D AYR47_03165 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D AYR47_09175 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D AYR47_21645 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYR47_27215 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYR47_10785 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYR47_17330 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D AYR47_22295 protease K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D AYR47_11670 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein D AYR47_10325 hypothetical protein K06894 yfhM; alpha-2-macroglobulin D AYR47_06695 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D AYR47_09805 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D AYR47_09800 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:pazo01003] D AYR47_23320 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D AYR47_08640 cellulose synthase K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D AYR47_05050 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D AYR47_06760 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D AYR47_10335 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D AYR47_02020 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D AYR47_09210 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AYR47_04605 MFS transporter K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-] D AYR47_17065 glycosyl transferase family 1 K20999 pslF; polysaccharide biosynthesis protein PslF D AYR47_17055 glycosyl transferase K21001 pslH; polysaccharide biosynthesis protein PslH D AYR47_17050 glycosyl transferase family 1 K21002 pslI; polysaccharide biosynthesis protein PslI D AYR47_12225 glycosyl transferase K19290 alg8; mannuronan synthase [EC:2.4.1.33] D AYR47_07765 hypothetical protein K14340 K14340; mannosyltransferase [EC:2.4.1.-] D AYR47_09015 glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D AYR47_07830 poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:pazo01005] D AYR47_13615 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D AYR47_13620 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D AYR47_12045 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D AYR47_13605 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D AYR47_26205 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D AYR47_25375 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D AYR47_07135 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AYR47_28535 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AYR47_21745 aspartyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D AYR47_14970 aspartyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D AYR47_09645 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D AYR47_26715 4-amino-4-deoxy-L-arabinose lipid A transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D AYR47_22465 4-amino-4-deoxy-L-arabinose lipid A transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D AYR47_10990 lipid A 3-O-deacylase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D AYR47_13650 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D AYR47_25365 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AYR47_11740 phenylphosphate carboxylase subunit delta K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D AYR47_11745 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D AYR47_09505 ADP-heptose--LPS heptosyltransferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D AYR47_09500 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D AYR47_09510 glucosyltransferase I RfaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D AYR47_09515 heptose kinase K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235] D AYR47_20285 hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D AYR47_11945 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D AYR47_07115 histidinol-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D AYR47_09610 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D AYR47_15195 hypothetical protein K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator) D AYR47_13745 hypothetical protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D AYR47_15500 epimerase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pazo01011] D AYR47_11780 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AYR47_25355 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AYR47_12020 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D AYR47_12005 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AYR47_11990 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AYR47_12025 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AYR47_10770 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AYR47_05990 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AYR47_10985 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D AYR47_03165 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D AYR47_12000 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AYR47_12015 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AYR47_21675 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AYR47_11115 murein biosynthesis protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D AYR47_09210 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AYR47_02020 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D AYR47_06760 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D AYR47_10335 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D AYR47_03205 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AYR47_16960 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AYR47_11985 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AYR47_03185 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AYR47_29785 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D AYR47_12405 penicillin-binding protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D AYR47_26520 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D AYR47_05050 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D AYR47_15685 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D AYR47_24835 peptidoglycan-binding protein K21470 ycbB; L,D-transpeptidase YcbB D AYR47_04975 peptidase P60 K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D AYR47_10005 hypothetical protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D AYR47_15005 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D AYR47_04740 transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D AYR47_03160 murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D AYR47_03195 lytic transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D AYR47_20050 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D AYR47_01080 murein transglycosylase K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D AYR47_30305 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D AYR47_11605 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D AYR47_03190 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D AYR47_06610 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AYR47_09775 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AYR47_07505 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AYR47_11310 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:pazo01004] D AYR47_30330 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AYR47_28945 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AYR47_09310 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AYR47_30315 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AYR47_09295 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AYR47_08310 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_12675 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_17160 dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_30325 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_25190 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_25200 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_26170 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_26840 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_09300 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_30000 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_24095 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_10450 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYR47_16340 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D AYR47_13610 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AYR47_15255 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D AYR47_17710 esterase K17362 ACOT13; acyl-coenzyme A thioesterase 13 [EC:3.1.2.-] D AYR47_15675 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D AYR47_02935 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D AYR47_06405 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D AYR47_08070 aminotransferase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D AYR47_02115 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_18355 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_30625 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYR47_03365 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D AYR47_24320 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D AYR47_18010 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D AYR47_28370 long-chain acyl-CoA synthetase K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-] D AYR47_31025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_31030 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_24080 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_16375 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_26275 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D AYR47_13480 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D AYR47_30335 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D AYR47_04120 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AYR47_07110 glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AYR47_30090 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:pazo01008] D AYR47_26755 non-ribosomal peptide synthetase K15658 ofaA; arthrofactin-type cyclic lipopeptide synthetase A D AYR47_19245 non-ribosomal peptide synthetase K15659 ofaB; arthrofactin-type cyclic lipopeptide synthetase B D AYR47_19250 non-ribosomal peptide synthetase K15660 ofaC; arthrofactin-type cyclic lipopeptide synthetase C D AYR47_28575 antibiotic synthesis protein MbtH K05375 mbtH; MbtH protein D AYR47_30410 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D AYR47_21915 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D AYR47_21960 non-ribosomal peptide synthetase K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69] D AYR47_21925 thiazolinyl imide reductase K12241 pchG; pyochelin biosynthesis protein PchG D AYR47_21910 enantio-pyochelin biosynthetic protein PchC K12242 pchC; pyochelin biosynthesis protein PchC D AYR47_28150 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:pazo01006] D AYR47_03440 geranyl transferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D AYR47_01730 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D AYR47_13575 farnesyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AYR47_09785 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D AYR47_06340 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D AYR47_01535 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AYR47_07405 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:pazo01007] D AYR47_27605 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AYR47_26195 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D AYR47_02075 glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D AYR47_03885 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AYR47_11495 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D AYR47_26190 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AYR47_09185 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AYR47_13090 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AYR47_11125 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AYR47_12555 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AYR47_03140 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AYR47_13350 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AYR47_00510 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AYR47_01195 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AYR47_07125 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AYR47_07120 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AYR47_25510 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AYR47_00865 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AYR47_27295 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AYR47_30540 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AYR47_16555 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AYR47_27275 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AYR47_27270 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AYR47_17325 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_21555 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYR47_29000 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AYR47_15830 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D AYR47_30890 alanine transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D AYR47_27615 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D AYR47_01175 aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D AYR47_22180 arginine aminotransferase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D AYR47_13540 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D AYR47_11795 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_15380 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_01530 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYR47_04255 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D AYR47_21520 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AYR47_10555 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D AYR47_08055 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D AYR47_19935 rocD; ornithine--oxo-acid aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D AYR47_15275 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AYR47_04205 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AYR47_30585 argD; acetylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D AYR47_12930 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AYR47_28580 2,4-diaminobutyrate 4-aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D AYR47_05420 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D AYR47_24270 hypothetical protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D AYR47_04805 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D AYR47_03355 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AYR47_03090 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AYR47_17575 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYR47_26400 2-aminoethylphosphonate--pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D AYR47_15370 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AYR47_15430 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:pazo00194] D AYR47_06990 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D AYR47_06995 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D AYR47_07000 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D AYR47_07005 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D AYR47_07010 ATP synthase F0F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D AYR47_07015 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AYR47_07020 ATP synthase F0F1 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D AYR47_07025 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AYR47_07030 ATP synthase F0F1 subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:pazo03000] D AYR47_26770 AraC family transcriptional regulator K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein D AYR47_21990 AraC family transcriptional regulator K05372 ybtA; AraC family transcriptional regulator D AYR47_22955 transcriptional regulator K06599 chpD; AraC family transcriptional regulator, chemosensory pili system protein ChpD D AYR47_26845 transcriptional regulator K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB D AYR47_14800 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D AYR47_05375 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D AYR47_23275 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D AYR47_30885 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D AYR47_01580 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D AYR47_22865 6-O-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D AYR47_04515 AraC family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator D AYR47_30595 AraC family transcriptional regulator K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator D AYR47_18290 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D AYR47_04550 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D AYR47_23175 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D AYR47_21315 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AYR47_20475 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AYR47_01915 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AYR47_12480 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AYR47_02355 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AYR47_14030 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AYR47_14780 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AYR47_21285 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AYR47_25165 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AYR47_18635 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AYR47_09930 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AYR47_01485 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AYR47_05950 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AYR47_12885 XRE family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D AYR47_17645 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D AYR47_06170 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D AYR47_31125 LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D AYR47_14830 transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D AYR47_04210 LysR family transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D AYR47_19835 LysR family transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D AYR47_15730 cysB; transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D AYR47_04840 LysR family transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator D AYR47_19900 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon D AYR47_20540 nodulation protein NfeD K14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator D AYR47_16815 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D AYR47_17730 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D AYR47_28455 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D AYR47_23785 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D AYR47_21995 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D AYR47_19600 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D AYR47_14750 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D AYR47_25080 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D AYR47_23280 transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D AYR47_18960 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D AYR47_10740 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D AYR47_28160 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D AYR47_06440 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D AYR47_10550 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D AYR47_05240 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D AYR47_06525 LysR family transcriptional regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator D AYR47_01850 transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D AYR47_26630 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D AYR47_07255 LysR family transcriptional regulator K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator D AYR47_12995 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D AYR47_22270 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AYR47_27340 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AYR47_26635 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AYR47_18440 AraC family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AYR47_18685 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AYR47_20885 transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D AYR47_11335 transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D AYR47_30905 LacI family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D AYR47_27170 LacI family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D AYR47_01110 trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D AYR47_16055 phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D AYR47_08925 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D AYR47_01035 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D AYR47_30265 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D AYR47_24875 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D AYR47_23975 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D AYR47_02290 pdhR; transcriptional regulator PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D AYR47_05680 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D AYR47_26590 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D AYR47_11555 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D AYR47_23420 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D AYR47_06485 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D AYR47_19820 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D AYR47_23950 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D AYR47_04580 transcriptional repressor BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D AYR47_17995 TetR family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D AYR47_20445 hypothetical protein K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D AYR47_14130 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D AYR47_16175 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D AYR47_17500 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D AYR47_10540 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D AYR47_30725 TetR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D AYR47_18725 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D AYR47_23920 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D AYR47_27580 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D AYR47_26175 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D AYR47_27850 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D AYR47_15530 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D AYR47_13450 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D AYR47_10010 TetR family transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D AYR47_28640 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D AYR47_21640 TetR family transcriptional regulator K22294 nicS; TetR/AcrR family transcriptional regulator, upper aerobic nicotinate degradation pathway regulator D AYR47_23195 TetR family transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D AYR47_02970 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_03050 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_06745 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_22285 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_06005 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_17600 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_17530 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_18560 DNA-binding protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_19275 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_05505 AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D AYR47_18860 AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D AYR47_15305 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D AYR47_01525 autoinducer-binding protein K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D AYR47_26760 helix-turn-helix transcriptional regulator K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons D AYR47_11915 helix-turn-helix transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D AYR47_01585 helix-turn-helix transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D AYR47_07785 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D AYR47_29035 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D AYR47_21625 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator D AYR47_15765 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D AYR47_15845 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D AYR47_00285 MerR family transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D AYR47_00255 MerR family transcriptional regulator K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D AYR47_10465 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D AYR47_03415 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D AYR47_18415 MerR family transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D AYR47_16850 MerR family transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D AYR47_01645 helix-turn-helix-type transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D AYR47_11035 helix-turn-helix-type transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D AYR47_02265 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D AYR47_07450 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D AYR47_14050 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D AYR47_24980 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D AYR47_14220 IclR family transcriptional regulator K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator D AYR47_03960 transcriptional regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYR47_08110 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYR47_14910 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYR47_29565 transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D AYR47_01260 transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D AYR47_22935 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D AYR47_00110 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D AYR47_06930 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D AYR47_00115 protein tyrosine phosphatase K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D AYR47_06935 protein tyrosine phosphatase K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D AYR47_31075 transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D AYR47_06535 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D AYR47_01775 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D AYR47_03855 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D AYR47_10250 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AYR47_12300 transcriptional regulator K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA D AYR47_09270 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D AYR47_01120 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D AYR47_09410 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D AYR47_28915 AAA family ATPase K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D AYR47_03285 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D AYR47_25265 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D AYR47_18680 AAA family ATPase K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D AYR47_24210 Fis family transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator