+D GENES KO
#
KEGG Orthology (KO) - Psychromonas sp. CNPT3
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:psy00010]
D PCNPT3_05310 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PCNPT3_02595 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PCNPT3_04210 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PCNPT3_00725 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PCNPT3_12900 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PCNPT3_07800 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PCNPT3_11065 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PCNPT3_06635 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PCNPT3_05280 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PCNPT3_11070 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PCNPT3_07805 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PCNPT3_11475 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PCNPT3_10100 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PCNPT3_05300 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PCNPT3_09725 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PCNPT3_00520 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PCNPT3_07755 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PCNPT3_03205 pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PCNPT3_03210 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PCNPT3_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_01445 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_03310 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PCNPT3_01945 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PCNPT3_04145 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D PCNPT3_05735 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PCNPT3_03065 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PCNPT3_05285 aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D PCNPT3_00780 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PCNPT3_07120 PTS system glucose-specific transporter K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PCNPT3_08220 PTS glucose-specific subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:psy00020]
D PCNPT3_05015 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D PCNPT3_09820 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PCNPT3_03225 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PCNPT3_05040 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PCNPT3_05045 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PCNPT3_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_01445 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_05055 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PCNPT3_05050 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PCNPT3_05030 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PCNPT3_05035 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PCNPT3_05020 succinate dehydrogenase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PCNPT3_05025 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PCNPT3_02030 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PCNPT3_02025 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PCNPT3_02020 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PCNPT3_02015 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PCNPT3_05955 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PCNPT3_02470 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PCNPT3_00780 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PCNPT3_03205 pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PCNPT3_03210 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:psy00030]
D PCNPT3_02595 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PCNPT3_12685 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PCNPT3_10875 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PCNPT3_02645 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PCNPT3_10870 transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PCNPT3_10770 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PCNPT3_10970 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PCNPT3_05760 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PCNPT3_10975 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PCNPT3_03065 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PCNPT3_08890 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PCNPT3_00585 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PCNPT3_00580 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PCNPT3_07800 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PCNPT3_11065 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PCNPT3_00725 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PCNPT3_12900 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PCNPT3_04210 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:psy00040]
D PCNPT3_10315 5-keto-4-deoxyuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D PCNPT3_00570 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D PCNPT3_06910 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D PCNPT3_06940 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D PCNPT3_06915 D-mannonate oxidoreductase NAD-binding protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D PCNPT3_11680 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PCNPT3_03960 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PCNPT3_12685 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:psy00051]
D PCNPT3_00970 mannose-6-phosphate isomer K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PCNPT3_04210 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PCNPT3_00725 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PCNPT3_12900 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PCNPT3_01205 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PCNPT3_07800 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PCNPT3_11065 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PCNPT3_06635 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PCNPT3_00985 phosphotransferase system fructose-specific component IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D PCNPT3_01210 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:psy00052]
D PCNPT3_05735 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PCNPT3_05730 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PCNPT3_05725 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PCNPT3_01660 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PCNPT3_05720 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PCNPT3_05520 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PCNPT3_03960 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PCNPT3_03065 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PCNPT3_05310 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PCNPT3_02650 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PCNPT3_04210 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PCNPT3_10345 tagatose 6-phosphate aldolase subunit KbaZ K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D PCNPT3_10320 PTS system, N-acetylgalactosamine-specific IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D PCNPT3_11890 N-acetyl-galactosamine K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D PCNPT3_10335 PTS system N-acetylgalactosamine-specific transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D PCNPT3_11910 PTS system N-acetylgalactosamine-specific transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D PCNPT3_10330 PTS system N-acetylgalactosamine-specific transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D PCNPT3_11905 PTS system N-acetylgalactosamine-specific transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D PCNPT3_10325 PTS system, N-acetylgalactosamine-specific IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D PCNPT3_11895 PTS system N-acetylgalactosamine-specific transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
D PCNPT3_10340 agaS; tagatose-6-phosphate ketose/aldose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:psy00053]
D PCNPT3_11680 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PCNPT3_02605 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:psy00500]
D PCNPT3_03960 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PCNPT3_07120 PTS system glucose-specific transporter K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PCNPT3_03065 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PCNPT3_05310 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PCNPT3_02595 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:psy00520]
D PCNPT3_05900 glycoside hydrolase family protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PCNPT3_07120 PTS system glucose-specific transporter K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PCNPT3_11145 PTS system N-acetylglucosamine-specific transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PCNPT3_06970 NAGC-like transcriptional regulator K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D PCNPT3_11155 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PCNPT3_11150 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PCNPT3_00720 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PCNPT3_09130 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PCNPT3_11440 bifunctional N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PCNPT3_07835 murP; PTS system N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D PCNPT3_07840 murQ; N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D PCNPT3_12465 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D PCNPT3_09735 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PCNPT3_12395 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PCNPT3_12655 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D PCNPT3_12660 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D PCNPT3_12670 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D PCNPT3_11750 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PCNPT3_01340 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PCNPT3_05445 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PCNPT3_01335 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PCNPT3_05450 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PCNPT3_11745 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PCNPT3_05215 UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PCNPT3_05230 pseudaminic acid biosynthesis-associated protein PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D PCNPT3_05225 NeuA K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D PCNPT3_08220 PTS glucose-specific subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PCNPT3_05310 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PCNPT3_03065 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PCNPT3_03960 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PCNPT3_11680 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PCNPT3_05730 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PCNPT3_05725 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PCNPT3_01660 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PCNPT3_05720 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PCNPT3_05520 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PCNPT3_02605 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PCNPT3_02595 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PCNPT3_00970 mannose-6-phosphate isomer K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:psy00620]
D PCNPT3_03205 pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PCNPT3_03210 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PCNPT3_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_01445 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_01985 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PCNPT3_01945 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PCNPT3_04145 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D PCNPT3_03310 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PCNPT3_04990 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PCNPT3_01965 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D PCNPT3_01960 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PCNPT3_05300 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PCNPT3_09725 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PCNPT3_00520 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PCNPT3_06540 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PCNPT3_04870 D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D PCNPT3_12645 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PCNPT3_10855 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PCNPT3_04590 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PCNPT3_11105 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PCNPT3_12410 beta-lactamase domain-containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PCNPT3_10945 phosphotransacetylase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PCNPT3_02470 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PCNPT3_05955 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PCNPT3_02030 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PCNPT3_02025 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PCNPT3_02020 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PCNPT3_02015 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PCNPT3_01670 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PCNPT3_00780 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PCNPT3_07755 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PCNPT3_07685 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:psy00630]
D PCNPT3_02470 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PCNPT3_05015 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D PCNPT3_09820 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PCNPT3_04400 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PCNPT3_12680 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PCNPT3_05255 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PCNPT3_01250 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PCNPT3_04415 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PCNPT3_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_01445 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_10930 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PCNPT3_00585 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PCNPT3_03270 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:psy00640]
D PCNPT3_04990 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PCNPT3_01965 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D PCNPT3_01960 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PCNPT3_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_01445 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_01985 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PCNPT3_03705 alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D PCNPT3_06870 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PCNPT3_05050 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PCNPT3_05055 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PCNPT3_09820 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PCNPT3_04920 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D PCNPT3_12325 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:psy00650]
D PCNPT3_06870 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PCNPT3_10710 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PCNPT3_01945 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PCNPT3_05030 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PCNPT3_05035 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PCNPT3_05020 succinate dehydrogenase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PCNPT3_05025 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PCNPT3_02030 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PCNPT3_02025 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PCNPT3_02020 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PCNPT3_02015 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PCNPT3_01985 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PCNPT3_07655 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PCNPT3_07650 acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:psy00660]
D PCNPT3_07655 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PCNPT3_07650 acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PCNPT3_05050 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PCNPT3_05055 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PCNPT3_07675 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PCNPT3_07670 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PCNPT3_07680 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:psy00562]
D PCNPT3_04235 inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PCNPT3_06635 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:psy00190]
D PCNPT3_05910 bifunctional respiratory FAD-dependent NADH dehydrogenase/cupric reductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PCNPT3_05030 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PCNPT3_05035 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PCNPT3_05020 succinate dehydrogenase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PCNPT3_05025 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PCNPT3_02030 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PCNPT3_02025 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PCNPT3_02020 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PCNPT3_02015 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PCNPT3_09695 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PCNPT3_09690 bifunctional ubiquinol-cytochrome c reductase/cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PCNPT3_09685 ubiquinol--cytochrome c reductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D PCNPT3_08750 cytochrome c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PCNPT3_08755 cytochrome c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PCNPT3_08760 cbb3-type cytochrome oxidase subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PCNPT3_08765 cytochrome c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PCNPT3_09400 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PCNPT3_09395 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PCNPT3_09390 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D PCNPT3_00170 ATP synthase F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PCNPT3_00160 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PCNPT3_00165 ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PCNPT3_00175 ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PCNPT3_00155 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PCNPT3_00190 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PCNPT3_00180 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PCNPT3_00185 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PCNPT3_10915 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:psy00710]
D PCNPT3_11070 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PCNPT3_05280 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PCNPT3_07800 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PCNPT3_11065 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PCNPT3_00725 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PCNPT3_12900 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PCNPT3_10875 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PCNPT3_02645 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PCNPT3_10770 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PCNPT3_06635 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PCNPT3_12685 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PCNPT3_10870 transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PCNPT3_01670 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PCNPT3_00780 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PCNPT3_10945 phosphotransacetylase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PCNPT3_02470 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:psy00720]
D PCNPT3_07755 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PCNPT3_01670 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PCNPT3_02470 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PCNPT3_05955 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PCNPT3_05030 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PCNPT3_05035 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PCNPT3_05020 succinate dehydrogenase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PCNPT3_05025 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PCNPT3_02030 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PCNPT3_02025 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PCNPT3_02020 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PCNPT3_02015 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PCNPT3_05055 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PCNPT3_05050 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PCNPT3_03225 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PCNPT3_09820 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PCNPT3_12220 formate dehydrogenase K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D PCNPT3_12225 formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D PCNPT3_08175 methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PCNPT3_01960 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PCNPT3_04990 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PCNPT3_01965 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:psy00680]
D PCNPT3_05390 glutathione-dependent formaldehyde-activating enzyme K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22]
D PCNPT3_03310 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PCNPT3_03305 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D PCNPT3_12220 formate dehydrogenase K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D PCNPT3_12225 formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D PCNPT3_04415 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PCNPT3_10100 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PCNPT3_01670 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PCNPT3_02470 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PCNPT3_07800 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PCNPT3_11065 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PCNPT3_00725 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PCNPT3_12900 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PCNPT3_04210 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PCNPT3_00635 trimethylamine N-oxide reductase I catalytic subunit K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D PCNPT3_00640 cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D PCNPT3_00630 torD; chaperone protein TorD K03533 torD; TorA specific chaperone
D PCNPT3_04990 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PCNPT3_01965 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D PCNPT3_01960 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PCNPT3_07755 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PCNPT3_07805 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PCNPT3_11475 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PCNPT3_10775 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PCNPT3_03335 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PCNPT3_07150 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:psy00910]
D PCNPT3_06490 nitrate reductase catalytic subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D PCNPT3_06485 nitrate reductase periplasmic cytochrome c-type subunit NapB K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D PCNPT3_00740 nitrite reductase subunit NirD K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D PCNPT3_00745 nirD; nitrite reductase small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D PCNPT3_01215 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D PCNPT3_09950 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PCNPT3_01250 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PCNPT3_03230 glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PCNPT3_03235 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PCNPT3_02425 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PCNPT3_09435 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:psy00920]
D PCNPT3_06085 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PCNPT3_02635 thiosulfate:cyanide sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D PCNPT3_02330 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PCNPT3_07105 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:psy00061]
D PCNPT3_12600 hypothetical protein K02078 acpP; acyl carrier protein
D PCNPT3_00120 acyl carrier protein K02078 acpP; acyl carrier protein
D PCNPT3_00125 acyl carrier protein K02078 acpP; acyl carrier protein
D PCNPT3_04085 acyl carrier protein K02078 acpP; acyl carrier protein
D PCNPT3_04075 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PCNPT3_04070 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PCNPT3_05880 beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PCNPT3_00070 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PCNPT3_04090 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PCNPT3_00055 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PCNPT3_04080 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PCNPT3_00060 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PCNPT3_05925 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PCNPT3_10190 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PCNPT3_10710 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PCNPT3_06815 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PCNPT3_06860 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:psy00071]
D PCNPT3_06865 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PCNPT3_06870 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PCNPT3_06815 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PCNPT3_06860 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PCNPT3_03310 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PCNPT3_01945 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PCNPT3_04145 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:psy00561]
D PCNPT3_10930 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PCNPT3_12330 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D PCNPT3_12335 dihydroxyacetone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D PCNPT3_12325 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D PCNPT3_04065 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PCNPT3_12635 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PCNPT3_03000 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PCNPT3_10015 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:psy00564]
D PCNPT3_11455 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PCNPT3_02395 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PCNPT3_12635 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PCNPT3_03000 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PCNPT3_10015 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PCNPT3_02365 alpha/beta hydrolase fold protein K01048 pldB; lysophospholipase [EC:3.1.1.5]
D PCNPT3_00495 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PCNPT3_10220 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PCNPT3_05965 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PCNPT3_01645 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D PCNPT3_03765 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PCNPT3_08095 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D PCNPT3_02650 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:psy00592]
D PCNPT3_06865 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:psy01040]
D PCNPT3_03795 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PCNPT3_01700 acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:psy00230]
