+D GENES KO #

  KEGG Orthology (KO) - Porphyromonas crevioricanis

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:pcre00010] D NCTC12858_01813 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D NCTC12858_01157 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NCTC12858_00903 pfkA_2; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NCTC12858_00254 pfkA_1; 6-phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D NCTC12858_01257 fbp; Fructose-1,6-bisphosphatase class 3 K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D NCTC12858_00006 fda; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NCTC12858_00316 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NCTC12858_00103 gapA; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NCTC12858_01798 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NCTC12858_00672 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D NCTC12858_01039 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NCTC12858_01469 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NCTC12858_01415 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NCTC12858_01792 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D NCTC12858_01596 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCTC12858_01353 porA_1; Pyruvate synthase subunit porA K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NCTC12858_01806 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D NCTC12858_01397 porA_2; Pyruvate synthase subunit porA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D NCTC12858_01807 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D NCTC12858_01399 porB; Pyruvate synthase subunit porB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D NCTC12858_01364 Uncharacterized conserved protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D NCTC12858_01203 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NCTC12858_00970 pckA; Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:pcre00020] D NCTC12858_01596 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCTC12858_01806 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D NCTC12858_01397 porA_2; Pyruvate synthase subunit porA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D NCTC12858_01807 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D NCTC12858_01399 porB; Pyruvate synthase subunit porB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D NCTC12858_01400 porC; Pyruvate synthase subunit porC K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D NCTC12858_01068 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NCTC12858_01069 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NCTC12858_01067 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NCTC12858_00999 fumB; Fumarate hydratase class I, anaerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D NCTC12858_01583 ttdA; L(+)-tartrate dehydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D NCTC12858_01584 fumA; Fumarate hydratase class I, aerobic K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D NCTC12858_01405 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NCTC12858_01783 Methylmalonyl-CoA carboxyltransferase 5S subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D NCTC12858_00970 pckA; Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D NCTC12858_01353 porA_1; Pyruvate synthase subunit porA K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:pcre00030] D NCTC12858_01157 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NCTC12858_00516 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NCTC12858_00731 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NCTC12858_00036 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D NCTC12858_00730 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D NCTC12858_00527 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D NCTC12858_01203 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NCTC12858_00219 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NCTC12858_00006 fda; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NCTC12858_01257 fbp; Fructose-1,6-bisphosphatase class 3 K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D NCTC12858_00903 pfkA_2; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NCTC12858_00254 pfkA_1; 6-phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:pcre00040] D NCTC12858_00215 tuaD; UDP-glucose 6-dehydrogenase tuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NCTC12858_00516 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:pcre00051] D NCTC12858_00118 yvyI; Putative mannose-6-phosphate isomerase yvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D NCTC12858_01661 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D NCTC12858_01869 rfbM; Mannose-1-phosphate guanylyltransferase rfbM K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D NCTC12858_01495 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D NCTC12858_01494 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D NCTC12858_00903 pfkA_2; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NCTC12858_00254 pfkA_1; 6-phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D NCTC12858_01257 fbp; Fructose-1,6-bisphosphatase class 3 K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D NCTC12858_00006 fda; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NCTC12858_00316 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NCTC12858_00730 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:pcre00052] D NCTC12858_00039 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NCTC12858_01203 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NCTC12858_01813 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D NCTC12858_00903 pfkA_2; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism D NCTC12858_00215 tuaD; UDP-glucose 6-dehydrogenase tuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:pcre00500] D NCTC12858_00416 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D NCTC12858_01203 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NCTC12858_01813 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D NCTC12858_01157 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pcre00520] D NCTC12858_00894 ybbD; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D NCTC12858_01267 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NCTC12858_01155 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NCTC12858_00621 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NCTC12858_00136 iolG; Inositol 2-dehydrogenase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D NCTC12858_00084 Putative acetyltransferase SA2342 K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D NCTC12858_01813 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D NCTC12858_01203 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NCTC12858_00215 tuaD; UDP-glucose 6-dehydrogenase tuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NCTC12858_00039 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NCTC12858_01157 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NCTC12858_00118 yvyI; Putative mannose-6-phosphate isomerase yvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D NCTC12858_01661 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D NCTC12858_01869 rfbM; Mannose-1-phosphate guanylyltransferase rfbM K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D NCTC12858_01495 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D NCTC12858_01494 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] C 00620 Pyruvate metabolism [PATH:pcre00620] D NCTC12858_01353 porA_1; Pyruvate synthase subunit porA K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NCTC12858_01806 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D NCTC12858_01397 porA_2; Pyruvate synthase subunit porA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D NCTC12858_01807 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D NCTC12858_01399 porB; Pyruvate synthase subunit porB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D NCTC12858_01596 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCTC12858_01238 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D NCTC12858_01237 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D NCTC12858_01415 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NCTC12858_01364 Uncharacterized conserved protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D NCTC12858_01186 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D NCTC12858_01226 gloB; Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D NCTC12858_01464 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D NCTC12858_00696 gcdB; Glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D NCTC12858_01783 Methylmalonyl-CoA carboxyltransferase 5S subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D NCTC12858_01405 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NCTC12858_00999 fumB; Fumarate hydratase class I, anaerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D NCTC12858_01583 ttdA; L(+)-tartrate dehydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D NCTC12858_01584 fumA; Fumarate hydratase class I, aerobic K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D NCTC12858_00970 pckA; Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D NCTC12858_01792 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pcre00630] D NCTC12858_01405 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NCTC12858_00691 4-hydroxyphenylpyruvate dioxygenase and related hemolysins K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D NCTC12858_01391 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NCTC12858_01392 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NCTC12858_01579 mutE; Methylaspartate mutase E chain K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1] D NCTC12858_01577 mamA; Methylaspartate mutase S chain K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1] D NCTC12858_01580 Methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2] D NCTC12858_01230 glyA; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NCTC12858_01187 gcvP; Glycine dehydrogenase [decarboxylating] K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D NCTC12858_01106 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NCTC12858_01596 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCTC12858_01852 gcvH; Octanoyl/lipoyl carrier protein K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:pcre00640] D NCTC12858_01364 Uncharacterized conserved protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D NCTC12858_01238 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D NCTC12858_01237 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D NCTC12858_01596 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCTC12858_01323 Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D NCTC12858_00691 4-hydroxyphenylpyruvate dioxygenase and related hemolysins K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D NCTC12858_01391 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NCTC12858_01392 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NCTC12858_00792 yqhD; Alcohol dehydrogenase YqhD K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] C 00650 Butanoate metabolism [PATH:pcre00650] D NCTC12858_00278 paaH; Probable 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D NCTC12858_01326 echA8; Probable enoyl-CoA hydratase echA8 K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D NCTC12858_01323 Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D NCTC12858_00671 ctfA; Butyrate--acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D NCTC12858_01322 ctfB; Butyrate--acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D NCTC12858_00696 gcdB; Glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D NCTC12858_00695 Methylmalonyl-CoA carboxyltransferase 1.3S subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D NCTC12858_01068 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NCTC12858_01069 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NCTC12858_01067 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NCTC12858_01805 sucD; Succinate-semialdehyde dehydrogenase (acetylating) K18119 sucD; succinate-semialdehyde dehydrogenase [EC:1.2.1.76] D NCTC12858_01804 adhB; Alcohol dehydrogenase 2 K18120 4hbD; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61] D NCTC12858_01803 scpC_3; Propionyl-CoA:succinate CoA transferase K18122 cat2; 4-hydroxybutyrate CoA-transferase [EC:2.8.3.-] D NCTC12858_01801 abfD; 4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D NCTC12858_01353 porA_1; Pyruvate synthase subunit porA K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NCTC12858_01806 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D NCTC12858_01397 porA_2; Pyruvate synthase subunit porA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D NCTC12858_01807 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D NCTC12858_01399 porB; Pyruvate synthase subunit porB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] C 00660 C5-Branched dibasic acid metabolism [PATH:pcre00660] D NCTC12858_01580 Methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2] D NCTC12858_01579 mutE; Methylaspartate mutase E chain K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1] D NCTC12858_01577 mamA; Methylaspartate mutase S chain K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1] C 00562 Inositol phosphate metabolism D NCTC12858_00316 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:pcre00190] D NCTC12858_01068 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NCTC12858_01069 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NCTC12858_01067 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NCTC12858_00554 cydA; Cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D NCTC12858_00553 cydB; Cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D NCTC12858_00675 ntpA; V-type sodium ATPase catalytic subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D NCTC12858_00676 ntpB; V-type sodium pump subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D NCTC12858_00677 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D NCTC12858_00673 V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D NCTC12858_00678 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D NCTC12858_00679 ntpK; Sodium ATPase proteolipid component K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:pcre00680] D NCTC12858_01230 glyA; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NCTC12858_01469 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NCTC12858_01405 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NCTC12858_00006 fda; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NCTC12858_01257 fbp; Fructose-1,6-bisphosphatase class 3 K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D NCTC12858_00903 pfkA_2; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NCTC12858_01238 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D NCTC12858_01237 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D NCTC12858_00672 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D NCTC12858_01039 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NCTC12858_01559 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NCTC12858_01560 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NCTC12858_00839 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D NCTC12858_01107 comB; Probable 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] C 00910 Nitrogen metabolism [PATH:pcre00910] D NCTC12858_01014 gdh; NAD-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D NCTC12858_01428 gltD; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] C 00920 Sulfur metabolism D NCTC12858_01659 nrnA; Bifunctional oligoribonuclease and PAP phosphatase nrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:pcre00061] D NCTC12858_00409 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein D NCTC12858_01688 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NCTC12858_00159 fabH_2; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NCTC12858_00020 fabH_1; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NCTC12858_00410 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NCTC12858_01260 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCTC12858_00467 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCTC12858_00271 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D NCTC12858_00429 Nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D NCTC12858_01517 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCTC12858_00657 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:pcre00071] D NCTC12858_01323 Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D NCTC12858_01517 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCTC12858_00657 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism D NCTC12858_00116 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:pcre00564] D NCTC12858_01158 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D NCTC12858_00116 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NCTC12858_00466 tagD; Glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] D NCTC12858_01008 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D NCTC12858_01519 CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D NCTC12858_01518 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D NCTC12858_01327 HAD hydrolase, family IB K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D NCTC12858_01073 cls; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:pcre00230] D NCTC12858_01203 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NCTC12858_00219 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NCTC12858_01547 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D NCTC12858_01200 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D NCTC12858_00408 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D NCTC12858_00310 purL_2; Phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D