D AYR47_01570 nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator D AYR47_22685 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D AYR47_04270 molybdenum-dependent transcriptional regulator K02019 modE; molybdate transport system regulatory protein D AYR47_18370 hypothetical protein K21829 dauR; D-arginine utilization repressor D AYR47_10775 transcriptional regulator K07726 K07726; putative transcriptional regulator D AYR47_25690 XRE family transcriptional regulator K07726 K07726; putative transcriptional regulator D AYR47_14620 Cro/Cl family transcriptional regulator K07726 K07726; putative transcriptional regulator D AYR47_10760 Cro/Cl family transcriptional regulator K07727 K07727; putative transcriptional regulator D AYR47_09450 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AYR47_05190 bifunctional antitoxin/transcriptional repressor RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D AYR47_00065 transcriptional regulator K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D AYR47_06885 transcriptional regulator K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D AYR47_28275 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D AYR47_07035 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AYR47_28985 AAA family ATPase K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D AYR47_31310 Fis family transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D AYR47_05880 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D AYR47_04955 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D AYR47_08030 hypothetical protein K07733 alpA; prophage regulatory protein D AYR47_02370 transcriptional regulator K07733 alpA; prophage regulatory protein D AYR47_06490 transcriptional regulator K07734 paiB; transcriptional regulator D AYR47_04945 hypothetical protein K07735 algH; putative transcriptional regulator D AYR47_19755 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor D AYR47_02070 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D AYR47_06600 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D AYR47_03505 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D AYR47_11970 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:pazo03021] D AYR47_22110 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D AYR47_03640 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AYR47_03785 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AYR47_06130 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D AYR47_04140 RNA polymerase subunit sigma-70 K03086 rpoD; RNA polymerase primary sigma factor D AYR47_13710 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D AYR47_30860 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AYR47_14535 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AYR47_29410 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AYR47_29855 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AYR47_04375 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AYR47_20945 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AYR47_07920 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AYR47_20020 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_30980 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_12500 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_04320 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_16970 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_21485 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_25275 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_16655 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_24905 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_18340 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_01350 RNA polymerase subunit sigma-24 K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D AYR47_05055 RNA polymerase subunit sigma-70 K03089 rpoH; RNA polymerase sigma-32 factor D AYR47_11720 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D AYR47_28780 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D AYR47_14010 RNA polymerase-binding ATPase K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D AYR47_02165 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D AYR47_03480 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D AYR47_03815 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D AYR47_11545 stringent starvation protein A K03599 sspA; stringent starvation protein A D AYR47_11550 stringent starvation protein B K03600 sspB; stringent starvation protein B D AYR47_14680 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D AYR47_14685 anti-anti-sigma factor K17762 rsbS; rsbT antagonist protein RsbS D AYR47_14690 polyvinylalcohol dehydrogenase K17763 rsbR; rsbT co-antagonist protein RsbR D AYR47_24820 PAS domain-containing sensor histidine kinase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D AYR47_15170 fused response regulator/phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D AYR47_24815 sigma factor sigB regulation protein rsbQ K19707 rsbQ; sigma-B regulation protein RsbQ D AYR47_14540 RNA polymerase subunit sigma K03597 rseA; sigma-E factor negative regulatory protein RseA D AYR47_14545 RNA polymerase subunit sigma K03598 rseB; sigma-E factor negative regulatory protein RseB D AYR47_19755 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor D AYR47_02070 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D AYR47_06600 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D AYR47_02225 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D AYR47_15660 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D AYR47_05670 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:pazo03019] D AYR47_30370 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D AYR47_11645 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D AYR47_12595 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D AYR47_09845 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AYR47_09750 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D AYR47_12270 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D AYR47_04790 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D AYR47_02960 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D AYR47_15810 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AYR47_08425 recombinase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AYR47_29040 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AYR47_13655 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AYR47_02140 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AYR47_05670 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D AYR47_02250 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AYR47_00830 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AYR47_09790 RNA chaperone Hfq K03666 hfq; host factor-I protein D AYR47_05730 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AYR47_23085 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D AYR47_02090 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D AYR47_05280 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D AYR47_28340 carbon storage regulator K03563 csrA; carbon storage regulator D AYR47_27380 carbon storage regulator K03563 csrA; carbon storage regulator D AYR47_30530 carbon storage regulator K03563 csrA; carbon storage regulator D AYR47_29875 ribonuclease activity regulator protein RraA K02553 rraA; regulator of ribonuclease activity A D AYR47_11705 RNase adaptor protein RapZ K06958 rapZ; RNase adapter protein RapZ D AYR47_29420 ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D AYR47_03030 ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:pazo03011] D AYR47_15395 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D AYR47_13555 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D AYR47_03725 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D AYR47_03645 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D AYR47_03675 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D AYR47_09855 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D AYR47_03775 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D AYR47_03690 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D AYR47_11525 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D AYR47_03760 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D AYR47_03650 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D AYR47_03780 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D AYR47_03655 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D AYR47_03695 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D AYR47_02145 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D AYR47_00975 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D AYR47_03715 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D AYR47_09860 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D AYR47_03735 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D AYR47_11110 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D AYR47_03805 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D AYR47_03740 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D AYR47_03755 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D AYR47_03750 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D AYR47_03700 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D AYR47_03685 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D AYR47_09870 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D AYR47_03800 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D AYR47_03810 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D AYR47_03795 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D AYR47_11520 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D AYR47_03710 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D AYR47_03665 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D AYR47_03720 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D AYR47_03635 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D AYR47_03680 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D AYR47_00960 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D AYR47_27280 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D AYR47_01725 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D AYR47_03730 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D AYR47_03745 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D AYR47_03705 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D AYR47_01720 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D AYR47_06055 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D AYR47_03670 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D AYR47_09195 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AYR47_12850 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AYR47_30340 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D AYR47_06050 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D AYR47_07070 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D AYR47_27285 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D AYR47_10935 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D AYR47_10585 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_01315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_01955 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_16950 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_07670 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_07675 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_03860 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_16930 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_03880 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_10565 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_07650 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_01975 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_01335 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_10580 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_01960 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_01320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_16945 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_07665 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_03865 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:pazo03009] D AYR47_12595 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D AYR47_10460 kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D AYR47_09750 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D AYR47_12600 GTPase Era K03595 era; GTPase D AYR47_01715 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D AYR47_19755 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor D AYR47_02070 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D AYR47_06600 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D AYR47_02165 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D AYR47_03480 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D AYR47_03815 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D AYR47_14445 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D AYR47_04070 rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D AYR47_07150 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D AYR47_11885 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D AYR47_05085 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D AYR47_04810 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D AYR47_07045 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AYR47_11975 ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D AYR47_11960 methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D AYR47_13445 SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D AYR47_13495 SAM-dependent methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D AYR47_09850 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D AYR47_02210 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D AYR47_12550 23S rRNA methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D AYR47_02790 50S rRNA methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D AYR47_03210 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D AYR47_21245 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D AYR47_02125 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D AYR47_05140 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D AYR47_09470 lactate dehydrogenase K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D AYR47_14980 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D AYR47_01215 23S rRNA (adenine(2503)-C2)-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D AYR47_29215 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D AYR47_15925 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AYR47_28555 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AYR47_31210 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D AYR47_30365 23S rRNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D AYR47_11185 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D AYR47_03060 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D AYR47_10635 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D AYR47_20985 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D AYR47_08375 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D AYR47_00970 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D AYR47_13215 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D AYR47_23535 protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D AYR47_10265 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D AYR47_28410 ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D AYR47_25600 cupin K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D AYR47_30370 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D AYR47_11645 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D AYR47_04950 crossover junction endodeoxyribonuclease RuvA K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D AYR47_04615 ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D AYR47_15810 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AYR47_09745 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D AYR47_01180 ribosome biogenesis GTPase Der K03977 engA; GTPase D AYR47_09795 GTPase HflX K03665 hflX; GTPase D AYR47_07175 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AYR47_06135 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D AYR47_02155 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D AYR47_02170 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D AYR47_03215 ribosome silencing factor K09710 ybeB; ribosome-associated protein D AYR47_03115 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D AYR47_02215 RNA-binding protein K07574 yhbY; RNA-binding protein D AYR47_11665 hypothetical protein K09889 yjgA; ribosome-associated protein D AYR47_11715 hypothetical protein K05808 hpf; ribosome hibernation promoting factor D AYR47_10925 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase D AYR47_30345 metal-binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:pazo03016] D AYR47_10025 hypothetical protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D AYR47_19955 ribonuclease K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D AYR47_04105 cca; multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D AYR47_27605 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AYR47_00865 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AYR47_11125 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AYR47_03140 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AYR47_13090 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AYR47_26195 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D AYR47_09185 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AYR47_13350 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AYR47_00510 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AYR47_30540 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AYR47_16555 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AYR47_27295 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AYR47_25510 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AYR47_26190 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AYR47_12555 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AYR47_01195 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AYR47_27275 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AYR47_27270 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AYR47_03885 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AYR47_11495 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D AYR47_09005 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D AYR47_29920 alanyl-tRNA editing protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] D AYR47_03935 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AYR47_26155 diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AYR47_05030 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D AYR47_13195 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D AYR47_27500 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D AYR47_02150 pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D AYR47_13690 pseudouridine synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D AYR47_01255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AYR47_16890 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AYR47_07175 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AYR47_09785 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D AYR47_07055 tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D AYR47_17660 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D AYR47_08470 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D AYR47_11965 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D AYR47_13050 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D AYR47_06115 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D AYR47_14850 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D AYR47_02720 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D AYR47_07125 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AYR47_07120 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AYR47_02075 glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D AYR47_13010 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D AYR47_12620 zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D AYR47_15185 tRNA dihydrouridine synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D AYR47_10255 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D AYR47_27565 tRNA dihydrouridine synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D AYR47_03105 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D AYR47_12630 tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D AYR47_24805 methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D AYR47_12625 tRNA 5-methoxyuridine(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D AYR47_10345 SAM-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D AYR47_02835 tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D AYR47_00965 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D AYR47_01270 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D AYR47_27945 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D AYR47_08840 tRNA (cytosine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D AYR47_15925 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AYR47_28555 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AYR47_25585 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D AYR47_25455 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D AYR47_14985 sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D AYR47_14570 response regulator SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D AYR47_25485 sulfur relay protein DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B D AYR47_25480 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D AYR47_25475 sulfurtransferase K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D AYR47_25490 sulfur relay protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D AYR47_01245 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D AYR47_14515 aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ D AYR47_23895 tRNA hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D AYR47_28305 FAD-dependent cmnm(5)s(2)U34 oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D AYR47_01305 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D AYR47_00445 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D AYR47_17270 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D AYR47_00450 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D AYR47_15145 preQ(1) synthase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D AYR47_17665 tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D AYR47_01300 tgt; tRNA-guanine(34) transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D AYR47_08875 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D AYR47_13640 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D AYR47_13415 tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D AYR47_04125 N(6)-L-threonylcarbamoyladenine synthase TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D AYR47_09770 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D AYR47_13510 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D AYR47_09845 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AYR47_02140 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:pazo03012] D AYR47_10305 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D AYR47_02160 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D AYR47_27290 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D AYR47_05795 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D AYR47_13560 elongation factor Ts K02357 tsf; elongation factor Ts D AYR47_03765 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AYR47_03770 fusA; elongation factor G K02355 fusA; elongation factor G D AYR47_10970 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D AYR47_13570 ribosome recycling factor K02838 frr; ribosome recycling factor D AYR47_10975 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D AYR47_10930 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D AYR47_25545 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D AYR47_15750 elongation factor P K02356 efp; elongation factor P D AYR47_13345 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D AYR47_11405 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D AYR47_03155 lipoyl synthase K09890 arfA; alternative ribosome-rescue factor D AYR47_31185 class I peptide chain release factor K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:pazo03110] D AYR47_25550 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D AYR47_11195 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D AYR47_26480 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D AYR47_09170 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D AYR47_02250 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AYR47_01235 hscA; molecular chaperone HscA K04044 hscA; molecular chaperone HscA D AYR47_10065 heat-shock protein K04046 yegD; hypothetical chaperone protein D AYR47_00830 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AYR47_02245 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D AYR47_10070 DNA-binding protein K05516 cbpA; curved DNA-binding protein D AYR47_04040 molecular chaperone DjlA K05801 djlA; DnaJ like chaperone protein D AYR47_01240 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D AYR47_08395 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33 D AYR47_02255 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D AYR47_08385 RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D AYR47_00835 co-chaperone GroES K04078 groES; chaperonin GroES D AYR47_14550 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D AYR47_02205 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D AYR47_07025 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AYR47_27710 fimbrial protein K07346 fimC; fimbrial chaperone protein D AYR47_26355 molecular chaperone K07346 fimC; fimbrial chaperone protein D AYR47_26980 pilus assembly protein K07346 fimC; fimbrial chaperone protein D AYR47_08835 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AYR47_31260 LTXXQ domain protein K06006 cpxP; periplasmic protein CpxP/Spy D AYR47_24625 transporter K09796 pccA; periplasmic copper chaperone A D AYR47_08420 serine protease K01342 aprE; subtilisin [EC:3.4.21.62] D AYR47_29370 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D AYR47_26200 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D AYR47_26465 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D AYR47_16695 peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D AYR47_05815 peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D AYR47_01745 peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D AYR47_11135 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D AYR47_11105 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D AYR47_24330 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D AYR47_24280 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D AYR47_04060 molecular chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D AYR47_24380 hypothetical protein K03671 TXN; thioredoxin D AYR47_05675 thioredoxin K03671 TXN; thioredoxin D AYR47_09400 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D AYR47_03520 co-chaperone YbbN K05838 ybbN; putative thioredoxin D AYR47_13030 glutaredoxin K07390 grxD; monothiol glutaredoxin D AYR47_07490 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D