D PCNPT3_01505 nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PCNPT3_12745 nudE; adenosine nucleotide hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D PCNPT3_10975 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PCNPT3_03065 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PCNPT3_08890 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PCNPT3_06015 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PCNPT3_01835 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PCNPT3_03975 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PCNPT3_05700 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D PCNPT3_01545 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D PCNPT3_03980 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PCNPT3_00660 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PCNPT3_06305 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PCNPT3_09845 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PCNPT3_01830 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PCNPT3_07330 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PCNPT3_10035 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PCNPT3_12740 hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D PCNPT3_05715 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D PCNPT3_11590 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PCNPT3_10980 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PCNPT3_02130 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PCNPT3_10895 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PCNPT3_10120 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PCNPT3_01525 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PCNPT3_01555 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PCNPT3_10115 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PCNPT3_00765 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PCNPT3_03300 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PCNPT3_12355 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PCNPT3_03295 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PCNPT3_12360 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PCNPT3_09265 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PCNPT3_04410 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D PCNPT3_12480 (p)ppGpp synthetase II and guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PCNPT3_01705 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PCNPT3_02275 relA; (p)ppGpp synthetase I/GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D PCNPT3_00395 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D PCNPT3_02225 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PCNPT3_09555 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D PCNPT3_09585 hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D PCNPT3_07860 cpdB; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PCNPT3_09915 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PCNPT3_02960 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PCNPT3_01510 cyclic AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PCNPT3_03855 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D PCNPT3_02425 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:psy00240]
D PCNPT3_04135 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PCNPT3_04130 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PCNPT3_02415 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PCNPT3_02410 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PCNPT3_07425 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PCNPT3_07445 dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PCNPT3_01290 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PCNPT3_10385 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PCNPT3_10235 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PCNPT3_01525 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PCNPT3_02960 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PCNPT3_03375 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PCNPT3_05850 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D PCNPT3_10105 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PCNPT3_10410 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PCNPT3_02155 uridine/cytidine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D PCNPT3_12890 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D PCNPT3_10035 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PCNPT3_11650 dUMP phosphatase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D PCNPT3_11005 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D PCNPT3_08740 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PCNPT3_07860 cpdB; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PCNPT3_09585 hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D PCNPT3_11000 zinc-binding CMP/dCMP deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PCNPT3_09265 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PCNPT3_09175 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PCNPT3_03300 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PCNPT3_12355 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PCNPT3_03295 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PCNPT3_12360 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PCNPT3_04105 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PCNPT3_00375 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PCNPT3_10990 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D PCNPT3_08660 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PCNPT3_11215 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:psy00250]
D PCNPT3_00415 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PCNPT3_11810 ansA; cytoplasmic asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PCNPT3_09825 asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D PCNPT3_03280 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PCNPT3_08170 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PCNPT3_02895 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PCNPT3_02510 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D PCNPT3_01680 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PCNPT3_01685 bifunctional argininosuccinate lyase/N-acetylglutamate synthase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D PCNPT3_02225 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PCNPT3_09845 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PCNPT3_02415 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PCNPT3_02410 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PCNPT3_03230 glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PCNPT3_03235 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PCNPT3_09950 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PCNPT3_01920 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PCNPT3_01250 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PCNPT3_04135 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PCNPT3_04130 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PCNPT3_00720 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PCNPT3_06015 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:psy00260]
D PCNPT3_11800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PCNPT3_03780 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PCNPT3_05890 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PCNPT3_11450 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PCNPT3_03785 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PCNPT3_03790 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PCNPT3_04415 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PCNPT3_10930 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PCNPT3_07805 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PCNPT3_11475 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PCNPT3_10775 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PCNPT3_03335 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PCNPT3_07150 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PCNPT3_06890 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PCNPT3_06885 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D PCNPT3_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_01445 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_10695 amidinotransferase K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D PCNPT3_05965 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PCNPT3_02170 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PCNPT3_07640 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PCNPT3_04695 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PCNPT3_03915 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PCNPT3_03920 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PCNPT3_08240 2,4-diaminobutyrate 4-transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D PCNPT3_08245 pyridoxal-dependent decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:psy00270]
D PCNPT3_02330 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PCNPT3_07105 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PCNPT3_01800 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PCNPT3_11055 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PCNPT3_04195 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PCNPT3_08840 methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PCNPT3_02130 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PCNPT3_06125 chlorohydrolase/deaminase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D PCNPT3_05960 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PCNPT3_09335 DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PCNPT3_11800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PCNPT3_03780 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PCNPT3_05890 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PCNPT3_11450 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PCNPT3_11790 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PCNPT3_03820 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PCNPT3_06085 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PCNPT3_04695 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PCNPT3_02470 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PCNPT3_02170 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PCNPT3_10775 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PCNPT3_03335 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:psy00280]
D PCNPT3_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_01445 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_06870 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PCNPT3_06865 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PCNPT3_09850 6-phosphogluconate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:psy00290]
D PCNPT3_07640 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PCNPT3_07675 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PCNPT3_07670 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PCNPT3_07680 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PCNPT3_07655 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PCNPT3_07650 acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PCNPT3_07660 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PCNPT3_07645 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PCNPT3_00030 avtA; valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D PCNPT3_08170 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PCNPT3_07685 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:psy00300]
D PCNPT3_11800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PCNPT3_03780 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PCNPT3_05890 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PCNPT3_11450 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PCNPT3_06315 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PCNPT3_12775 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PCNPT3_03885 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PCNPT3_07130 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PCNPT3_00320 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PCNPT3_00325 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PCNPT3_02870 putative aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D PCNPT3_03470 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PCNPT3_03475 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:psy00310]
D PCNPT3_05045 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PCNPT3_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_01445 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_06870 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PCNPT3_04695 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
C 00220 Arginine biosynthesis [PATH:psy00220]
D PCNPT3_02420 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PCNPT3_01680 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PCNPT3_01685 bifunctional argininosuccinate lyase/N-acetylglutamate synthase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D PCNPT3_02430 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D PCNPT3_01250 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PCNPT3_04135 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PCNPT3_04130 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PCNPT3_02425 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PCNPT3_09950 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PCNPT3_08170 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00330 Arginine and proline metabolism [PATH:psy00330]
D PCNPT3_10695 amidinotransferase K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D PCNPT3_04195 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PCNPT3_11055 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PCNPT3_08250 saccharopine dehydrogenase K13746 cansdh; carboxynorspermidine synthase [EC:1.5.1.43]
D PCNPT3_08255 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D PCNPT3_01575 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PCNPT3_01920 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PCNPT3_02815 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D PCNPT3_10135 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PCNPT3_10130 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:psy00340]
D PCNPT3_07375 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PCNPT3_07410 phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D PCNPT3_07400 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PCNPT3_07395 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PCNPT3_07405 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PCNPT3_07390 imidazole glycerol-phosphate dehydratase/histidinol phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D PCNPT3_03340 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PCNPT3_07385 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PCNPT3_07380 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PCNPT3_00095 histidine ammonia-lyase protein K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
C 00350 Tyrosine metabolism [PATH:psy00350]
D PCNPT3_03340 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PCNPT3_07385 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PCNPT3_05960 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PCNPT3_03310 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PCNPT3_01945 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PCNPT3_04145 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:psy00360]
D PCNPT3_03340 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PCNPT3_07385 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PCNPT3_05960 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00380 Tryptophan metabolism [PATH:psy00380]
D PCNPT3_05045 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PCNPT3_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_01445 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_06870 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:psy00400]
D PCNPT3_08160 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PCNPT3_02440 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PCNPT3_12700 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PCNPT3_01865 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PCNPT3_12865 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PCNPT3_12705 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PCNPT3_03345 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PCNPT3_08980 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PCNPT3_03940 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PCNPT3_03935 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PCNPT3_03930 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PCNPT3_03925 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D PCNPT3_03915 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PCNPT3_03920 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PCNPT3_02445 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D PCNPT3_02825 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D PCNPT3_03340 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PCNPT3_07385 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PCNPT3_05960 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:psy00410]
D PCNPT3_10830 aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PCNPT3_10825 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PCNPT3_06870 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:psy00430]
D PCNPT3_06195 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PCNPT3_02895 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PCNPT3_09950 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PCNPT3_01960 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PCNPT3_04990 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PCNPT3_01965 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:psy00440]
D PCNPT3_09910 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D PCNPT3_05535 hypothetical protein K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D PCNPT3_09905 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:psy00450]
D PCNPT3_02770 bifunctional cysteine desulfurase/selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PCNPT3_02945 cysteine desulfurase SufS subfamily protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PCNPT3_05240 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PCNPT3_12090 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PCNPT3_12195 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PCNPT3_04880 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:psy00460]
D PCNPT3_06195 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PCNPT3_11810 ansA; cytoplasmic asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PCNPT3_09825 asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D PCNPT3_04415 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:psy00470]
D PCNPT3_12530 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PCNPT3_03505 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PCNPT3_04695 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PCNPT3_02880 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PCNPT3_03485 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PCNPT3_00320 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PCNPT3_00325 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PCNPT3_05545 hypothetical protein K21898 orr; ornithine racemase [EC:5.1.1.12]
C 00480 Glutathione metabolism [PATH:psy00480]
D PCNPT3_06195 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PCNPT3_11790 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PCNPT3_03820 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PCNPT3_02690 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PCNPT3_11600 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PCNPT3_06845 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PCNPT3_04120 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PCNPT3_04125 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PCNPT3_08130 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PCNPT3_04925 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PCNPT3_11210 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PCNPT3_03225 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PCNPT3_01440 glutaredoxin family protein K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D PCNPT3_04195 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:psy00511]
D PCNPT3_02650 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis [PATH:psy00540]
D PCNPT3_10185 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PCNPT3_03525 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PCNPT3_10195 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PCNPT3_06555 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PCNPT3_10180 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PCNPT3_04170 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PCNPT3_10675 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PCNPT3_07505 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PCNPT3_09770 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PCNPT3_04180 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PCNPT3_02625 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PCNPT3_12545 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PCNPT3_05975 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D PCNPT3_10615 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D PCNPT3_10000 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PCNPT3_02610 3-deoxy-D-manno-octulosonic-acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D PCNPT3_04315 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PCNPT3_01495 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PCNPT3_02390 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PCNPT3_02630 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PCNPT3_02520 O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:psy00541]
D PCNPT3_03960 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PCNPT3_01660 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PCNPT3_05720 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PCNPT3_05520 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PCNPT3_11680 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PCNPT3_02605 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PCNPT3_00970 mannose-6-phosphate isomer K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PCNPT3_11440 bifunctional N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PCNPT3_11750 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PCNPT3_01340 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PCNPT3_05445 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PCNPT3_01335 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PCNPT3_05450 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PCNPT3_11745 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PCNPT3_05215 UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PCNPT3_05230 pseudaminic acid biosynthesis-associated protein PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D PCNPT3_05225 NeuA K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
C 00550 Peptidoglycan biosynthesis [PATH:psy00550]
D PCNPT3_09735 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PCNPT3_12395 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PCNPT3_03500 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PCNPT3_03485 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PCNPT3_03470 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PCNPT3_03505 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PCNPT3_03475 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PCNPT3_10225 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PCNPT3_12620 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PCNPT3_03480 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PCNPT3_03495 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PCNPT3_12735 penicillin-binding protein, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PCNPT3_10790 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PCNPT3_03435 Fis family transcriptional regulator K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PCNPT3_03465 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PCNPT3_10630 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PCNPT3_02350 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:psy00552]
D PCNPT3_12620 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PCNPT3_01375 UDP-N-acetyl-D-mannosamine transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:psy00543]
D PCNPT3_01415 undecaprenyl-phosphate galactose phosphotransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D PCNPT3_02330 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:psy00730]
D PCNPT3_11295 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PCNPT3_05590 bifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PCNPT3_11290 thiamine-phosphate pyrophosphorylase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D PCNPT3_04250 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PCNPT3_05110 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PCNPT3_11270 thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D PCNPT3_08085 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PCNPT3_11275 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PCNPT3_05615 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PCNPT3_08100 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PCNPT3_01650 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PCNPT3_03320 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PCNPT3_09915 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PCNPT3_05610 transcriptional activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:psy00740]
D PCNPT3_04425 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PCNPT3_00310 HAD family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D PCNPT3_09925 3,4 dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D PCNPT3_04435 riboflavin synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PCNPT3_04430 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PCNPT3_02055 bifunctional riboflavin kinase and FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PCNPT3_01740 fre; FMN reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D PCNPT3_05615 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PCNPT3_01505 nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PCNPT3_10905 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:psy00750]
D PCNPT3_08150 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PCNPT3_11645 pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PCNPT3_05885 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D PCNPT3_03335 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PCNPT3_03865 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PCNPT3_02940 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D PCNPT3_03790 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:psy00760]
D PCNPT3_00415 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PCNPT3_09345 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PCNPT3_03550 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PCNPT3_11590 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PCNPT3_10980 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PCNPT3_10035 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PCNPT3_03725 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PCNPT3_02960 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PCNPT3_01820 nucleotide phosphate derivative pyrophosphohydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PCNPT3_11445 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PCNPT3_11610 competence-damaged protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PCNPT3_04380 5,6-dimethylbenzimidazole phosphoribosyltransferase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PCNPT3_08870 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PCNPT3_12750 soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D PCNPT3_09940 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PCNPT3_09945 pyridine nucleotide transhydrogenase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:psy00770]