NCTC12858_00309 purL_1; Phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NCTC12858_00275 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D NCTC12858_01853 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D NCTC12858_01500 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D NCTC12858_00898 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D NCTC12858_00953 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NCTC12858_01593 surE; 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NCTC12858_01171 punA; Purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D NCTC12858_01671 hpt; Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D NCTC12858_01551 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D NCTC12858_01589 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D NCTC12858_01670 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NCTC12858_00255 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D NCTC12858_01189 nrdE; Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NCTC12858_01272 nrdD; Anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D NCTC12858_01074 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D NCTC12858_01131 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D NCTC12858_01309 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D NCTC12858_00771 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D NCTC12858_00135 yfkN; Trifunctional nucleotide phosphoesterase protein YfkN precursor K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D NCTC12858_01672 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:pcre00240] D NCTC12858_01550 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NCTC12858_01548 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NCTC12858_00975 pyrB; Aspartate carbamoyltransferase catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D NCTC12858_00976 pyrI; Aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D NCTC12858_01222 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D NCTC12858_01373 pyrD_2; Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D NCTC12858_01374 pyrK_1; Dihydrdoorotate oxidase B, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D NCTC12858_00853 pyrD_1; Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D NCTC12858_01056 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D NCTC12858_00273 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D NCTC12858_00535 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D NCTC12858_01760 maf; Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D NCTC12858_01545 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D NCTC12858_01771 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D NCTC12858_00986 udk_1; Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D NCTC12858_01196 udk_2; Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D NCTC12858_01593 surE; 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NCTC12858_01614 udp; Uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D NCTC12858_01037 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D NCTC12858_00135 yfkN; Trifunctional nucleotide phosphoesterase protein YfkN precursor K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D NCTC12858_00037 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D NCTC12858_01272 nrdD; Anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D NCTC12858_01189 nrdE; Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NCTC12858_00198 ribD_1; Riboflavin biosynthesis protein RibD K01493 comEB; dCMP deaminase [EC:3.5.4.12] D NCTC12858_01855 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D NCTC12858_00708 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D NCTC12858_01442 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D NCTC12858_00599 ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:pcre00250] D NCTC12858_01865 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D NCTC12858_00593 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D NCTC12858_01842 Asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NCTC12858_01055 ramA; (R)-stereoselective amidase K13566 NIT2; omega-amidase [EC:3.5.1.3] D NCTC12858_00901 aspA; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D NCTC12858_01309 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D NCTC12858_00898 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D NCTC12858_00975 pyrB; Aspartate carbamoyltransferase catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D NCTC12858_00976 pyrI; Aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D NCTC12858_01428 gltD; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D NCTC12858_01014 gdh; NAD-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D NCTC12858_01550 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NCTC12858_01548 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NCTC12858_00309 purL_1; Phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NCTC12858_01267 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NCTC12858_01547 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:pcre00260] D NCTC12858_01849 lysC; Lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D NCTC12858_00397 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NCTC12858_01230 glyA; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NCTC12858_00672 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D NCTC12858_01039 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NCTC12858_01559 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NCTC12858_01560 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NCTC12858_00839 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D NCTC12858_00599 ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D NCTC12858_00560 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D NCTC12858_01187 gcvP; Glycine dehydrogenase [decarboxylating] K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D NCTC12858_01106 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NCTC12858_01596 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCTC12858_01852 gcvH; Octanoyl/lipoyl carrier protein K02437 gcvH; glycine cleavage system H protein D NCTC12858_01519 CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D NCTC12858_00509 sdaB; L-serine dehydratase 2 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00270 Cysteine and methionine metabolism [PATH:pcre00270] D NCTC12858_00559 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D NCTC12858_01170 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D NCTC12858_01232 mdeA; Methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D NCTC12858_01849 lysC; Lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D NCTC12858_00397 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NCTC12858_01764 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NCTC12858_01405 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NCTC12858_00509 sdaB; L-serine dehydratase 2 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D NCTC12858_01559 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NCTC12858_01560 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:pcre00280] D NCTC12858_01764 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NCTC12858_01596 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCTC12858_01323 Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D NCTC12858_00691 4-hydroxyphenylpyruvate dioxygenase and related hemolysins K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D NCTC12858_01391 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NCTC12858_01392 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pcre00290] D NCTC12858_01764 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:pcre00300] D NCTC12858_01849 lysC; Lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D NCTC12858_00397 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NCTC12858_00650 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NCTC12858_00793 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D NCTC12858_00444 ddh; Meso-diaminopimelate D-dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D NCTC12858_00548 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NCTC12858_00861 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NCTC12858_00707 alr; Alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] C 00310 Lysine degradation [PATH:pcre00310] D NCTC12858_01596 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCTC12858_01516 kamA; L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D NCTC12858_01320 D-Lysine 5,6-aminomutase alpha subunit K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3] D NCTC12858_01321 methylaspartate mutase subunit S K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3] D NCTC12858_01515 S-(hydroxymethyl)mycothiol dehydrogenase K18012 kdd; L-erythro-3,5-diaminohexanoate dehydrogenase [EC:1.4.1.11] D NCTC12858_01514 Uncharacterized conserved protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247] D NCTC12858_01513 Thioesterase superfamily K18014 kal; 3-aminobutyryl-CoA ammonia-lyase [EC:4.3.1.14] D NCTC12858_00671 ctfA; Butyrate--acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D NCTC12858_01322 ctfB; Butyrate--acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] C 00220 Arginine biosynthesis [PATH:pcre00220] D NCTC12858_00309 purL_1; Phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NCTC12858_01550 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NCTC12858_01548 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NCTC12858_01014 gdh; NAD-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] C 00330 Arginine and proline metabolism [PATH:pcre00330] D NCTC12858_01011 pyruvoyl-dependent arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D NCTC12858_00260 aguA; Putative agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D NCTC12858_00259 N-carbamoyl-D-amino acid hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D NCTC12858_01601 bifunctional aspartate kinase/diaminopimelate decarboxylase protein K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] C 00340 Histidine metabolism [PATH:pcre00340] D NCTC12858_00704 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D NCTC12858_00729 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D NCTC12858_00702 hutI; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D NCTC12858_00154 Glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] C 00350 Tyrosine metabolism D NCTC12858_00848 tpl_1; Tyrosine phenol-lyase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2] C 00360 Phenylalanine metabolism D NCTC12858_00278 paaH; Probable 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] C 00380 Tryptophan metabolism [PATH:pcre00380] D NCTC12858_01596 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCTC12858_01229 tpl_2; Tyrosine phenol-lyase K01667 tnaA; tryptophanase [EC:4.1.99.1] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pcre00400] D NCTC12858_00762 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D NCTC12858_01416 yqhS; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D NCTC12858_00518 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D NCTC12858_00004 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D NCTC12858_01358 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D NCTC12858_00626 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D NCTC12858_01090 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase K04516 AROA1; chorismate mutase [EC:5.4.99.5] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:pcre00410] D NCTC12858_00379 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D NCTC12858_00096 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D NCTC12858_01323 Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] C 00430 Taurine and hypotaurine metabolism [PATH:pcre00430] D NCTC12858_01237 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D NCTC12858_01238 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:pcre00450] D NCTC12858_01232 mdeA; Methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D NCTC12858_00532 sufS; Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D NCTC12858_01809 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D NCTC12858_01600 selD; Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D NCTC12858_00138 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:pcre00460] D NCTC12858_00593 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D NCTC12858_01230 glyA; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:pcre00470] D NCTC12858_00707 alr; Alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D NCTC12858_01253 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NCTC12858_00309 purL_1; Phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NCTC12858_00981 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D NCTC12858_00546 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NCTC12858_01320 D-Lysine 5,6-aminomutase alpha subunit K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3] D NCTC12858_01321 methylaspartate mutase subunit S K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3] C 00480 Glutathione metabolism [PATH:pcre00480] D NCTC12858_01791 pepD_2; Cytosol non-specific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D NCTC12858_01687 pepD_1; Cytosol non-specific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D NCTC12858_00588 bsaA; Glutathione peroxidase homolog BsaA K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:pcre00540] D NCTC12858_00270 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D NCTC12858_00271 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D NCTC12858_00272 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D NCTC12858_00088 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D NCTC12858_01592 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D NCTC12858_01062 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D NCTC12858_01167 kdsD; Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D NCTC12858_01512 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D NCTC12858_01761 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D NCTC12858_01249 kpsU; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D NCTC12858_00081 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D NCTC12858_00306 htrB; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D NCTC12858_00946 cptA_2; Phosphoethanolamine transferase CptA K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pcre00541] D NCTC12858_00039 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NCTC12858_00215 tuaD; UDP-glucose 6-dehydrogenase tuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NCTC12858_00850 rmlA2; Glucose-1-phosphate thymidylyltransferase 2 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NCTC12858_00912 rffG; dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NCTC12858_00911 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NCTC12858_00216 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D NCTC12858_00118 yvyI; Putative mannose-6-phosphate isomerase yvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D NCTC12858_01661 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D NCTC12858_01869 rfbM; Mannose-1-phosphate guanylyltransferase rfbM K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D NCTC12858_01495 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D NCTC12858_01494 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D NCTC12858_00136 iolG; Inositol 2-dehydrogenase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D NCTC12858_00084 Putative acetyltransferase SA2342 K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] C 00550 Peptidoglycan biosynthesis [PATH:pcre00550] D NCTC12858_01155 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NCTC12858_00621 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NCTC12858_00749 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NCTC12858_00546 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NCTC12858_00548 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NCTC12858_01253 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NCTC12858_00861 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NCTC12858_00707 alr; Alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D NCTC12858_00030 uppS; Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NCTC12858_01345 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NCTC12858_01352 phosphatidylglycerophosphatase B K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D NCTC12858_00547 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NCTC12858_00544 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NCTC12858_01049 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCTC12858_01216 pbpD; Penicillin-binding protein 4 precursor K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCTC12858_00949 pbpA; Penicillin-binding protein A K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NCTC12858_00549 ftsI; Peptidoglycan synthase FtsI precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NCTC12858_01793 dacB; D-alanyl-D-alanine carboxypeptidase dacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:pcre00552] D NCTC12858_01345 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NCTC12858_01352 phosphatidylglycerophosphatase B K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:pcre00543] D NCTC12858_01018 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K19294 algI; alginate O-acetyltransferase complex protein AlgI B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:pcre00730] D NCTC12858_01439 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D NCTC12858_01063 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D NCTC12858_00537 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D NCTC12858_00100 phoB; Alkaline phosphatase 3 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NCTC12858_00058 Thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D NCTC12858_01672 