AYR47_05825 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D AYR47_01560 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D AYR47_00940 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D AYR47_28600 thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D AYR47_15995 thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE D AYR47_28610 dihydroneopterin aldolase K03805 dsbG; thiol:disulfide interchange protein DsbG C 04131 Membrane trafficking [BR:pazo04131] D AYR47_01220 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AYR47_11880 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D AYR47_15090 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AYR47_00735 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AYR47_16145 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYR47_00660 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:pazo03032] D AYR47_20065 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D AYR47_06320 integration host factor K05787 hupA; DNA-binding protein HU-alpha D AYR47_12545 dipicolinate synthase K03530 hupB; DNA-binding protein HU-beta D AYR47_26470 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AYR47_27265 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AYR47_15405 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AYR47_07075 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D AYR47_09875 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AYR47_31385 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AYR47_04135 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D AYR47_03610 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_02410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_31430 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_07080 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AYR47_12565 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AYR47_03150 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AYR47_30295 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AYR47_03005 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYR47_04315 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYR47_13625 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D AYR47_07470 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AYR47_04725 aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AYR47_29730 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AYR47_29165 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D AYR47_15365 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AYR47_07090 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AYR47_09700 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AYR47_09690 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AYR47_22900 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D AYR47_31450 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D AYR47_17750 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D AYR47_02415 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:pazo03036] D AYR47_12595 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D AYR47_06320 integration host factor K05787 hupA; DNA-binding protein HU-alpha D AYR47_12545 dipicolinate synthase K03530 hupB; DNA-binding protein HU-beta D AYR47_26470 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AYR47_27265 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AYR47_15405 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AYR47_10070 DNA-binding protein K05516 cbpA; curved DNA-binding protein D AYR47_07075 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D AYR47_00525 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D AYR47_10250 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AYR47_09790 RNA chaperone Hfq K03666 hfq; host factor-I protein D AYR47_31125 LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D AYR47_02970 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_03050 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_06745 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_22285 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_06005 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_17600 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_17530 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_18560 DNA-binding protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_19275 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYR47_00085 hypothetical protein K06899 ndpA; nucleoid-associated protein D AYR47_12540 nucleoid-associated protein K06899 ndpA; nucleoid-associated protein D AYR47_06905 hypothetical protein K06899 ndpA; nucleoid-associated protein D AYR47_29740 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D AYR47_31225 chromosome segregation protein ScpA K05896 scpA; segregation and condensation protein A D AYR47_31220 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D AYR47_12035 cell division protein FtsA K03590 ftsA; cell division protein FtsA D AYR47_13660 cell division protein FtsB K05589 ftsB; cell division protein FtsB D AYR47_05065 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AYR47_11985 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AYR47_25530 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D AYR47_11980 cell division protein FtsL K03586 ftsL; cell division protein FtsL D AYR47_12030 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D AYR47_12010 cell division protein FtsW K03588 ftsW; cell division protein FtsW D AYR47_05060 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D AYR47_12040 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AYR47_29735 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D AYR47_09440 cell division protein ZapA K09888 zapA; cell division protein ZapA D AYR47_05590 cell division protein ZapA K09888 zapA; cell division protein ZapA D AYR47_05585 hypothetical protein K09892 zapB; cell division protein ZapB D AYR47_11500 ATPase K06916 zapE; cell division protein ZapE D AYR47_26380 ATPase K06916 zapE; cell division protein ZapE D AYR47_20265 ATPase K06916 zapE; cell division protein ZapE D AYR47_06610 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AYR47_09775 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AYR47_20925 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYR47_14125 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYR47_28540 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D AYR47_28545 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D AYR47_28550 cell division topological specificity factor K03608 minE; cell division topological specificity factor D AYR47_15055 CDP-glycerol--UDP-pyrophosphoryl-N-acetylglucosaminyl-N-acetylmannosamine glycerophosphotransferase K13053 sulA; cell division inhibitor SulA D AYR47_11625 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AYR47_11630 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D AYR47_11635 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D AYR47_03200 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D AYR47_28745 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein D AYR47_09390 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein D AYR47_07040 chromosome partitioning protein K03496 parA; chromosome partitioning protein D AYR47_07035 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AYR47_09700 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AYR47_09690 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AYR47_07045 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AYR47_05910 recombinase XerC K03733 xerC; integrase/recombinase XerC D AYR47_22440 integrase K03733 xerC; integrase/recombinase XerC D AYR47_00945 recombinase XerD K04763 xerD; integrase/recombinase XerD D AYR47_13095 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D AYR47_08415 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D AYR47_07475 GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:pazo03400] D AYR47_14375 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D AYR47_11030 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D AYR47_14465 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D AYR47_03230 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D AYR47_08755 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D AYR47_13080 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AYR47_22110 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D AYR47_00575 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AYR47_12875 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AYR47_19070 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AYR47_06075 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AYR47_22865 6-O-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D AYR47_22860 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D AYR47_18620 DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D AYR47_31275 3-methyladenine DNA glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D AYR47_07130 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AYR47_23965 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AYR47_05130 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AYR47_26245 exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AYR47_06105 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AYR47_00900 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AYR47_04725 aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AYR47_29730 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AYR47_07470 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AYR47_24460 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D AYR47_03620 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A D AYR47_27610 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D AYR47_18075 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D AYR47_06545 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AYR47_03785 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AYR47_03640 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AYR47_06130 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D AYR47_15085 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D AYR47_13105 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D AYR47_09780 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D AYR47_00615 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D AYR47_01155 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D AYR47_03435 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D AYR47_07080 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AYR47_12565 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AYR47_03150 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AYR47_30295 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AYR47_03005 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYR47_04315 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYR47_03610 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_02410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_31430 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_01945 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D AYR47_01950 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D AYR47_01940 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D AYR47_13150 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D AYR47_00495 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D AYR47_00500 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AYR47_24040 chromosome segregation protein SMC K03546 sbcC; DNA repair protein SbcC/Rad50 D AYR47_24035 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D AYR47_02760 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D AYR47_07085 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D AYR47_06175 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D AYR47_12605 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D AYR47_29580 recR; recombination protein RecR K06187 recR; recombination protein RecR D AYR47_02260 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D AYR47_16630 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D AYR47_00595 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D AYR47_21755 DNA repair protein K10979 ku; DNA end-binding protein Ku D AYR47_21750 ligD; ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D AYR47_15365 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AYR47_07090 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AYR47_22900 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D AYR47_31450 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D AYR47_06320 integration host factor K05787 hupA; DNA-binding protein HU-alpha D AYR47_12545 dipicolinate synthase K03530 hupB; DNA-binding protein HU-beta D AYR47_26470 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AYR47_10250 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AYR47_27265 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AYR47_15405 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AYR47_08425 recombinase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AYR47_29040 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AYR47_00875 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D AYR47_00200 peptidase S24 K03503 umuD; DNA polymerase V [EC:3.4.21.-] D AYR47_24485 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D AYR47_15060 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D AYR47_17000 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D AYR47_24480 CDP-6-deoxy-delta-3,4-glucoseen reductase K14160 imuA; protein ImuA D AYR47_24475 DNA repair nucleotidyltransferase K14161 imuB; protein ImuB D AYR47_24470 dnaE2; error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D AYR47_13155 recombinase RecX K03565 recX; regulatory protein D AYR47_05965 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D AYR47_13875 ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] C 03029 Mitochondrial biogenesis [BR:pazo03029] D AYR47_11535 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D AYR47_02160 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D AYR47_27290 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D AYR47_13560 elongation factor Ts K02357 tsf; elongation factor Ts D AYR47_03765 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AYR47_03770 fusA; elongation factor G K02355 fusA; elongation factor G D AYR47_12600 GTPase Era K03595 era; GTPase D AYR47_03885 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AYR47_03140 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AYR47_00510 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AYR47_09185 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AYR47_12660 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D AYR47_26625 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D AYR47_11615 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D AYR47_11610 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D AYR47_11620 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D AYR47_27655 endonuclease K01173 ENDOG; endonuclease G, mitochondrial D AYR47_28080 endonuclease K01173 ENDOG; endonuclease G, mitochondrial D AYR47_03610 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_02410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_31430 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYR47_13595 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D AYR47_02250 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AYR47_02255 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D AYR47_00830 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AYR47_00835 co-chaperone GroES K04078 groES; chaperonin GroES D AYR47_02245 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D AYR47_01255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AYR47_16890 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AYR47_01240 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D AYR47_13030 glutaredoxin K07390 grxD; monothiol glutaredoxin D AYR47_13095 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D AYR47_01535 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AYR47_07405 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AYR47_07375 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D AYR47_07400 cytochrome B K02259 COX15; heme a synthase [EC:1.17.99.9] D AYR47_07060 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AYR47_07390 cytochrome oxidase biogenesis protein Surf1,facilitates heme A insertion K14998 SURF1; surfeit locus 1 family protein D AYR47_07410 cytochrome c oxidase assembly protein K07152 SCO1; protein SCO1 D AYR47_24620 photosynthetic protein synthase I K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:pazo02000] D AYR47_21955 ABC transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D AYR47_21950 ABC transporter K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D AYR47_09595 lipid ABC transporter permease/ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D AYR47_29375 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D AYR47_15000 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D AYR47_02860 peptidase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D AYR47_22080 peptidase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D AYR47_26575 macrolide ABC transporter ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D AYR47_19260 macrolide transporter K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D AYR47_19215 cyclic peptide transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein D AYR47_11480 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D AYR47_15010 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D AYR47_16130 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D AYR47_08085 ABC transporter permease K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D AYR47_08090 sulfate ABC transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D AYR47_08095 sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein D AYR47_08100 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D AYR47_14710 molybdenum ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D AYR47_22885 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D AYR47_22890 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein D AYR47_22895 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D AYR47_08345 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D AYR47_05485 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D AYR47_08335 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein D AYR47_08340 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D AYR47_21505 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_20605 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_05465 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_30960 alkanesulfonate transporter substrate-binding subunit K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_25060 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_25065 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_27185 alkanesulfonate transporter substrate-binding subunit K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_19355 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_27975 alkanesulfonate transporter K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_25170 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_25050 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_17835 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_07715 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D AYR47_21500 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_05455 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D AYR47_19405 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_07725 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_17830 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_25045 sulfonate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AYR47_21495 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_05450 ssuB; aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_19410 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_07720 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_25040 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AYR47_05555 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D AYR47_09830 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D AYR47_05225 phosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D AYR47_05550 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D AYR47_09825 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D AYR47_05230 phosphonate ABC transporter permease K02011 afuB; iron(III) transport system permease protein D AYR47_13015 iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D AYR47_05235 sulfate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D AYR47_16485 ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_22050 spermidine/putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_06475 ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_05410 ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_05415 spermidine/putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_19635 ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_24265 spermidine/putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_27220 spermidine/putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_18650 ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AYR47_05395 spermidine/putrescine ABC transporter permease K11074 potI; putrescine transport system permease protein D AYR47_05400 spermidine/putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein D AYR47_05405 transporter K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D AYR47_04015 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AYR47_12695 signal peptide prediction K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AYR47_20485 polyamine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AYR47_19105 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AYR47_13280 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AYR47_24950 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AYR47_16755 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AYR47_16740 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AYR47_04005 polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AYR47_20495 hypothetical protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AYR47_19125 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AYR47_13265 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AYR47_24940 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AYR47_24945 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D AYR47_16745 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D AYR47_04010 polyamine ABC transporter substrate-binding protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D AYR47_20490 polyamine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D AYR47_19130 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D AYR47_13270 spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D AYR47_16735 spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D AYR47_04020 spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D AYR47_20480 spermidine/putrescine ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D AYR47_13275 polyamine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D AYR47_24935 iron ABC transporter substrate-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D AYR47_07200 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_20410 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_19790 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_16215 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_30965 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_18250 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_04520 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_04560 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_08950 histidine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_08990 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AYR47_04565 choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D AYR47_08955 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D AYR47_04570 choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D AYR47_08960 hypothetical protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D AYR47_11395 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D AYR47_11390 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D AYR47_11400 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D AYR47_11385 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D AYR47_23255 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D AYR47_23250 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D AYR47_23260 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D AYR47_21050 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AYR47_31090 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AYR47_31105 sugar ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D AYR47_31100 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D AYR47_31095 sugar ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D AYR47_30220 sugar ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein D AYR47_18595 sugar ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein D AYR47_30210 arabinose ABC transporter permease K10538 araH; L-arabinose transport system permease protein D AYR47_18605 arabinose ABC transporter permease K10538 araH; L-arabinose transport system permease protein D AYR47_30215 araG; L-arabinose transporter ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D AYR47_18600 araG; L-arabinose transporter ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D AYR47_18430 sugar ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D AYR47_18420 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D AYR47_18425 D-xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D AYR47_26665 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D AYR47_27355 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D AYR47_22265 ABC transporter K10439 rbsB; ribose transport system substrate-binding protein D AYR47_26655 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D AYR47_27345 ABC transporter permease K10440 rbsC; ribose transport system permease protein D AYR47_22260 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D AYR47_22255 D-ribose transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D AYR47_27350 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D AYR47_26660 ribonucleotide-diphosphate reductase subunit alpha K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D AYR47_24395 sugar ABC transporter substrate-binding protein K17205 xltC; putative xylitol transport system substrate-binding protein D AYR47_18465 sugar ABC transporter permease K17206 xltB; putative xylitol transport system permease protein D AYR47_18470 D-ribose transporter ATP-binding protein K17207 xltA; putative xylitol transport system ATP-binding protein D AYR47_19740 rhizopine-binding protein K17213 K17213; inositol transport system substrate-binding protein D AYR47_23715 rhizopine-binding protein K17213 K17213; inositol transport system substrate-binding protein D AYR47_18665 rhizopine-binding protein K17213 K17213; inositol transport system substrate-binding protein D AYR47_19750 ABC transporter K17214 K17214; inositol transport system permease protein D AYR47_19745 D-ribose transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein D AYR47_25235 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein D AYR47_25250 ABC transporter permease K17322 glpP; glycerol