D PCNPT3_07655 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PCNPT3_07650 acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PCNPT3_07660 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PCNPT3_07645 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PCNPT3_10820 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PCNPT3_07210 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PCNPT3_10825 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PCNPT3_12895 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D PCNPT3_00370 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PCNPT3_02960 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PCNPT3_00345 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PCNPT3_03555 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PCNPT3_08125 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D PCNPT3_10830 aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:psy00780]
D PCNPT3_06040 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D PCNPT3_05880 beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PCNPT3_00070 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PCNPT3_04090 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PCNPT3_00055 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PCNPT3_04080 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PCNPT3_00060 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PCNPT3_10190 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PCNPT3_11420 bioH protein K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D PCNPT3_06035 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PCNPT3_06025 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PCNPT3_06045 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PCNPT3_06030 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D PCNPT3_12390 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:psy00785]
D PCNPT3_10640 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PCNPT3_10645 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PCNPT3_03680 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PCNPT3_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_01445 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_03205 pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PCNPT3_03210 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PCNPT3_05040 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PCNPT3_05045 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
C 00790 Folate biosynthesis [PATH:psy00790]
D PCNPT3_08825 GTP cyclohydrolase K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D PCNPT3_03320 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PCNPT3_12630 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PCNPT3_12625 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PCNPT3_10815 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PCNPT3_09135 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PCNPT3_03850 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PCNPT3_06000 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PCNPT3_12905 glutamine amidotransferase of anthranilate synthase K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D PCNPT3_05950 para-aminobenzoate synthase subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D PCNPT3_04095 class IV aminotransferase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D PCNPT3_03245 radical SAM protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PCNPT3_03240 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PCNPT3_09565 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PCNPT3_07045 beta-lactamase domain-containing protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D PCNPT3_06505 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PCNPT3_06465 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PCNPT3_06455 molybdopterin biosynthesis MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PCNPT3_06470 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PCNPT3_08165 molybdenum cofactor synthesis domain-containing protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PCNPT3_06475 molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:psy00670]
D PCNPT3_03850 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PCNPT3_08175 methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PCNPT3_04415 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PCNPT3_03975 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PCNPT3_01830 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PCNPT3_00690 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PCNPT3_11215 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PCNPT3_03270 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PCNPT3_10765 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:psy00860]
D PCNPT3_04510 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PCNPT3_07530 shikimate/quinate 5-dehydrogenase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PCNPT3_03010 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PCNPT3_02555 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PCNPT3_00595 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PCNPT3_00600 uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PCNPT3_01825 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PCNPT3_12460 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D PCNPT3_12505 protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D PCNPT3_09865 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PCNPT3_00605 uroporphyrin-III C-methyltransferase HemX K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PCNPT3_02475 bifunctional siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase/siroheme ferrochelatase/uroporphyrinogen methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D PCNPT3_12425 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PCNPT3_08155 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D PCNPT3_08845 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:psy00130]
D PCNPT3_01455 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D PCNPT3_01450 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PCNPT3_01735 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D PCNPT3_10905 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PCNPT3_10715 ubiquinone biosynthesis visC protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D PCNPT3_03325 bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D PCNPT3_10720 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PCNPT3_02590 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PCNPT3_09625 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D PCNPT3_11340 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D PCNPT3_11345 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D PCNPT3_11350 alpha/beta hydrolase fold protein K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D PCNPT3_12535 O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D PCNPT3_12540 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D PCNPT3_11355 dihydroxynaphthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D PCNPT3_08725 phenylacetic acid degradation-like protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D PCNPT3_11335 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:psy00900]
D PCNPT3_08085 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PCNPT3_10215 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PCNPT3_10050 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PCNPT3_08885 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PCNPT3_10045 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PCNPT3_03605 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PCNPT3_02075 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PCNPT3_10905 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PCNPT3_08075 geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PCNPT3_02240 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PCNPT3_10225 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:psy00907]
D PCNPT3_06870 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PCNPT3_06865 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PCNPT3_10875 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PCNPT3_02645 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D PCNPT3_11340 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:psy00332]
D PCNPT3_10135 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PCNPT3_10130 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:psy00261]
D PCNPT3_11800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PCNPT3_03780 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PCNPT3_05890 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PCNPT3_11450 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PCNPT3_06315 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PCNPT3_12775 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:psy00521]
D PCNPT3_05310 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PCNPT3_03065 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PCNPT3_04235 inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PCNPT3_05310 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:psy00401]
D PCNPT3_02445 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D PCNPT3_03340 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PCNPT3_07385 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PCNPT3_05960 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PCNPT3_03940 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PCNPT3_03935 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PCNPT3_04075 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PCNPT3_04080 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PCNPT3_00060 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PCNPT3_12600 hypothetical protein K02078 acpP; acyl carrier protein
D PCNPT3_00120 acyl carrier protein K02078 acpP; acyl carrier protein
D PCNPT3_00125 acyl carrier protein K02078 acpP; acyl carrier protein
D PCNPT3_04085 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:psy00999]
D PCNPT3_01800 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PCNPT3_12865 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
D PCNPT3_05545 hypothetical protein K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:psy00362]
D PCNPT3_06865 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PCNPT3_04275 ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S
D PCNPT3_06870 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00627 Aminobenzoate degradation [PATH:psy00627]
D PCNPT3_06540 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PCNPT3_10905 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:psy00625]
D PCNPT3_04145 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D PCNPT3_03310 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PCNPT3_01945 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D PCNPT3_06865 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:psy00930]
D PCNPT3_06870 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:psy00626]
D PCNPT3_04145 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D PCNPT3_03310 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PCNPT3_01945 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:psy03020]
D PCNPT3_12000 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PCNPT3_11995 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PCNPT3_01155 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PCNPT3_00760 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:psy03010]
D PCNPT3_10405 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PCNPT3_10245 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PCNPT3_01060 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PCNPT3_01150 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PCNPT3_01115 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PCNPT3_11860 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PCNPT3_11970 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PCNPT3_01100 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PCNPT3_09710 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PCNPT3_01025 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PCNPT3_01145 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PCNPT3_11975 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PCNPT3_01140 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PCNPT3_01095 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PCNPT3_09085 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PCNPT3_01465 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PCNPT3_01075 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PCNPT3_11870 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PCNPT3_01050 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PCNPT3_02045 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PCNPT3_02540 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PCNPT3_12015 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PCNPT3_01045 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PCNPT3_01030 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PCNPT3_01035 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PCNPT3_01090 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PCNPT3_01105 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PCNPT3_12005 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PCNPT3_11875 50S ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D PCNPT3_12010 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PCNPT3_12020 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PCNPT3_09715 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PCNPT3_01080 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PCNPT3_01125 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PCNPT3_01065 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PCNPT3_01160 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PCNPT3_01110 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PCNPT3_01480 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PCNPT3_05170 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PCNPT3_02245 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PCNPT3_01055 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PCNPT3_01040 50S ribosomal protein L25 K02892 RP-L23; large subunit ribosomal protein L23
D PCNPT3_01085 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PCNPT3_08895 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D PCNPT3_02250 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PCNPT3_00365 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PCNPT3_01070 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D PCNPT3_01120 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PCNPT3_02725 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PCNPT3_10950 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PCNPT3_04060 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PCNPT3_00360 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PCNPT3_12930 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PCNPT3_05165 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PCNPT3_01135 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PCNPT3_02730 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PCNPT3_r13153 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13139 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13151 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13141 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13147 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13143 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13145 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13149 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13137 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13167 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13173 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13163 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13171 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13161 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13155 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13159 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13157 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13165 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13169 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13115 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13123 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13119 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13131 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13129 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13133 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13125 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13127 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13117 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13113 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13121 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:psy00970]
D PCNPT3_t12985 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PCNPT3_t12953 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PCNPT3_t13097 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PCNPT3_t13061 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PCNPT3_t13089 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PCNPT3_t13091 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PCNPT3_t13093 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PCNPT3_t12961 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PCNPT3_t12991 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PCNPT3_t13105 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PCNPT3_t13017 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PCNPT3_t13027 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PCNPT3_t13023 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PCNPT3_t13019 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PCNPT3_t13025 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PCNPT3_t13021 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PCNPT3_t13075 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PCNPT3_t13081 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PCNPT3_t13077 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PCNPT3_t13083 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PCNPT3_t13079 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PCNPT3_t12969 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PCNPT3_t13033 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PCNPT3_t13041 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PCNPT3_t13035 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PCNPT3_t12937 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PCNPT3_t12941 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PCNPT3_t13067 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PCNPT3_t12939 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PCNPT3_t13087 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PCNPT3_t12943 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PCNPT3_t12955 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PCNPT3_t12947 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PCNPT3_t12967 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PCNPT3_t12949 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PCNPT3_t13107 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PCNPT3_t12993 tRNA-His K14226 tRNA-His; tRNA His
D PCNPT3_t13103 tRNA-His K14226 tRNA-His; tRNA His
D PCNPT3_t12951 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PCNPT3_t13063 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PCNPT3_t13099 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PCNPT3_t12971 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t13005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t13007 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t13047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t12995 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t13031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t13043 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t13037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t12959 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t13049 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PCNPT3_t13059 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PCNPT3_t13053 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PCNPT3_t13057 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PCNPT3_t13051 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PCNPT3_t13055 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PCNPT3_t12957 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t12983 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13011 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13009 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13013 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13015 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13045 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13029 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13039 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13069 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PCNPT3_t13073 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PCNPT3_t12989 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PCNPT3_t12997 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PCNPT3_t13101 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PCNPT3_t13065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PCNPT3_t12965 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PCNPT3_t13001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PCNPT3_t12999 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PCNPT3_t12987 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PCNPT3_t13095 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PCNPT3_t12945 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PCNPT3_t13071 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PCNPT3_t13111 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PCNPT3_t13085 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PCNPT3_t12963 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PCNPT3_t13109 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PCNPT3_t13003 tRNA-Val K14237 tRNA-Val; tRNA Val
D PCNPT3_t12973 tRNA-Val K14237 tRNA-Val; tRNA Val
D PCNPT3_t12975 tRNA-Val K14237 tRNA-Val; tRNA Val
D PCNPT3_t12977 tRNA-Val K14237 tRNA-Val; tRNA Val
D PCNPT3_t12981 tRNA-Val K14237 tRNA-Val; tRNA Val
D PCNPT3_t12979 tRNA-Val K14237 tRNA-Val; tRNA Val
D PCNPT3_04510 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PCNPT3_11135 glutaminyl-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PCNPT3_11805 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PCNPT3_09445 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PCNPT3_06020 asnC; asparaginyl-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PCNPT3_00040 glyQ; glycyl-tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PCNPT3_00035 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PCNPT3_05155 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PCNPT3_05650 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PCNPT3_12195 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PCNPT3_06545 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PCNPT3_04880 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PCNPT3_00690 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PCNPT3_02680 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PCNPT3_03740 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PCNPT3_02060 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PCNPT3_11920 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PCNPT3_00300 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PCNPT3_02370 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PCNPT3_03610 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PCNPT3_04365 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PCNPT3_04370 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PCNPT3_08835 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PCNPT3_12675 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PCNPT3_04915 tryptophanyl-tRNA ligase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:psy03060]
D PCNPT3_01130 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PCNPT3_12030 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PCNPT3_09125 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PCNPT3_05195 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D PCNPT3_05200 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PCNPT3_05190 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PCNPT3_12915 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PCNPT3_03540 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PCNPT3_11460 protein-export protein chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PCNPT3_11760 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PCNPT3_02795 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PCNPT3_07715 arsenical pump-driving ATPase(arsenite-translocating ATPase) K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PCNPT3_02575 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D PCNPT3_02570 twin-arginine translocation protein subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D PCNPT3_02565 Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D PCNPT3_02920 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PCNPT3_02065 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:psy04122]
D PCNPT3_04250 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PCNPT3_06085 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PCNPT3_01665 regulator of information in SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PCNPT3_11980 intracellular sulfur oxidation protein of DsrH family protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D PCNPT3_11985 intraceullular sulfur oxidation protein of DsrE family protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D PCNPT3_11990 intracellular sulfur oxidation protein of DsrE family protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D PCNPT3_08185 sulfur oxidation protein of DsrC family protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D PCNPT3_09835 tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PCNPT3_06455 molybdopterin biosynthesis MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PCNPT3_06505 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PCNPT3_06460 molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D PCNPT3_12205 hypothetical protein K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11]
D PCNPT3_11285 adenylyl transferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PCNPT3_06465 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PCNPT3_06470 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PCNPT3_05110 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PCNPT3_11280 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:psy03018]
D PCNPT3_11230 nucleotide phosphate derivative pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PCNPT3_05245 Rne/Rng family ribonuclease protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D PCNPT3_01710 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D PCNPT3_10100 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PCNPT3_09080 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PCNPT3_02145 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PCNPT3_03685 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PCNPT3_08490 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PCNPT3_06380 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PCNPT3_11845 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PCNPT3_11435 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PCNPT3_12495 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PCNPT3_11815 23S rRNA Gm2251-methyltransferase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PCNPT3_01730 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PCNPT3_04210 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PCNPT3_08860 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PCNPT3_09965 chaperonin Cpn60, GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PCNPT3_02205 RNA chaperone Hfq K03666 hfq; host factor-I protein