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:pcre00740] D NCTC12858_01459 ribBA; Riboflavin biosynthesis protein ribBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D NCTC12858_01535 ribD_2; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D NCTC12858_01143 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D NCTC12858_01408 ribE; Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D NCTC12858_00932 ribF; Riboflavin biosynthesis protein ribF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] C 00750 Vitamin B6 metabolism [PATH:pcre00750] D NCTC12858_00289 pdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D NCTC12858_00048 pdxB; Erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D NCTC12858_01560 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NCTC12858_01833 pdxJ; Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] C 00760 Nicotinate and nicotinamide metabolism [PATH:pcre00760] D NCTC12858_01865 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D NCTC12858_01867 nadA; Quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D NCTC12858_01866 nadC; Probable nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D NCTC12858_00262 pncB2; Nicotinate phosphoribosyltransferase 2 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D NCTC12858_01171 punA; Purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D NCTC12858_01593 surE; 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NCTC12858_00261 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D NCTC12858_00969 nadE; Glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D NCTC12858_01243 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D NCTC12858_01871 cobB_2; NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D NCTC12858_01834 ppnK; Probable inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D NCTC12858_01220 pntA_1; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D NCTC12858_01221 pntA_2; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D NCTC12858_01219 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:pcre00770] D NCTC12858_01669 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D NCTC12858_00096 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D NCTC12858_01335 coaX; Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D NCTC12858_01507 coaBC; DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D NCTC12858_01112 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D NCTC12858_00562 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D NCTC12858_01786 Uncharacterised protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D NCTC12858_01764 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NCTC12858_00379 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:pcre00780] D NCTC12858_01667 bioC; Malonyl-CoA O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D NCTC12858_00410 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NCTC12858_01260 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCTC12858_00467 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCTC12858_01666 Uncharacterized protein conserved in bacteria K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D NCTC12858_01665 bioF_2; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NCTC12858_01197 bioF_1; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NCTC12858_01664 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D NCTC12858_01130 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D NCTC12858_01239 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D NCTC12858_01587 birA; Bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:pcre00785] D NCTC12858_00622 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D NCTC12858_00328 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D NCTC12858_01596 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCTC12858_01187 gcvP; Glycine dehydrogenase [decarboxylating] K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D NCTC12858_01106 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NCTC12858_01852 gcvH; Octanoyl/lipoyl carrier protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:pcre00790] D NCTC12858_00318 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D NCTC12858_00100 phoB; Alkaline phosphatase 3 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NCTC12858_01606 folB; Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D NCTC12858_01348 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D NCTC12858_01330 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D NCTC12858_01441 dfrA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D NCTC12858_01308 folC; Bifunctional protein folC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D NCTC12858_01459 ribBA; Riboflavin biosynthesis protein ribBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D NCTC12858_00625 pabB; Para-aminobenzoate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D NCTC12858_00624 Uncharacterised protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D NCTC12858_00324 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D NCTC12858_00325 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D NCTC12858_01457 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D NCTC12858_00585 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:pcre00670] D NCTC12858_01441 dfrA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D NCTC12858_01078 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D NCTC12858_01284 folD; PPDC K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D NCTC12858_00703 fchA; Methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D NCTC12858_01230 glyA; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NCTC12858_00408 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D NCTC12858_00953 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NCTC12858_00154 Glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] D NCTC12858_01136 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D NCTC12858_01106 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NCTC12858_01442 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D NCTC12858_00196 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:pcre00860] D NCTC12858_00080 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCTC12858_00574 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D NCTC12858_00578 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D NCTC12858_00577 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D NCTC12858_00575 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D NCTC12858_01360 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D NCTC12858_01468 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D NCTC12858_00576 cysG; Siroheme synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D NCTC12858_00573 cbiO; Cobalt import ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D NCTC12858_00966 cbiK; Sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D NCTC12858_01244 cobI; Precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D NCTC12858_01484 cobK; Precorrin-6A reductase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D NCTC12858_01076 cobL; Precorrin-6Y C(5,15)-methyltransferase [decarboxylating] K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D NCTC12858_00652 cobB_1; Cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D NCTC12858_01097 cobN; Aerobic cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D NCTC12858_01297 yvqK_2; Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NCTC12858_00653 yvqK_1; Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NCTC12858_00654 cobQ; Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D NCTC12858_00656 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D NCTC12858_01876 cobP; Adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D NCTC12858_01101 cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D NCTC12858_01875 cobT; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D NCTC12858_00152 alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D NCTC12858_00655 cobD; Threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pcre00130] D NCTC12858_01501 ubiE_2; Demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D NCTC12858_01269 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D NCTC12858_01138 menE_2; 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D NCTC12858_01270 menB; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D NCTC12858_01850 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:pcre00900] D NCTC12858_01439 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D NCTC12858_01153 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D NCTC12858_00984 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D NCTC12858_01651 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D NCTC12858_01575 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D NCTC12858_01854 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D NCTC12858_01770 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D NCTC12858_01126 Farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D NCTC12858_00438 ispB; Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D NCTC12858_00030 uppS; Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D NCTC12858_00731 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:pcre00523] D NCTC12858_00850 rmlA2; Glucose-1-phosphate thymidylyltransferase 2 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NCTC12858_00912 rffG; dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NCTC12858_00911 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NCTC12858_00216 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D NCTC12858_00912 rffG; dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:pcre00261] D NCTC12858_01849 lysC; Lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D NCTC12858_00397 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NCTC12858_00650 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NCTC12858_00793 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:pcre00521] D NCTC12858_01813 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D NCTC12858_01203 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NCTC12858_00850 rmlA2; Glucose-1-phosphate thymidylyltransferase 2 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NCTC12858_00912 rffG; dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NCTC12858_00911 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NCTC12858_00216 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D NCTC12858_01813 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:pcre00525] D NCTC12858_00850 rmlA2; Glucose-1-phosphate thymidylyltransferase 2 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NCTC12858_00912 rffG; dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D NCTC12858_00626 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D NCTC12858_01688 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NCTC12858_01260 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCTC12858_00467 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D NCTC12858_00409 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D NCTC12858_00559 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:pcre00362] D NCTC12858_00696 gcdB; Glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D NCTC12858_00695 Methylmalonyl-CoA carboxyltransferase 1.3S subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D NCTC12858_00278 paaH; Probable 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] C 00627 Aminobenzoate degradation D NCTC12858_00671 ctfA; Butyrate--acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D NCTC12858_01322 ctfB; Butyrate--acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:pcre03020] D NCTC12858_00234 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NCTC12858_00233 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NCTC12858_00346 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:pcre03010] D NCTC12858_00924 rpsA; 70 kDa antigen K02945 RP-S1; small subunit ribosomal protein S1 D NCTC12858_00641 rpsB; Vegetative protein 209 K02967 RP-S2; small subunit ribosomal protein S2 D NCTC12858_00367 rpsC; BS2 K02982 RP-S3; small subunit ribosomal protein S3 D NCTC12858_00347 rpsD; BS5 K02986 RP-S4; small subunit ribosomal protein S4 D NCTC12858_00356 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D NCTC12858_01481 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D NCTC12858_00376 rpsG; RRP-S7 K02992 RP-S7; small subunit ribosomal protein S7 D NCTC12858_00359 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D NCTC12858_00640 rpsI; RRP-S9 K02996 RP-S9; small subunit ribosomal protein S9 D NCTC12858_00374 rpsJ; BS13 K02946 RP-S10; small subunit ribosomal protein S10 D NCTC12858_00348 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D NCTC12858_00377 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D NCTC12858_00349 rpsM; BS14 K02952 RP-S13; small subunit ribosomal protein S13 D NCTC12858_00360 rpsN2; Alternate 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D NCTC12858_00849 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D NCTC12858_00681 rpsP; BS17 K02959 RP-S16; small subunit ribosomal protein S16 D NCTC12858_00364 rpsQ; BS16 K02961 RP-S17; small subunit ribosomal protein S17 D NCTC12858_01482 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D NCTC12858_00369 rpsS; BS17 K02965 RP-S19; small subunit ribosomal protein S19 D NCTC12858_00907 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D NCTC12858_01070 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D NCTC12858_00237 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D NCTC12858_00370 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D NCTC12858_00373 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D NCTC12858_00372 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D NCTC12858_00361 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D NCTC12858_00358 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D NCTC12858_00235 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D NCTC12858_01483 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D NCTC12858_00236 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D NCTC12858_00238 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D NCTC12858_00639 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D NCTC12858_00363 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D NCTC12858_00354 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D NCTC12858_00366 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D NCTC12858_00345 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D NCTC12858_00357 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D NCTC12858_01199 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D NCTC12858_01765 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D NCTC12858_01812 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D NCTC12858_00368 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D NCTC12858_00371 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D NCTC12858_00362 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D NCTC12858_00122 rplY; General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25 D NCTC12858_01811 rpmA; RRP-L27 K02899 RP-L27; large subunit ribosomal protein L27 D NCTC12858_01758 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D NCTC12858_00365 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D NCTC12858_00355 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D NCTC12858_01489 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D NCTC12858_00158 rpmF; BL37 K02911 RP-L32; large subunit ribosomal protein L32 D NCTC12858_01757 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33 D NCTC12858_01766 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D NCTC12858_00350 rpmJ; Ribosomal protein B K02919 RP-L36; large subunit ribosomal protein L36 D NCTC12858_00110 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NCTC12858_00299 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NCTC12858_01289 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NCTC12858_01777 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NCTC12858_00107 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NCTC12858_00296 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NCTC12858_01774 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NCTC12858_01292 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NCTC12858_00106 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NCTC12858_00295 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NCTC12858_01293 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NCTC12858_01773 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:pcre00970] D NCTC12858_00141 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCTC12858_00297 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCTC12858_01291 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCTC12858_01775 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCTC12858_00108 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCTC12858_00683 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCTC12858_01553 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCTC12858_00684 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCTC12858_01190 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCTC12858_01607 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCTC12858_00917 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NCTC12858_00918 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NCTC12858_00919 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NCTC12858_00920 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NCTC12858_00716 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D NCTC12858_01822 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D NCTC12858_00224 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NCTC12858_00632 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NCTC12858_00906 