transport system permease protein D AYR47_25245 sugar ABC transporter permease K17323 glpQ; glycerol transport system permease protein D AYR47_25260 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D AYR47_25255 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D AYR47_21065 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D AYR47_19060 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D AYR47_21060 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D AYR47_21055 sugar ABC transporter permease K10229 smoG; polyol transport system permease protein D AYR47_26915 ABC transporter permease K02069 STAR2; UDP-glucose/iron transport system permease protein D AYR47_26920 ABC transporter ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D AYR47_07545 ABC transporter permease K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D AYR47_11760 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D AYR47_07555 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D AYR47_11755 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D AYR47_07550 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D AYR47_11750 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D AYR47_07540 ABC transporter K18480 linN; cholesterol transport system auxiliary component D AYR47_11765 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein D AYR47_11770 anti-anti-sigma factor K07122 mlaB; phospholipid transport system transporter-binding protein D AYR47_26745 ribose ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D AYR47_06395 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AYR47_26250 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D AYR47_23080 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AYR47_06390 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D AYR47_23075 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D AYR47_06385 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D AYR47_23070 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D AYR47_06380 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AYR47_23065 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AYR47_16045 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D AYR47_16050 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D AYR47_16040 phosphonate/organophosphate ester transporter subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D AYR47_12085 amino acid ABC transporter substrate-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D AYR47_17540 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein D AYR47_13770 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein D AYR47_17545 amino acid ABC transporter permease K10016 hisQ; histidine transport system permease protein D AYR47_13775 amino acid ABC transporter permease K10016 hisQ; histidine transport system permease protein D AYR47_17535 amino acid transporter K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D AYR47_13760 amino acid transporter K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D AYR47_17550 ABC transporter substrate-binding protein K10014 hisJ; histidine transport system substrate-binding protein D AYR47_13780 ABC transporter substrate-binding protein K10014 hisJ; histidine transport system substrate-binding protein D AYR47_12985 ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D AYR47_12975 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D AYR47_12980 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D AYR47_12970 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D AYR47_02350 ABC transporter substrate-binding protein K10018 occT; octopine/nopaline transport system substrate-binding protein D AYR47_02330 ABC transporter permease K10019 occM; octopine/nopaline transport system permease protein D AYR47_02335 ABC transporter permease K10020 occQ; octopine/nopaline transport system permease protein D AYR47_01480 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D AYR47_12280 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D AYR47_12285 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D AYR47_12290 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D AYR47_08280 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D AYR47_05340 ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D AYR47_08275 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D AYR47_08270 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D AYR47_18365 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D AYR47_30620 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D AYR47_30610 amino acid ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein D AYR47_30615 ABC transporter K10024 aotQ; arginine/ornithine transport system permease protein D AYR47_30600 amino acid transporter K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D AYR47_26595 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_09945 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_26065 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_25140 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_13975 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D AYR47_26600 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D AYR47_09950 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D AYR47_25160 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D AYR47_26075 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D AYR47_13970 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D AYR47_25155 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D AYR47_26070 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D AYR47_26605 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D AYR47_13965 livM; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D AYR47_09955 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D AYR47_26610 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_09960 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_25150 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_26080 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_13960 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D AYR47_25145 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_26060 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_26615 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_13955 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_09965 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D AYR47_08175 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D AYR47_08245 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D AYR47_07415 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D AYR47_16845 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D AYR47_08235 ABC transporter permease K02072 metI; D-methionine transport system permease protein D AYR47_07420 metal ABC transporter permease K02072 metI; D-methionine transport system permease protein D AYR47_16840 metal ABC transporter permease K02072 metI; D-methionine transport system permease protein D AYR47_08240 ABC transporter K02071 metN; D-methionine transport system ATP-binding protein D AYR47_07425 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D AYR47_10130 branched-chain amino acid ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D AYR47_10125 urea ABC transporter permease K11960 urtB; urea transport system permease protein D AYR47_10120 urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D AYR47_10115 urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D AYR47_10110 urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D AYR47_08700 amino acid ABC transporter K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein D AYR47_08695 ABC transporter permease K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D AYR47_08690 ABC transporter permease K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D AYR47_08705 amino acid transporter K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1] D AYR47_04630 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_09020 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_09025 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_24370 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_27015 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_19945 restriction endonuclease K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_05685 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_08795 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_24985 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_21540 amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_22185 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_28005 flagellar motor switch protein FliY K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_27095 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_27235 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_18555 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_30670 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_03470 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_29600 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_30175 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYR47_09030 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_08185 polar amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_08190 glutamine ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_24360 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_27020 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_05690 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_05695 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_24990 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_21560 amino acid ABC transporter K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_21565 amino acid ABC transporter K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_22190 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_22195 nickel permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_27105 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_27230 polar amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_18545 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_18550 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_30660 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_28015 amino acid ABC transporter permease/ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D AYR47_24365 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AYR47_22180 arginine aminotransferase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D AYR47_05700 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D AYR47_08195 glutamine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D AYR47_09035 peptide ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D AYR47_21570 phosphate ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D AYR47_24355 ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D AYR47_24995 glnQ; glutamine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D AYR47_27100 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D AYR47_27225 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D AYR47_30665 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D AYR47_11440 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AYR47_11450 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AYR47_11455 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AYR47_06060 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D AYR47_11435 peptide ABC transporter permease K12369 dppB; dipeptide transport system permease protein D AYR47_11430 peptide transporter K12370 dppC; dipeptide transport system permease protein D AYR47_11425 dppD; peptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D AYR47_11420 peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D AYR47_21310 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYR47_21885 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYR47_18020 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYR47_20620 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYR47_15335 diguanylate cyclase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYR47_27045 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYR47_19905 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYR47_21305 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYR47_21880 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYR47_18025 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYR47_20625 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYR47_15315 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYR47_27040 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYR47_19910 peptide ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYR47_21875 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYR47_18030 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYR47_20630 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYR47_15320 nickel ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYR47_27035 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYR47_19915 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYR47_21300 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYR47_21295 microcin ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYR47_21870 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYR47_18035 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYR47_20635 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYR47_15325 methionine ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYR47_27030 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYR47_19920 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYR47_15330 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D AYR47_20040 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D AYR47_20045 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D AYR47_24285 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D AYR47_20035 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein D AYR47_24290 peptide ABC transporter permease K13894 yejB; microcin C transport system permease protein D AYR47_20030 ABC transporter permease K13895 yejE; microcin C transport system permease protein D AYR47_24295 ABC transporter permease K13895 yejE; microcin C transport system permease protein D AYR47_20025 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D AYR47_24300 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D AYR47_27205 fecB; iron-dicitrate transporter substrate-binding subunit K23181 fecB; ferric citrate transport system substrate-binding protein D AYR47_27195 fecD; iron-dicitrate transporter subunit FecD K23182 fecD; ferric citrate transport system permease protein D AYR47_27200 iron ABC transporter K23183 fecC; ferric citrate transport system permease protein D AYR47_27190 iron ABC transporter K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18] D AYR47_02050 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D AYR47_02045 ABC transporter permease K25133 hmuU; heme transport system permease protein D AYR47_02040 hemin ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D AYR47_27665 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D AYR47_17915 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D AYR47_13815 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D AYR47_18325 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D AYR47_10145 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D AYR47_27670 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D AYR47_13810 iron-siderophore ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D AYR47_18320 iron-siderophore ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D AYR47_10140 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D AYR47_27675 histidinol phosphatase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D AYR47_13805 iron ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D AYR47_18315 ferrichrome ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D AYR47_10150 histidinol phosphatase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D AYR47_03455 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D AYR47_07455 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D AYR47_16780 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D AYR47_07440 hypothetical protein K09816 znuB; zinc transport system permease protein D AYR47_16770 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein D AYR47_16775 manganese ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D AYR47_06630 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D AYR47_06625 zinc ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D AYR47_06620 manganese ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D AYR47_12575 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D AYR47_12580 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D AYR47_11725 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D AYR47_15645 ABC transporter permease K25151 gldF; gliding motility-associated transport system permease protein D AYR47_15650 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D AYR47_15640 ABC transporter K25153 gldG; gliding motility-associatede transport system auxiliary component D AYR47_15115 cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein D AYR47_15125 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein D AYR47_15120 ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D AYR47_15980 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D AYR47_15975 heme ABC transporter permease K02195 ccmC; heme exporter protein C D AYR47_15970 heme transporter K02194 ccmB; heme exporter protein B D AYR47_15965 heme ABC transporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D AYR47_05060 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D AYR47_05065 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AYR47_16590 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D AYR47_26730 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D AYR47_05620 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D AYR47_16585 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AYR47_26725 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AYR47_26700 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D AYR47_26040 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D AYR47_03540 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D AYR47_15665 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D AYR47_06200 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D AYR47_26705 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AYR47_26035 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AYR47_03535 methionine ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AYR47_15670 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AYR47_06205 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AYR47_25120 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D AYR47_17435 hypothetical protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D AYR47_05955 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D AYR47_14990 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D AYR47_19180 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D AYR47_14715 citrate-proton symporter K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter D AYR47_00690 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D AYR47_14085 alpha-ketoglutarate permease K02625 pcaT; MFS transporter, MHS family, dicarboxylic acid transporter PcaT D AYR47_23430 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D AYR47_23670 glycine/betaine ABC transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D AYR47_06400 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D AYR47_11580 glucarate transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D AYR47_28120 MFS transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D AYR47_23660 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D AYR47_07235 glucarate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D AYR47_21475 MFS transporter K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein D AYR47_12430 MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D AYR47_14055 4-hydroxybenzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D AYR47_28240 MFS transporter K08196 mucK; MFS transporter, AAHS family, cis,cis-muconate transporter D AYR47_21850 MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein D AYR47_14765 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D AYR47_08135 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D AYR47_12310 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D AYR47_28390 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D AYR47_05640 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D AYR47_29835 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D AYR47_00860 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D AYR47_21375 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D AYR47_22430 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D AYR47_10485 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D AYR47_25110 MFS transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D AYR47_18345 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D AYR47_23450 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D AYR47_15200 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D AYR47_14140 arabinose transporter permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D AYR47_24585 arabinose ABC transporter permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D AYR47_17640 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D AYR47_07740 EmrB/QacA family drug resistance transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D AYR47_23205 EmrB/QacA family drug resistance transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D AYR47_26210 emrB; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D AYR47_25850 multidrug MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D AYR47_23685 Fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D AYR47_14400 hypothetical protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D AYR47_09280 hypothetical protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D AYR47_14395 hypothetical protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D AYR47_21395 MFS transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein D AYR47_30925 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D AYR47_23160 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D AYR47_05275 phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D AYR47_11700 phosphocarrier protein HPr K08485 ptsO; phosphocarrier protein NPr D AYR47_11340 PTS fructose transporter subunit IIA K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D AYR47_01050 PTS N-acetyl-D-glucosamine transporter K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D AYR47_01090 PTS mannose transporter subunit IIC K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D AYR47_01055 PTS N-acetyl-D-glucosamine transporter K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D AYR47_01105 trehalose permease IIC protein K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D AYR47_24155 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D AYR47_11710 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D AYR47_29380 aquaporin Z K06188 aqpZ; aquaporin Z D AYR47_25105 aquaporin Z K06188 aqpZ; aquaporin Z D AYR47_13005 aquaporin K02440 glpF; glycerol uptake facilitator D AYR47_16135 ion transporter K10716 kch; voltage-gated potassium channel D AYR47_15905 ammonium transporter K03320 amt; ammonium transporter, Amt family D AYR47_05925 ammonia channel protein K03320 amt; ammonium transporter, Amt family D AYR47_16580 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_26905 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_30915 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_30945 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_28460 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_05860 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_24880 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_27870 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_24045 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYR47_11545 stringent starvation protein A K03599 sspA; stringent starvation protein A D AYR47_22610 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D AYR47_22615 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D AYR47_24015 BatB protein K07114 yfbK; Ca-activated chloride channel homolog D AYR47_24020 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D AYR47_07915 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D AYR47_25350 hypothetical protein K19416 yccA; modulator of FtsH protease D AYR47_02775 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D AYR47_09420 potassium transporter KefA K05802 mscK; potassium-dependent mechanosensitive channel D AYR47_00550 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel D AYR47_28565 mechanosensitive ion channel protein K22044 ybiO; moderate conductance mechanosensitive channel D AYR47_03560 mechanosensitive ion channel protein K22044 ybiO; moderate conductance mechanosensitive channel D AYR47_30510 magnesium transporter K06213 mgtE; magnesium transporter D AYR47_16140 urea transporter K08717 utp; urea transporter D AYR47_28755 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D AYR47_09735 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AYR47_28750 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D AYR47_09740 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D AYR47_13060 hypothetical protein K21218 motY; sodium-type flagellar protein MotY D AYR47_16525 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D AYR47_18875 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D AYR47_25385 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D AYR47_08155 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D AYR47_06155 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D AYR47_16540 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D AYR47_25380 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D AYR47_18880 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D AYR47_06160 protein TolR K03559 exbD; biopolymer transport protein ExbD D AYR47_08160 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D AYR47_00480 protein TolQ K03562 tolQ; biopolymer transport protein TolQ D AYR47_19320 protein TolQ K03562 tolQ; biopolymer transport protein TolQ D AYR47_00475 protein TolR K03560 tolR; biopolymer transport protein TolR D AYR47_19325 protein TolR K03560 tolR; biopolymer transport protein TolR D AYR47_20995 magnesium transporter K03284 corA; magnesium transporter D AYR47_30095 magnesium transporter K03284 corA; magnesium transporter D AYR47_29870 CmaX protein K16074 zntB; zinc transporter D AYR47_30795 magnesium transporter CorA K16074 zntB; zinc transporter D AYR47_25515 camphor resistance protein CrcB K06199 crcB; fluoride exporter D AYR47_22525 bestrophin K08994 yneE; ion channel-forming bestrophin family protein D AYR47_18495 effector protein K08994 yneE; ion channel-forming bestrophin family protein D AYR47_00280 mercuric transport protein K08363 merT; mercuric ion transport protein D AYR47_00275 mercuric transport protein periplasmic component K08364 merP; periplasmic mercuric ion binding protein D AYR47_00270 mercury transport protein MerC K19058 merC; mercuric ion transport protein D AYR47_00250 mercury resistance protein K19059 merE; mercuric ion transport protein D AYR47_00990 transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D