D PCNPT3_10810 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:psy03030]
D PCNPT3_01765 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_07565 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_11120 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_07900 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_10170 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PCNPT3_07325 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PCNPT3_04110 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PCNPT3_03730 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PCNPT3_01780 putative DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PCNPT3_02685 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PCNPT3_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PCNPT3_12525 replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PCNPT3_02530 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PCNPT3_11640 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PCNPT3_11115 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PCNPT3_10175 ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PCNPT3_01755 multifunctional 5'-3' exonuclease/3'-5' polymerase/3'-5' exonuclease K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PCNPT3_06825 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:psy03410]
D PCNPT3_09300 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PCNPT3_03805 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PCNPT3_11040 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PCNPT3_00350 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PCNPT3_05565 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PCNPT3_04225 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PCNPT3_12475 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PCNPT3_01755 multifunctional 5'-3' exonuclease/3'-5' polymerase/3'-5' exonuclease K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PCNPT3_02310 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PCNPT3_06825 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:psy03420]
D PCNPT3_06755 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PCNPT3_11240 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PCNPT3_04045 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PCNPT3_03760 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PCNPT3_00305 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PCNPT3_09310 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PCNPT3_01755 multifunctional 5'-3' exonuclease/3'-5' polymerase/3'-5' exonuclease K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PCNPT3_06825 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:psy03430]
D PCNPT3_11615 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PCNPT3_02195 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PCNPT3_11235 DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D PCNPT3_00305 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PCNPT3_09310 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PCNPT3_07095 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D PCNPT3_10125 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PCNPT3_08070 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PCNPT3_02310 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PCNPT3_11640 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PCNPT3_10170 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PCNPT3_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PCNPT3_07325 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PCNPT3_03730 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PCNPT3_04110 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PCNPT3_01765 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_07565 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_11120 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_07900 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_02685 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PCNPT3_01780 putative DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PCNPT3_06825 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PCNPT3_12690 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:psy03440]
D PCNPT3_02310 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PCNPT3_11640 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PCNPT3_00015 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PCNPT3_02935 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PCNPT3_07315 recombination protein RecR K06187 recR; recombination protein RecR
D PCNPT3_11605 recombination protein RecA K03553 recA; recombination protein RecA
D PCNPT3_01755 multifunctional 5'-3' exonuclease/3'-5' polymerase/3'-5' exonuclease K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PCNPT3_09415 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PCNPT3_09410 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PCNPT3_09425 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PCNPT3_01225 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PCNPT3_08710 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PCNPT3_08715 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PCNPT3_08705 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PCNPT3_10170 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PCNPT3_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PCNPT3_07325 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PCNPT3_03730 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PCNPT3_04110 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PCNPT3_01765 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_07565 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_11120 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_07900 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_02685 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PCNPT3_01780 putative DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PCNPT3_11015 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PCNPT3_11865 single-strand binding protein/primosomal replication protein n K02686 priB; primosomal replication protein N
D PCNPT3_06530 primosomal replication protein N'' K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:psy03250]
D PCNPT3_04035 cyclophilin type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:psy02010]
D PCNPT3_05605 hydroxymethylpyrimidine ABC transporter substrate-binding component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D PCNPT3_05600 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D PCNPT3_05595 ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D PCNPT3_06450 molybdenum ABC transporter periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PCNPT3_06445 molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein
D PCNPT3_06440 molybdate ABC transporter ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PCNPT3_09900 Fe3+ ABC transporter periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein
D PCNPT3_10270 ABC iron(III) transporter periplasmic binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PCNPT3_09890 ABC transporter binding protein inner membrane protein K02011 afuB; iron(III) transport system permease protein
D PCNPT3_10265 iron(III) ABC transporter inner membrane binding component K02011 afuB; iron(III) transport system permease protein
D PCNPT3_09895 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PCNPT3_10260 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PCNPT3_06050 tbpA; thiamine transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D PCNPT3_06055 thiP; thiamine transporter membrane protein K02063 thiP; thiamine transport system permease protein
D PCNPT3_06060 thiamin ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PCNPT3_09750 ABC-type transporter periplasmic protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PCNPT3_09755 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PCNPT3_09760 ABC-type transporter inner membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PCNPT3_09745 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D PCNPT3_09765 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PCNPT3_08225 sugar ABC transporter extracellular solute-binding family 1 protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PCNPT3_05755 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D PCNPT3_05750 rbsC; ribose ABC transporter permease protein K10440 rbsC; ribose transport system permease protein
D PCNPT3_05745 D-ribose transporter ATP binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PCNPT3_05740 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D PCNPT3_11090 methyl-galactoside ABC transporter galactose-binding periplasmic protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D PCNPT3_11080 galactoside ABC transporter, permease protein K10541 mglC; methyl-galactoside transport system permease protein
D PCNPT3_11085 galactose/methyl galaxtoside transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D PCNPT3_00490 glycerol-3-phosphate ABC transporter extracellular solute-binding family 1 protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PCNPT3_00485 sn-glycerol-3-phosphate transport system, binding protein inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PCNPT3_00480 sn-glycerol-3-phosphate ABC transporter binding protein inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PCNPT3_00475 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PCNPT3_00270 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PCNPT3_00240 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D PCNPT3_00245 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D PCNPT3_00250 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PCNPT3_02465 arginine ABC transporter solute-binding protein K09997 artI; arginine transport system substrate-binding protein
D PCNPT3_09035 ABC amino acid transporter extracellular solute-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D PCNPT3_09040 polar amino acid ABC transporter inner membrane protein K09970 aapQ; general L-amino acid transport system permease protein
D PCNPT3_09045 polar amino acid ABC transporter inner membrane protein K09971 aapM; general L-amino acid transport system permease protein
D PCNPT3_09050 ABC transporter for amino acids ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PCNPT3_09070 ABC amino acid transporter extracellular solute-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D PCNPT3_09060 polar amino acid ABC transporter inner membrane protein K10023 aotM; arginine/ornithine transport system permease protein
D PCNPT3_09065 polar amino acid ABC transporter inner membrane protein K10024 aotQ; arginine/ornithine transport system permease protein
D PCNPT3_09075 ABC transporter for amino acids ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D PCNPT3_07490 metQ; DL-methionine transporter substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein
D PCNPT3_08580 ABC transporter substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PCNPT3_07485 ABC-type metal ion transport system,permease component K02072 metI; D-methionine transport system permease protein
D PCNPT3_07480 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D PCNPT3_04285 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PCNPT3_04290 oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PCNPT3_04295 oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PCNPT3_04300 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D PCNPT3_04305 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D PCNPT3_06605 peptide ABC transporter extracellular solute-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PCNPT3_06610 peptide ABC transporter protein inner membrane binding component K19227 sapB; cationic peptide transport system permease protein
D PCNPT3_06615 peptide ABC transporter protein inner membrane binding component SapC K19228 sapC; cationic peptide transport system permease protein
D PCNPT3_06620 ABC oligopeptide/dipeptide transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D PCNPT3_06625 ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D PCNPT3_06280 Iron transport protein, periplasmic-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D PCNPT3_06290 iron-compound ABC transporter ATP-binding protein K11605 sitC; manganese/iron transport system permease protein
D PCNPT3_06295 iron (chelated) ABC transporter permease K11606 sitD; manganese/iron transport system permease protein
D PCNPT3_06285 iron-compound ABC transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D PCNPT3_05425 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PCNPT3_05415 polysialic acid transport protein KpsM K09688 kpsM; capsular polysaccharide transport system permease protein
D PCNPT3_05420 polysialic acid transport ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D PCNPT3_06735 lipoprotein releasing system, transmembrane protein, LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PCNPT3_06745 lipoprotein releasing system, transmembrane protein, LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PCNPT3_06740 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PCNPT3_10445 Heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D PCNPT3_10450 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D PCNPT3_10455 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D PCNPT3_10460 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PCNPT3_02695 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein
D PCNPT3_02700 lipopolysaccharide ABC transporter permease K11720 lptG; lipopolysaccharide export system permease protein
D PCNPT3_09785 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PCNPT3_02805 cell division ABC transporter component permease FtsX K09811 ftsX; cell division transport system permease protein
D PCNPT3_02800 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PCNPT3_04165 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PCNPT3_09485 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PCNPT3_04460 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PCNPT3_12045 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:psy02060]
D PCNPT3_07115 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PCNPT3_07110 phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PCNPT3_07120 PTS system glucose-specific transporter K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PCNPT3_08220 PTS glucose-specific subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PCNPT3_11145 PTS system N-acetylglucosamine-specific transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PCNPT3_07835 murP; PTS system N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D PCNPT3_10320 PTS system, N-acetylgalactosamine-specific IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D PCNPT3_11890 N-acetyl-galactosamine K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D PCNPT3_10335 PTS system N-acetylgalactosamine-specific transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D PCNPT3_11910 PTS system N-acetylgalactosamine-specific transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D PCNPT3_10330 PTS system N-acetylgalactosamine-specific transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D PCNPT3_11905 PTS system N-acetylgalactosamine-specific transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D PCNPT3_10325 PTS system, N-acetylgalactosamine-specific IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D PCNPT3_11895 PTS system N-acetylgalactosamine-specific transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
D PCNPT3_01200 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D PCNPT3_01210 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PCNPT3_00985 phosphotransferase system fructose-specific component IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D PCNPT3_01205 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PCNPT3_00980 PTS system, IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PCNPT3_09795 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:psy03070]
D PCNPT3_01500 type I secretion outer membrane protein, TolC family protein K12340 tolC; outer membrane protein
D PCNPT3_00895 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D PCNPT3_00890 general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D PCNPT3_00905 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D PCNPT3_00910 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D PCNPT3_00915 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D PCNPT3_00920 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D PCNPT3_00925 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D PCNPT3_00930 general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D PCNPT3_00935 general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D PCNPT3_00940 general secretion pathway M protein K02462 gspM; general secretion pathway protein M
D PCNPT3_00900 general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PCNPT3_05195 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D PCNPT3_05200 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PCNPT3_12030 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PCNPT3_09125 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PCNPT3_01130 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PCNPT3_05190 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PCNPT3_12915 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PCNPT3_03540 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PCNPT3_02795 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PCNPT3_11460 protein-export protein chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PCNPT3_11760 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PCNPT3_02575 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D PCNPT3_02570 twin-arginine translocation protein subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D PCNPT3_02565 Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D PCNPT3_08390 vgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PCNPT3_08470 type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D PCNPT3_08435 hypothetical protein K11906 vasD; type VI secretion system protein VasD
D PCNPT3_08400 IcmF-like protein K11891 impL; type VI secretion system protein ImpL
D PCNPT3_08425 DotU K11892 impK; type VI secretion system protein ImpK
D PCNPT3_08420 ClpV protein K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:psy02020]
D PCNPT3_00265 phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PCNPT3_00260 transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PCNPT3_03320 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PCNPT3_00270 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PCNPT3_07775 hypothetical protein K07790 pagO; putative membrane protein PagO
D PCNPT3_02320 copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PCNPT3_09500 RND family efflux transporter MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D PCNPT3_09495 CzcA family heavy metal efflux pump K07787 cusA; copper/silver efflux system protein
D PCNPT3_10375 adenylate kinase K02406 fliC; flagellin
D PCNPT3_03175 A-type flagellin K02406 fliC; flagellin
D PCNPT3_10515 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D PCNPT3_10490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D PCNPT3_08065 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D PCNPT3_00640 cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D PCNPT3_00635 trimethylamine N-oxide reductase I catalytic subunit K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D PCNPT3_00630 torD; chaperone protein TorD K03533 torD; TorA specific chaperone
D PCNPT3_08820 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PCNPT3_03775 two-component response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D PCNPT3_00005 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PCNPT3_08520 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D PCNPT3_06510 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D PCNPT3_06515 LuxR family DNA-binding response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D PCNPT3_02030 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PCNPT3_02025 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PCNPT3_02020 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PCNPT3_02015 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PCNPT3_04940 regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D PCNPT3_00515 regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D PCNPT3_04945 sensory histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D PCNPT3_04950 UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D PCNPT3_06065 uhpT; sugar phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D PCNPT3_02385 putative lipoprotein K06080 rcsF; RcsF protein
D PCNPT3_02265 hybrid sensory histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PCNPT3_03755 LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D PCNPT3_11795 carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D PCNPT3_00875 Flp/Fap pilin component superfamily protein K02651 flp; pilus assembly protein Flp/PilA
D PCNPT3_00870 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PCNPT3_00865 Flp pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D PCNPT3_00855 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D PCNPT3_00850 Flp pilus assembly protein TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PCNPT3_00845 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D PCNPT3_00840 Flp pilus assembly protein TadC K12511 tadC; tight adherence protein C
D PCNPT3_10255 UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D PCNPT3_02115 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D PCNPT3_01240 sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PCNPT3_01235 Fis family nitrogen metabolism transcriptional regulator NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PCNPT3_01250 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PCNPT3_00510 phosphoglycerate transport regulatory protein PgtC K08478 pgtC; phosphoglycerate transport regulatory protein PgtC
D PCNPT3_00505 phosphoglycerate transport regulatory protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D PCNPT3_00500 phosphoglycerate transport system transcriptional regulatory protein PgtA K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D PCNPT3_09790 RNA polymerase sigma-54 subunit RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D PCNPT3_11175 fimbrial protein pilin: general secretion pathway protein H K02650 pilA; type IV pilus assembly protein PilA
D PCNPT3_03115 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PCNPT3_02235 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_05075 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_01675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_06095 methyl-accepting chemotaxisprotein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_06105 methyl-accepting chemotaxisprotein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03410 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03690 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03695 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03700 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_07870 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03745 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_08485 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_08590 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_08620 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_12575 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_12845 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_04970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_12095 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D PCNPT3_10670 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D PCNPT3_05320 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D PCNPT3_10470 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D PCNPT3_10475 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D PCNPT3_10500 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PCNPT3_10510 response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PCNPT3_06840 CheY-like chemotaxis protein, response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PCNPT3_10495 chemotaxis-specific protein-glutamate methyltransferase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PCNPT3_09255 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PCNPT3_03110 chemotaxis CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PCNPT3_08940 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PCNPT3_10285 FleQ protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PCNPT3_10280 sensory box sensor histidine kinase in two-component regulatory system K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PCNPT3_10275 two-component system flagellar response regulator FlrC K10943 flrC; two-component system, response regulator FlrC
D PCNPT3_11375 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PCNPT3_09695 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PCNPT3_09690 bifunctional ubiquinol-cytochrome c reductase/cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PCNPT3_09685 ubiquinol--cytochrome c reductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D PCNPT3_08750 cytochrome c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PCNPT3_08755 cytochrome c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PCNPT3_08760 cbb3-type cytochrome oxidase subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PCNPT3_08765 cytochrome c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PCNPT3_09400 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PCNPT3_09395 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PCNPT3_09390 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D PCNPT3_01500 type I secretion outer membrane protein, TolC family protein K12340 tolC; outer membrane protein
D PCNPT3_01325 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D PCNPT3_11750 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PCNPT3_01340 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PCNPT3_05445 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PCNPT3_01335 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PCNPT3_05450 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PCNPT3_11745 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PCNPT3_03100 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D PCNPT3_09695 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:psy02024]
D PCNPT3_02205 RNA chaperone Hfq K03666 hfq; host factor-I protein
D PCNPT3_03940 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PCNPT3_03935 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PCNPT3_08160 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PCNPT3_02440 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PCNPT3_04455 hemagglutinin/hemolysin-like protein K20276 bapA; large repetitive protein