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NCTC12858_00908 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NCTC12858_01141 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NCTC12858_01139 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NCTC12858_00398 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NCTC12858_01654 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NCTC12858_01883 tRNA-His K14226 tRNA-His; tRNA His D NCTC12858_00109 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NCTC12858_01776 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NCTC12858_00298 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NCTC12858_01290 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NCTC12858_00522 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCTC12858_01652 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCTC12858_01140 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCTC12858_01461 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCTC12858_01653 tRNA-Ser K14228 tRNA-Leu; tRNA Leu D NCTC12858_01128 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NCTC12858_01534 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NCTC12858_01129 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NCTC12858_00442 tRNA-Met K14230 tRNA-Met; tRNA Met D NCTC12858_01006 tRNA-Met K14230 tRNA-Met; tRNA Met D NCTC12858_00552 tRNA-Met K14230 tRNA-Met; tRNA Met D NCTC12858_01648 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D NCTC12858_01436 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NCTC12858_01357 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NCTC12858_00728 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NCTC12858_00165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NCTC12858_00647 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NCTC12858_00790 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NCTC12858_01123 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NCTC12858_00243 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NCTC12858_01837 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NCTC12858_01447 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NCTC12858_00241 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D NCTC12858_01142 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D NCTC12858_00244 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D NCTC12858_01162 tRNA-Val K14237 tRNA-Val; tRNA Val D NCTC12858_01163 tRNA-Val K14237 tRNA-Val; tRNA Val D NCTC12858_00080 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCTC12858_00721 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D NCTC12858_00761 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NCTC12858_01423 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NCTC12858_00896 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D NCTC12858_01595 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D NCTC12858_01768 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NCTC12858_01810 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NCTC12858_00413 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NCTC12858_00138 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NCTC12858_01136 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D NCTC12858_01840 valS_2; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NCTC12858_00734 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NCTC12858_00767 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NCTC12858_01159 lysU; Lysine--tRNA ligase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NCTC12858_01529 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NCTC12858_00910 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NCTC12858_01440 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NCTC12858_00101 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NCTC12858_00120 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NCTC12858_00094 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NCTC12858_00294 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:pcre03060] D NCTC12858_00353 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NCTC12858_00240 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NCTC12858_01443 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NCTC12858_00565 secDF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D NCTC12858_00564 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NCTC12858_01546 yidC; Oxa1Ec K03217 yidC; YidC/Oxa1 family membrane protein insertase D NCTC12858_01277 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NCTC12858_00378 ffh; Fifty-four homolog K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NCTC12858_00344 ftsY; Cell division protein FtsY homolog K03110 ftsY; fused signal recognition particle receptor D NCTC12858_00794 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NCTC12858_00795 spsB; Signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89] D NCTC12858_00765 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system C 03050 Proteasome C 03018 RNA degradation [PATH:pcre03018] D NCTC12858_01469 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NCTC12858_00387 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NCTC12858_01300 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NCTC12858_01165 cshA_2; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NCTC12858_00889 recQ_1; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NCTC12858_01466 recQ_2; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NCTC12858_00400 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho D NCTC12858_00528 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D NCTC12858_00903 pfkA_2; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NCTC12858_00798 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D NCTC12858_00557 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NCTC12858_00003 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:pcre03030] D NCTC12858_00134 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCTC12858_01506 dinG; Probable ATP-dependent helicase dinG homolog K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCTC12858_01486 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NCTC12858_01087 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NCTC12858_00780 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NCTC12858_00772 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NCTC12858_01505 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NCTC12858_00222 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D NCTC12858_01248 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D NCTC12858_01788 ssb; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein D NCTC12858_00055 rnhA; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NCTC12858_00531 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D NCTC12858_00439 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NCTC12858_01873 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:pcre03410] D NCTC12858_00102 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NCTC12858_00473 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D NCTC12858_00904 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D NCTC12858_00073 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NCTC12858_00439 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NCTC12858_01465 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NCTC12858_01873 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:pcre03420] D NCTC12858_01038 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D NCTC12858_00049 uvrA_1; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D NCTC12858_00392 uvrA_2; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D NCTC12858_01246 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D NCTC12858_00437 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D NCTC12858_00390 pcrA; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NCTC12858_00439 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NCTC12858_01873 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:pcre03430] D NCTC12858_01280 mutS_1; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS D NCTC12858_01319 mutS_2; DNA mismatch repair protein mutS K07456 mutS2; DNA mismatch repair protein MutS2 D NCTC12858_00402 mutS2; MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2 D NCTC12858_00893 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D NCTC12858_00390 pcrA; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NCTC12858_00598 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D NCTC12858_00983 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D NCTC12858_01465 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NCTC12858_01788 ssb; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein D NCTC12858_01486 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NCTC12858_01505 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NCTC12858_01087 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NCTC12858_00772 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NCTC12858_00780 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NCTC12858_00134 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCTC12858_01506 dinG; Probable ATP-dependent helicase dinG homolog K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCTC12858_01873 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NCTC12858_00875 dpnM; Modification methylase DpnIIA K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:pcre03440] D NCTC12858_01465 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NCTC12858_01788 ssb; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein D NCTC12858_00507 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF D NCTC12858_01477 recR; Recombination protein RecR K06187 recR; recombination protein RecR D NCTC12858_00257 recA; Recombinase A K03553 recA; recombination protein RecA D NCTC12858_00439 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NCTC12858_01052 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D NCTC12858_00009 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D NCTC12858_00143 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D NCTC12858_00229 recG; ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NCTC12858_00814 Uncharacterized protein conserved in archaea K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NCTC12858_01486 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NCTC12858_01505 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NCTC12858_01087 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NCTC12858_00772 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NCTC12858_00780 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NCTC12858_00134 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCTC12858_01506 dinG; Probable ATP-dependent helicase dinG homolog K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCTC12858_01247 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:pcre02010] D NCTC12858_01017 virulence factor Mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NCTC12858_01341 mlaE; Probable phospholipid ABC transporter permease protein mlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D NCTC12858_01342 metN; Methionine import ATP-binding protein MetN K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D NCTC12858_00572 cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein D NCTC12858_00571 cbiM; Energy-coupling factor transporter probable substrate-capture protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D NCTC12858_00573 cbiO; Cobalt import ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D NCTC12858_00105 lolE_1; Lipoprotein-releasing system transmembrane protein lolE K09808 lolC_E; lipoprotein-releasing system permease protein D NCTC12858_00773 lolE_2; Lipoprotein-releasing system transmembrane protein lolE K09808 lolC_E; lipoprotein-releasing system permease protein D NCTC12858_00777 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D NCTC12858_01458 Predicted permeases K07091 lptF; lipopolysaccharide export system permease protein D NCTC12858_01473 lipopolysaccharide ABC transporter permease K11720 lptG; lipopolysaccharide export system permease protein D NCTC12858_00115 lptB_1; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D NCTC12858_01343 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D NCTC12858_01848 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NCTC12858_00495 Putative multidrug export ATP-binding/permease protein SAV1866 K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D NCTC12858_00859 irtA_1; Iron import ATP-binding/permease protein IrtA K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D NCTC12858_01731 irtA_2; Iron import ATP-binding/permease protein IrtA K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D NCTC12858_00494 Putative multidrug export ATP-binding/permease protein SAV1866 K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D NCTC12858_00860 msbA_1; Lipid A export ATP-binding/permease protein MsbA K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D NCTC12858_01732 Putative multidrug export ATP-binding/permease protein SAV1866 K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D NCTC12858_01815 msbA_2; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:pcre03070] D NCTC12858_00565 secDF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D NCTC12858_00240 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NCTC12858_01443 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NCTC12858_00353 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NCTC12858_00564 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NCTC12858_01546 yidC; Oxa1Ec K03217 yidC; YidC/Oxa1 family membrane protein insertase D NCTC12858_01277 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NCTC12858_00344 ftsY; Cell division protein FtsY homolog K03110 ftsY; fused signal recognition particle receptor D NCTC12858_00378 ffh; Fifty-four homolog K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NCTC12858_00782 Uncharacterized protein conserved in bacteria K11904 vgrG; type VI secretion system secreted protein VgrG D NCTC12858_01620 Uncharacterized protein conserved in bacteria K11904 vgrG; type VI secretion system secreted protein VgrG D NCTC12858_00936 Uncharacterized protein conserved in bacteria K11904 vgrG; type VI secretion system secreted protein VgrG B B 09132 Signal transduction C 02020 Two-component system [PATH:pcre02020] D NCTC12858_01302 senX3; Signal-transduction histidine kinase senX3 K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NCTC12858_00100 phoB; Alkaline phosphatase 3 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NCTC12858_00043 mucD; Probable periplasmic serine endoprotease DegP-like precursor K04771 degP; serine protease Do [EC:3.4.21.107] D NCTC12858_00001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NCTC12858_01521 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D NCTC12858_00965 kinE; Sporulation kinase E K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D NCTC12858_00671 ctfA; Butyrate--acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D NCTC12858_01322 ctfB; Butyrate--acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D NCTC12858_00862 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D NCTC12858_00554 cydA; Cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D NCTC12858_00553 cydB; Cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:pcre02024] D NCTC12858_00626 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D NCTC12858_01517 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCTC12858_00657 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCTC12858_01535 ribD_2; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D NCTC12858_01546 yidC; Oxa1Ec K03217 yidC; YidC/Oxa1 family membrane protein insertase D NCTC12858_00565 secDF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D NCTC12858_00240 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NCTC12858_01443 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NCTC12858_00353 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NCTC12858_00564 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NCTC12858_01277 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NCTC12858_00344 ftsY; Cell division protein FtsY homolog K03110 ftsY; fused signal recognition particle receptor D NCTC12858_00378 ffh; Fifty-four homolog K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly [PATH:pcre02040] D NCTC12858_00042 rpoD; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor D NCTC12858_00862 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D NCTC12858_01469 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:pcre04980] D NCTC12858_01297 yvqK_2; Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NCTC12858_00653 yvqK_1; Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NCTC12858_01105 Probable GTPase Rv1496/MT1543 K07588 MMAA; GTPase [EC:3.6.5.