AYR47_01095 maltoporin K02024 lamB; maltoporin D AYR47_17965 opacity protein K16079 omp31; outer membrane immunogenic protein D AYR47_29850 porin K03286 TC.OOP; OmpA-OmpF porin, OOP family D AYR47_24115 hypothetical protein K06076 fadL; long-chain fatty acid transport protein D AYR47_31355 Long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein D AYR47_19050 nucleoside-specific channel-forming protein Tsx K05517 tsx; nucleoside-specific channel-forming protein D AYR47_09120 o-succinylbenzoate--CoA ligase K07347 fimD; outer membrane usher protein D AYR47_27725 fimbrial protein K07347 fimD; outer membrane usher protein D AYR47_26985 fimbrial protein K07347 fimD; outer membrane usher protein D AYR47_26350 fimbrial assembly protein K07347 fimD; outer membrane usher protein D AYR47_12210 transcriptional regulator K16081 algE; alginate production protein D AYR47_13825 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor D AYR47_17200 amino acid ABC transporter substrate-binding protein K16091 fecA; Fe(3+) dicitrate transport protein D AYR47_17925 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D AYR47_02865 heme acquisition protein HasAp K12545 hasA; heme acquisition protein HasA D AYR47_02870 ligand-gated channel K16152 hasR; heme acquisition protein HasR D AYR47_02650 ligand-gated channel K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D AYR47_16645 ligand-gated channel K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D AYR47_23405 TonB-dependent receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D AYR47_20010 TonB-dependent receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D AYR47_19210 ligand-gated channel K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D AYR47_17030 ferric-pseudobactin BN7/BN8 receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D AYR47_05160 ligand-gated channel protein K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D AYR47_14265 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D AYR47_30020 hypothetical protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D AYR47_00750 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D AYR47_16530 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_21890 ligand-gated channel K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_21980 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_21985 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_12735 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_20610 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_05650 ligand-gated channel K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_19620 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_08525 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_16355 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_30970 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_11065 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_18330 energy transducer TonB K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_18350 energy transducer TonB K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_10155 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_10165 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_04330 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_24895 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_12400 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_16995 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_27055 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_27110 ligand-gated channel K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_27175 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_27210 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_09540 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_18525 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_19370 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYR47_02850 peptidase K12538 hasF; outer membrane protein, type I secretion system D AYR47_10695 type I secretion protein TolC K15725 czcC; outer membrane protein, heavy metal efflux system D AYR47_19685 hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system D AYR47_06820 hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system D AYR47_09650 channel protein TolC K12340 tolC; outer membrane protein D AYR47_26045 hypothetical protein K12340 tolC; outer membrane protein D AYR47_21810 RND transporter K18300 oprN; outer membrane protein, multidrug efflux system D AYR47_26765 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D AYR47_14115 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D AYR47_17075 sugar ABC transporter substrate-binding protein K20987 pslD; polysaccharide biosynthesis/export protein PslD D AYR47_19510 capsular biosynthesis protein K01991 wza; polysaccharide biosynthesis/export protein D AYR47_21435 porin K07267 oprB; porin D AYR47_31085 porin K07267 oprB; porin D AYR47_18480 porin K07267 oprB; porin D AYR47_00545 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D AYR47_22315 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D AYR47_13595 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D AYR47_01185 outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D AYR47_14595 hypothetical protein K07287 bamC; outer membrane protein assembly factor BamC D AYR47_11180 DNA transporter K05807 bamD; outer membrane protein assembly factor BamD D AYR47_02270 hypothetical protein K06186 bamE; outer membrane protein assembly factor BamE D AYR47_26235 hypothetical protein K07278 tamA; translocation and assembly module TamA D AYR47_26230 hypothetical protein K09800 tamB; translocation and assembly module TamB D AYR47_02950 hypothetical protein K21449 ata; trimeric autotransporter adhesin D AYR47_11730 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D AYR47_11735 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D AYR47_04055 LPS biosynthesis protein K04744 lptD; LPS-assembly protein D AYR47_03145 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D AYR47_08655 cellulose synthase K20543 bcsC; cellulose synthase operon protein C D AYR47_03120 magnesium/cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein D AYR47_01620 murein hydrolase regulator LrgA K06518 cidA; holin-like protein D AYR47_03250 murein hydrolase transporter LrgA K06518 cidA; holin-like protein D AYR47_31195 aromatic amino acid transporter K11734 aroP; aromatic amino acid transport protein AroP D AYR47_08710 GABA permease K11735 gabP; GABA permease D AYR47_18285 GABA permease K11735 gabP; GABA permease D AYR47_23385 amino acid transporter K11737 cycA; D-serine/D-alanine/glycine transporter D AYR47_03350 D-alanine/D-serine/glycine permease K11737 cycA; D-serine/D-alanine/glycine transporter D AYR47_08975 proY; proline-specific permease K16234 hutT; histidine transporter D AYR47_12845 amino acid permease K14052 puuP; putrescine importer D AYR47_31280 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D AYR47_31285 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D AYR47_03295 ethanolamine transporter K16238 eat; ethanolamine permease D AYR47_15545 ethanolamine permease K16238 eat; ethanolamine permease D AYR47_03040 fieF; cation-efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF D AYR47_11695 divalent cation transporter K07238 TC.ZIP; zinc transporter, ZIP family D AYR47_10705 cation transporter K15726 czcA; heavy metal efflux system protein D AYR47_31610 cation transporter K07787 cusA; copper/silver efflux system protein D AYR47_19695 cation transporter K07787 cusA; copper/silver efflux system protein D AYR47_06810 cation transporter K07787 cusA; copper/silver efflux system protein D AYR47_21815 transporter K18299 mexF; multidrug efflux pump D AYR47_13460 multidrug transporter AcrB K18303 mexK; multidrug efflux pump D AYR47_20920 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D AYR47_14120 multidrug transporter K18138 acrB; multidrug efflux pump D AYR47_08220 ACR family transporter K21134 triC; multidrug efflux pump D AYR47_21095 multidrug transporter subunit MdtB K07788 mdtB; multidrug efflux pump D AYR47_21100 acriflavine resistance protein B K07789 mdtC; multidrug efflux pump D AYR47_09635 multidrug DMT transporter K03297 emrE; small multidrug resistance pump D AYR47_16620 molecular chaperone K11741 sugE; quaternary ammonium compound-resistance protein SugE D AYR47_18970 amino acid metabolite efflux pump K15268 eamA; O-acetylserine/cysteine efflux transporter D AYR47_16925 transporter K11939 rhtA; inner membrane transporter RhtA D AYR47_21445 sugar:proton symporter K02856 rhaT; L-rhamnose-H+ transport protein D AYR47_24445 hypothetical protein K05786 rarD; chloramphenicol-sensitive protein RarD D AYR47_04285 chloramphenical resistance permease RarD K05786 rarD; chloramphenicol-sensitive protein RarD D AYR47_22710 chemotaxis protein K05786 rarD; chloramphenicol-sensitive protein RarD D AYR47_14335 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AYR47_19020 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AYR47_19025 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AYR47_22470 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D AYR47_17305 sodium:proton antiporter K07084 yuiF; putative amino acid transporter D AYR47_10690 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D AYR47_30895 permease DsdX K03299 TC.GNTP; gluconate:H+ symporter, GntP family D AYR47_02295 L-lactate permease K03303 lutP; lactate permease D AYR47_16670 BCCT transporter K05020 opuD; glycine betaine transporter D AYR47_08295 choline transporter K02168 betT; choline/glycine/proline betaine transport protein D AYR47_04575 beta-aspartyl-peptidase K02168 betT; choline/glycine/proline betaine transport protein D AYR47_26145 C4-dicarboxylate ABC transporter K03304 tehA; tellurite resistance protein D AYR47_10520 calcium:proton antiporter K07300 chaA; Ca2+:H+ antiporter D AYR47_11600 conjugal transfer protein TraR K07301 yrbG; cation:H+ antiporter D AYR47_09455 sodium:proline symporter K11928 putP; sodium/proline symporter D AYR47_16225 actP; cation acetate symporter K14393 actP; cation/acetate symporter D AYR47_07530 glutamate:protein symporter K11102 gltP; proton glutamate symport protein D AYR47_23970 C4-dicarboxylate ABC transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D AYR47_24650 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D AYR47_18230 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D AYR47_30385 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D AYR47_19155 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D AYR47_16820 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D AYR47_17635 serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D AYR47_13905 nhaA; sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D AYR47_13535 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D AYR47_09425 cvrA; K+/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter D AYR47_04750 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter D AYR47_15910 sodium:proton antiporter K03455 KEA1_2_3; K+:H+ antiporter D AYR47_06560 potassium transporter K26735 KEA4_5_6; K+:H+ antiporter D AYR47_07145 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein D AYR47_17255 cytosine permease K10974 codB; cytosine permease D AYR47_11800 uracil permease K02824 uraA; uracil permease D AYR47_15295 uracil permease K24206 uacT; uric acid transporter D AYR47_28520 purine permease K24206 uacT; uric acid transporter D AYR47_20855 xanthine permease XanP K16345 xanP; xanthine permease XanP D AYR47_10545 xanthine permease XanP K16345 xanP; xanthine permease XanP D AYR47_02830 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D AYR47_28475 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D AYR47_23915 HAAAP family serine/threonine permease K03837 sdaC; serine transporter D AYR47_12470 HAAAP family serine/threonine permease K03837 sdaC; serine transporter D AYR47_29775 hypothetical protein K05782 benE; benzoate membrane transport protein D AYR47_21220 chloride channel protein K03281 clcA; chloride channel protein, CIC family D AYR47_04830 transporter K07240 chrA; chromate transporter D AYR47_04835 chromate transporter K07240 chrA; chromate transporter D AYR47_07195 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D AYR47_01790 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D AYR47_19000 divalent metal cation transporter K03322 mntH; manganese transport protein D AYR47_23800 C4-dicarboxylate ABC transporter K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D AYR47_23795 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D AYR47_07570 hypothetical protein K03324 yjbB; phosphate:Na+ symporter D AYR47_00105 arsenic transporter K03893 arsB; arsenical pump membrane protein D AYR47_06925 arsenic transporter K03893 arsB; arsenical pump membrane protein D AYR47_08730 arsenic resistance protein K03325 ACR3; arsenite transporter D AYR47_26115 cation:proton antiporter K05559 phaA; multicomponent K+:H+ antiporter subunit A D AYR47_26120 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D AYR47_26125 cation:proton antiporter K05561 phaD; multicomponent K+:H+ antiporter subunit D D AYR47_26130 cation:proton antiporter K05562 phaE; multicomponent K+:H+ antiporter subunit E D AYR47_26135 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D AYR47_26140 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G D AYR47_11115 murein biosynthesis protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D AYR47_11590 malate transporter K24180 mleP; malate permease and related proteins D AYR47_31135 lysine transporter LysE K06895 lysE; L-lysine exporter family protein LysE/ArgO D AYR47_01360 lysine transporter LysE K06895 lysE; L-lysine exporter family protein LysE/ArgO D AYR47_05785 threonine transporter RhtB K05834 rhtB; homoserine/homoserine lactone efflux protein D AYR47_21340 amino acid transporter K05834 rhtB; homoserine/homoserine lactone efflux protein D AYR47_28480 lysine transporter LysE K05834 rhtB; homoserine/homoserine lactone efflux protein D AYR47_23490 lysine transporter LysE K05834 rhtB; homoserine/homoserine lactone efflux protein D AYR47_10765 lysine transporter LysE K05835 rhtC; threonine efflux protein D AYR47_11895 lysine transporter LysE K05835 rhtC; threonine efflux protein D AYR47_22960 chemotaxis protein K06600 chpE; chemosensory pili system protein ChpE D AYR47_22925 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D AYR47_22920 branched-chain amino acid ABC transporter K26606 azlD; branched chain amino acid efflux pump D AYR47_14480 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein D AYR47_14485 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D AYR47_14490 tricarboxylic transporter K07795 tctC; putative tricarboxylic transport membrane protein D AYR47_14575 permease K03548 perM; putative permease D AYR47_10230 hypothetical protein K05595 marC; multiple antibiotic resistance protein D AYR47_12010 cell division protein FtsW K03588 ftsW; cell division protein FtsW D AYR47_11880 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D AYR47_18755 hypothetical protein K23242 mntP; manganese efflux pump family protein D AYR47_21800 iron transporter K07243 FTR; high-affinity iron transporter D AYR47_05760 cystathionine gamma-synthase K07243 FTR; high-affinity iron transporter D AYR47_21785 iron transporter K07224 efeO; iron uptake system component EfeO D AYR47_21790 peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D AYR47_02750 carbon starvation protein A K23676 btsT; pyruvate/proton symporter D AYR47_16535 energy transducer TonB K03832 tonB; periplasmic protein TonB D AYR47_04940 energy transducer TonB K03832 tonB; periplasmic protein TonB D AYR47_08150 energy transducer TonB K03832 tonB; periplasmic protein TonB D AYR47_30025 hypothetical protein K03832 tonB; periplasmic protein TonB D AYR47_06165 energy transducer TonB K03832 tonB; periplasmic protein TonB D AYR47_18885 energy transducer TonB K03832 tonB; periplasmic protein TonB D AYR47_19330 energy transducer TonB K03832 tonB; periplasmic protein TonB D AYR47_00460 peptidoglycan-binding protein K03640 pal; peptidoglycan-associated lipoprotein D AYR47_29665 hypothetical protein K03646 tolA; colicin import membrane protein D AYR47_00470 protein TolA K03646 tolA; colicin import membrane protein D AYR47_00465 translocation protein TolB K03641 tolB; TolB protein D AYR47_04885 malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D AYR47_04875 malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit D AYR47_26215 hemolysin D K03543 emrA; membrane fusion protein, multidrug efflux system D AYR47_23200 multidrug ABC transporter permease K03543 emrA; membrane fusion protein, multidrug efflux system D AYR47_02855 hemolysin D K12537 hasE; membrane fusion protein, type I secretion system D AYR47_22085 hemolysin D K12537 hasE; membrane fusion protein, type I secretion system D AYR47_10700 efflux transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D AYR47_19690 efflux transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D AYR47_06815 efflux transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D AYR47_21820 efflux transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system D AYR47_13455 efflux transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D AYR47_12075 efflux transporter periplasmic adaptor subunit K21135 mexM; membrane fusion protein, multidrug efflux system D AYR47_20925 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYR47_14125 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYR47_08210 efflux transporter periplasmic adaptor subunit K21136 triA; membrane fusion protein, multidrug efflux system D AYR47_08215 efflux transporter periplasmic adaptor subunit K21137 triB; membrane fusion protein, multidrug efflux system D AYR47_21090 efflux transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D AYR47_26570 efflux transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D AYR47_19255 efflux transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D AYR47_19435 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D AYR47_21665 aminotransferase K03811 pnuC; nicotinamide mononucleotide transporter D AYR47_27770 sensory protein TspO K05770 TSPO; translocator protein D AYR47_21140 methyltransferase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D AYR47_17890 methyltransferase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D AYR47_28490 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D AYR47_29300 copper resistance protein CopD K07245 pcoD; copper resistance protein D D AYR47_17485 copper resistance protein CopD K07245 pcoD; copper resistance protein D D AYR47_06825 copper resistance protein CopD K07245 pcoD; copper resistance protein D D AYR47_29305 copper resistance protein CopC K07156 copC; copper resistance protein C D AYR47_17490 hypothetical protein K07156 copC; copper resistance protein C D AYR47_23870 structural protein MipA K07274 mipA; MipA family protein D AYR47_12920 structural protein MipA K07274 mipA; MipA family protein C 02044 Secretion system [BR:pazo02044] D AYR47_09650 channel protein TolC K12340 tolC; outer membrane protein D AYR47_26045 hypothetical protein K12340 tolC; outer membrane protein D AYR47_02860 peptidase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D AYR47_22080 peptidase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D AYR47_02855 hemolysin D K12537 hasE; membrane fusion protein, type I secretion system D AYR47_22085 hemolysin D K12537 hasE; membrane fusion protein, type I secretion system D AYR47_02850 peptidase K12538 hasF; outer membrane protein, type I secretion system D AYR47_18790 general secretion pathway protein GspC K02452 gspC; general secretion pathway protein C D AYR47_18820 type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D AYR47_20780 hypothetical protein K02453 gspD; general secretion pathway protein D D AYR47_27115 type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D AYR47_05515 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D AYR47_18825 type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D AYR47_20755 general secretion pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D AYR47_27165 type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D AYR47_18830 type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D AYR47_20750 hypothetical protein K02455 gspF; general secretion pathway protein F D AYR47_27160 type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D AYR47_18800 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D AYR47_20745 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D AYR47_20785 general secretion pathway protein GspG K02456 gspG; general secretion pathway protein G D AYR47_20790 type II secretion system protein G K02456 gspG; general secretion pathway protein G D AYR47_27155 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D AYR47_18785 type II secretion system protein GspH K02457 gspH; general secretion pathway protein H D AYR47_27150 general secretion pathway protein GspH K02457 gspH; general secretion pathway protein H D AYR47_18795 type II secretion system protein GspI K02458 gspI; general secretion pathway protein I D AYR47_27145 general secretion pathway protein GspI K02458 gspI; general secretion pathway protein I D AYR47_18780 type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D AYR47_27140 general secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J D AYR47_18805 HxcX atypical pseudopilin K02460 gspK; general secretion pathway protein K D AYR47_27135 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D AYR47_18810 type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D AYR47_27130 general secretion pathway protein GspL K02461 gspL; general secretion pathway protein L D AYR47_18815 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D AYR47_27125 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D AYR47_27120 general secretion pathway protein GspN K02463 gspN; general secretion pathway protein N D AYR47_11270 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D AYR47_11280 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D AYR47_11275 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D AYR47_11165 pilus assembly protein K02655 pilE; type IV pilus assembly protein PilE D AYR47_01210 pilus assembly protein PilW K02656 pilF; type IV pilus assembly protein PilF D AYR47_04930 pilus assembly protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D AYR47_04925 two-component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D AYR47_04920 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D AYR47_04915 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D AYR47_09215 pilus assembly protein K02662 pilM; type IV pilus assembly protein PilM D AYR47_09220 fimbriae biosynthesis protein K02663 pilN; type IV pilus assembly protein PilN D AYR47_09225 pilus assembly protein K23985 pilOP; type IV pilus assembly protein PilOP D AYR47_09230 pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ D AYR47_04980 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT D AYR47_11150 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D AYR47_11155 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D AYR47_11160 pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX D AYR47_11145 general secretion pathway protein GspH K08084 fimT; type IV fimbrial biogenesis protein FimT D AYR47_27505 peptidoglycan-binding protein K08086 fimV; pilus assembly protein FimV D AYR47_10375 peptidase A24 K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D AYR47_10420 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D AYR47_25980 type II and III secretion system protein RhcC2 K02280 cpaC; pilus assembly protein CpaC D AYR47_10415 secretin K02280 cpaC; pilus assembly protein CpaC D AYR47_10410 pilus assembly protein K02282 cpaE; pilus assembly protein CpaE D AYR47_10405 ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D AYR47_10400 type II secretion system protein F K12510 tadB; tight adherence protein B D AYR47_10395 type II secretion system protein F K12511 tadC; tight adherence protein C D AYR47_10360 hypothetical protein K27080 tadG; tight adherence protein G D AYR47_10425 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA D AYR47_04995 hypothetical protein K02221 yggT; YggT family protein D AYR47_15525 competence protein ComEA K02237 comEA; competence protein ComEA D AYR47_25390 competence protein ComEC K02238 comEC; competence protein ComEC D AYR47_29820 EscC/YscC/HrcC family type III secretion system outer membrane ring protein K03219 yscC; type III secretion protein C D AYR47_10890 EscC/YscC/HrcC family type III secretion system outer membrane ring protein K03219 yscC; type III secretion protein C D AYR47_10835 type III secretion protein K03220 yscD; type III secretion protein D D AYR47_25950 EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein K03222 yscJ; type III secretion protein J D AYR47_10910 EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein K03222 yscJ; type III secretion protein J D AYR47_25940 type III secretion protein K03223 yscL; type III secretion protein L D AYR47_10905 type III secretion protein K03223 yscL; type III secretion protein L D AYR47_25935 fliI; EscN/YscN/HrcN family type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D AYR47_10840 fliI; EscN/YscN/HrcN family type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D AYR47_10845 type III secretion protein K04056 yscO; type III secretion protein O D AYR47_25925 type III secretion protein K03225 yscQ; type III secretion protein Q D AYR47_10855 type III secretion protein K03225 yscQ; type III secretion protein Q D AYR47_25920 ssaR; EscR/YscR/HrcR family type III secretion system export apparatus protein K03226 yscR; type III secretion protein R D AYR47_10860 ssaR; EscR/YscR/HrcR family type III secretion system export apparatus protein K03226 yscR; type III secretion protein R D AYR47_10865 EscS/YscS/HrcS family type III secretion system export apparatus protein K03227 yscS; type III secretion protein S D AYR47_25915 EscS/YscS/HrcS family type III secretion system export apparatus protein K03227 yscS; type III secretion protein S D AYR47_25910 EscT/YscT/HrcT family type III secretion system export apparatus protein K03228 yscT; type III secretion protein T D AYR47_10870 EscT/YscT/HrcT family type III secretion system export apparatus protein K03228 yscT; type III secretion protein T D AYR47_25905 translocation protein in type III secretion system, RhcU K03229 yscU; type III secretion protein U D AYR47_10875 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K03229 yscU; type III secretion protein U D AYR47_10830 EscV/YscV/HrcV family type III secretion system export apparatus protein K03230 yscV; type III secretion protein V D AYR47_25985 EscV/YscV/HrcV family type III secretion system export apparatus protein K03230 yscV; type III secretion protein V D AYR47_10825 SepL/TyeA/HrpJ family type III secretion system gatekeeper K04058 yscW; type III secretion protein W D AYR47_25990 type III secretion protein K04060 yscY; type III secretion protein Y D AYR47_28795 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AYR47_28810 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D AYR47_15955 flagellar biosynthesis protein FlhB K04061 flhB2; flagellar biosynthesis protein D AYR47_28895 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AYR47_28885 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D AYR47_28880 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AYR47_29815 hypothetical protein