D PCNPT3_06815 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PCNPT3_06860 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PCNPT3_11375 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PCNPT3_11180 Fur family ferric uptake regulator protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PCNPT3_04425 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PCNPT3_04285 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PCNPT3_04290 oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PCNPT3_04295 oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PCNPT3_04300 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D PCNPT3_04305 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D PCNPT3_08090 family 5 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PCNPT3_07285 dipeptide-binding protein DppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PCNPT3_07290 peptide ABC transporter protein inner membrane binding component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PCNPT3_07295 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PCNPT3_07280 peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PCNPT3_12915 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PCNPT3_12030 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PCNPT3_09125 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PCNPT3_01130 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PCNPT3_05190 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PCNPT3_03540 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PCNPT3_02795 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PCNPT3_11460 protein-export protein chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PCNPT3_11760 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:psy02030]
D PCNPT3_02235 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_05075 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_01675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_06095 methyl-accepting chemotaxisprotein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_06105 methyl-accepting chemotaxisprotein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03410 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03690 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03695 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03700 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_07870 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03745 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_08485 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_08590 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_08620 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_12575 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_12845 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_04970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_12095 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D PCNPT3_10670 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D PCNPT3_05320 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D PCNPT3_05755 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D PCNPT3_11090 methyl-galactoside ABC transporter galactose-binding periplasmic protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D PCNPT3_10500 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PCNPT3_10470 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D PCNPT3_10475 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D PCNPT3_10510 response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PCNPT3_06840 CheY-like chemotaxis protein, response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PCNPT3_10505 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D PCNPT3_11185 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D PCNPT3_10495 chemotaxis-specific protein-glutamate methyltransferase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PCNPT3_09255 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PCNPT3_03110 chemotaxis CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PCNPT3_08940 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PCNPT3_03115 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PCNPT3_10595 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D PCNPT3_10565 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PCNPT3_10560 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PCNPT3_10490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D PCNPT3_08065 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D PCNPT3_10485 OmpA family protein K02557 motB; chemotaxis protein MotB
D PCNPT3_08060 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:psy02040]
D PCNPT3_10605 flagellar hook-basal body protein K02408 fliE; flagellar hook-basal body complex protein FliE
D PCNPT3_10600 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D PCNPT3_10595 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D PCNPT3_10590 polar flagellar assembly protein, FliH K02411 fliH; flagellar assembly protein FliH
D PCNPT3_10585 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PCNPT3_10580 flagellar protein K02413 fliJ; flagellar protein FliJ
D PCNPT3_10575 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D PCNPT3_10570 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D PCNPT3_01460 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D PCNPT3_10565 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PCNPT3_10560 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PCNPT3_10555 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ
D PCNPT3_10550 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PCNPT3_10545 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PCNPT3_10540 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PCNPT3_10530 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PCNPT3_10535 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PCNPT3_03105 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PCNPT3_03120 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D PCNPT3_03125 flagellar biosynthesis; cell-proximal portion of basal-body rod K02388 flgC; flagellar basal-body rod protein FlgC
D PCNPT3_03130 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D PCNPT3_03135 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D PCNPT3_03140 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D PCNPT3_03145 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PCNPT3_04505 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D PCNPT3_03150 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D PCNPT3_03160 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D PCNPT3_03165 flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D PCNPT3_03170 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL
D PCNPT3_03090 hypothetical protein K09860 flgP; outer membrane protein FlgP
D PCNPT3_11940 sodium-type polar flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D PCNPT3_07175 sodium-type flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D PCNPT3_10375 adenylate kinase K02406 fliC; flagellin
D PCNPT3_03175 A-type flagellin K02406 fliC; flagellin
D PCNPT3_10365 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2
D PCNPT3_10290 hypothetical protein K02422 fliS; flagellar secretion chaperone FliS
D PCNPT3_10490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D PCNPT3_08065 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D PCNPT3_10485 OmpA family protein K02557 motB; chemotaxis protein MotB
D PCNPT3_08060 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PCNPT3_03100 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D PCNPT3_03095 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D PCNPT3_02525 RNA polymerase sigma-70 factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PCNPT3_10285 FleQ protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PCNPT3_09790 RNA polymerase sigma-54 subunit RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D PCNPT3_10275 two-component system flagellar response regulator FlrC K10943 flrC; two-component system, response regulator FlrC
D PCNPT3_10515 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PCNPT3_10100 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:psy01501]
D PCNPT3_08045 major facilitator superfamily transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PCNPT3_05900 glycoside hydrolase family protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PCNPT3_04285 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PCNPT3_04290 oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PCNPT3_04295 oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PCNPT3_04300 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D PCNPT3_04305 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D PCNPT3_01430 TetR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D PCNPT3_01425 secretion protein HlyD-like protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PCNPT3_01420 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D PCNPT3_01500 type I secretion outer membrane protein, TolC family protein K12340 tolC; outer membrane protein
D PCNPT3_12735 penicillin-binding protein, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PCNPT3_03435 Fis family transcriptional regulator K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PCNPT3_03465 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:psy01502]
D PCNPT3_03505 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PCNPT3_12530 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PCNPT3_03475 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PCNPT3_03480 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PCNPT3_03495 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:psy01503]
D PCNPT3_10000 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PCNPT3_06605 peptide ABC transporter extracellular solute-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PCNPT3_06610 peptide ABC transporter protein inner membrane binding component K19227 sapB; cationic peptide transport system permease protein
D PCNPT3_06615 peptide ABC transporter protein inner membrane binding component SapC K19228 sapC; cationic peptide transport system permease protein
D PCNPT3_06620 ABC oligopeptide/dipeptide transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D PCNPT3_06625 ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D PCNPT3_02320 copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PCNPT3_02190 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PCNPT3_12885 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PCNPT3_04035 cyclophilin type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PCNPT3_01425 secretion protein HlyD-like protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PCNPT3_01420 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D PCNPT3_01500 type I secretion outer membrane protein, TolC family protein K12340 tolC; outer membrane protein
D PCNPT3_10185 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:psy01000]
C 01001 Protein kinases [BR:psy01001]
D PCNPT3_08050 hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PCNPT3_11505 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PCNPT3_01315 putative polysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PCNPT3_00265 phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PCNPT3_08820 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PCNPT3_06510 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D PCNPT3_04945 sensory histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D PCNPT3_02265 hybrid sensory histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PCNPT3_04860 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D PCNPT3_06375 cell autolysis regulator LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D PCNPT3_01240 sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PCNPT3_00505 phosphoglycerate transport regulatory protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D PCNPT3_10500 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PCNPT3_10280 sensory box sensor histidine kinase in two-component regulatory system K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:psy01009]
D PCNPT3_04210 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PCNPT3_09920 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PCNPT3_07150 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:psy01002]
D PCNPT3_02065 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PCNPT3_01530 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PCNPT3_12235 hycI; hydrogenase 3 maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D PCNPT3_10115 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PCNPT3_06015 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PCNPT3_03230 glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PCNPT3_00720 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PCNPT3_03280 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PCNPT3_06990 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D PCNPT3_06845 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PCNPT3_12430 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D PCNPT3_01280 peptidase M16 domain-containing protein K01407 ptrA; protease III [EC:3.4.24.55]
D PCNPT3_12035 exported protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D PCNPT3_02690 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PCNPT3_11600 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PCNPT3_07130 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PCNPT3_04120 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PCNPT3_04125 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PCNPT3_01805 peptidase M23B K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D PCNPT3_05495 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PCNPT3_10250 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PCNPT3_10725 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PCNPT3_11550 ATP-dependent M41 family peptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PCNPT3_09140 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PCNPT3_06410 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PCNPT3_08815 peptidase M48, Ste24p K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D PCNPT3_10210 putative membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PCNPT3_09730 periplasmic serine protease DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D PCNPT3_02900 oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D PCNPT3_10630 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PCNPT3_02350 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PCNPT3_08685 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PCNPT3_08675 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PCNPT3_05930 ATP-dependent protease La K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D PCNPT3_00955 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D PCNPT3_02920 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PCNPT3_06580 carboxy-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PCNPT3_05920 signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D PCNPT3_05985 inner membrane peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-]
D PCNPT3_11755 membrane serine peptidase K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D PCNPT3_00290 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D PCNPT3_06195 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PCNPT3_06590 protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PCNPT3_06765 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PCNPT3_06430 protease K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D PCNPT3_06425 protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D PCNPT3_03420 C69 family peptidase K03592 pmbA; PmbA protein
D PCNPT3_03390 C69 family peptidase K03568 tldD; TldD protein
D PCNPT3_02220 HflC protein K04087 hflC; modulator of FtsH protease HflC
D PCNPT3_02215 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:psy01003]
D PCNPT3_12830 dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D PCNPT3_10790 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PCNPT3_12735 penicillin-binding protein, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PCNPT3_01375 UDP-N-acetyl-D-mannosamine transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:psy01005]
D PCNPT3_10185 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PCNPT3_10180 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PCNPT3_03525 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PCNPT3_10195 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PCNPT3_06555 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PCNPT3_04170 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PCNPT3_12545 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PCNPT3_05975 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D PCNPT3_10615 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D PCNPT3_02625 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PCNPT3_10000 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PCNPT3_02610 3-deoxy-D-manno-octulosonic-acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D PCNPT3_07505 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PCNPT3_04180 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PCNPT3_09770 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PCNPT3_10675 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PCNPT3_02615 glycosyl transferase family protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D PCNPT3_02520 O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D PCNPT3_02620 glycosyl transferase family protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D PCNPT3_04315 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PCNPT3_02390 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PCNPT3_01495 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PCNPT3_02630 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PCNPT3_12175 family 2 glycosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D PCNPT3_12825 glycosyl transferase family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:psy01011]
D PCNPT3_09735 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PCNPT3_12395 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PCNPT3_03500 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PCNPT3_03485 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PCNPT3_03470 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PCNPT3_03505 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PCNPT3_12530 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PCNPT3_02880 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PCNPT3_03480 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PCNPT3_03495 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PCNPT3_12620 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PCNPT3_02050 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D PCNPT3_12735 penicillin-binding protein, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PCNPT3_10790 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PCNPT3_03435 Fis family transcriptional regulator K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PCNPT3_03465 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PCNPT3_10630 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PCNPT3_02350 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PCNPT3_01805 peptidase M23B K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D PCNPT3_03665 lytic murein transglycosylase, soluble K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PCNPT3_04010 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PCNPT3_07795 membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D PCNPT3_11100 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D PCNPT3_01540 lytic transglycosylase K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D PCNPT3_04100 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PCNPT3_03425 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PCNPT3_02190 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PCNPT3_10110 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:psy01004]
D PCNPT3_04075 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PCNPT3_04070 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PCNPT3_05880 beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PCNPT3_00070 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PCNPT3_04090 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PCNPT3_00055 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PCNPT3_04080 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PCNPT3_00060 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PCNPT3_05925 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PCNPT3_10190 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PCNPT3_10710 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PCNPT3_03795 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PCNPT3_01700 acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D PCNPT3_06815 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PCNPT3_06860 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PCNPT3_04065 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PCNPT3_12635 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PCNPT3_03000 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:psy01008]
D PCNPT3_06775 polyunsaturated fatty acid synthase PfaD K15329 pksE; trans-AT polyketide synthase, acyltransferase and oxidoreductase domains
C 01006 Prenyltransferases [BR:psy01006]
D PCNPT3_08075 geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PCNPT3_02240 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PCNPT3_10225 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PCNPT3_02200 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PCNPT3_11335 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PCNPT3_01450 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:psy01007]
D PCNPT3_04510 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PCNPT3_11135 glutaminyl-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PCNPT3_10805 glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PCNPT3_08835 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PCNPT3_12675 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PCNPT3_04915 tryptophanyl-tRNA ligase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PCNPT3_06545 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PCNPT3_00300 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PCNPT3_04880 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PCNPT3_02060 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PCNPT3_02680 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PCNPT3_03740 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PCNPT3_11920 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PCNPT3_09445 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PCNPT3_06020 asnC; asparaginyl-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PCNPT3_03610 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PCNPT3_00040 glyQ; glycyl-tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PCNPT3_00035 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PCNPT3_05650 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PCNPT3_02370 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PCNPT3_05155 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PCNPT3_11805 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PCNPT3_04365 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PCNPT3_04370 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PCNPT3_00030 avtA; valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D PCNPT3_08170 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PCNPT3_05960 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PCNPT3_03340 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PCNPT3_07385 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PCNPT3_06890 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PCNPT3_06035 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PCNPT3_08240 2,4-diaminobutyrate 4-transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D PCNPT3_06025 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PCNPT3_03010 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PCNPT3_05535 hypothetical protein K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D PCNPT3_09905 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D PCNPT3_03335 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:psy00194]
D PCNPT3_00155 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PCNPT3_00160 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PCNPT3_00165 ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PCNPT3_00170 ATP synthase F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PCNPT3_00175 ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PCNPT3_00180 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PCNPT3_00185 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PCNPT3_00190 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PCNPT3_00195 F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:psy03000]
D PCNPT3_09335 DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PCNPT3_07665 DNA-binding transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D PCNPT3_01165 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PCNPT3_12860 transcriptional regulator CysB-like protein K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D PCNPT3_05540 transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D PCNPT3_11915 DNA-binding transcriptional regulator AgaR K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D PCNPT3_11095 lacI; lac repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D PCNPT3_05765 transcriptional regulator for D-ribose, periplasmic binding protein, LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PCNPT3_07890 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PCNPT3_01195 DNA-binding transcriptional regulator FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D PCNPT3_04815 DNA-binding transcriptional repressor EbgR K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D PCNPT3_05625 fatty acid metabolism regulator K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D PCNPT3_03200 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PCNPT3_06935 transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D PCNPT3_01430 TetR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D PCNPT3_00380 slmA; division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator
D PCNPT3_04935 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PCNPT3_09830 DNA-binding transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D PCNPT3_11660 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PCNPT3_07780 Putative HTH-type transcriptional regulator ybaO K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D PCNPT3_04325 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PCNPT3_06980 zntR; zinc-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D PCNPT3_03035 Fur family ferric uptake regulator protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PCNPT3_11180 Fur family ferric uptake regulator protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PCNPT3_00565 DNA-binding transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D PCNPT3_11375 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PCNPT3_08790 fumarate/nitrate reduction transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PCNPT3_06395 Crp/Fnr family transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D PCNPT3_04245 BadM/Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D PCNPT3_02490 transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D PCNPT3_07700 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PCNPT3_07845 RpiR family transcriptional regulator protein K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D PCNPT3_12390 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PCNPT3_01850 factor-for-inversion stimulation protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PCNPT3_04580 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D PCNPT3_10285 FleQ protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PCNPT3_08415 transcriptional regulator K11908 vasH; sigma-54 dependent transcriptional regulator
D PCNPT3_12215 NifA subfamily transcriptional regulator K15836 fhlA; formate hydrogenlyase transcriptional activator
D PCNPT3_08625 transcriptional regulator K06714 rocR; arginine utilization regulatory protein
D PCNPT3_06200 transcriptional regulator, XRE family protein K07726 K07726; putative transcriptional regulator
D PCNPT3_06710 virulence gene repressor RsaL K07726 K07726; putative transcriptional regulator
D PCNPT3_12855 transcriptional regulator K07727 K07727; putative transcriptional regulator
D PCNPT3_08285 hypothetical protein K07729 K07729; putative transcriptional regulator