-] D NCTC12858_01391 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NCTC12858_01392 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:pcre01501] D NCTC12858_00894 ybbD; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D NCTC12858_00827 transport protein TonB K02172 blaR1; bla regulator protein blaR1 D NCTC12858_00828 blaI; Regulatory protein BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D NCTC12858_00452 czcB; Cation efflux system protein CzcB K03585 acrA; membrane fusion protein, multidrug efflux system D NCTC12858_01049 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCTC12858_01216 pbpD; Penicillin-binding protein 4 precursor K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCTC12858_00949 pbpA; Penicillin-binding protein A K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NCTC12858_00549 ftsI; Peptidoglycan synthase FtsI precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:pcre01502] D NCTC12858_01521 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D NCTC12858_01253 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NCTC12858_00707 alr; Alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D NCTC12858_00861 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NCTC12858_00547 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NCTC12858_00544 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pcre01503] D NCTC12858_01016 amiB; N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NCTC12858_00043 mucD; Probable periplasmic serine endoprotease DegP-like precursor K04771 degP; serine protease Do [EC:3.4.21.107] D NCTC12858_00452 czcB; Cation efflux system protein CzcB K03585 acrA; membrane fusion protein, multidrug efflux system D NCTC12858_00270 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:pcre01000] C 01001 Protein kinases [BR:pcre01001] D NCTC12858_01251 PASTA domain K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D NCTC12858_00882 hipA_1; Serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NCTC12858_00883 hipA_2; Serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NCTC12858_01302 senX3; Signal-transduction histidine kinase senX3 K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NCTC12858_00965 kinE; Sporulation kinase E K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:pcre01009] D NCTC12858_00903 pfkA_2; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NCTC12858_00076 htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG D NCTC12858_00839 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:pcre01002] D NCTC12858_00765 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D NCTC12858_01591 pepC; Aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D NCTC12858_01670 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NCTC12858_00954 pgdS; Gamma-DL-glutamyl hydrolase precursor K13695 nlpC; probable lipoprotein NlpC D NCTC12858_01547 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D NCTC12858_01267 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NCTC12858_01842 Asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NCTC12858_01829 yajL; Chaperone protein YajL K03152 thiJ; protein deglycase [EC:3.5.1.124] D NCTC12858_01233 dcp_1; Peptidyl-dipeptidase dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D NCTC12858_01797 dcp_2; Peptidyl-dipeptidase dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D NCTC12858_01305 pepO; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D NCTC12858_01521 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D NCTC12858_00718 protease3 K07263 pqqL; zinc protease [EC:3.4.24.-] D NCTC12858_00472 pepT; Peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D NCTC12858_01791 pepD_2; Cytosol non-specific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D NCTC12858_01687 pepD_1; Cytosol non-specific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D NCTC12858_00352 map; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D NCTC12858_01368 Uncharacterized peptidase SA1530 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D NCTC12858_00282 ywaD; Arginyl aminopeptidase K00683 QPCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D NCTC12858_01007 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NCTC12858_01148 Peptidase family M49 K01277 DPP3; dipeptidyl-peptidase III [EC:3.4.14.4] D NCTC12858_00403 rseP; Regulator of sigma E protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D NCTC12858_00827 transport protein TonB K02172 blaR1; bla regulator protein blaR1 D NCTC12858_00043 mucD; Probable periplasmic serine endoprotease DegP-like precursor K04771 degP; serine protease Do [EC:3.4.21.107] D NCTC12858_01785 Protease 1 precursor K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50] D NCTC12858_00690 Protease 1 precursor K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50] D NCTC12858_01492 Protease 1 precursor K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50] D NCTC12858_01799 Protease 1 precursor K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50] D NCTC12858_01820 Protease 1 precursor K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50] D NCTC12858_00388 Subtilisin BL K01342 aprE; subtilisin [EC:3.4.21.62] D NCTC12858_00327 ptpA_1; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D NCTC12858_01201 ptpA_2; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D NCTC12858_01793 dacB; D-alanyl-D-alanine carboxypeptidase dacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D NCTC12858_00887 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D NCTC12858_00313 lon2; Lon protease 2 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D NCTC12858_00794 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NCTC12858_00795 spsB; Signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89] D NCTC12858_00197 Probable CtpA-like serine protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D NCTC12858_01497 Probable CtpA-like serine protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D NCTC12858_01111 ctpB; Carboxy-terminal processing protease CtpB precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D NCTC12858_01061 sppA; Protease 4 K04773 sppA; protease IV [EC:3.4.21.-] D NCTC12858_01311 pepE; Peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21] D NCTC12858_01118 Rhomboid family K07059 K07059; rhomboid family protein D NCTC12858_00417 yhbU_1; Uncharacterized protease yhbU precursor K08303 prtC; U32 family peptidase [EC:3.4.-.-] D NCTC12858_01036 yhbU_2; Uncharacterized protease yhbU precursor K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase C 01003 Glycosyltransferases [BR:pcre01003] D NCTC12858_01223 arnC_2; Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D NCTC12858_00416 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D NCTC12858_01049 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCTC12858_01216 pbpD; Penicillin-binding protein 4 precursor K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:pcre01005] D NCTC12858_00270 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D NCTC12858_01592 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D NCTC12858_00271 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D NCTC12858_00272 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D NCTC12858_00088 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D NCTC12858_01062 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D NCTC12858_00306 htrB; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D NCTC12858_00081 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D NCTC12858_01512 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D NCTC12858_01249 kpsU; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D NCTC12858_01761 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D NCTC12858_01167 kdsD; Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D NCTC12858_00946 cptA_2; Phosphoethanolamine transferase CptA K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D NCTC12858_00052 yfdH; Bactoprenol glucosyl transferase homolog from prophage CPS-53 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pcre01011] D NCTC12858_01155 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NCTC12858_00621 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NCTC12858_00749 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NCTC12858_00546 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NCTC12858_00548 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NCTC12858_00707 alr; Alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D NCTC12858_01253 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NCTC12858_00981 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D NCTC12858_00547 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NCTC12858_00544 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NCTC12858_01345 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NCTC12858_01352 phosphatidylglycerophosphatase B K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D NCTC12858_01049 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCTC12858_01216 pbpD; Penicillin-binding protein 4 precursor K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCTC12858_00949 pbpA; Penicillin-binding protein A K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NCTC12858_00549 ftsI; Peptidoglycan synthase FtsI precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NCTC12858_01793 dacB; D-alanyl-D-alanine carboxypeptidase dacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D NCTC12858_01521 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D NCTC12858_01554 mltD_2; Membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D NCTC12858_01663 mltF; Membrane-bound lytic murein transglycosylase F precursor K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D NCTC12858_01060 membrane-bound lytic transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D NCTC12858_00775 yceG; putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D NCTC12858_01016 amiB; N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:pcre01004] D NCTC12858_01688 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NCTC12858_00159 fabH_2; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NCTC12858_00020 fabH_1; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NCTC12858_00410 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NCTC12858_01260 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCTC12858_00467 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCTC12858_00271 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D NCTC12858_00429 Nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D NCTC12858_01364 Uncharacterized conserved protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D NCTC12858_01517 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCTC12858_00657 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCTC12858_00116 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:pcre01006] D NCTC12858_01126 Farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D NCTC12858_00438 ispB; Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D NCTC12858_00030 uppS; Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NCTC12858_01552 miaA_1; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NCTC12858_01676 miaA_2; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NCTC12858_01850 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D NCTC12858_01328 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45] C 01007 Amino acid related enzymes [BR:pcre01007] D NCTC12858_00080 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCTC12858_00721 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D NCTC12858_00094 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NCTC12858_00294 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D NCTC12858_00413 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NCTC12858_01529 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NCTC12858_00138 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NCTC12858_00767 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NCTC12858_01840 valS_2; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NCTC12858_00734 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NCTC12858_01159 lysU; Lysine--tRNA ligase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NCTC12858_01423 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NCTC12858_00896 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D NCTC12858_01440 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NCTC12858_01595 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D NCTC12858_01810 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NCTC12858_00910 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NCTC12858_01768 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NCTC12858_00761 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NCTC12858_00101 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NCTC12858_00120 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NCTC12858_00560 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D NCTC12858_01665 bioF_2; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NCTC12858_01197 bioF_1; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NCTC12858_01664 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D NCTC12858_00578 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D NCTC12858_01764 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NCTC12858_01560 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:pcre03000] D NCTC12858_00287 ada; Regulatory protein of adaptative response K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D NCTC12858_00433 oxyR; Morphology and auto-aggregation control protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D NCTC12858_00597 asnC; Regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D NCTC12858_01310 ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NCTC12858_01224 vfr; Cyclic AMP receptor-like protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D NCTC12858_01431 ideR; Iron-dependent repressor IdeR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D NCTC12858_00828 blaI; Regulatory protein BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D NCTC12858_01587 birA; Bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D NCTC12858_00808 Helix-turn-helix K07729 K07729; putative transcriptional regulator D NCTC12858_01556 parB; Probable chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCTC12858_01467 argR; Arginine hydroxamate resistance protein K03402 argR; transcriptional regulator of arginine metabolism D NCTC12858_00766 yocK; General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor C 03021 Transcription machinery [BR:pcre03021] D NCTC12858_00346 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NCTC12858_00234 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NCTC12858_00233 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NCTC12858_00042 rpoD; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor D NCTC12858_00862 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D NCTC12858_01454 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA D NCTC12858_00281 nusB; N utilization substance protein B homolog K03625 nusB; transcription antitermination protein NusB D NCTC12858_00239 nusG; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D NCTC12858_00766 yocK; General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor D NCTC12858_00213 greA; Transcript cleavage factor greA K03624 greA; transcription elongation factor GreA D NCTC12858_00400 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:pcre03019] D NCTC12858_01478 rng; Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D NCTC12858_00411 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D NCTC12858_00528 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D NCTC12858_01300 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NCTC12858_01165 cshA_2; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NCTC12858_00889 recQ_1; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NCTC12858_01466 recQ_2; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NCTC12858_01469 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NCTC12858_00387 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NCTC12858_00400 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho D NCTC12858_00903 pfkA_2; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NCTC12858_00798 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D NCTC12858_00557 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NCTC12858_00003 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:pcre03011] D NCTC12858_00924 rpsA; 70 kDa antigen K02945 RP-S1; small subunit ribosomal protein S1 D NCTC12858_00641 rpsB; Vegetative protein 209 K02967 RP-S2; small subunit ribosomal protein S2 D NCTC12858_00367 rpsC; BS2 K02982 RP-S3; small subunit ribosomal protein S3 D NCTC12858_00347 rpsD; BS5 K02986 RP-S4; small subunit ribosomal protein S4 D NCTC12858_00356 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D NCTC12858_01481 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D NCTC12858_00376 rpsG; RRP-S7 K02992 RP-S7; small subunit ribosomal protein S7 D NCTC12858_00359 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D NCTC12858_00640 rpsI; RRP-S9 K02996 RP-S9; small subunit ribosomal protein S9 D NCTC12858_00374 rpsJ; BS13 K02946 RP-S10; small subunit ribosomal protein S10 D NCTC12858_00348 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D NCTC12858_00377 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D NCTC12858_00349 rpsM; BS14 K02952 RP-S13; small subunit ribosomal protein S13 D NCTC12858_00360 rpsN2; Alternate 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D NCTC12858_00849 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D NCTC12858_00681 rpsP; BS17 K02959 RP-S16; small subunit ribosomal protein S16 D NCTC12858_00364 rpsQ; BS16 K02961 RP-S17; small subunit ribosomal protein S17 D NCTC12858_01482 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D NCTC12858_00369 rpsS; BS17 K02965 RP-S19; small subunit ribosomal protein S19 D NCTC12858_00907 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D NCTC12858_01070 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D NCTC12858_00237 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D NCTC12858_00370 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D NCTC12858_00373 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D NCTC12858_00372 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D NCTC12858_00361 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D NCTC12858_00358 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D NCTC12858_01483 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D NCTC12858_00236 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D NCTC12858_00238 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D NCTC12858_00235 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D NCTC12858_00639 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D NCTC12858_00363 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D NCTC12858_00354 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D NCTC12858_00366 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D NCTC12858_00345 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D NCTC12858_00357 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D NCTC12858_01199 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D NCTC12858_01765 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D NCTC12858_01812 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D NCTC12858_00368 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D NCTC12858_00371 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D NCTC12858_00362 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D NCTC12858_01811 rpmA; RRP-L27 K02899 RP-L27; large subunit ribosomal protein L27 D NCTC12858_01758 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D NCTC12858_00365 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D NCTC12858_00355 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D NCTC12858_01489 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D NCTC12858_00158 rpmF; BL37 K02911 RP-L32; large subunit ribosomal protein L32 D NCTC12858_01757 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33 D NCTC12858_01766 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D NCTC12858_00350 rpmJ; Ribosomal protein B K02919 RP-L36; large subunit ribosomal protein L36 D NCTC12858_00122 rplY; General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25 D NCTC12858_00106 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NCTC12858_00295 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NCTC12858_01293 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NCTC12858_01773 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NCTC12858_00110 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NCTC12858_00299 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NCTC12858_01289 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NCTC12858_01777 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NCTC12858_00107 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NCTC12858_00296 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NCTC12858_01774 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NCTC12858_01292 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:pcre03009] D NCTC12858_00411 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D NCTC12858_00160 era; Bex protein K03595 era; GTPase D NCTC12858_01673 obg; GTP-binding protein obg K03979 obgE; GTPase [EC:3.6.5.