K02417 fliN; flagellar motor switch protein FliN D AYR47_28835 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D AYR47_28830 flagellar assembly protein FliO K02418 fliO; flagellar protein FliO/FliZ D AYR47_28825 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AYR47_28820 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AYR47_28815 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AYR47_02375 cobyrinic acid a,c-diamide synthase K12055 K12055; chromosome partitioning related protein ParA D AYR47_31370 cobyrinic acid a,c-diamide synthase K12055 K12055; chromosome partitioning related protein ParA D AYR47_00430 relaxase K12070 traI; conjugal transfer pilus assembly protein TraI D AYR47_02585 relaxase K12070 traI; conjugal transfer pilus assembly protein TraI D AYR47_02465 conjugal transfer protein TraG K12071 traD; conjugal transfer pilus assembly protein TraD D AYR47_00330 conjugal transfer protein TraG K12071 traD; conjugal transfer pilus assembly protein TraD D AYR47_00940 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D AYR47_25700 type VI secretion protein K11891 impL; type VI secretion system protein ImpL D AYR47_06225 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D AYR47_24720 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL D AYR47_18195 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL D AYR47_18130 hypothetical protein K11892 impK; type VI secretion system protein ImpK D AYR47_25705 hypothetical protein K11892 impK; type VI secretion system protein ImpK D AYR47_06230 hypothetical protein K11892 impK; type VI secretion system protein ImpK D AYR47_24730 hypothetical protein K11892 impK; type VI secretion system protein ImpK D AYR47_24185 hypothetical protein K11892 impK; type VI secretion system protein ImpK D AYR47_18135 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D AYR47_25710 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D AYR47_06235 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D AYR47_24190 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D AYR47_18145 type VI secretion protein K11895 impH; type VI secretion system protein ImpH D AYR47_25735 type VI secretion protein K11895 impH; type VI secretion system protein ImpH D AYR47_06280 type VI secretion protein K11895 impH; type VI secretion system protein ImpH D AYR47_24220 type VI secretion protein K11895 impH; type VI secretion system protein ImpH D AYR47_25740 type VI secretion system protein ImpG K11896 impG; type VI secretion system protein ImpG D AYR47_06275 type VI secretion system protein ImpG K11896 impG; type VI secretion system protein ImpG D AYR47_24725 type VI secretion protein K11896 impG; type VI secretion system protein ImpG D AYR47_18150 type VI secretion protein K11896 impG; type VI secretion system protein ImpG D AYR47_24225 type VI secretion protein K11896 impG; type VI secretion system protein ImpG D AYR47_25745 type VI secretion system lysozyme K11897 impF; type VI secretion system protein ImpF D AYR47_06270 type VI secretion system lysozyme K11897 impF; type VI secretion system protein ImpF D AYR47_25755 EvpB family type VI secretion protein K11900 impC; type VI secretion system protein ImpC D AYR47_18160 type VI secretion protein K11900 impC; type VI secretion system protein ImpC D AYR47_24235 type VI secretion protein K11900 impC; type VI secretion system protein ImpC D AYR47_25760 hypothetical protein K11901 impB; type VI secretion system protein ImpB D AYR47_06255 hypothetical protein K11901 impB; type VI secretion system protein ImpB D AYR47_18165 type VI secretion protein K11901 impB; type VI secretion system protein ImpB D AYR47_24240 type VI secretion protein K11901 impB; type VI secretion system protein ImpB D AYR47_25765 type VI secretion protein ImpA K11902 impA; type VI secretion system protein ImpA D AYR47_06250 type VI secretion protein ImpA K11902 impA; type VI secretion system protein ImpA D AYR47_18125 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_25750 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_06265 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_19090 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_24250 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D AYR47_17225 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D AYR47_18115 type VI secretion protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D AYR47_25720 type VI secretion protein ImpA K11904 vgrG; type VI secretion system secreted protein VgrG D AYR47_06290 type VI secretion protein ImpA K11904 vgrG; type VI secretion system secreted protein VgrG D AYR47_24735 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D AYR47_09460 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D AYR47_18180 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D AYR47_18155 hypothetical protein K11905 K11905; type VI secretion system protein D AYR47_24230 hypothetical protein K11905 K11905; type VI secretion system protein D AYR47_06240 type VI secretion protein K11906 vasD; type VI secretion system protein VasD D AYR47_24195 type VI secretion protein K11906 vasD; type VI secretion system protein VasD D AYR47_25730 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D AYR47_06285 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D AYR47_24215 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D AYR47_18175 hypothetical protein K11910 vasJ; type VI secretion system protein VasJ D AYR47_24245 type VI secretion protein ImpA K11910 vasJ; type VI secretion system protein VasJ D AYR47_25695 type VI secretion system protein ImpM K11890 impM; type VI secretion system protein ImpM D AYR47_06220 type VI secretion system protein ImpM K11890 impM; type VI secretion system protein ImpM D AYR47_18140 hypothetical protein K11894 impI; type VI secretion system protein ImpI D AYR47_24200 type VI secretion protein K11894 impI; type VI secretion system protein ImpI D AYR47_18170 hypothetical protein K11909 vasI; type VI secretion system protein VasI D AYR47_06210 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D AYR47_25715 phosphopeptide-binding protein K11913 fha1; type VI secretion system protein D AYR47_06245 type VI secretion protein K11913 fha1; type VI secretion system protein D AYR47_24210 Fis family transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator D AYR47_24175 protein phosphatase K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16] D AYR47_06215 serine/threonine protein phosphatase K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16] D AYR47_24170 serine/threonine protein kinase K11916 stk1; serine/threonine-protein kinase Stk1 [EC:2.7.11.-] D AYR47_09110 pilus assembly protein K07345 fimA; major type 1 subunit fimbrin (pilin) D AYR47_27705 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D AYR47_27720 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D AYR47_27735 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D AYR47_26975 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D AYR47_27710 fimbrial protein K07346 fimC; fimbrial chaperone protein D AYR47_26355 molecular chaperone K07346 fimC; fimbrial chaperone protein D AYR47_26980 pilus assembly protein K07346 fimC; fimbrial chaperone protein D AYR47_09120 o-succinylbenzoate--CoA ligase K07347 fimD; outer membrane usher protein D AYR47_27725 fimbrial protein K07347 fimD; outer membrane usher protein D AYR47_26985 fimbrial protein K07347 fimD; outer membrane usher protein D AYR47_26350 fimbrial assembly protein K07347 fimD; outer membrane usher protein D AYR47_26365 spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AYR47_26345 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AYR47_26360 spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AYR47_26370 spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AYR47_26375 spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AYR47_22795 fimbrial assembly protein K12518 papC; outer membrane usher protein PapC D AYR47_22800 molecular chaperone K12519 papD; chaperone protein PapD D AYR47_12775 pilus assembly protein K21965 ecpB; Mat/Ecp fimbriae periplasmic chaperone D AYR47_00585 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AYR47_08835 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AYR47_01290 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AYR47_03820 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AYR47_01285 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AYR47_02185 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AYR47_03660 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AYR47_00980 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AYR47_05070 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AYR47_01295 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AYR47_07060 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AYR47_09065 tatA; preprotein translocase subunit SecA K03116 tatA; sec-independent protein translocase protein TatA D AYR47_09060 tatB; Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D AYR47_09055 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:pazo02042] D AYR47_00990 transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D AYR47_04825 hemolysin III K11068 hlyIII; hemolysin III D AYR47_04760 type III secretion system effector protein exou K16638 exoU; exoenzyme U C 02022 Two-component system [BR:pazo02022] D AYR47_06355 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AYR47_06350 two-component system response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D AYR47_30395 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AYR47_30400 two-component system response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D AYR47_08370 ATPase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AYR47_08365 two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D AYR47_30415 histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D AYR47_30420 two-component system response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D AYR47_00820 two-component system response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D AYR47_31255 two-component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D AYR47_04350 two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D AYR47_04355 two-component system response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D AYR47_12060 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_27410 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_10710 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_15130 ATPase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_00010 ATPase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_06830 ATPase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_12065 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_27405 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_10715 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_15135 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_00015 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_08115 transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_06835 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_01400 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D AYR47_28590 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D AYR47_01405 XRE family transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D AYR47_28595 two-component system response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D AYR47_15570 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D AYR47_15575 two-component system response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D AYR47_14505 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D AYR47_14500 two-component system response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D AYR47_23880 ATPase K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D AYR47_23885 two-component system response regulator K18073 parR; two-component system, OmpR family, response regulator ParR D AYR47_18260 histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D AYR47_18265 two-component system response regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR D AYR47_25400 histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D AYR47_25405 two-component system response regulator K19610 pfeR; two-component system, OmpR family, response regulator PfeR D AYR47_20935 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D AYR47_21325 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D AYR47_16410 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D AYR47_20930 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D AYR47_13830 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D AYR47_01460 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D AYR47_17290 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D AYR47_29810 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D AYR47_00720 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D AYR47_19535 histidine kinase K02483 K02483; two-component system, OmpR family, response regulator D AYR47_26955 hybrid sensor histidine kinase/response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D AYR47_26965 hybrid sensor histidine kinase/response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D AYR47_12375 two-component system response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D AYR47_09140 LuxR family transcriptional regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D AYR47_25410 hybrid sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D AYR47_18070 two-component system response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D AYR47_17390 LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D AYR47_27690 hybrid sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D AYR47_15865 hybrid sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D AYR47_17895 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_13070 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_27695 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_27745 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_15870 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_10365 PAS domain-containing sensor histidine kinase K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3] D AYR47_10380 LuxR family transcriptional regulator K27077 pprB; two-component system, NarL family, response regulator PprB D AYR47_05850 two-component system response regulator K08083 algR; two-component system, LytTR family, response regulator AlgR D AYR47_08855 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AYR47_08850 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D AYR47_02085 Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D AYR47_08485 ATPase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D AYR47_00680 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D AYR47_08480 Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D AYR47_00685 C4-dicarboxylate ABC transporter K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D AYR47_07510 PAS domain-containing sensor histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3] D AYR47_07515 two-component system response regulator K11384 algB; two-component system, NtrC family, response regulator AlgB D AYR47_28765 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYR47_28775 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYR47_22560 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AYR47_28760 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AYR47_12105 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYR47_30460 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYR47_28690 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYR47_04910 hybrid sensor histidine kinase/response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D AYR47_04930 pilus assembly protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D AYR47_04925 two-component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D AYR47_13320 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D AYR47_13330 diguanylate cyclase response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D AYR47_13325 chemotaxis response regulator protein-glutamate methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D AYR47_01450 histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D AYR47_22245 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK D AYR47_22550 hypothetical protein K13589 cpdR; two-component system, cell cycle response regulator CpdR D AYR47_28910 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D AYR47_28905 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D AYR47_12965 histidine kinase K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3] D AYR47_12960 Fis family transcriptional regulator K17061 aauR; two-component system, response regulator AauR D AYR47_11470 histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D AYR47_11475 two-component system response regulator K15012 regA; two-component system, response regulator RegA D AYR47_15850 hybrid sensor histidine kinase/response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D AYR47_17375 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D AYR47_28860 histidine kinase K20976 hptB; histidine phosphotransfer protein HptB D AYR47_28865 fused response regulator/phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D AYR47_29825 nitrate transporter K22067 nasS; two-component system, oxyanion-binding sensor D AYR47_29830 histidine kinase K07183 nasT; two-component system, response regulator / RNA-binding antiterminator D AYR47_03075 hybrid sensor histidine kinase/response regulator K20971 ladS; two-component system, sensor histidine kinase LadS D AYR47_10235 hybrid sensor histidine kinase/response regulator K20972 retS; two-component system, sensor histidine kinase RetS C 02035 Bacterial motility proteins [BR:pazo02035] D AYR47_28765 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYR47_28735 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYR47_28740 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYR47_22565 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AYR47_30455 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AYR47_22560 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AYR47_28760 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AYR47_28775 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYR47_28770 protein phosphatase K03414 cheZ; chemotaxis protein CheZ D AYR47_12105 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYR47_30460 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYR47_28690 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYR47_07680 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_21670 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_17300 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_17310 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_22425 histidine kinase K03406 mcp; methyl-accepting chemotaxis protein D AYR47_23290 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_23410 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_24545 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_29435 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_23615 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_09040 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_09045 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_00600 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_09430 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_00765 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_18490 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_30735 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_30790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_19170 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_01760 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_10730 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_19760 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_02360 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_11320 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_16435 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_20860 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYR47_29455 chemotaxis protein K03776 aer; aerotaxis receptor D AYR47_23540 chemotaxis protein K03776 aer; aerotaxis receptor D AYR47_12090 chemotaxis protein K03776 aer; aerotaxis receptor D AYR47_28885 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D AYR47_28880 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AYR47_28875 flagellar protein FliJ K02413 fliJ; flagellar protein FliJ D AYR47_28830 flagellar assembly protein FliO K02418 fliO; flagellar protein FliO/FliZ D AYR47_28825 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AYR47_28820 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AYR47_28815 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AYR47_28795 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AYR47_28810 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D AYR47_28890 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AYR47_28840 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AYR47_29815 hypothetical protein K02417 fliN; flagellar motor switch protein FliN D AYR47_28835 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D AYR47_28895 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AYR47_28965 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D AYR47_30465 flagellar biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D AYR47_28970 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D AYR47_05630 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D AYR47_28845 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D AYR47_28900 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D AYR47_28850 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D AYR47_30450 flgB; flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D AYR47_30445 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D AYR47_30440 flagellar biosynthesis protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D AYR47_28980 flgF; flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D AYR47_28975 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D AYR47_28960 flagellar biosynthesis protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D AYR47_30435 flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE D AYR47_28955 flgK; flagellar biosynthesis protein FlgK K02396 flgK; flagellar hook-associated protein 1 D AYR47_28950 flgL; flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D AYR47_30475 flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D AYR47_13060 hypothetical protein K21218 motY; sodium-type flagellar protein MotY D AYR47_28940 branched-chain alpha-keto acid dehydrogenase subunit E2 K02406 fliC; flagellin D AYR47_28930 flagellar cap protein FliD K02407 fliD; flagellar hook-associated protein 2 D AYR47_28925 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D AYR47_28920 flagellar assembly protein FliT K02423 fliT; flagellar protein FliT D AYR47_28780 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D AYR47_28755 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D AYR47_09735 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AYR47_28750 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D AYR47_09740 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D AYR47_28915 AAA family ATPase K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D AYR47_28910 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D AYR47_28905 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D AYR47_08280 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D AYR47_05340 ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D AYR47_30470 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D AYR47_28935 flagellar biosynthesis protein FlaG K06603 flaG; flagellar protein FlaG D AYR47_28790 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D AYR47_28785 cobyrinic acid a,c-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D AYR47_04930 pilus assembly protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D AYR47_04925 two-component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D AYR47_04920 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D AYR47_04915 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D AYR47_04910 hybrid sensor histidine kinase/response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D AYR47_04980 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT D AYR47_22955 transcriptional regulator K06599 chpD; AraC family transcriptional regulator, chemosensory pili system protein ChpD D AYR47_22960 chemotaxis protein K06600 chpE; chemosensory pili system protein ChpE D AYR47_11280 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D AYR47_11275 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D AYR47_11270 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D AYR47_01210 pilus assembly protein PilW K02656 pilF; type IV pilus assembly protein PilF D AYR47_09230 pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ D AYR47_09225 pilus assembly protein K23985 pilOP; type IV pilus assembly protein PilOP D AYR47_09220 fimbriae biosynthesis protein K02663 pilN; type IV pilus assembly protein PilN D AYR47_09215 pilus assembly protein K02662 pilM; type IV pilus assembly protein PilM D AYR47_11150 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D AYR47_11155 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D AYR47_11160 pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX D AYR47_11165 pilus assembly protein K02655 pilE; type IV pilus assembly protein PilE D AYR47_10425 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA D AYR47_10375 peptidase A24 K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D AYR47_10420 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D AYR47_25980 type II and III secretion system protein RhcC2 K02280 cpaC; pilus assembly protein CpaC D AYR47_10415 secretin K02280 cpaC; pilus assembly protein CpaC D AYR47_10410 pilus assembly protein K02282 cpaE; pilus assembly protein CpaE D AYR47_10405 ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D AYR47_09110 pilus assembly protein K07345 fimA; major type 1 subunit fimbrin (pilin) D AYR47_27705 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D AYR47_27720 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D AYR47_27735 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D AYR47_26975 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D AYR47_27710 fimbrial protein K07346 fimC; fimbrial chaperone protein D AYR47_26355 molecular chaperone K07346 fimC; fimbrial chaperone protein D AYR47_26980 pilus assembly protein K07346 fimC; fimbrial chaperone protein D AYR47_09120 o-succinylbenzoate--CoA ligase K07347 fimD; outer membrane usher protein D AYR47_27725 fimbrial protein K07347 fimD; outer membrane usher protein D AYR47_26985 fimbrial protein K07347 fimD; outer membrane usher protein D AYR47_26350 fimbrial assembly protein K07347 fimD; outer membrane usher protein D AYR47_26365 spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AYR47_26345 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AYR47_26360 spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AYR47_26370 spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D AYR47_26375 spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:pazo04812] D AYR47_11625 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AYR47_12040 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AYR47_12035 cell division protein