D PCNPT3_00390 transcriptional repressor protein MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D PCNPT3_01920 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PCNPT3_00210 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PCNPT3_02460 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D PCNPT3_11160 DNA-binding transcriptional dual regulator NagC K02565 nagC; N-acetylglucosamine repressor
D PCNPT3_05610 transcriptional activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D PCNPT3_12350 DNA-binding transcriptional regulator DhaR K05880 dhaR; transcriptional activator for dhaKLM operon
D PCNPT3_08010 DNA-binding protein K07733 alpA; prophage regulatory protein
D PCNPT3_03815 hypothetical protein K07735 algH; putative transcriptional regulator
D PCNPT3_10800 RNA polymerase-binding dnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PCNPT3_05935 dnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor
D PCNPT3_04420 ATP-cone domain-containing protein K07738 nrdR; transcriptional repressor NrdR
D PCNPT3_10140 DNA-binding transcriptional regulator Crl K11926 crl; sigma factor-binding protein Crl
D PCNPT3_03450 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:psy03021]
D PCNPT3_01155 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PCNPT3_12000 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PCNPT3_11995 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PCNPT3_00760 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PCNPT3_02525 RNA polymerase sigma-70 factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PCNPT3_10020 RNA polymerase sigma-38 factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D PCNPT3_00420 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PCNPT3_02820 RNA polymerase sigma-32 factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D PCNPT3_09790 RNA polymerase sigma-54 subunit RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D PCNPT3_10515 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D PCNPT3_09930 ATP-dependent helicase HepA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D PCNPT3_09115 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D PCNPT3_04440 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D PCNPT3_12025 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D PCNPT3_09680 stringent starvation protein A K03599 sspA; stringent starvation protein A
D PCNPT3_09675 stringent starvation protein B K03600 sspB; stringent starvation protein B
D PCNPT3_00425 anti sigma-E protein, RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D PCNPT3_00430 sigma E regulatory protein MucB/RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D PCNPT3_00435 sigma-E factor regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D PCNPT3_10800 RNA polymerase-binding dnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PCNPT3_05935 dnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor
D PCNPT3_09155 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PCNPT3_01940 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D PCNPT3_01730 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:psy03019]
D PCNPT3_05245 Rne/Rng family ribonuclease protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D PCNPT3_03380 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PCNPT3_02925 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PCNPT3_11845 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PCNPT3_01655 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PCNPT3_08270 hypothetical protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D PCNPT3_01710 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D PCNPT3_02145 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PCNPT3_03685 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PCNPT3_08490 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PCNPT3_06380 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PCNPT3_11435 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PCNPT3_12495 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PCNPT3_11815 23S rRNA Gm2251-methyltransferase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PCNPT3_10100 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PCNPT3_09080 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PCNPT3_01730 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PCNPT3_04210 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PCNPT3_08860 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PCNPT3_09965 chaperonin Cpn60, GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PCNPT3_02205 RNA chaperone Hfq K03666 hfq; host factor-I protein
D PCNPT3_10810 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PCNPT3_11230 nucleotide phosphate derivative pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PCNPT3_11795 carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D PCNPT3_10655 regulatory protein CsrD K18765 csrD; RNase E specificity factor CsrD
D PCNPT3_02345 ribonuclease activity regulator protein RraA K02553 rraA; regulator of ribonuclease activity A
D PCNPT3_02995 RNase E inhibitor protein K09893 rraB; regulator of ribonuclease activity B
D PCNPT3_09800 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D PCNPT3_03250 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D PCNPT3_10795 ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:psy03011]
D PCNPT3_10405 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PCNPT3_10245 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PCNPT3_01060 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PCNPT3_01150 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PCNPT3_01115 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PCNPT3_11860 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PCNPT3_11970 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PCNPT3_01100 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PCNPT3_09710 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PCNPT3_01025 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PCNPT3_01145 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PCNPT3_11975 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PCNPT3_01140 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PCNPT3_01095 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PCNPT3_09085 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PCNPT3_01465 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PCNPT3_01075 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PCNPT3_11870 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PCNPT3_01050 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PCNPT3_02045 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PCNPT3_02540 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PCNPT3_12015 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PCNPT3_01045 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PCNPT3_01030 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PCNPT3_01035 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PCNPT3_01090 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PCNPT3_01105 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PCNPT3_11875 50S ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D PCNPT3_12010 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PCNPT3_12020 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PCNPT3_12005 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PCNPT3_09715 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PCNPT3_01080 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PCNPT3_01125 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PCNPT3_01065 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PCNPT3_01160 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PCNPT3_01110 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PCNPT3_01480 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PCNPT3_05170 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PCNPT3_02245 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PCNPT3_01055 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PCNPT3_01040 50S ribosomal protein L25 K02892 RP-L23; large subunit ribosomal protein L23
D PCNPT3_01085 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PCNPT3_02250 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PCNPT3_00365 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PCNPT3_01070 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D PCNPT3_01120 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PCNPT3_02725 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PCNPT3_10950 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PCNPT3_04060 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PCNPT3_00360 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PCNPT3_12930 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PCNPT3_05165 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PCNPT3_01135 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PCNPT3_02730 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PCNPT3_08895 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D PCNPT3_r13115 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13123 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13119 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13131 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13129 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13133 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13125 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13127 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13117 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13113 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13121 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13153 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13139 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13151 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13141 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13147 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13143 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13145 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13149 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13137 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13167 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13173 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13163 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13171 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13161 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13155 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13159 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13157 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13165 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13169 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:psy03009]
D PCNPT3_02925 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PCNPT3_08050 hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PCNPT3_01655 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PCNPT3_02930 era; GTPase Era K03595 era; GTPase
D PCNPT3_02255 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D PCNPT3_10800 RNA polymerase-binding dnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PCNPT3_05935 dnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor
D PCNPT3_09115 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D PCNPT3_04440 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D PCNPT3_12025 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D PCNPT3_01015 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D PCNPT3_03860 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PCNPT3_00695 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PCNPT3_10660 rRNA (guanine-N(2)-)-methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PCNPT3_02790 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PCNPT3_03825 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PCNPT3_05130 yebU; rRNA (cytosine-C(5)-)-methyltransferase RsmF K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D PCNPT3_00220 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PCNPT3_03455 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PCNPT3_03655 uroporphyrin-III C/tetrapyrrole methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PCNPT3_10935 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D PCNPT3_01975 rRNA (guanine-N(1)-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D PCNPT3_11850 23S rRNA (guanosine-2'-O-)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PCNPT3_09145 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D PCNPT3_10780 23S rRNA mA1618 methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D PCNPT3_07435 rRNA (guanine-N(2)-)-methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D PCNPT3_03440 rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PCNPT3_01955 S-adenosylmethionine-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PCNPT3_11630 DNA (exogenous) processing protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D PCNPT3_07370 rlmL; 23S rRNA m(2)G2445 methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D PCNPT3_07495 23S rRNA C2498 ribose 2'-O-ribose methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D PCNPT3_03590 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PCNPT3_02270 RNA methyltransferase, TrmA family protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PCNPT3_09935 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PCNPT3_04220 pseudouridine synthase Rlu family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PCNPT3_03955 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PCNPT3_05250 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D PCNPT3_02125 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PCNPT3_03220 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D PCNPT3_06730 RNA pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D PCNPT3_08105 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D PCNPT3_01785 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PCNPT3_01470 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D PCNPT3_01860 methyltransferase of 50S ribosomal subunit protein L11 K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PCNPT3_08985 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D PCNPT3_09860 cupin 4 family protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D PCNPT3_05245 Rne/Rng family ribonuclease protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D PCNPT3_03380 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PCNPT3_03810 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PCNPT3_08215 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D PCNPT3_11435 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PCNPT3_01595 ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D PCNPT3_01650 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PCNPT3_03625 GTP-binding protein Der K03977 engA; GTPase
D PCNPT3_07185 rbgA; GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D PCNPT3_02210 HSR1-like GTP-binding protein K03665 hflX; GTPase
D PCNPT3_12365 HSR1-like GTP-binding protein K03665 hflX; GTPase
D PCNPT3_00655 ribosome maturation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PCNPT3_12480 (p)ppGpp synthetase II and guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PCNPT3_09105 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PCNPT3_09120 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D PCNPT3_11265 hypothetical protein K14761 rlbA; ribosome-associated protein
D PCNPT3_03445 iojap family protein K09710 ybeB; ribosome-associated protein
D PCNPT3_09640 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D PCNPT3_09150 hypothetical protein K07574 yhbY; RNA-binding protein
D PCNPT3_03415 hypothetical protein K09889 yjgA; ribosome-associated protein
D PCNPT3_02450 sigma 54 modulation protein/ribosomal protein S30EA K05809 raiA; ribosome-associated inhibitor A
D PCNPT3_08905 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D PCNPT3_04055 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:psy03016]
D PCNPT3_12615 bifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D PCNPT3_04510 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PCNPT3_02370 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PCNPT3_02060 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PCNPT3_03740 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PCNPT3_04880 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PCNPT3_11135 glutaminyl-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PCNPT3_00300 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PCNPT3_11920 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PCNPT3_09445 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PCNPT3_11805 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PCNPT3_06020 asnC; asparaginyl-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PCNPT3_05155 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PCNPT3_05650 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PCNPT3_06545 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PCNPT3_02680 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PCNPT3_03610 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PCNPT3_04365 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PCNPT3_04370 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PCNPT3_08835 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PCNPT3_12675 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PCNPT3_04915 tryptophanyl-tRNA ligase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PCNPT3_01275 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PCNPT3_07230 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PCNPT3_11035 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PCNPT3_02380 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D PCNPT3_05995 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PCNPT3_09100 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PCNPT3_10040 pseudouridylate synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D PCNPT3_04250 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PCNPT3_00655 ribosome maturation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PCNPT3_02200 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PCNPT3_12910 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PCNPT3_00225 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PCNPT3_12090 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PCNPT3_12925 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PCNPT3_07170 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D PCNPT3_01285 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PCNPT3_07270 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D PCNPT3_08040 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PCNPT3_00040 glyQ; glycyl-tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PCNPT3_00035 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PCNPT3_10805 glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PCNPT3_08700 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PCNPT3_00275 DNA-binding protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D PCNPT3_01535 zinc-binding CMP/dCMP deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PCNPT3_11495 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D PCNPT3_01855 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PCNPT3_07335 dihydrouridine synthase, DuS K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D PCNPT3_09630 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PCNPT3_09450 putative methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D PCNPT3_09455 tRNA mo(5)U34 methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D PCNPT3_05120 S-adenosylmethionine-dependentmethyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D PCNPT3_02875 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D PCNPT3_01475 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PCNPT3_01180 tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D PCNPT3_04240 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D PCNPT3_06330 S-adenosylmethionine-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D PCNPT3_02315 RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PCNPT3_01790 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D PCNPT3_09520 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D PCNPT3_09935 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PCNPT3_04220 pseudouridine synthase Rlu family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PCNPT3_09835 tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PCNPT3_06630 PP-loop domain-containing protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D PCNPT3_01665 regulator of information in SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PCNPT3_11980 intracellular sulfur oxidation protein of DsrH family protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D PCNPT3_11985 intraceullular sulfur oxidation protein of DsrE family protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D PCNPT3_11990 intracellular sulfur oxidation protein of DsrE family protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D PCNPT3_08185 sulfur oxidation protein of DsrC family protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D PCNPT3_04260 Iron binding protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D PCNPT3_00400 glycine cleavage T protein (aminomethyl transferase) K06980 ygfZ; tRNA-modifying protein YgfZ
D PCNPT3_05875 bifunctional 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D PCNPT3_05180 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PCNPT3_03240 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PCNPT3_03245 radical SAM protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PCNPT3_09565 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PCNPT3_02180 putative iron-sulfur cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D PCNPT3_12085 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D PCNPT3_05185 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PCNPT3_05110 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PCNPT3_10165 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PCNPT3_01020 ATPase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D PCNPT3_07460 peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PCNPT3_02545 O-sialoglycoprotein endopeptidase Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PCNPT3_02185 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PCNPT3_02965 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D PCNPT3_11845 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PCNPT3_09080 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:psy03012]
D PCNPT3_03570 translation initiation factor SUI1 K03113 EIF1; translation initiation factor 1
D PCNPT3_09110 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PCNPT3_05160 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PCNPT3_11395 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PCNPT3_10240 translation elongation factor Ts K02357 tsf; elongation factor Ts
D PCNPT3_11960 elongation factor Tu K02358 tuf; elongation factor Tu
D PCNPT3_11965 translation elongation factor G K02355 fusA; elongation factor G
D PCNPT3_11330 elongation factor G K02355 fusA; elongation factor G
D PCNPT3_12200 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D PCNPT3_07525 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PCNPT3_10230 ribosome recycling factor K02838 frr; ribosome recycling factor
D PCNPT3_07520 HemK family modification methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PCNPT3_08900 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PCNPT3_09240 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PCNPT3_08190 elongation factor P K02356 efp; elongation factor P
D PCNPT3_02010 translation elongation factor P K02356 efp; elongation factor P
D PCNPT3_02035 lysyl-tRNA synthetase-like protein GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D PCNPT3_02005 lysine 2,3-aminomutase YodO family protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D PCNPT3_08145 hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D PCNPT3_11925 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PCNPT3_09165 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D PCNPT3_03195 hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:psy03110]
D PCNPT3_09245 ATP-dependent Clp protease ATP-binding protein ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D PCNPT3_02135 chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PCNPT3_08680 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PCNPT3_00285 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D PCNPT3_09920 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PCNPT3_08860 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PCNPT3_04270 Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D PCNPT3_05775 chaperone K04046 yegD; hypothetical chaperone protein
D PCNPT3_09965 chaperonin Cpn60, GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PCNPT3_05810 chaperone DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D PCNPT3_08855 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PCNPT3_03880 heat shock protein DnaJ domain-containing protein K05801 djlA; DnaJ like chaperone protein
D PCNPT3_04265 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB
D PCNPT3_00785 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D PCNPT3_08865 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D PCNPT3_00790 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D PCNPT3_09970 co-chaperonin GroES K04078 groES; chaperonin GroES
D PCNPT3_11550 ATP-dependent M41 family peptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PCNPT3_09140 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PCNPT3_00190 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PCNPT3_11460 protein-export protein chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PCNPT3_09670 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D PCNPT3_12285 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D PCNPT3_12280 hydrogenase accessory protein HypB, putative K04652 hypB; hydrogenase nickel incorporation protein HypB
D PCNPT3_00630 torD; chaperone protein TorD K03533 torD; TorA specific chaperone
D PCNPT3_04035 cyclophilin type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PCNPT3_06550 peptidyl-prolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PCNPT3_08665 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PCNPT3_01905 FKBP-type peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D PCNPT3_08850 FKBP-type peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PCNPT3_02070 FKBP-type peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D PCNPT3_11405 FKBP-type peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D PCNPT3_06415 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D PCNPT3_06805 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D PCNPT3_03870 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PCNPT3_01725 thioredoxin K03671 TXN; thioredoxin
D PCNPT3_11465 glutaredoxin K03676 grxC; glutaredoxin 3
D PCNPT3_07165 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D PCNPT3_12885 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PCNPT3_05620 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D PCNPT3_02305 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PCNPT3_00795 Thiol:disulfide interchange protein dsbD 1 precursor (Protein-disulfide reductase 1) (Disulfide reductase 1) K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D PCNPT3_10430 periplasmic protein thiol--disulfide oxidoreductase DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D PCNPT3_00815 hypothetical protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:psy04131]