-] D NCTC12858_00766 yocK; General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor D NCTC12858_01454 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA D NCTC12858_00281 nusB; N utilization substance protein B homolog K03625 nusB; transcription antitermination protein NusB D NCTC12858_00239 nusG; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D NCTC12858_01685 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D NCTC12858_01530 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D NCTC12858_01782 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D NCTC12858_01185 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D NCTC12858_00551 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D NCTC12858_00226 rsmI_1; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D NCTC12858_01419 rsmI_2; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D NCTC12858_01510 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D NCTC12858_00292 rlmH; Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D NCTC12858_00754 rlmI; Ribosomal RNA large subunit methyltransferase I K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D NCTC12858_01202 rlmL; Ribosomal RNA large subunit methyltransferase L K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D NCTC12858_01245 rlmN; Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D NCTC12858_01662 rlmCD; 23S rRNA (uracil-C(5))-methyltransferase RlmCD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D NCTC12858_00897 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D NCTC12858_00960 truC; tRNA pseudouridine synthase C K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D NCTC12858_01252 rluD_1; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D NCTC12858_01261 rluD_2; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D NCTC12858_01154 rimM; Ribosome maturation factor rimM K02860 rimM; 16S rRNA processing protein RimM D NCTC12858_00343 rimO; Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D NCTC12858_00947 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D NCTC12858_01478 rng; Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D NCTC12858_01152 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D NCTC12858_01165 cshA_2; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NCTC12858_00537 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D NCTC12858_00161 der; GTP-binding protein EngA K03977 engA; GTPase D NCTC12858_01878 hflX; GTP-binding protein HflX K03665 hflX; GTPase D NCTC12858_00846 rimN; t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D NCTC12858_01131 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D NCTC12858_00104 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D NCTC12858_01455 Uncharacterised BCR, YhbC family COG0779 K09748 rimP; ribosome maturation factor RimP D NCTC12858_00266 Probable rRNA maturation factor K07042 ybeY; probable rRNA maturation factor D NCTC12858_01429 engD; GTP-dependent nucleic acid-binding protein engD K06942 ychF; ribosome-binding ATPase D NCTC12858_00157 Uncharacterized ACR, COG1399 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:pcre03016] D NCTC12858_00719 rnz; Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D NCTC12858_00080 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCTC12858_00910 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NCTC12858_00767 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NCTC12858_00734 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NCTC12858_00138 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NCTC12858_00721 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D NCTC12858_01529 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NCTC12858_01159 lysU; Lysine--tRNA ligase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NCTC12858_01423 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NCTC12858_00761 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NCTC12858_00896 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D NCTC12858_01595 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D NCTC12858_01768 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NCTC12858_01810 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NCTC12858_00413 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NCTC12858_01840 valS_2; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NCTC12858_01440 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NCTC12858_00101 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NCTC12858_00120 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NCTC12858_00094 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NCTC12858_00294 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D NCTC12858_00525 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D NCTC12858_00212 hit; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D NCTC12858_01313 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D NCTC12858_01487 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D NCTC12858_01346 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D NCTC12858_01528 mnmA; tRNA-specific 2-thiouridylase mnmA K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14] D NCTC12858_00846 rimN; t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D NCTC12858_01552 miaA_1; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NCTC12858_01676 miaA_2; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NCTC12858_00864 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D NCTC12858_00436 mnmG; Glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D NCTC12858_01600 selD; Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D NCTC12858_01361 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D NCTC12858_01198 yjjK_1; Uncharacterized ABC transporter ATP-binding protein YjjK K06020 ettA; energy-dependent translational throttle protein EttA D NCTC12858_01816 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D NCTC12858_01825 dus; Probable tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D NCTC12858_00203 miaB_1; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D NCTC12858_00305 miaB_2; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D NCTC12858_00164 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D NCTC12858_00045 yfiC; tRNA1(Val) (adenine(37)-N6)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D NCTC12858_00002 Putative TrmH family tRNA/rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D NCTC12858_01022 queA_1; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D NCTC12858_01347 queA_2; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D NCTC12858_01457 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D NCTC12858_00324 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D NCTC12858_00325 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D NCTC12858_00585 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D NCTC12858_00623 queG; Epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D NCTC12858_01137 selU; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D NCTC12858_01474 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D NCTC12858_01426 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D NCTC12858_00023 yeaZ; UGMP family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D NCTC12858_01262 gcp; t(6)A37 threonylcarbamoyladenosine biosynthesis protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D NCTC12858_00534 ydiB; ADP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D NCTC12858_00776 thiF; Sulfur carrier protein ThiS adenylyltransferase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D NCTC12858_01300 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NCTC12858_00387 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:pcre03012] D NCTC12858_00987 yciH; translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D NCTC12858_01453 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D NCTC12858_01767 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D NCTC12858_01149 yheS_2; Uncharacterized ABC transporter ATP-binding protein YheS K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D NCTC12858_00642 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D NCTC12858_00242 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu D NCTC12858_00619 fusA_2; Elongation factor G K02355 fusA; elongation factor G D NCTC12858_00375 fusA_1; Elongation factor G K02355 fusA; elongation factor G D NCTC12858_00274 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D NCTC12858_00536 frr; Vegetative protein 12B K02838 frr; ribosome recycling factor D NCTC12858_01536 prmC; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D NCTC12858_00121 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D NCTC12858_00351 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D NCTC12858_00075 efp; Elongation factor P K02356 efp; elongation factor P D NCTC12858_00506 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D NCTC12858_00992 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:pcre03110] D NCTC12858_00608 clpB_1; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D NCTC12858_01634 clpB_2; Heat shock protein F84.1 K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D NCTC12858_01102 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D NCTC12858_00888 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D NCTC12858_00076 htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG D NCTC12858_00798 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D NCTC12858_00557 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NCTC12858_01173 dnaJ; Heat shock protein J K03686 dnaJ; molecular chaperone DnaJ D NCTC12858_01172 grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE D NCTC12858_00047 hslR; Heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D NCTC12858_00556 groS; co-chaperonin GroES K04078 groES; chaperonin GroES D NCTC12858_00043 mucD; Probable periplasmic serine endoprotease DegP-like precursor K04771 degP; serine protease Do [EC:3.4.21.107] D NCTC12858_01007 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NCTC12858_00388 Subtilisin BL K01342 aprE; subtilisin [EC:3.4.21.62] D NCTC12858_01862 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D NCTC12858_00381 mip; Outer membrane protein MIP precursor K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D NCTC12858_01594 peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D NCTC12858_00382 fklB; FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D NCTC12858_00124 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase slyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D NCTC12858_00890 surA; Peptidyl-prolyl cis-trans isomerase surA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D NCTC12858_01485 trxA_2; Thioredoxin K03671 TXN; thioredoxin D NCTC12858_00909 trxA_1; Thioredoxin K03671 TXN; thioredoxin D NCTC12858_01086 Thioredoxin C-1 K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:pcre04131] D NCTC12858_00103 gapA; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NCTC12858_00672 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D NCTC12858_01415 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NCTC12858_00076 htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:pcre03051] D NCTC12858_00076 htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:pcre03032] D NCTC12858_00055 rnhA; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NCTC12858_01340 hup; HB K03530 hupB; DNA-binding protein HU-beta D NCTC12858_01479 TL29 K03530 hupB; DNA-binding protein HU-beta D NCTC12858_00001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NCTC12858_00222 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D NCTC12858_01248 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D NCTC12858_01788 ssb; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein D NCTC12858_01486 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NCTC12858_01505 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NCTC12858_00772 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NCTC12858_00780 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NCTC12858_00134 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCTC12858_01506 dinG; Probable ATP-dependent helicase dinG homolog K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCTC12858_01087 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NCTC12858_00531 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D NCTC12858_00439 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NCTC12858_01873 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NCTC12858_00875 dpnM; Modification methylase DpnIIA K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NCTC12858_00008 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NCTC12858_01394 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D NCTC12858_00247 gyrA_2; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NCTC12858_01113 gyrB_1; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NCTC12858_01488 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D NCTC12858_01742 topB_4; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D NCTC12858_00842 topB_1; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:pcre03036] D NCTC12858_00411 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D NCTC12858_01340 hup; HB K03530 hupB; DNA-binding protein HU-beta D NCTC12858_01479 TL29 K03530 hupB; DNA-binding protein HU-beta D NCTC12858_00001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NCTC12858_00886 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein D NCTC12858_00751 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA D NCTC12858_01848 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NCTC12858_00549 ftsI; Peptidoglycan synthase FtsI precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NCTC12858_01402 spoIIIE; Stage III sporulation protein E K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D NCTC12858_00750 Uncharacterised protein K03589 ftsQ; cell division protein FtsQ D NCTC12858_00545 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW D NCTC12858_01343 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D NCTC12858_00752 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NCTC12858_01016 amiB; N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NCTC12858_00452 czcB; Cation efflux system protein CzcB K03585 acrA; membrane fusion protein, multidrug efflux system D NCTC12858_00952 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D NCTC12858_00951 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D NCTC12858_00948 mrdB; Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D NCTC12858_01557 soj; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein D NCTC12858_01723 CO dehydrogenase maturation factor K03496 parA; chromosome partitioning protein D NCTC12858_01556 parB; Probable chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCTC12858_00247 gyrA_2; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NCTC12858_01113 gyrB_1; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NCTC12858_00436 mnmG; Glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D NCTC12858_01185 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D NCTC12858_00245 xerC_2; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D NCTC12858_00021 xerC_1; Tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD D NCTC12858_00087 xerD_2; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D NCTC12858_00485 xerD_3; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D NCTC12858_00490 xerD_4; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D NCTC12858_01314 minD; Cell division inhibitor MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D NCTC12858_00040 engB; Probable GTP-binding protein EngB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:pcre03400] D NCTC12858_00473 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D NCTC12858_00904 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D NCTC12858_00102 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NCTC12858_01855 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D NCTC12858_00287 ada; Regulatory protein of adaptative response K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D NCTC12858_00073 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NCTC12858_01465 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NCTC12858_01873 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NCTC12858_00439 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NCTC12858_00049 uvrA_1; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D NCTC12858_00392 uvrA_2; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D NCTC12858_01246 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D NCTC12858_00437 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D NCTC12858_00390 pcrA; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NCTC12858_00234 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NCTC12858_00233 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NCTC12858_00346 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NCTC12858_01038 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D NCTC12858_01280 mutS_1; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS D NCTC12858_01319 mutS_2; DNA mismatch repair protein mutS K07456 mutS2; DNA mismatch repair protein MutS2 D NCTC12858_00402 mutS2; MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2 D NCTC12858_00893 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D NCTC12858_00598 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D NCTC12858_00983 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D NCTC12858_01486 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NCTC12858_01505 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NCTC12858_00772 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NCTC12858_00780 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NCTC12858_00134 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCTC12858_01506 dinG; Probable ATP-dependent helicase dinG homolog K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCTC12858_01087 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NCTC12858_01788 ssb; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein D NCTC12858_00875 dpnM; Modification methylase DpnIIA K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NCTC12858_00257 recA; Recombinase A K03553 recA; recombination protein RecA D NCTC12858_01052 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D NCTC12858_00009 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D NCTC12858_00143 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D NCTC12858_01247 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D NCTC12858_00879 ATPase involved in DNA repair K03546 sbcC; DNA repair protein SbcC/Rad50 D NCTC12858_01274 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D NCTC12858_00507 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF D NCTC12858_00229 recG; ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NCTC12858_00814 Uncharacterized protein conserved in archaea K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NCTC12858_01477 recR; Recombination protein RecR K06187 recR; recombination protein RecR D NCTC12858_01509 recN; Recombination protein N K03631 recN; DNA repair protein RecN (Recombination protein N) D NCTC12858_01562 CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP K15342 cas1; CRISP-associated protein Cas1 D NCTC12858_00008 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NCTC12858_01394 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D NCTC12858_01488 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D NCTC12858_01340 hup; HB K03530 hupB; DNA-binding protein HU-beta D NCTC12858_01479 TL29 K03530 hupB; DNA-binding protein HU-beta D NCTC12858_00889 recQ_1; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NCTC12858_01466 recQ_2; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NCTC12858_01537 recombination regulator RecX K03565 recX; regulatory protein D NCTC12858_01189 nrdE; Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NCTC12858_01659 nrnA; Bifunctional oligoribonuclease and PAP phosphatase nrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:pcre03029] D NCTC12858_01453 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D NCTC12858_01767 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D NCTC12858_00642 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D NCTC12858_00242 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu D NCTC12858_00619 fusA_2; Elongation factor G K02355 fusA; elongation factor G D NCTC12858_00375 fusA_1; Elongation factor G K02355 fusA; elongation factor G D NCTC12858_00160 era; Bex protein K03595 era; GTPase D NCTC12858_00094 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NCTC12858_00734 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NCTC12858_01423 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NCTC12858_01595 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D NCTC12858_01529 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NCTC12858_01183 nucA; Nuclease precursor K01173 ENDOG; endonuclease G, mitochondrial D NCTC12858_01788 ssb; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein D NCTC12858_00029 Outer membrane protein omp85 precursor K07277 SAM50; outer membrane protein insertion porin family D NCTC12858_00798 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D NCTC12858_01172 grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE D NCTC12858_00557 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NCTC12858_00556 groS; co-chaperonin GroES K04078 groES; chaperonin GroES D NCTC12858_01173 dnaJ; Heat shock protein J K03686 dnaJ; molecular chaperone DnaJ D NCTC12858_01314 minD; Cell division inhibitor MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D NCTC12858_01546 yidC; Oxa1Ec K03217 yidC; YidC/Oxa1 family membrane protein insertase D NCTC12858_00076 htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:pcre02000] D NCTC12858_00495 Putative multidrug export ATP-binding/permease protein SAV1866 K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D NCTC12858_00859 irtA_1; Iron import ATP-binding/permease protein IrtA K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D NCTC12858_01731 irtA_2; Iron import ATP-binding/permease protein IrtA K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D NCTC12858_00494 Putative multidrug export ATP-binding/permease protein SAV1866 K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D NCTC12858_00860 msbA_1; Lipid A export ATP-binding/permease protein MsbA K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D NCTC12858_01732 Putative multidrug export ATP-binding/permease protein SAV1866 K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D NCTC12858_01815 msbA_2; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D NCTC12858_01462 yjjK_2; Uncharacterized ABC transporter ATP-binding protein YjjK K15738 uup; ABC transport system ATP-binding/permease protein D NCTC12858_01017 virulence factor Mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NCTC12858_01341 mlaE; Probable phospholipid ABC transporter permease protein mlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D NCTC12858_01342 metN; Methionine import ATP-binding protein MetN K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D NCTC12858_00572 cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein D NCTC12858_00573 cbiO; Cobalt import ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D NCTC12858_00571 cbiM; Energy-coupling factor transporter probable substrate-capture protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D NCTC12858_01458 Predicted permeases K07091 lptF; lipopolysaccharide export system permease protein D NCTC12858_01473 lipopolysaccharide ABC transporter permease K11720 lptG; lipopolysaccharide export system permease protein D NCTC12858_00115 lptB_1; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D NCTC12858_00105 lolE_1; Lipoprotein-releasing system transmembrane protein lolE K09808 lolC_E; lipoprotein-releasing system permease protein D NCTC12858_00773 lolE_2; Lipoprotein-releasing system transmembrane protein lolE K09808 lolC_E; lipoprotein-releasing system permease protein D NCTC12858_00777 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D NCTC12858_01343 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D NCTC12858_01848 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NCTC12858_00205 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein D NCTC12858_00206 yhhJ; Inner membrane transport permease yhhJ K01992 ABC-2.P; ABC-2 type transport system permease protein D NCTC12858_00768 yhaP; ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein D NCTC12858_00459 Uncharacterized ABC transporter ATP-binding protein HI_1470 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NCTC12858_00769 lptB_2; Lipopolysaccharide export system ATP-binding protein LptB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NCTC12858_01450 sufC; Probable ATP-dependent transporter SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D NCTC12858_00447 mepA_1; Multidrug export protein mepA K26939 norM; MATE family, multidrug efflux pump D NCTC12858_00663 mdtK; Multidrug-efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NCTC12858_00086 DNA-damage-inducible SOS response protein K26937 dinF; MATE family, multidrug efflux pump D NCTC12858_00921 mepA_2; Multidrug export protein mepA K26937 dinF; MATE family, multidrug efflux pump D NCTC12858_00319 fucP; L-fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease D NCTC12858_00414 nupG; Nucleoside-transport system protein nupG K11537 xapB; MFS transporter, NHS family, xanthosine permease D NCTC12858_00199 kcsA; Voltage-gated potassium channel K10716 kch; voltage-gated potassium channel D NCTC12858_00337 Mg-chelatase subunit ChlD K07114 yfbK; Ca-activated chloride channel homolog D NCTC12858_00338 Mg-chelatase subunit ChlD K07114 yfbK; Ca-activated chloride channel homolog D NCTC12858_00600 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D NCTC12858_01604 mscS; Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D NCTC12858_01832 tolQ; colicin uptake protein TolQ K03561 exbB; biopolymer transport protein ExbB D NCTC12858_01122 protein TolQ K03561 exbB; biopolymer transport protein ExbB D NCTC12858_01831 colicin uptake protein TolR K03559 exbD; biopolymer transport protein ExbD D NCTC12858_00662 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter D NCTC12858_01787 corC; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D NCTC12858_01339 yfjD; Putative Mg2+ and Co2+ transporter CorB K03699 tlyC; magnesium and cobalt exporter, CNNM family D NCTC12858_00833 PG33 K03286 TC.OOP; OmpA-OmpF porin, OOP family D NCTC12858_01818 Outer membrane cobalamin receptor protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC D NCTC12858_01096 cirA_3; Colicin I receptor precursor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D NCTC12858_00915 cirA_2; Colicin I receptor precursor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D NCTC12858_00428 cirA_1; Colicin I receptor precursor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D NCTC12858_00689 Probable TonB-dependent receptor NMB0964 precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCTC12858_00825 Outer membrane cobalamin receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCTC12858_00029 Outer membrane protein omp85 precursor K07277 SAM50; outer membrane protein insertion porin family D NCTC12858_00077 DNA uptake lipoprotein K05807 bamD; outer membrane protein assembly factor BamD D NCTC12858_01133 yohJ; Putative effector of murein hydrolase LrgA K06518 cidA; holin-like protein D NCTC12858_01539 czcD; Cadmium, cobalt and zinc/H(+)-K(+) antiporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D NCTC12858_01463 yrbG; Inner membrane protein yrbG K07301 yrbG; cation:H+ antiporter D NCTC12858_01001 nhaA; Sodium/proton antiporter nhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D NCTC12858_01448 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D NCTC12858_01430 kefB; NEM-activable K(+)/H(+) antiporter K26731 CHX; K+:H+ antiporter D NCTC12858_01437 trkG; Trk system potassium uptake protein trkG K03498 trkH; trk/ktr system potassium uptake protein D NCTC12858_01438 trkA; Trk system potassium uptake protein trkA K03499 trkA; trk/ktr system potassium uptake protein D NCTC12858_00844 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family D NCTC12858_01180 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter D NCTC12858_01181 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter D NCTC12858_01823 ychM; Putative sulfate transporter ychM K03321 TC.SULP; sulfate permease, SulP family D NCTC12858_01115 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter D NCTC12858_00399 yhgN; putative antibiotic transporter K05595 marC; multiple antibiotic resistance protein D NCTC12858_00545 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW D NCTC12858_01127 TonB family C-terminal domain K03832 tonB; periplasmic protein TonB D NCTC12858_00326 ompA; Outer membrane protein II* K03640 pal; peptidoglycan-associated lipoprotein D NCTC12858_00696 gcdB; Glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D NCTC12858_00692 Methylmalonyl-CoA carboxyltransferase 12S subunit K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D NCTC12858_00695 Methylmalonyl-CoA carboxyltransferase 1.3S subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D NCTC12858_00452 czcB; Cation efflux system protein CzcB K03585 acrA; membrane fusion protein, multidrug efflux system D NCTC12858_01819 SusD family K21572 susD; starch-binding outer membrane protein, SusD/RagB family D NCTC12858_00057 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D NCTC12858_01019 feoB_1; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D NCTC12858_01432 feoB_2; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D NCTC12858_01372 sapB; putative Mg(2+) transport ATPase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:pcre02044] D NCTC12858_00778 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA D NCTC12858_00198 ribD_1; Riboflavin biosynthesis protein RibD K01493 comEB; dCMP deaminase [EC:3.5.4.12] D NCTC12858_00517 ComEC family competence protein K02238 comEC; competence protein ComEC D NCTC12858_00782 Uncharacterized protein conserved in bacteria K11904 vgrG; type VI secretion system secreted protein VgrG D NCTC12858_01620 Uncharacterized protein conserved in bacteria K11904 vgrG; type VI secretion system secreted protein VgrG D NCTC12858_00936 Uncharacterized protein conserved in bacteria K11904 vgrG; type VI secretion system secreted protein VgrG D NCTC12858_01277 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NCTC12858_00565 secDF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D NCTC12858_00240 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NCTC12858_01443 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NCTC12858_00353 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NCTC12858_00378 ffh; Fifty-four homolog K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NCTC12858_00344 ftsY; Cell division protein FtsY homolog K03110 ftsY; fused signal recognition particle receptor D NCTC12858_00564 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NCTC12858_01546 yidC; Oxa1Ec K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:pcre02042] D NCTC12858_01787 corC; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D NCTC12858_01339 yfjD; Putative Mg2+ and Co2+ transporter CorB K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:pcre02022] D NCTC12858_01302 senX3; Signal-transduction histidine kinase senX3 K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NCTC12858_00965 kinE; Sporulation kinase E K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:pcre02035] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:pcre04812] D NCTC12858_00952 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D NCTC12858_00752 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NCTC12858_00751 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA D NCTC12858_01557 soj; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein D NCTC12858_01723 CO dehydrogenase maturation factor K03496 parA; chromosome partitioning protein D NCTC12858_01556 parB; Probable chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:pcre04147] D NCTC12858_00076 htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG D NCTC12858_01469 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NCTC12858_00103 gapA; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NCTC12858_01798 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NCTC12858_01415 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NCTC12858_00557 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NCTC12858_00798 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D NCTC12858_01157 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NCTC12858_00327 ptpA_1; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D NCTC12858_01201 ptpA_2; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D NCTC12858_01551 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D NCTC12858_00242 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu D NCTC12858_00212 hit; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D NCTC12858_01517 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCTC12858_00657 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCTC12858_01672 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D NCTC12858_00577 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D NCTC12858_00100 phoB; Alkaline phosphatase 3 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NCTC12858_01559 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NCTC12858_00953 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NCTC12858_01596 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCTC12858_00025 etfA_1; Electron transfer flavoprotein large subunit K03522 fixB; electron transfer flavoprotein alpha subunit D NCTC12858_01325 etfA_2; Electron transfer flavoprotein large subunit K03522 fixB; electron transfer flavoprotein alpha subunit D NCTC12858_00316 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NCTC12858_00672 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:pcre02048] D NCTC12858_01562 CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP K15342 cas1; CRISP-associated protein Cas1 D NCTC12858_00738 CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D NCTC12858_01563 CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D NCTC12858_00064 helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D NCTC12858_00736 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D NCTC12858_01561 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D NCTC12858_00066 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D NCTC12858_00479 hsdR; Type-1 restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D NCTC12858_00482 EcoKI restriction-modification system protein HsdS K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D NCTC12858_00484 hsdS; Type I restriction enzyme EcoKI specificity protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D NCTC12858_00480 Probable type I restriction enzyme BthVORF4518P M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D NCTC12858_00875 dpnM; Modification methylase DpnIIA K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NCTC12858_00882 hipA_1; Serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NCTC12858_00883 hipA_2; Serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NCTC12858_00752 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NCTC12858_00952 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D NCTC12858_00247 gyrA_2; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NCTC12858_01113 gyrB_1; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NCTC12858_00080 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCTC12858_01418 Uncharacterised protein K18840 ghoS; antitoxin GhoS C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:pcre04090] D NCTC12858_00327 ptpA_1; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D NCTC12858_01201 ptpA_2; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] C 01504 Antimicrobial resistance genes [BR:pcre01504] D NCTC12858_00827 transport protein TonB K02172 blaR1; bla regulator protein blaR1 D NCTC12858_00828 blaI; Regulatory protein BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D NCTC12858_01521 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D NCTC12858_00452 czcB; Cation efflux system protein CzcB K03585 acrA; membrane fusion protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pcre00537] D NCTC12858_00100 phoB; Alkaline phosphatase 3 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:pcre03100] D NCTC12858_00141 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCTC12858_00297 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCTC12858_01291 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCTC12858_01775 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCTC12858_00108 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCTC12858_00683 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCTC12858_01553 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCTC12858_00684 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCTC12858_01190 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCTC12858_01607 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCTC12858_00917 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NCTC12858_00918 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NCTC12858_00919 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NCTC12858_00920 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NCTC12858_00716 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D NCTC12858_01822 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D NCTC12858_00224 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NCTC12858_00632 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NCTC12858_00906 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NCTC12858_00908 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NCTC12858_01141 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NCTC12858_01139 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NCTC12858_00398 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NCTC12858_01654 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NCTC12858_01883 tRNA-His K14226 tRNA-His; tRNA His D NCTC12858_00109 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NCTC12858_01776 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NCTC12858_00298 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NCTC12858_01290 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NCTC12858_00522 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCTC12858_01652 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCTC12858_01140 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCTC12858_01461 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCTC12858_01653 tRNA-Ser K14228 tRNA-Leu; tRNA Leu D NCTC12858_01128 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NCTC12858_01534 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NCTC12858_01129 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NCTC12858_00442 tRNA-Met K14230 tRNA-Met; tRNA Met D NCTC12858_01006 tRNA-Met K14230 tRNA-Met; tRNA Met D NCTC12858_00552 tRNA-Met K14230 tRNA-Met; tRNA Met D NCTC12858_01648 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D NCTC12858_01436 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NCTC12858_01357 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NCTC12858_00728 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NCTC12858_00165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NCTC12858_00647 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NCTC12858_00790 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NCTC12858_01123 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NCTC12858_00243 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NCTC12858_01837 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NCTC12858_01447 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NCTC12858_00241 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D NCTC12858_01142 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D NCTC12858_00244 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D NCTC12858_01162 tRNA-Val K14237 tRNA-Val; tRNA Val D NCTC12858_01163 tRNA-Val K14237 tRNA-Val; tRNA Val D NCTC12858_00110 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NCTC12858_00299 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NCTC12858_01289 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NCTC12858_01777 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NCTC12858_00107 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NCTC12858_00296 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NCTC12858_01774 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NCTC12858_01292 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NCTC12858_00106 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NCTC12858_00295 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NCTC12858_01293 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NCTC12858_01773 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NCTC12858_00440 ssrA; transfer-messenger RNA, SsrA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D NCTC12858_01242 Homospermidine synthase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D NCTC12858_01034 msrA1; Peptide methionine sulfoxide reductase MsrA 1 K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D NCTC12858_01046 msrAB; Peptide methionine sulfoxide reductase MsrA/MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D NCTC12858_00646 Uncharacterised protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D NCTC12858_00258 bcp; Putative peroxiredoxin bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NCTC12858_01656 tpx; Thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NCTC12858_00826 ahpC; Alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D NCTC12858_00714 yhhW; Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D NCTC12858_00044 ftnA; Ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D NCTC12858_01427 pyrK_2; Dihydrdoorotate oxidase B, electron transfer subunit K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D NCTC12858_01273 pflA; Pyruvate formate-lyase 1-activating enzyme K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D NCTC12858_01205 yjaB; Uncharacterized N-acetyltransferase YjaB K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D NCTC12858_00445 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D NCTC12858_01191 apbE; Thiamine biosynthesis lipoprotein ApbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D NCTC12858_01329 DisA bacterial checkpoint controller nucleotide-binding K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D NCTC12858_01058 ymdB; O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D NCTC12858_01403 Thioesterase superfamily K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D NCTC12858_00418 acyl-CoA thioester hydrolase, YbgC/YbaW family K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D NCTC12858_00519 Predicted HD superfamily hydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D NCTC12858_01363 putative DNAse K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D NCTC12858_01125 ycfH; Uncharacterized deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D NCTC12858_01705 Phage-related lysozyme (muraminidase) K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D NCTC12858_00630 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NCTC12858_01151 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D NCTC12858_01282 Bifunctional xylanase/deacetylase precursor K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D NCTC12858_01511 yabJ; Enamine/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D NCTC12858_00341 ravA; ATPase ravA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D NCTC12858_00269 nnr; Nicotinamide nucleotide repair protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D NCTC12858_00613 nqrB_2; Na(+)-translocating NADH-quinone reductase subunit B K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D NCTC12858_00614 rnfC; Nitrogen fixation protein rnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D NCTC12858_00615 rnfB; Nitrogen fixation protein rnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D NCTC12858_00579 nqrA; Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D NCTC12858_00580 nqrB_1; Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D NCTC12858_00581 nqrC; Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D NCTC12858_00582 nqrD; Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D NCTC12858_00583 nqrE; Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D NCTC12858_00584 nqrF; Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D NCTC12858_00841 copA; Copper-exporting P-type ATPase A K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D NCTC12858_00612 electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D NCTC12858_00611 rnfE; Electron transport complex protein rnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D NCTC12858_00610 rnfA; Electron transport complex protein rnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D NCTC12858_00829 fldA; Flavodoxin-1 K03839 fldA; flavodoxin I D NCTC12858_00024 etfB_1; Electron transfer flavoprotein small subunit K03521 fixA; electron transfer flavoprotein beta subunit D NCTC12858_01324 etfB_2; Electron transfer flavoprotein small subunit K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D NCTC12858_00071 Predicted enzyme with a TIM-barrel fold K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D NCTC12858_01686 Uncharacterised protein family (UPF0104) K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism C 99988 Secondary metabolism D NCTC12858_00713 azr; NADPH azoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D NCTC12858_00253 phoA; Alkaline phosphatase precursor K22390 ACP7; acid phosphatase type 7 D NCTC12858_00715 DoxX K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D NCTC12858_00123 tig; Trigger factor K03545 tig; trigger factor D NCTC12858_01472 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D NCTC12858_01523 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D NCTC12858_01094 rmuC; DNA recombination protein rmuC K09760 rmuC; DNA recombination protein RmuC D NCTC12858_00474 Uncharacterised protein family UPF0102 K07460 yraN; putative endonuclease D NCTC12858_00308 smf; DNA protecting protein DprA K04096 smf; DNA processing protein D NCTC12858_01874 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase D NCTC12858_00686 Transposase DDE domain K07481 K07481; transposase, IS5 family D NCTC12858_00543 Transposase domain (DUF772) K07481 K07481; transposase, IS5 family C 99979 Viral proteins C 99998 Others D NCTC12858_01227 pspE_1; Thiosulfate sulfurtransferase PspE precursor K03972 pspE; phage shock protein E B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D NCTC12858_00129 dtpT; Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D NCTC12858_00743 Sodium Bile acid symporter family K03453 TC.BASS; bile acid:Na+ symporter, BASS family D NCTC12858_01040 putative transporter K07085 K07085; putative transport protein C 99978 Cell growth D NCTC12858_01795 iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D NCTC12858_00933 envC_1; Septal ring factor K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D NCTC12858_00280 typA; Tyrosine phosphorylated protein A K06207 typA; GTP-binding protein D NCTC12858_01499 ybeZ_2; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D NCTC12858_00432 ybeZ_1; PhoH-like protein K07175 phoH2; PhoH-like ATPase C 99992 Structural proteins D NCTC12858_00027 periplasmic chaperone K06142 hlpA; outer membrane protein D NCTC12858_00028 skp; p28 K06142 hlpA; outer membrane protein D NCTC12858_01789 Outer membrane protein K06142 hlpA; outer membrane protein D NCTC12858_00207 putative efflux pump membrane fusion protein K01993 ABC-2.TX; HlyD family secretion protein C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D NCTC12858_01452 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D NCTC12858_00046 Patatin K07001 K07001; NTE family protein D NCTC12858_00931 rssA; NTE family protein rssA K07001 K07001; NTE family protein D NCTC12858_01421 yjjG; Pyrimidine 5'-nucleotidase YjjG K07025 K07025; putative hydrolase of the HAD superfamily D NCTC12858_01451 sufB; FeS cluster assembly protein sufB K09014 sufB; Fe-S cluster assembly protein SufB D NCTC12858_01449 sufD; FeS cluster assembly protein sufD K09015 sufD; Fe-S cluster assembly protein SufD D NCTC12858_01678 yihY; YihY family inner membrane protein K07058 K07058; membrane protein D NCTC12858_00283 sufE; Cysteine desulfuration protein sufE K02426 sufE; cysteine desulfuration protein SufE D NCTC12858_00978 LemA family K03744 lemA; LemA protein D NCTC12858_01846 LemA family K03744 lemA; LemA protein D NCTC12858_01414 LemA family K03744 lemA; LemA protein C 99997 Function unknown D NCTC12858_00979 Domain of uncharacterised function (DUF477) K06872 K06872; uncharacterized protein D NCTC12858_00277 short chain dehydrogenase K06889 K06889; uncharacterized protein D NCTC12858_00645 exosortase A system-associated hydrolase 1 K06889 K06889; uncharacterized protein D NCTC12858_00401 ybhL; Inner membrane protein YbhL K06890 K06890; uncharacterized protein D NCTC12858_01750 Ketosteroid isomerase-related protein K06893 K06893; uncharacterized protein D NCTC12858_00232 Ketosteroid isomerase-related protein K06893 K06893; uncharacterized protein D NCTC12858_01015 tRNA 2'-O-methylase K06950 K06950; uncharacterized protein D NCTC12858_01738 Predicted exporter K07003 K07003; uncharacterized protein D NCTC12858_00855 multidrug efflux protein K07003 K07003; uncharacterized protein D NCTC12858_01210 Predicted lactoylglutathione lyase K07032 K07032; uncharacterized protein D NCTC12858_01225 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein D NCTC12858_00923 Uncharacterized metallophosphoesterase Cj0846 K07098 K07098; uncharacterized protein D NCTC12858_01354 Uncharacterised protein K07133 K07133; uncharacterized protein D NCTC12858_01385 Uncharacterised protein K07133 K07133; uncharacterized protein D NCTC12858_01728 Uncharacterised protein K07133 K07133; uncharacterized protein D NCTC12858_01503 coproporphyrinogen III oxidase K07139 K07139; uncharacterized protein D NCTC12858_01425 Putative zinc ribbon domain K07164 K07164; uncharacterized protein D NCTC12858_01362 yidD; Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D NCTC12858_01370 yqeY; Uncharacterized conserved protein K09117 K09117; uncharacterized protein D NCTC12858_01081 oxidative stress defense protein K09797 K09797; uncharacterized protein D NCTC12858_01265 cvfB; Conserved virulence factor B K00243 K00243; uncharacterized protein D NCTC12858_01256 Uncharacterized conserved protein K01163 K01163; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 1, 2024