FtsA K03590 ftsA; cell division protein FtsA D AYR47_28540 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D AYR47_28545 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D AYR47_28550 cell division topological specificity factor K03608 minE; cell division topological specificity factor D AYR47_28745 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein D AYR47_09390 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein D AYR47_07040 chromosome partitioning protein K03496 parA; chromosome partitioning protein D AYR47_07035 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:pazo04147] D AYR47_13655 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AYR47_15090 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AYR47_00735 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AYR47_04695 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AYR47_16145 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYR47_00660 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYR47_29370 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D AYR47_04485 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AYR47_13045 alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D AYR47_00830 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AYR47_02250 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AYR47_02110 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AYR47_01135 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AYR47_03765 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AYR47_03935 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AYR47_26155 diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AYR47_25120 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D AYR47_31025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_31030 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_24080 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_16375 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AYR47_03370 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_30110 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_22515 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_17715 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_24085 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_10455 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AYR47_04770 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AYR47_13410 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AYR47_29570 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D AYR47_24645 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AYR47_05855 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AYR47_30655 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AYR47_13065 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AYR47_23530 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D AYR47_17515 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D AYR47_12420 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D AYR47_08905 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AYR47_21155 glycogen-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D AYR47_13000 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D AYR47_08870 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_17780 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_05425 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_05435 gamma-glutamylputrescine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_14840 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_19630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYR47_05735 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AYR47_17690 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AYR47_22715 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D AYR47_28995 phhB; 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D AYR47_05330 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AYR47_10245 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AYR47_17580 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_16265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYR47_30180 electron transfer flavoprotein subunit beta K03522 fixB; electron transfer flavoprotein alpha subunit D AYR47_31070 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AYR47_20295 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AYR47_02190 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AYR47_08915 lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:pazo02048] D AYR47_29685 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D AYR47_02595 hypothetical protein K07448 mrr; restriction system protein D AYR47_00185 toxin ChpB K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D AYR47_00190 PbsX family transcriptional regulator K18842 chpS; antitoxin ChpS D AYR47_15235 AbrB family transcriptional regulator K19156 prlF; antitoxin PrlF D AYR47_05190 bifunctional antitoxin/transcriptional repressor RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D AYR47_13220 addiction module antitoxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D AYR47_13225 toxin-antitoxin system protein K07473 dinJ; DNA-damage-inducible protein J D AYR47_01505 toxin YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-] D AYR47_01500 prevent-host-death protein K19159 yefM; antitoxin YefM D AYR47_01115 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D AYR47_09275 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D AYR47_04495 transcriptional regulator K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D AYR47_09270 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D AYR47_01120 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D AYR47_00425 plasmid stabilization protein ParE K19092 parE1_3_4; toxin ParE1/3/4 D AYR47_14345 plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4 D AYR47_14695 plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4 D AYR47_14700 CopG family transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4 D AYR47_09405 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D AYR47_12855 proteic killer protein K07334 higB-1; toxin HigB-1 D AYR47_09410 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D AYR47_12860 XRE family transcriptional regulator K21498 higA-1; antitoxin HigA-1 D AYR47_04900 XRE family transcriptional regulator K21498 higA-1; antitoxin HigA-1 D AYR47_12305 motility quorum-sensing regulator MqsR K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin D AYR47_12300 transcriptional regulator K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA D AYR47_12040 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AYR47_11625 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AYR47_09700 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AYR47_09690 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AYR47_27605 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AYR47_14525 hypothetical protein K19168 cptA; toxin CptA D AYR47_14520 hypothetical protein K09159 cptB; antitoxin CptB D AYR47_01255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AYR47_16890 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AYR47_02640 DNA sulfur modification protein DndB K19169 dndB; DNA sulfur modification protein DndB D AYR47_02635 sulfurtransferase DndC K19170 dndC; DNA sulfur modification protein DndC D AYR47_02630 DNA sulfur modification protein DndD K19171 dndD; DNA sulfur modification protein DndD C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:pazo01504] D AYR47_31190 hypothetical protein K18555 qnr; fluoroquinolone resistance protein D AYR47_23880 ATPase K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D AYR47_23885 two-component system response regulator K18073 parR; two-component system, OmpR family, response regulator ParR D AYR47_12060 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_27410 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_10710 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_15130 ATPase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_00010 ATPase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_06830 ATPase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D AYR47_12065 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_27405 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_10715 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_15135 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_00015 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_08115 transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_06835 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D AYR47_21995 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D AYR47_19600 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D AYR47_14750 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D AYR47_25080 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D AYR47_00545 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D AYR47_22315 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D AYR47_00890 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D AYR47_30395 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AYR47_30400 two-component system response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D AYR47_20925 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYR47_14125 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYR47_20920 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D AYR47_14120 multidrug transporter K18138 acrB; multidrug efflux pump D AYR47_26765 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D AYR47_14115 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D AYR47_21820 efflux transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system D AYR47_21815 transporter K18299 mexF; multidrug efflux pump D AYR47_21810 RND transporter K18300 oprN; outer membrane protein, multidrug efflux system D AYR47_13450 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D AYR47_13455 efflux transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D AYR47_13460 multidrug transporter AcrB K18303 mexK; multidrug efflux pump D AYR47_10465 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D AYR47_03415 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D AYR47_18260 histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D AYR47_18265 two-component system response regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR D AYR47_09650 channel protein TolC K12340 tolC; outer membrane protein D AYR47_26045 hypothetical protein K12340 tolC; outer membrane protein D AYR47_17895 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_13070 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_27695 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_27745 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_15870 LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D AYR47_23280 transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D AYR47_18960 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D AYR47_10740 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:pazo00536] D AYR47_07845 hypothetical protein K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pazo00537] D AYR47_04485 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:pazo03100] D AYR47_01965 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_07660 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_16940 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_27600 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_03870 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_10575 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_27590 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_01325 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYR47_30490 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYR47_30515 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYR47_26510 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYR47_08045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYR47_30520 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYR47_11200 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AYR47_28200 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AYR47_16665 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AYR47_16640 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AYR47_27445 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AYR47_27450 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AYR47_23230 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D AYR47_10945 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AYR47_16470 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AYR47_27585 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AYR47_27595 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AYR47_16450 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AYR47_16460 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AYR47_16465 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYR47_16475 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYR47_14435 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYR47_03835 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYR47_16455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYR47_18085 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYR47_26495 tRNA-His K14226 tRNA-His; tRNA His D AYR47_26505 tRNA-His K14226 tRNA-His; tRNA His D AYR47_01970 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYR47_03875 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYR47_07655 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYR47_10570 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYR47_16935 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYR47_01330 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYR47_09835 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYR47_01310 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYR47_26500 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYR47_02180 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYR47_23030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYR47_09840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYR47_00440 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AYR47_11210 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AYR47_00880 tRNA-Met K14230 tRNA-Met; tRNA Met D AYR47_04150 tRNA-Met K14230 tRNA-Met; tRNA Met D AYR47_02175 tRNA-Met K14230 tRNA-Met; tRNA Met D AYR47_10815 tRNA-Met K14230 tRNA-Met; tRNA Met D AYR47_00885 tRNA-Met K14230 tRNA-Met; tRNA Met D AYR47_08745 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AYR47_11205 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AYR47_11215 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AYR47_27255 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AYR47_30525 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AYR47_14610 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AYR47_30080 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AYR47_25345 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AYR47_03830 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AYR47_08625 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AYR47_11290 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AYR47_03825 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AYR47_03840 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AYR47_16635 tRNA-Val K14237 tRNA-Val; tRNA Val D AYR47_27435 tRNA-Val K14237 tRNA-Val; tRNA Val D AYR47_27455 tRNA-Val K14237 tRNA-Val; tRNA Val D AYR47_16660 tRNA-Val K14237 tRNA-Val; tRNA Val D AYR47_16930 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_03880 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_10565 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_07650 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_01975 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_01335 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AYR47_10580 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_01960 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_01320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_16945 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_07665 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_03865 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AYR47_10585 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_01315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_01955 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_16950 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_07670 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_07675 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_03860 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYR47_29650 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D AYR47_29720 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D AYR47_11965 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D AYR47_02310 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D AYR47_04530 3-hydroxybutyryl-CoA dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108] D AYR47_17910 dkgB; 2,5-diketo-D-gluconic acid reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D AYR47_08325 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D AYR47_04000 alcohol dehydrogenase K19954 adh1; alcohol dehydrogenase [EC:1.1.1.-] D AYR47_26650 iditol 2-dehydrogenase K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-] D AYR47_24400 iditol 2-dehydrogenase K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-] D AYR47_21765 oxidoreductase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D AYR47_21270 alcohol dehydrogenase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D AYR47_05105 coniferyl-aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D AYR47_26420 fadH; NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D AYR47_24665 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D AYR47_29585 2-alkenal reductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D AYR47_04190 pyrroloquinoline quinone biosynthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D AYR47_24635 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D AYR47_18305 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D AYR47_24630 aldehyde dehydrogenase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D AYR47_18300 isoquinoline 1-oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D AYR47_30190 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D AYR47_11050 FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5] D AYR47_07180 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AYR47_19565 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AYR47_05635 NADPH:quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AYR47_16905 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AYR47_28180 NADPH:quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AYR47_18740 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AYR47_19040 oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AYR47_01805 NADPH quinone reductase MdaB K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D AYR47_29350 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D AYR47_21525 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D AYR47_21705 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D AYR47_20105 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D AYR47_22750 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D AYR47_22840 cytochrome C K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D AYR47_01495 cytochrome C K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D AYR47_09475 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D AYR47_22140 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D AYR47_28050 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D AYR47_22130 methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D AYR47_15835 peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D AYR47_13800 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D AYR47_17680 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D AYR47_21580 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D AYR47_18660 glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D AYR47_25500 glutathione-dependent reductase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D AYR47_01985 mononuclear molybdenum enzyme YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D AYR47_26410 cytochrome B K12262 cybB; superoxide oxidase [EC:1.10.3.17] D AYR47_18745 arylesterase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D AYR47_14580 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D AYR47_21085 tpx; lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D AYR47_05475 peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D AYR47_22755 alkyl hydroperoxide reductase K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D AYR47_07280 osmotically inducible protein OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D AYR47_15760 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D AYR47_26015 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D AYR47_19575 quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D AYR47_22020 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D AYR47_21380 quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D AYR47_19385 cysteine dioxygenase K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91] D AYR47_13820 PKHD-type hydroxylase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D AYR47_11370 PKHD-type hydroxylase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D AYR47_01565 nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D AYR47_26560 ornithine monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196] D AYR47_20415 ring-hydroxylating oxygenase subunit alpha K22443 cntA; carnitine monooxygenase subunit [EC:1.14.13.239] D AYR47_20420 ferredoxin--NADP(+) reductase K22444 cntB; carnitine monooxygenase subunit [EC:1.14.13.239] D AYR47_08250 N5,N10-methylene tetrahydromethanopterin reductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D AYR47_26090 5,10-methylene tetrahydromethanopterin reductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D AYR47_27025 oxidoreductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D AYR47_27180 nitrilotriacetate monooxygenase K24116 scmK; N-acetyl-S-(2-succino)cysteine monooxygenase [EC:1.14.-.-] D AYR47_00265 mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D AYR47_13190 ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D AYR47_02780 ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D AYR47_00090 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D AYR47_06910 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D AYR47_25435 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D AYR47_12535 NrdH-redoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3] D AYR47_22945 ArsC family transcriptional regulator K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D AYR47_06920 ArsC family transcriptional regulator K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D AYR47_00100 ArsC family transcriptional regulator K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D AYR47_04200 pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D AYR47_13700 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D AYR47_06665 fatty acid methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D AYR47_11005 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D AYR47_03600 trans-aconitate methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D AYR47_09550 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D AYR47_04855 malonate decarboxylase subunit epsilon K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39] D AYR47_23215 GNAT family acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D AYR47_24800 acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D AYR47_19450 lipopolysaccharide biosynthesis protein K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D AYR47_25790 N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D AYR47_29415 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D AYR47_03125 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D AYR47_14155 glycerol acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D AYR47_17495 GNAT family acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D AYR47_13210 acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D AYR47_10095 acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D AYR47_25535 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D AYR47_25540 arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D AYR47_04880 triphosphoribosyl-dephospho-CoA synthase MdcB K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D AYR47_13170 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D AYR47_29225 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D AYR47_05260 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D AYR47_29890 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D AYR47_28300 polyphosphate kinase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D AYR47_09495 bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D AYR47_04860 phosphoribosyl-dephospho-CoA transferase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D AYR47_09415 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D AYR47_29430 bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D AYR47_00910 CoA-transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D AYR47_18210 CoA-transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D AYR47_14320 carnitine dehydratase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D AYR47_12935 alpha/beta hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D AYR47_09155 poly(3-hydroxyalkanoate) depolymerase K22250 phaZ; poly(3-hydroxyoctanoate) depolymerase [EC:3.1.1.76] D AYR47_04535 4-hydroxybenzoyl-CoA thioesterase K27492 cdhB; betainyl-CoA thioesterase [EC:3.1.2.33] D AYR47_08430 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AYR47_27570 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AYR47_09340 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AYR47_31235 phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D AYR47_16370 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D AYR47_22730 diguanylate phosphodiesterase K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D AYR47_07205 choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6] D AYR47_27370 deoxyribonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D AYR47_30290 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D AYR47_15620 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D AYR47_11330 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D AYR47_08650 endoglucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4] D AYR47_28585 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AYR47_01770 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D AYR47_07160 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D AYR47_31005 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D AYR47_23235 acyl-homoserine lactone acylase subunit beta K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D AYR47_13795 acyl-homoserine lactone acylase subunit beta K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D AYR47_12840 carbon-nitrogen hydrolase K18540 ramA; (R)-amidase [EC:3.5.1.100] D AYR47_15300 amino acid amidase K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101] D AYR47_12665 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D AYR47_11655 carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D AYR47_15450 