D PCNPT3_01525 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PCNPT3_07715 arsenical pump-driving ATPase(arsenite-translocating ATPase) K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PCNPT3_07800 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PCNPT3_05280 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PCNPT3_07805 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PCNPT3_05300 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PCNPT3_09725 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PCNPT3_00520 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PCNPT3_09920 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:psy03051]
D PCNPT3_09920 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:psy03032]
D PCNPT3_11115 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PCNPT3_09335 DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PCNPT3_01840 DNA-binding protein HU alpha subunit K05787 hupA; DNA-binding protein HU-alpha
D PCNPT3_08670 DNA-binding protein HU beta subunit K03530 hupB; DNA-binding protein HU-beta
D PCNPT3_04375 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PCNPT3_10400 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PCNPT3_00005 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PCNPT3_12525 replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PCNPT3_02530 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PCNPT3_11640 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PCNPT3_10170 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PCNPT3_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PCNPT3_02685 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PCNPT3_03730 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PCNPT3_04110 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PCNPT3_01765 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_07565 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_11120 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_07900 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_07325 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PCNPT3_01780 putative DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PCNPT3_10175 ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PCNPT3_01755 multifunctional 5'-3' exonuclease/3'-5' polymerase/3'-5' exonuclease K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PCNPT3_06825 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PCNPT3_12690 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PCNPT3_03060 regulatory protein for replication initiation in SeqA family protein K03645 seqA; negative modulator of initiation of replication
D PCNPT3_03990 chromosomal replication initiator DnaA K10763 hda; DnaA-homolog protein
D PCNPT3_03330 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PCNPT3_00020 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PCNPT3_03005 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PCNPT3_01520 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PCNPT3_05990 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PCNPT3_07195 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:psy03036]
D PCNPT3_09335 DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PCNPT3_02925 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PCNPT3_07800 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PCNPT3_01840 DNA-binding protein HU alpha subunit K05787 hupA; DNA-binding protein HU-alpha
D PCNPT3_08670 DNA-binding protein HU beta subunit K03530 hupB; DNA-binding protein HU-beta
D PCNPT3_04375 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PCNPT3_10400 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PCNPT3_00005 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PCNPT3_03640 DnaA initiator-associating factor for replication initiation K12961 diaA; DnaA initiator-associating protein
D PCNPT3_01850 factor-for-inversion stimulation protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PCNPT3_02205 RNA chaperone Hfq K03666 hfq; host factor-I protein
D PCNPT3_11660 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PCNPT3_07240 37kDa nucleoid-associated protein K06899 ndpA; nucleoid-associated protein
D PCNPT3_03515 cell division ATP-binding protein FtsA K03590 ftsA; cell division protein FtsA
D PCNPT3_10055 septum formation initiator K05589 ftsB; cell division protein FtsB
D PCNPT3_02800 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PCNPT3_03465 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PCNPT3_05630 DNA segregation ATPase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PCNPT3_03460 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D PCNPT3_00295 cell division protein FtsN K03591 ftsN; cell division protein FtsN
D PCNPT3_03510 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D PCNPT3_03490 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PCNPT3_02805 cell division ABC transporter component permease FtsX K09811 ftsX; cell division transport system permease protein
D PCNPT3_03520 cell division GTP-binding tubulin-like protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PCNPT3_06830 cell division protein ZipA K03528 zipA; cell division protein ZipA
D PCNPT3_10735 hypothetical protein K09888 zapA; cell division protein ZapA
D PCNPT3_02340 hypothetical protein K09892 zapB; cell division protein ZapB
D PCNPT3_07440 hypothetical protein K18657 zapC; cell division protein ZapC
D PCNPT3_03560 hypothetical protein K18778 zapD; cell division protein ZapD
D PCNPT3_09720 AFG1 family ATPase K06916 zapE; cell division protein ZapE
D PCNPT3_02190 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PCNPT3_01425 secretion protein HlyD-like protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PCNPT3_04020 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D PCNPT3_04025 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D PCNPT3_04030 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D PCNPT3_05660 hypothetical protein K13053 sulA; cell division inhibitor SulA
D PCNPT3_00380 slmA; division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator
D PCNPT3_03060 regulatory protein for replication initiation in SeqA family protein K03645 seqA; negative modulator of initiation of replication
D PCNPT3_03360 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PCNPT3_03365 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D PCNPT3_03370 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D PCNPT3_03430 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D PCNPT3_10480 CobQ/CobB/MinD/ParA family protein K03496 parA; chromosome partitioning protein
D PCNPT3_00215 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D PCNPT3_00210 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PCNPT3_03005 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PCNPT3_01520 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PCNPT3_00225 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PCNPT3_00220 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PCNPT3_00315 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PCNPT3_01995 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PCNPT3_04885 putative ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PCNPT3_12440 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:psy03400]
D PCNPT3_07625 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PCNPT3_03805 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PCNPT3_11040 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PCNPT3_09300 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PCNPT3_03545 mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PCNPT3_08535 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PCNPT3_00375 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PCNPT3_05565 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PCNPT3_00350 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PCNPT3_04225 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PCNPT3_12475 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PCNPT3_02310 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PCNPT3_06825 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PCNPT3_01755 multifunctional 5'-3' exonuclease/3'-5' polymerase/3'-5' exonuclease K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PCNPT3_11240 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PCNPT3_04045 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PCNPT3_03760 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PCNPT3_00305 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PCNPT3_09310 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PCNPT3_12000 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PCNPT3_11995 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PCNPT3_01155 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PCNPT3_00760 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PCNPT3_06755 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PCNPT3_11615 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PCNPT3_02195 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PCNPT3_11235 DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D PCNPT3_07095 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D PCNPT3_10125 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PCNPT3_08070 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PCNPT3_10170 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PCNPT3_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PCNPT3_02685 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PCNPT3_03730 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PCNPT3_04110 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PCNPT3_01765 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_07565 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_11120 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_07900 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PCNPT3_07325 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PCNPT3_01780 putative DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PCNPT3_11640 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PCNPT3_12690 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PCNPT3_08710 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PCNPT3_08715 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PCNPT3_08705 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PCNPT3_11605 recombination protein RecA K03553 recA; recombination protein RecA
D PCNPT3_09415 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PCNPT3_09410 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PCNPT3_09425 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PCNPT3_11015 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PCNPT3_11865 single-strand binding protein/primosomal replication protein n K02686 priB; primosomal replication protein N
D PCNPT3_06530 primosomal replication protein N'' K04067 priC; primosomal replication protein N''
D PCNPT3_08925 nuclease subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D PCNPT3_08930 exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D PCNPT3_05780 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PCNPT3_00015 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PCNPT3_01225 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PCNPT3_02935 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PCNPT3_07315 recombination protein RecR K06187 recR; recombination protein RecR
D PCNPT3_08875 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PCNPT3_05705 rdgC; recombination associated protein K03554 rdgC; recombination associated protein RdgC
D PCNPT3_06900 type III restriction enzyme, res subunit K19789 radD; DNA repair protein RadD
D PCNPT3_03330 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PCNPT3_00020 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PCNPT3_05990 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PCNPT3_01840 DNA-binding protein HU alpha subunit K05787 hupA; DNA-binding protein HU-alpha
D PCNPT3_08670 DNA-binding protein HU beta subunit K03530 hupB; DNA-binding protein HU-beta
D PCNPT3_01850 factor-for-inversion stimulation protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PCNPT3_04375 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PCNPT3_10400 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PCNPT3_12495 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PCNPT3_11815 23S rRNA Gm2251-methyltransferase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PCNPT3_04335 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PCNPT3_00955 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D PCNPT3_06855 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D PCNPT3_05785 transcriptional regulator for RecA K03565 recX; regulatory protein
D PCNPT3_01435 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D PCNPT3_02505 UvrD/REP helicase K03658 helD; DNA helicase IV [EC:5.6.2.4]
D PCNPT3_06520 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PCNPT3_07465 ATP-dependent helicase, DinG family protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PCNPT3_03300 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PCNPT3_12355 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PCNPT3_03295 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PCNPT3_12360 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:psy03029]
D PCNPT3_09690 bifunctional ubiquinol-cytochrome c reductase/cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PCNPT3_09110 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PCNPT3_05160 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PCNPT3_10240 translation elongation factor Ts K02357 tsf; elongation factor Ts
D PCNPT3_11960 elongation factor Tu K02358 tuf; elongation factor Tu
D PCNPT3_11965 translation elongation factor G K02355 fusA; elongation factor G
D PCNPT3_11330 elongation factor G K02355 fusA; elongation factor G
D PCNPT3_02930 era; GTPase Era K03595 era; GTPase
D PCNPT3_08835 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PCNPT3_03740 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PCNPT3_09445 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PCNPT3_00300 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PCNPT3_11640 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PCNPT3_10205 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D PCNPT3_08860 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PCNPT3_08865 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D PCNPT3_09965 chaperonin Cpn60, GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PCNPT3_09970 co-chaperonin GroES K04078 groES; chaperonin GroES
D PCNPT3_05810 chaperone DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D PCNPT3_08855 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PCNPT3_04250 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PCNPT3_04265 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB
D PCNPT3_07165 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D PCNPT3_09230 BolA family protein K22066 BOLA1; BolA-like protein 1
D PCNPT3_04885 putative ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PCNPT3_12915 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PCNPT3_09920 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:psy02000]
D PCNPT3_04165 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PCNPT3_09485 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PCNPT3_04460 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PCNPT3_12045 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D PCNPT3_07360 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D PCNPT3_06450 molybdenum ABC transporter periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PCNPT3_06445 molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein
D PCNPT3_06440 molybdate ABC transporter ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PCNPT3_09900 Fe3+ ABC transporter periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein
D PCNPT3_10270 ABC iron(III) transporter periplasmic binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PCNPT3_09890 ABC transporter binding protein inner membrane protein K02011 afuB; iron(III) transport system permease protein
D PCNPT3_10265 iron(III) ABC transporter inner membrane binding component K02011 afuB; iron(III) transport system permease protein
D PCNPT3_09895 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PCNPT3_10260 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PCNPT3_06050 tbpA; thiamine transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D PCNPT3_06055 thiP; thiamine transporter membrane protein K02063 thiP; thiamine transport system permease protein
D PCNPT3_06060 thiamin ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PCNPT3_05605 hydroxymethylpyrimidine ABC transporter substrate-binding component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D PCNPT3_05600 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D PCNPT3_05595 ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D PCNPT3_08225 sugar ABC transporter extracellular solute-binding family 1 protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PCNPT3_11090 methyl-galactoside ABC transporter galactose-binding periplasmic protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D PCNPT3_11080 galactoside ABC transporter, permease protein K10541 mglC; methyl-galactoside transport system permease protein
D PCNPT3_11085 galactose/methyl galaxtoside transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D PCNPT3_05755 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D PCNPT3_05750 rbsC; ribose ABC transporter permease protein K10440 rbsC; ribose transport system permease protein
D PCNPT3_05745 D-ribose transporter ATP binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PCNPT3_00490 glycerol-3-phosphate ABC transporter extracellular solute-binding family 1 protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PCNPT3_00485 sn-glycerol-3-phosphate transport system, binding protein inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PCNPT3_00480 sn-glycerol-3-phosphate ABC transporter binding protein inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PCNPT3_00475 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PCNPT3_06080 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D PCNPT3_09755 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PCNPT3_09760 ABC-type transporter inner membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PCNPT3_09765 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PCNPT3_09750 ABC-type transporter periplasmic protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PCNPT3_09745 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D PCNPT3_00270 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PCNPT3_00240 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D PCNPT3_00245 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D PCNPT3_00250 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PCNPT3_02465 arginine ABC transporter solute-binding protein K09997 artI; arginine transport system substrate-binding protein
D PCNPT3_09035 ABC amino acid transporter extracellular solute-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D PCNPT3_09040 polar amino acid ABC transporter inner membrane protein K09970 aapQ; general L-amino acid transport system permease protein
D PCNPT3_09045 polar amino acid ABC transporter inner membrane protein K09971 aapM; general L-amino acid transport system permease protein
D PCNPT3_09050 ABC transporter for amino acids ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PCNPT3_09070 ABC amino acid transporter extracellular solute-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D PCNPT3_09060 polar amino acid ABC transporter inner membrane protein K10023 aotM; arginine/ornithine transport system permease protein
D PCNPT3_09065 polar amino acid ABC transporter inner membrane protein K10024 aotQ; arginine/ornithine transport system permease protein
D PCNPT3_09075 ABC transporter for amino acids ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D PCNPT3_07490 metQ; DL-methionine transporter substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein
D PCNPT3_08580 ABC transporter substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PCNPT3_07485 ABC-type metal ion transport system,permease component K02072 metI; D-methionine transport system permease protein
D PCNPT3_07480 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D PCNPT3_12520 family 3 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PCNPT3_04285 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PCNPT3_04290 oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PCNPT3_04295 oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PCNPT3_04300 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D PCNPT3_04305 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D PCNPT3_06605 peptide ABC transporter extracellular solute-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PCNPT3_06610 peptide ABC transporter protein inner membrane binding component K19227 sapB; cationic peptide transport system permease protein
D PCNPT3_06615 peptide ABC transporter protein inner membrane binding component SapC K19228 sapC; cationic peptide transport system permease protein
D PCNPT3_06620 ABC oligopeptide/dipeptide transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D PCNPT3_06625 ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D PCNPT3_08090 family 5 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PCNPT3_07285 dipeptide-binding protein DppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PCNPT3_07290 peptide ABC transporter protein inner membrane binding component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PCNPT3_07295 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PCNPT3_07280 peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PCNPT3_07255 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PCNPT3_07875 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PCNPT3_08515 putative iron compound-binding protein of ABC transporter family K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PCNPT3_08505 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D PCNPT3_08510 hypothetical protein K02015 ABC.FEV.P; iron complex transport system permease protein
D PCNPT3_07260 iron ABC transporter K02015 ABC.FEV.P; iron complex transport system permease protein
D PCNPT3_07880 ABC transporter K02015 ABC.FEV.P; iron complex transport system permease protein
D PCNPT3_07265 Fe-ABC transporter ATP-binding subunit K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PCNPT3_07885 iron/siderophore ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PCNPT3_01630 Fe ABC transporter K25034 btuF; cobalamin transport system substrate-binding protein
D PCNPT3_01625 iron(III) dicitrate transport system permease FecD K25027 btuC; cobalamin transport system permease protein
D PCNPT3_01620 ABC transporter for cobalamin/Fe3+-siderophores ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D PCNPT3_06280 Iron transport protein, periplasmic-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D PCNPT3_06290 iron-compound ABC transporter ATP-binding protein K11605 sitC; manganese/iron transport system permease protein
D PCNPT3_06295 iron (chelated) ABC transporter permease K11606 sitD; manganese/iron transport system permease protein
D PCNPT3_06285 iron-compound ABC transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D PCNPT3_05415 polysialic acid transport protein KpsM K09688 kpsM; capsular polysaccharide transport system permease protein
D PCNPT3_05425 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PCNPT3_05420 polysialic acid transport ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D PCNPT3_02695 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein
D PCNPT3_02700 lipopolysaccharide ABC transporter permease K11720 lptG; lipopolysaccharide export system permease protein
D PCNPT3_09785 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PCNPT3_06735 lipoprotein releasing system, transmembrane protein, LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PCNPT3_06745 lipoprotein releasing system, transmembrane protein, LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PCNPT3_06740 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PCNPT3_10445 Heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D PCNPT3_10450 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D PCNPT3_10455 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D PCNPT3_10460 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PCNPT3_02805 cell division ABC transporter component permease FtsX K09811 ftsX; cell division transport system permease protein
D PCNPT3_02800 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PCNPT3_08640 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D PCNPT3_10755 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D PCNPT3_10885 inner membrane transport permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PCNPT3_10760 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D PCNPT3_08645 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PCNPT3_10890 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PCNPT3_12140 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PCNPT3_12145 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PCNPT3_12110 ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PCNPT3_12135 ABC transporter-like protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PCNPT3_02760 sufC; cysteine desulfurase ATPase component K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PCNPT3_05915 transporter, NadC family protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PCNPT3_06850 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D PCNPT3_06600 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D PCNPT3_03710 vmrA; multidrug efflux pump VmrA K26937 dinF; MATE family, multidrug efflux pump
D PCNPT3_04850 resistance protein, yhjX K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D PCNPT3_09985 major facilitator superfamily transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D PCNPT3_06065 uhpT; sugar phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D PCNPT3_04940 regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D PCNPT3_00515 regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D PCNPT3_08045 major facilitator superfamily transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PCNPT3_09615 Bcr/CflA family protein drug resistance transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PCNPT3_01715 major facilitator superfamily permease K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PCNPT3_11595 emrD; multidrug resistance protein D K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D PCNPT3_05770 bicyclomycin resistance protein K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D PCNPT3_06575 multidrug transport protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PCNPT3_05375 major facilitator family protein K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D PCNPT3_12345 MFS transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D PCNPT3_07115 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PCNPT3_07110 phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PCNPT3_01200 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D PCNPT3_07120 PTS system glucose-specific transporter K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PCNPT3_08220 PTS glucose-specific subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PCNPT3_11145 PTS system N-acetylglucosamine-specific transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PCNPT3_07835 murP; PTS system N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D PCNPT3_01210 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PCNPT3_00985 phosphotransferase system fructose-specific component IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D PCNPT3_00990 PTS system, fructose-specific IIABC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D PCNPT3_10320 PTS system, N-acetylgalactosamine-specific IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D PCNPT3_11890 N-acetyl-galactosamine K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D PCNPT3_10335 PTS system N-acetylgalactosamine-specific transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D PCNPT3_11910 PTS system N-acetylgalactosamine-specific transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D PCNPT3_10330 PTS system N-acetylgalactosamine-specific transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D PCNPT3_11905 PTS system N-acetylgalactosamine-specific transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D PCNPT3_10325 PTS system, N-acetylgalactosamine-specific IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D PCNPT3_11895 PTS system N-acetylgalactosamine-specific transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