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-] D AYR47_10525 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D AYR47_25180 translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D AYR47_30350 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D AYR47_22595 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D AYR47_23855 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D AYR47_24000 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D AYR47_00640 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D AYR47_08165 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D AYR47_23640 UV damage repair endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-] D AYR47_04870 biotin-independent malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D AYR47_04865 biotin-independent malonate decarboxylase subunit gamma K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87] D AYR47_09765 carbohydrate kinase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D AYR47_18535 PLP-dependent lyase/thiolase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D AYR47_21425 serine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] D AYR47_13520 cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-] D AYR47_00245 alkylmercury lyase K00221 E4.99.1.2; alkylmercury lyase [EC:4.99.1.2] D AYR47_21450 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D AYR47_31110 sugar isomerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31] D AYR47_20530 feruloyl-CoA synthase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34] D AYR47_03280 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D AYR47_13085 (4Fe-4S)-binding protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D AYR47_29540 carbonate dehydratase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D AYR47_05245 ATPase P K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D AYR47_17885 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] D AYR47_22970 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism D AYR47_02060 sugar fermentation stimulation protein SfsA K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D AYR47_08445 formate dehydrogenase accessory protein FdhD K02379 fdhD; FdhD protein D AYR47_13100 ferredoxin K05524 fdxA; ferredoxin D AYR47_01630 flavodoxin K06205 mioC; MioC protein D AYR47_01250 scaffolding protein K04488 iscU; nitrogen fixation protein NifU and related proteins D AYR47_30185 electron transporter RnfB K03521 fixA; electron transfer flavoprotein beta subunit D AYR47_07265 dodecin flavoprotein K09165 K09165; dodecin C 99983 Lipid metabolism D AYR47_03070 DNA alkylation response protein K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D AYR47_01685 sulfate transporter CysZ K06203 cysZ; CysZ protein D AYR47_04985 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein D AYR47_17005 GCN5 family acetyltransferase K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D AYR47_12215 alginate biosynthesis protein K19292 algK; alginate biosynthesis protein AlgK D AYR47_03575 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D AYR47_08645 cellulose synthase regulator BcsB K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D AYR47_20185 cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW D AYR47_05830 heme biosynthesis protein HemY K02498 hemY; HemY protein D AYR47_09080 ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein D AYR47_09085 sterol-binding protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D AYR47_05935 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D AYR47_20200 magnesium chelatase K13580 K13580; magnesium chelatase subunit ChlD-like protein C 99988 Secondary metabolism D AYR47_20100 ACP phosphodiesterase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D AYR47_23505 GDSL family lipase K21831 choE; cholinesterase D AYR47_08305 DoxX family protein K15977 K15977; putative oxidoreductase D AYR47_25880 DoxX family protein K15977 K15977; putative oxidoreductase D AYR47_13935 hypothetical protein K15977 K15977; putative oxidoreductase D AYR47_15630 DoxX family protein K15977 K15977; putative oxidoreductase D AYR47_12275 carboxylesterase K06999 K06999; phospholipase/carboxylesterase D AYR47_18935 phospholipase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D AYR47_13485 cold shock domain protein CspD K03704 cspA; cold shock protein D AYR47_28800 cold-shock protein K03704 cspA; cold shock protein D AYR47_28805 DNA-binding protein K03704 cspA; cold shock protein D AYR47_00530 cold-shock protein K03704 cspA; cold shock protein D AYR47_13715 cold-shock protein K03704 cspA; cold shock protein D AYR47_25560 cold-shock protein K03704 cspA; cold shock protein D AYR47_27305 DNA-binding protein K03704 cspA; cold shock protein D AYR47_31335 cold-shock protein K03704 cspA; cold shock protein D AYR47_05820 transcriptional regulator K07740 rsd; regulator of sigma D D AYR47_05930 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D AYR47_08360 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D AYR47_05615 multidrug ABC transporter ATP-binding protein K13926 rbbA; ribosome-dependent ATPase D AYR47_13790 DNA ligase-associated DEXH box helicase K07577 K07577; putative mRNA 3-end processing factor C 99975 Protein processing D AYR47_25425 hypothetical protein K03668 hslJ; heat shock protein HslJ D AYR47_25555 ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D AYR47_26490 trigger factor K03545 tig; trigger factor D AYR47_01980 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D AYR47_10000 urease accessory protein UreE K03187 ureE; urease accessory protein D AYR47_09995 urease accessory protein UreF K03188 ureF; urease accessory protein D AYR47_09990 urease accessory protein UreG K03189 ureG; urease accessory protein D AYR47_10105 urease accessory protein UreD K03190 ureD; urease accessory protein D AYR47_09985 protein hupE K03192 ureJ; urease accessory protein D AYR47_02285 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D AYR47_05940 magnesium chelatase K07391 comM; magnesium chelatase family protein D AYR47_05350 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D AYR47_28265 disulfide bond formation protein DsbA K07396 K07396; putative protein-disulfide isomerase D AYR47_03955 peroxiredoxin K07397 yhfA; putative redox protein D AYR47_16320 peroxiredoxin K07397 yhfA; putative redox protein D AYR47_20160 Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D AYR47_29025 selenoprotein K07401 K07401; selenoprotein W-related protein D AYR47_29760 molybdenum cofactor sulfurylase K07402 xdhC; xanthine dehydrogenase accessory factor D AYR47_30380 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor D AYR47_17010 glutathione S-transferase K11208 yncG; GST-like protein C 99976 Replication and repair D AYR47_00855 DNA base-flipping protein YbaZ K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D AYR47_02430 DNA repair protein RadC K03630 radC; DNA repair protein RadC D AYR47_06065 hypothetical protein K03630 radC; DNA repair protein RadC D AYR47_29060 recombinase RmuC K09760 rmuC; DNA recombination protein RmuC D AYR47_11950 hypothetical protein K07460 yraN; putative endonuclease D AYR47_12390 GIY-YIG nuclease K07461 K07461; putative endonuclease D AYR47_07170 DNA processing protein DprA K04096 smf; DNA processing protein D AYR47_25520 recombination factor protein RarA K07478 ycaJ; putative ATPase D AYR47_29705 DNA invertase K14060 pinR; putative DNA-invertase from lambdoid prophage Rac D AYR47_08000 topoisomerase K06919 K06919; putative DNA primase/helicase D AYR47_07995 RNA helicase K06919 K06919; putative DNA primase/helicase D AYR47_03390 transposase K07483 K07483; transposase D AYR47_20970 transposase K07483 K07483; transposase D AYR47_18095 transposase K07483 K07483; transposase D AYR47_29500 transposase K07483 K07483; transposase D AYR47_19610 transposase K07483 K07483; transposase D AYR47_02990 transposase K07483 K07483; transposase D AYR47_20730 transposase K07483 K07483; transposase D AYR47_27000 transposase K07483 K07483; transposase D AYR47_28720 transposase K07483 K07483; transposase D AYR47_30055 transposase K07483 K07483; transposase D AYR47_17790 transposase K07491 rayT; REP-associated tyrosine transposase D AYR47_03950 transposase K07497 K07497; putative transposase D AYR47_29505 transposase K07497 K07497; putative transposase D AYR47_10605 transposase K07497 K07497; putative transposase D AYR47_27910 transposase K07497 K07497; putative transposase D AYR47_30060 transposase K07497 K07497; putative transposase D AYR47_18090 transposase K07497 K07497; putative transposase D AYR47_14560 transposase K07497 K07497; putative transposase D AYR47_03385 transposase K07497 K07497; putative transposase D AYR47_02985 transposase K07497 K07497; putative transposase D AYR47_11935 transposase K07497 K07497; putative transposase D AYR47_16185 transposase K07497 K07497; putative transposase D AYR47_20725 transposase K07497 K07497; putative transposase D AYR47_20965 transposase K07497 K07497; putative transposase D AYR47_26995 transposase K07497 K07497; putative transposase D AYR47_28715 transposase K07497 K07497; putative transposase D AYR47_19605 transposase K07497 K07497; putative transposase D AYR47_20385 hypothetical protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D AYR47_29590 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D AYR47_04755 hypothetical protein K21990 yfdC; formate-nitrite transporter family protein D AYR47_12810 D-alanine/D-serine/glycine permease K03293 TC.AAT; amino acid transporter, AAT family D AYR47_01820 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D AYR47_07580 citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D AYR47_24695 citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D AYR47_28450 citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D AYR47_30800 nuclease PIN K03306 TC.PIT; inorganic phosphate transporter, PiT family D AYR47_29250 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D AYR47_06450 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D AYR47_16280 branched-chain amino acid ABC transporter substrate-binding protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D AYR47_16625 sodium transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D AYR47_29270 nitrate reductase K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D AYR47_17520 nitrate reductase K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D AYR47_08945 sulfonate ABC transporter substrate-binding protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D AYR47_29985 nitrate reductase K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D AYR47_24785 allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D AYR47_30255 allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D AYR47_09660 nitrate reductase K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D AYR47_20435 allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D AYR47_17795 hypothetical protein K23243 rcnB; nickel/cobalt homeostasis protein C 99978 Cell growth D AYR47_31240 septation protein A K06190 ispZ; intracellular septation protein D AYR47_18940 hypothetical protein K27311 dcrB; inner membrane lipoprotein DcrB D AYR47_08815 peptidase M23 K22719 envC; murein hydrolase activator C 99993 Cell motility D AYR47_05775 penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator D AYR47_02035 competence protein TfoX K07343 tfoX; DNA transformation protein and related proteins D AYR47_09125 pilus assembly protein K15540 ecpD; chaperone protein EcpD D AYR47_09130 pilus assembly protein K15540 ecpD; chaperone protein EcpD D AYR47_27730 pilus assembly protein K15540 ecpD; chaperone protein EcpD C 99995 Signaling proteins D AYR47_11315 hypothetical protein K03807 ampE; AmpE protein D AYR47_15015 universal stress protein UspA K06149 uspA; universal stress protein A D AYR47_23900 universal stress protein UspA K14055 uspE; universal stress protein E D AYR47_08880 GTP-binding protein TypA K06207 typA; GTP-binding protein D AYR47_22490 hypothetical protein K07168 K07168; CBS domain-containing membrane protein D AYR47_03110 ATP-binding protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D AYR47_12245 ATPase K07175 phoH2; PhoH-like ATPase D AYR47_04090 PrkA family serine protein kinase K07180 prkA; serine protein kinase D AYR47_04310 cyclic nucleotide-binding protein K07182 K07182; CBS domain-containing protein D AYR47_22535 circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC D AYR47_00555 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D AYR47_25525 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D AYR47_10955 lipoprotein localization factor LolB K02494 lolB; outer membrane lipoprotein LolB D AYR47_15160 hypothetical protein K04754 mlaA; phospholipid-binding lipoprotein MlaA D AYR47_01465 ABC transporter K04754 mlaA; phospholipid-binding lipoprotein MlaA D AYR47_13900 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB D AYR47_13600 hypothetical protein K06142 hlpA; outer membrane protein D AYR47_13705 peptigoglycan-binding protein LysM K06194 nlpD; lipoprotein NlpD D AYR47_25320 glycosyl hydrolase family 25 K07273 acm; lysozyme D AYR47_03550 hypothetical protein K07275 ompW; outer membrane protein D AYR47_11835 hypothetical protein K07286 yajG; uncharacterized lipoprotein D AYR47_08760 cell envelope biogenesis protein AsmA K07289 asmA; AsmA protein D AYR47_10020 hypothetical protein K07290 yhjG; AsmA family protein D AYR47_05525 hypothetical protein K07340 ybbJ; inner membrane protein D AYR47_26050 transporter K02005 ABC.CD.TX; HlyD family secretion protein D AYR47_04345 hypothetical protein K06143 creD; inner membrane protein D AYR47_15985 cytochrome c biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D AYR47_16000 cytochrome C K02200 ccmH; cytochrome c-type biogenesis protein CcmH D AYR47_16005 c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D AYR47_01205 Cro/Cl family transcriptional regulator K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D AYR47_06375 transcriptional regulator PhoU K02039 phoU; phosphate transport system protein D AYR47_13040 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin D AYR47_09010 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D AYR47_16080 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein D AYR47_04075 Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D AYR47_05890 iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D AYR47_24760 FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D AYR47_28035 FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D AYR47_31155 peptidase K07231 K07231; putative iron-regulated protein D AYR47_29310 copper resistance protein CopB K07233 pcoB; copper resistance protein B D AYR47_00050 copper resistance protein CopB K07233 pcoB; copper resistance protein B D AYR47_06870 copper resistance protein CopB K07233 pcoB; copper resistance protein B B B 09194 Poorly characterized C 99996 General function prediction only D AYR47_12955 hypothetical protein K02442 glpM; membrane protein GlpM D AYR47_27475 colicin V production CvpA K03558 cvpA; membrane protein required for colicin V production D AYR47_13135 lysozyme K03791 K03791; putative chitinase D AYR47_10600 mammalian cell entry protein K06192 pqiB; paraquat-inducible protein B D AYR47_04635 acyltransferase K02348 elaA; ElaA protein D AYR47_02135 ornithine aminotransferase K04065 osmY; hyperosmotically inducible periplasmic protein D AYR47_04185 pyrroloquinoline quinone biosynthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D AYR47_04195 coenzyme PQQ synthesis protein D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D AYR47_12720 globin K06886 glbN; hemoglobin D AYR47_15580 alpha/beta hydrolase K07001 K07001; NTE family protein D AYR47_28530 Patatin K07001 K07001; NTE family protein D AYR47_29030 hypothetical protein K07001 K07001; NTE family protein D AYR47_03900 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D AYR47_31010 ribonuclease BN K07058 K07058; membrane protein D AYR47_00840 exclusion suppressor FxsA K07113 fxsA; UPF0716 protein FxsA D AYR47_13515 Fe-S metabolism protein SufE K02426 sufE; cysteine desulfuration protein SufE D AYR47_28270 hypothetical protein K07146 K07146; UPF0176 protein D AYR47_25590 DNA repair protein K07153 hflD; high frequency lysogenization protein D AYR47_16830 glyoxalase K04750 phnB; PhnB protein D AYR47_00095 NADPH-dependent FMN reductase K11811 arsH; arsenical resistance protein ArsH D AYR47_22950 NADPH-dependent FMN reductase K11811 arsH; arsenical resistance protein ArsH D AYR47_06915 NADPH-dependent FMN reductase K11811 arsH; arsenical resistance protein ArsH D AYR47_14240 hypothetical protein K03744 lemA; LemA protein D AYR47_06770 hypothetical protein K03744 lemA; LemA protein D AYR47_00535 hypothetical protein K03745 slyX; SlyX protein D AYR47_01705 hypothetical protein K05805 creA; CreA protein D AYR47_25465 SprT family protein K02742 sprT; SprT protein D AYR47_27480 cell division protein K03749 dedD; DedD protein D AYR47_09245 cell division protein K03112 damX; DamX protein D AYR47_03315 hypothetical protein K03975 dedA; membrane-associated protein D AYR47_10590 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D AYR47_10595 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D AYR47_13920 hypothetical protein K08985 K08985; putative lipoprotein D AYR47_14250 hypothetical protein K08988 K08988; putative membrane protein D AYR47_14365 DUF305 domain-containing protein K08995 K08995; putative membrane protein D AYR47_13850 hypothetical protein K09858 K09858; SEC-C motif domain protein D AYR47_13475 hypothetical protein K09914 K09914; putative lipoprotein D AYR47_01735 alkylphosphonate utilization protein K06193 phnA; protein PhnA D AYR47_28165 hypothetical protein K21741 rclC; reactive chlorine resistance protein C C 99997 Function unknown D AYR47_02765 hypothetical protein K06867 K06867; uncharacterized protein D AYR47_28365 hypothetical protein K06867 K06867; uncharacterized protein D AYR47_14245 methanol dehydrogenase K06872 K06872; uncharacterized protein D AYR47_24810 hypothetical protein K06872 K06872; uncharacterized protein D AYR47_28400 alpha/beta hydrolase K06889 K06889; uncharacterized protein D AYR47_24510 alpha/beta hydrolase K06889 K06889; uncharacterized protein D AYR47_13370 alpha/beta hydrolase K06889 K06889; uncharacterized protein D AYR47_03580 permease K06889 K06889; uncharacterized protein D AYR47_15855 AAA family ATPase K06923 K06923; uncharacterized protein D AYR47_21255 Fe-S protein K06938 K06938; uncharacterized protein D AYR47_01010 Fe-S protein K06938 K06938; uncharacterized protein D AYR47_23905 Fe-S protein K06938 K06938; uncharacterized protein D AYR47_31215 Fe-S oxidoreductase K06938 K06938; uncharacterized protein D AYR47_05885 DNA mismatch repair protein MutT K06938 K06938; uncharacterized protein D AYR47_30150 hypothetical protein K06940 K06940; uncharacterized protein D AYR47_13995 ferredoxin K06940 K06940; uncharacterized protein D AYR47_06010 Fe-S oxidoreductase K06940 K06940; uncharacterized protein D AYR47_10995 Fe-S-oxidoreductase K06940 K06940; uncharacterized protein D AYR47_11175 hypothetical protein K06950 K06950; uncharacterized protein D AYR47_13730 DEAD/DEAH box helicase K06953 K06953; uncharacterized protein D AYR47_11015 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein D AYR47_05180 L-cystine transporter tcyP K06956 K06956; uncharacterized protein D AYR47_15695 acetyltransferase K06975 K06975; uncharacterized protein D AYR47_16675 peptidase S15 K06978 K06978; uncharacterized protein D AYR47_13765 succinylglutamate desuccinylase K06987 K06987; uncharacterized protein D AYR47_30605 peptidase M14 K06987 K06987; uncharacterized protein D AYR47_22210 succinylglutamate desuccinylase K06987 K06987; uncharacterized protein D AYR47_19930 succinylglutamate desuccinylase K06987 K06987; uncharacterized protein D AYR47_04155 glyoxalase K06991 K06991; uncharacterized protein D AYR47_20325 peptidase C39 K06992 K06992; uncharacterized protein D AYR47_22045 cupin K06995 K06995; uncharacterized protein D AYR47_20470 cupin K06995 K06995; uncharacterized protein D AYR47_01890 cupin K06995 K06995; uncharacterized protein D AYR47_26825 hypothetical protein K06995 K06995; uncharacterized protein D AYR47_06045 transcriptional regulator K06995 K06995; uncharacterized protein D AYR47_09685 esterase K07000 K07000; uncharacterized protein D AYR47_20560 RND transporter K07003 K07003; uncharacterized protein D AYR47_24065 RND transporter K07003 K07003; uncharacterized protein D AYR47_26890 pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein D AYR47_11490 alpha/beta hydrolase K07018 K07018; uncharacterized protein D AYR47_05090 alpha/beta hydrolase K07019 K07019; uncharacterized protein D AYR47_29460 alpha/beta hydrolase K07020 K07020; uncharacterized protein D AYR47_02025 hypothetical protein K07028 K07028; uncharacterized protein D AYR47_21215 hypothetical protein K07039 K07039; uncharacterized protein D AYR47_29045 hypothetical protein K07039 K07039; uncharacterized protein D AYR47_24150 metal-dependent hydrolase K07044 K07044; uncharacterized protein D AYR47_02920 metallopeptidase K07054 K07054; uncharacterized protein D AYR47_03375 hypothetical protein K07068 K07068; uncharacterized protein D AYR47_07315 DNA-binding protein K07070 K07070; uncharacterized protein D AYR47_11055 epimerase K07071 K07071; uncharacterized protein D AYR47_17670 hypothetical protein K07089 K07089; uncharacterized protein D AYR47_21235 hypothetical protein K07090 K07090; uncharacterized protein D AYR47_23415 permease K07090 K07090; uncharacterized protein D AYR47_01810 hypothetical protein K07090 K07090; uncharacterized protein D AYR47_01145 permease K07090 K07090; uncharacterized protein D AYR47_20960 hypothetical protein K07090 K07090; uncharacterized protein D AYR47_17620 hypothetical protein K07090 K07090; uncharacterized protein D AYR47_05265 hypothetical protein K07090 K07090; uncharacterized protein D AYR47_15775 hypothetical protein K07090 K07090; uncharacterized protein D AYR47_04275 transcriptional initiation protein Tat K07093 K07093; uncharacterized protein D AYR47_28075 hypothetical protein K07112 K07112; uncharacterized protein D AYR47_10650 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein D AYR47_14475 hypothetical protein K07120 K07120; uncharacterized protein D AYR47_19840 hypothetical protein K07120 K07120; uncharacterized protein D AYR47_03930 short-chain dehydrogenase K07124 K07124; uncharacterized protein D AYR47_30705 AraC family transcriptional regulator K07124 K07124; uncharacterized protein D AYR47_03095 hypothetical protein K07126 K07126; uncharacterized protein D AYR47_27830 hypothetical protein K07126 K07126; uncharacterized protein D AYR47_11375 hypothetical protein K07126 K07126; uncharacterized protein D AYR47_28685 molybdenum cofactor sulfurase K07140 K07140; MOSC domain-containing protein D AYR47_03240 ATP-dependent protease K07157 K07157; uncharacterized protein D AYR47_03180 hypothetical protein K09158 K09158; uncharacterized protein D AYR47_14870 hypothetical protein K09160 K09160; uncharacterized protein D AYR47_11010 hypothetical protein K09701 K09701; uncharacterized protein D AYR47_05755 hypothetical protein K09768 K09768; uncharacterized protein D AYR47_31245 hypothetical protein K09780 K09780; uncharacterized protein D AYR47_16180 hypothetical protein K09781 K09781; uncharacterized protein D AYR47_04095 hypothetical protein K09786 K09786; uncharacterized protein D AYR47_29050 hypothetical protein K09790 K09790; uncharacterized protein D AYR47_00760 hypothetical protein K09790 K09790; uncharacterized protein D AYR47_25370 hypothetical protein K09791 K09791; uncharacterized protein D AYR47_29550 cytochrome biogenesis protein K09792 K09792; uncharacterized protein D AYR47_24450 hypothetical protein K09794 K09794; uncharacterized protein D AYR47_08805 hypothetical protein K09798 K09798; uncharacterized protein D AYR47_02275 RnfH family protein K09801 K09801; uncharacterized protein D AYR47_29390 hypothetical protein K09803 K09803; uncharacterized protein D AYR47_18280 hypothetical protein K09803 K09803; uncharacterized protein D AYR47_29280 GntR family transcriptional regulator K00243 K00243; uncharacterized protein D AYR47_09705 hypothetical protein K09857 K09857; uncharacterized protein D AYR47_05765 hypothetical protein K09859 K09859; uncharacterized protein D AYR47_12235 hypothetical protein K09861 K09861; uncharacterized protein D AYR47_11260 DNA gyrase inhibitor K09862 K09862; uncharacterized protein D AYR47_05580 hypothetical protein K09895 K09895; uncharacterized protein D AYR47_28335 hypothetical protein K09898 K09898; uncharacterized protein D AYR47_14855 hypothetical protein K09902 K09902; uncharacterized protein D AYR47_11485 cytochrome D ubiquinol oxidase subunit III K09908 K09908; uncharacterized protein D AYR47_29200 nucleoprotein/polynucleotide-associated enzyme K09912 K09912; uncharacterized protein D AYR47_17625 hypothetical protein K09915 K09915; uncharacterized protein D AYR47_20235 hypothetical protein K09916 K09916; uncharacterized protein D AYR47_12455 hypothetical protein K09918 K09918; uncharacterized protein D AYR47_29395 acyltransferase superfamily protein K09919 K09919; uncharacterized protein D AYR47_09675 cytoplasmic protein K09920 K09920; uncharacterized protein D AYR47_05905 hypothetical protein K09921 K09921; uncharacterized protein D AYR47_29780 hypothetical protein K09923 K09923; uncharacterized protein D AYR47_28280 hypothetical protein K09924 K09924; uncharacterized protein D AYR47_29535 hypothetical protein K09926 K09926; uncharacterized protein D AYR47_15790 cytoplasmic protein K09927 K09927; uncharacterized protein D AYR47_25395 ATP-binding protein K09928 K09928; uncharacterized protein D AYR47_25865 hypothetical protein K09930 K09930; uncharacterized protein D AYR47_06675 hypothetical protein K09930 K09930; uncharacterized protein D AYR47_13945 hypothetical protein K09930 K09930; uncharacterized protein D AYR47_01650 antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein D AYR47_19280 antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein D AYR47_29175 hypothetical protein K09938 K09938; uncharacterized protein D AYR47_06110 orotate phosphoribosyltransferase K09940 K09940; uncharacterized protein D AYR47_03015 ABC transporter substrate-binding protein K09945 K09945; uncharacterized protein D AYR47_00785 hypothetical protein K09947 K09947; uncharacterized protein D AYR47_01670 cell division protein DedD K09948 K09948; uncharacterized protein D AYR47_06420 hypothetical protein K09950 K09950; uncharacterized protein D AYR47_03545 hypothetical protein K09950 K09950; uncharacterized protein D AYR47_21770 hypothetical protein K09958 K09958; uncharacterized protein D AYR47_27775 hypothetical protein K09962 K09962; uncharacterized protein D AYR47_31130 acetyltransferase K09964 K09964; uncharacterized protein D AYR47_19175 hypothetical protein K09965 K09965; uncharacterized protein D AYR47_15540 hypothetical protein K09967 K09967; uncharacterized protein D AYR47_08930 hypothetical protein K09975 K09975; uncharacterized protein D AYR47_20205 cobalt chelatase K09977 K09977; uncharacterized protein D AYR47_17630 hypothetical protein K09983 K09983; uncharacterized protein D AYR47_30270 proteophosphoglycan precursor K09986 K09986; uncharacterized protein D AYR47_14950 hypothetical protein K09989 K09989; uncharacterized protein D AYR47_00780 imelysin K07338 K07338; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 11, 2024