D PCNPT3_00980 PTS system, IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PCNPT3_09795 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PCNPT3_03750 aquaporin Z K06188 aqpZ; aquaporin Z
D PCNPT3_01640 Ion transport 2 domain-containing protein K10716 kch; voltage-gated potassium channel
D PCNPT3_10620 Rh family protein/ammonium transporter K03320 amt; ammonium transporter, Amt family
D PCNPT3_08130 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PCNPT3_04925 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PCNPT3_09680 stringent starvation protein A K03599 sspA; stringent starvation protein A
D PCNPT3_07030 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D PCNPT3_07035 transporter K07114 yfbK; Ca-activated chloride channel homolog
D PCNPT3_09020 von Willebrand factor type A domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PCNPT3_09025 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D PCNPT3_06640 hypothetical protein K19416 yccA; modulator of FtsH protease
D PCNPT3_06355 formate/nitrite transporter K06212 focA; formate transporter
D PCNPT3_00750 nitrite transporter NirC K02598 nirC; nitrite transporter
D PCNPT3_00385 small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D PCNPT3_02260 small-conductance mechanosensitive channel K16052 ynaI; MscS family membrane protein
D PCNPT3_09805 magnesium transporter K06213 mgtE; magnesium transporter
D PCNPT3_10490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D PCNPT3_08065 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D PCNPT3_10485 OmpA family protein K02557 motB; chemotaxis protein MotB
D PCNPT3_08060 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PCNPT3_11940 sodium-type polar flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D PCNPT3_07175 sodium-type flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D PCNPT3_12060 motA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D PCNPT3_12065 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D PCNPT3_01615 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D PCNPT3_01610 biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D PCNPT3_12070 TonB system transport protein ExbD2 K03559 exbD; biopolymer transport protein ExbD
D PCNPT3_09375 MotA/TolQ/ExbB proton channel K03562 tolQ; biopolymer transport protein TolQ
D PCNPT3_09370 biopolymer transport protein ExbD/TolR K03560 tolR; biopolymer transport protein TolR
D PCNPT3_05645 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D PCNPT3_11780 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PCNPT3_01265 outer membrane protein OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PCNPT3_07060 outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PCNPT3_11955 outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PCNPT3_01010 OmpA/MotB domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PCNPT3_05325 outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PCNPT3_04475 OmpA/MotB domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PCNPT3_09490 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D PCNPT3_10985 outer membrane protein ompK K05517 tsx; nucleoside-specific channel-forming protein
D PCNPT3_01635 TonB-dependent receptor, plug K16092 btuB; vitamin B12 transporter
D PCNPT3_01500 type I secretion outer membrane protein, TolC family protein K12340 tolC; outer membrane protein
D PCNPT3_04470 TolC family type I secretion outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D PCNPT3_01325 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D PCNPT3_10205 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D PCNPT3_03620 Pyrrolo-quinoline quinone K17713 bamB; outer membrane protein assembly factor BamB
D PCNPT3_06310 NlpB/DapX family lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D PCNPT3_02120 putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D PCNPT3_07535 Outer membrane lipoprotein OmlA K06186 bamE; outer membrane protein assembly factor BamE
D PCNPT3_06390 surface antigen (D15) K07278 tamA; translocation and assembly module TamA
D PCNPT3_06385 hypothetical protein K09800 tamB; translocation and assembly module TamB
D PCNPT3_12185 putative outer membrane protein K22110 kdgM; oligogalacturonate-specific porin family protein
D PCNPT3_11950 hypothetical protein K22110 kdgM; oligogalacturonate-specific porin family protein
D PCNPT3_09780 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D PCNPT3_09775 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D PCNPT3_03875 organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D PCNPT3_03735 rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein
D PCNPT3_09645 Mg2+/Co2+ transporter K06189 corC; hemolysin (HlyC) family protein
D PCNPT3_03965 LrgA family protein K06518 cidA; holin-like protein
D PCNPT3_08635 amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease
D PCNPT3_02325 iron and zinc efflux system protein K13283 fieF; ferrous-iron efflux pump FieF
D PCNPT3_09495 CzcA family heavy metal efflux pump K07787 cusA; copper/silver efflux system protein
D PCNPT3_01420 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D PCNPT3_09420 transporter DMT superfamily protein K05786 rarD; chloramphenicol-sensitive protein RarD
D PCNPT3_04770 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D PCNPT3_03155 Na+/H+ antiporter NhaC K07084 yuiF; putative amino acid transporter
D PCNPT3_10900 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D PCNPT3_08520 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D PCNPT3_00755 Na+/Ca+ antiporter, CaCA family protein K07301 yrbG; cation:H+ antiporter
D PCNPT3_10685 hypothetical protein K14392 panF; sodium/pantothenate symporter
D PCNPT3_01230 sodium/proline symporter K11928 putP; sodium/proline symporter
D PCNPT3_01930 symporter PutP K11928 putP; sodium/proline symporter
D PCNPT3_11225 serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D PCNPT3_12165 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D PCNPT3_12420 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D PCNPT3_09605 Na+/H+ antiporter NhaC K18218 tet35; tetracycline resistance efflux pump
D PCNPT3_03715 sodium/hydrogen exchanger K03316 nhaP; Na+:H+ antiporter
D PCNPT3_05505 NAD(P)H dehydrogenase (quinone) K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D PCNPT3_10155 sodium/hydrogen exchanger K03455 KEA1_2_3; K+:H+ antiporter
D PCNPT3_03355 potassium uptake integral membrane protein KtrB K03498 trkH; trk/ktr system potassium uptake protein
D PCNPT3_00705 potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D PCNPT3_12510 potassium uptake protein, TrkH family protein K03498 trkH; trk/ktr system potassium uptake protein
D PCNPT3_03350 potassium uptake protein KtrA K03499 trkA; trk/ktr system potassium uptake protein
D PCNPT3_00700 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein
D PCNPT3_08735 uracil-xanthine permease K02824 uraA; uracil permease
D PCNPT3_09595 xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D PCNPT3_02160 tyrosine transporter K03834 tyrP; tyrosine-specific transport protein
D PCNPT3_04575 aromatic amino acid transporter K03835 mtr; tryptophan-specific transport protein
D PCNPT3_09090 serine transporter family protein K03837 sdaC; serine transporter
D PCNPT3_05410 transport system permease protein K26604 cyuP; cysteine uptake transport protein
D PCNPT3_07820 transport system permease protein K26604 cyuP; cysteine uptake transport protein
D PCNPT3_03015 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D PCNPT3_03395 sulfate anion transporter K03321 TC.SULP; sulfate permease, SulP family
D PCNPT3_04200 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D PCNPT3_00550 C4-dicarboxylate transporter, small permease component K21394 yiaM; TRAP-type transport system small permease protein
D PCNPT3_01880 TRAP-type C4-dicarboxylate transport system, periplasmic component K21395 yiaO; TRAP-type transport system periplasmic protein
D PCNPT3_07715 arsenical pump-driving ATPase(arsenite-translocating ATPase) K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PCNPT3_07705 heavy metal membrane efflux protein K03325 ACR3; arsenite transporter
D PCNPT3_02495 dcuC; C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D PCNPT3_02050 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D PCNPT3_06090 arginine exporter protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D PCNPT3_04140 lysine exporter protein LysE/YggA K05834 rhtB; homoserine/homoserine lactone efflux protein
D PCNPT3_04600 lysine exporter protein LysE/YggA K05834 rhtB; homoserine/homoserine lactone efflux protein
D PCNPT3_12375 RhtB protein K05835 rhtC; threonine efflux protein
D PCNPT3_11835 lysine exporter protein LysE/YggA K05835 rhtC; threonine efflux protein
D PCNPT3_08600 branched-chain amino acid transport protein AzlC K26605 azlC; branched chain amino acid efflux pump
D PCNPT3_08595 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D PCNPT3_08805 permease K03548 perM; putative permease
D PCNPT3_05795 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D PCNPT3_04345 multiple antibiotic resistance (MarC)-like protein K05595 marC; multiple antibiotic resistance protein
D PCNPT3_08695 multiple antibiotic resistance (MarC)-like protein K05595 marC; multiple antibiotic resistance protein
D PCNPT3_07855 multiple antibiotic resistance (MarC)-like protein K05595 marC; multiple antibiotic resistance protein
D PCNPT3_03490 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PCNPT3_10080 hypothetical protein K07243 FTR; high-affinity iron transporter
D PCNPT3_12160 high-affinity Fe2+/Pb2+ permease K07243 FTR; high-affinity iron transporter
D PCNPT3_12155 Ferrous iron transporter K07230 p19; periplasmic iron binding protein
D PCNPT3_12075 TonB-like protein K03832 tonB; periplasmic protein TonB
D PCNPT3_01605 TonB family protein K03832 tonB; periplasmic protein TonB
D PCNPT3_09355 OmpA domain-containing protein K03640 pal; peptidoglycan-associated lipoprotein
D PCNPT3_09365 TolA family protein K03646 tolA; colicin import membrane protein
D PCNPT3_09360 TolB domain-containing protein K03641 tolB; TolB protein
D PCNPT3_00625 cytochrome c biogenesis protein, transmembrane region K08344 scsB; suppressor for copper-sensitivity B
D PCNPT3_00635 trimethylamine N-oxide reductase I catalytic subunit K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D PCNPT3_00640 cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D PCNPT3_00630 torD; chaperone protein TorD K03533 torD; TorA specific chaperone
D PCNPT3_06570 multidrug resistance protein K03543 emrA; membrane fusion protein, multidrug efflux system
D PCNPT3_09500 RND family efflux transporter MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D PCNPT3_04465 HlyD family type I secretion membrane fusion protein K12542 lapC; membrane fusion protein, adhesin transport system
D PCNPT3_01425 secretion protein HlyD-like protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PCNPT3_01315 putative polysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PCNPT3_01320 uexopolysaccharide biosynthesis-like protein K25590 epsF; protein tyrosine kinase modulator
D PCNPT3_03575 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D PCNPT3_04960 ferrous ion transport protein B K04759 feoB; ferrous iron transport protein B
D PCNPT3_03580 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D PCNPT3_08540 hypothetical protein K05770 TSPO; translocator protein
D PCNPT3_10435 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:psy02044]
D PCNPT3_01500 type I secretion outer membrane protein, TolC family protein K12340 tolC; outer membrane protein
D PCNPT3_04460 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PCNPT3_04465 HlyD family type I secretion membrane fusion protein K12542 lapC; membrane fusion protein, adhesin transport system
D PCNPT3_04470 TolC family type I secretion outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D PCNPT3_12610 general secretion pathway ATPase protein K02450 gspA; general secretion pathway protein A
D PCNPT3_12605 general secretion pathway protein B K02451 gspB; general secretion pathway protein B
D PCNPT3_00890 general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D PCNPT3_00895 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D PCNPT3_00900 general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PCNPT3_00905 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D PCNPT3_00910 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D PCNPT3_00915 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D PCNPT3_00920 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D PCNPT3_00925 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D PCNPT3_00930 general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D PCNPT3_00935 general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D PCNPT3_00940 general secretion pathway M protein K02462 gspM; general secretion pathway protein M
D PCNPT3_00945 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D PCNPT3_01530 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PCNPT3_11175 fimbrial protein pilin: general secretion pathway protein H K02650 pilA; type IV pilus assembly protein PilA
D PCNPT3_11170 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D PCNPT3_11165 type II secretion system protein, type IV pilus biogenesis protein PilC K02653 pilC; type IV pilus assembly protein PilC
D PCNPT3_02105 type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
D PCNPT3_02455 pilus assembly protein K02655 pilE; type IV pilus assembly protein PilE
D PCNPT3_03595 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D PCNPT3_12730 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D PCNPT3_12725 fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D PCNPT3_12720 type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D PCNPT3_12715 type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D PCNPT3_12710 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D PCNPT3_01585 type II secretion system twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D PCNPT3_11130 type II secretion system twitching motility protein K02670 pilU; twitching motility protein PilU
D PCNPT3_02080 type IV pilus assembly protein K02671 pilV; type IV pilus assembly protein PilV
D PCNPT3_02085 prepilin-type cleavage/methylation-like protein K02672 pilW; type IV pilus assembly protein PilW
D PCNPT3_02095 type IV pilin biogenesis protein K02674 pilY1; type IV pilus assembly protein PilY1
D PCNPT3_02100 methylation site containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D PCNPT3_05895 type IV pilus assembly FimV-related transmembrane protein K08086 fimV; pilus assembly protein FimV
D PCNPT3_00870 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PCNPT3_00865 Flp pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D PCNPT3_00855 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D PCNPT3_00850 Flp pilus assembly protein TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PCNPT3_00845 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D PCNPT3_00840 Flp pilus assembly protein TadC K12511 tadC; tight adherence protein C
D PCNPT3_00825 hypothetical protein K12514 tadF; tight adherence protein F
D PCNPT3_00875 Flp/Fap pilin component superfamily protein K02651 flp; pilus assembly protein Flp/PilA
D PCNPT3_01570 hypothetical protein K02221 yggT; YggT family protein
D PCNPT3_01600 competence protein CelA K02237 comEA; competence protein ComEA
D PCNPT3_04160 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D PCNPT3_10530 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PCNPT3_10535 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PCNPT3_10600 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D PCNPT3_10590 polar flagellar assembly protein, FliH K02411 fliH; flagellar assembly protein FliH
D PCNPT3_10585 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PCNPT3_10560 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PCNPT3_10555 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ
D PCNPT3_10550 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PCNPT3_10545 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PCNPT3_10540 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PCNPT3_02305 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PCNPT3_08400 IcmF-like protein K11891 impL; type VI secretion system protein ImpL
D PCNPT3_08425 DotU K11892 impK; type VI secretion system protein ImpK
D PCNPT3_08430 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ
D PCNPT3_08445 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D PCNPT3_08450 type VI secretion protein K11896 impG; type VI secretion system protein ImpG
D PCNPT3_08460 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D PCNPT3_08465 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D PCNPT3_08470 type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D PCNPT3_08390 vgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PCNPT3_08455 hypothetical protein K11905 K11905; type VI secretion system protein
D PCNPT3_08435 hypothetical protein K11906 vasD; type VI secretion system protein VasD
D PCNPT3_08420 ClpV protein K11907 vasG; type VI secretion system protein VasG
D PCNPT3_08405 hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D PCNPT3_08395 hypothetical protein K11911 vasL; type VI secretion system protein VasL
D PCNPT3_08440 type VI secretion system protein ImpI K11894 impI; type VI secretion system protein ImpI
D PCNPT3_08410 hypothetical protein K11909 vasI; type VI secretion system protein VasI
D PCNPT3_03540 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PCNPT3_11460 protein-export protein chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PCNPT3_05195 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D PCNPT3_12030 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PCNPT3_05200 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PCNPT3_09125 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PCNPT3_01130 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PCNPT3_11760 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PCNPT3_02795 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PCNPT3_05190 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PCNPT3_12915 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PCNPT3_02575 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D PCNPT3_02570 twin-arginine translocation protein subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D PCNPT3_02565 Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:psy02042]
D PCNPT3_04705 C4-dicarboxylate transporter/malic acid transport protein K11041 eta; exfoliative toxin A/B
D PCNPT3_11780 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PCNPT3_11390 Thermolabile hemolysin (TL)-(Lecithin-dependent hemolysin) (LDH) K11018 tlh; thermolabile hemolysin
C 02022 Two-component system [BR:psy02022]
D PCNPT3_00265 phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PCNPT3_00260 transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PCNPT3_02320 copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PCNPT3_08820 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PCNPT3_03775 two-component response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D PCNPT3_11255 winged helix family two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D PCNPT3_08235 response regulator GltR K02483 K02483; two-component system, OmpR family, response regulator
D PCNPT3_06510 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D PCNPT3_06515 LuxR family DNA-binding response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D PCNPT3_04945 sensory histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D PCNPT3_04950 UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D PCNPT3_02265 hybrid sensory histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PCNPT3_03755 LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D PCNPT3_04860 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D PCNPT3_06375 cell autolysis regulator LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D PCNPT3_06370 two-component response-regulatory protein YehT K02477 K02477; two-component system, LytTR family, response regulator
D PCNPT3_04855 two component transcriptional regulator K02477 K02477; two-component system, LytTR family, response regulator
D PCNPT3_01240 sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PCNPT3_01235 Fis family nitrogen metabolism transcriptional regulator NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PCNPT3_00505 phosphoglycerate transport regulatory protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D PCNPT3_00500 phosphoglycerate transport system transcriptional regulatory protein PgtA K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D PCNPT3_10500 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PCNPT3_10510 response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PCNPT3_06840 CheY-like chemotaxis protein, response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PCNPT3_10495 chemotaxis-specific protein-glutamate methyltransferase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PCNPT3_09255 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PCNPT3_03110 chemotaxis CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PCNPT3_08940 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PCNPT3_10280 sensory box sensor histidine kinase in two-component regulatory system K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PCNPT3_10275 two-component system flagellar response regulator FlrC K10943 flrC; two-component system, response regulator FlrC
C 02035 Bacterial motility proteins [BR:psy02035]
D PCNPT3_10500 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PCNPT3_10470 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D PCNPT3_10475 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D PCNPT3_11185 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D PCNPT3_03115 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PCNPT3_10495 chemotaxis-specific protein-glutamate methyltransferase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PCNPT3_10510 response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PCNPT3_06840 CheY-like chemotaxis protein, response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PCNPT3_10505 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D PCNPT3_09255 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PCNPT3_03110 chemotaxis CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PCNPT3_08940 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PCNPT3_02235 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_05075 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_01675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_06095 methyl-accepting chemotaxisprotein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_06105 methyl-accepting chemotaxisprotein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03410 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03690 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03695 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03700 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_07870 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_03745 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_08485 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_08590 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_08620 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_12575 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_12845 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_04970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PCNPT3_12095 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D PCNPT3_10670 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D PCNPT3_05320 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D PCNPT3_10590 polar flagellar assembly protein, FliH K02411 fliH; flagellar assembly protein FliH
D PCNPT3_10585 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PCNPT3_10580 flagellar protein K02413 fliJ; flagellar protein FliJ
D PCNPT3_10555 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ
D PCNPT3_10550 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PCNPT3_10545 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PCNPT3_10540 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PCNPT3_10530 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PCNPT3_10535 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PCNPT3_10595 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D PCNPT3_10565 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PCNPT3_10560 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PCNPT3_10600 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D PCNPT3_03150 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D PCNPT3_03105 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PCNPT3_04505 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D PCNPT3_10570 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D PCNPT3_01460 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D PCNPT3_10605 flagellar hook-basal body protein K02408 fliE; flagellar hook-basal body complex protein FliE
D PCNPT3_10575 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D PCNPT3_03120 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D PCNPT3_03125 flagellar biosynthesis; cell-proximal portion of basal-body rod K02388 flgC; flagellar basal-body rod protein FlgC
D PCNPT3_03130 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D PCNPT3_03140 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D PCNPT3_03145 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PCNPT3_03160 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D PCNPT3_03135 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D PCNPT3_03165 flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D PCNPT3_03170 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL
D PCNPT3_03095 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D PCNPT3_03090 hypothetical protein K09860 flgP; outer membrane protein FlgP
D PCNPT3_11940 sodium-type polar flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D PCNPT3_07175 sodium-type flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D PCNPT3_10375 adenylate kinase K02406 fliC; flagellin
D PCNPT3_03175 A-type flagellin K02406 fliC; flagellin
D PCNPT3_10365 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2
D PCNPT3_10290 hypothetical protein K02422 fliS; flagellar secretion chaperone FliS
D PCNPT3_10515 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D PCNPT3_10490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D PCNPT3_08065 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D PCNPT3_10485 OmpA family protein K02557 motB; chemotaxis protein MotB
D PCNPT3_08060 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PCNPT3_10285 FleQ protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PCNPT3_10280 sensory box sensor histidine kinase in two-component regulatory system K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PCNPT3_10275 two-component system flagellar response regulator FlrC K10943 flrC; two-component system, response regulator FlrC
D PCNPT3_03100 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D PCNPT3_10370 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG
D PCNPT3_10525 flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D PCNPT3_10520 CobQ/CobB/MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D PCNPT3_01585 type II secretion system twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D PCNPT3_11130 type II secretion system twitching motility protein K02670 pilU; twitching motility protein PilU
D PCNPT3_11175 fimbrial protein pilin: general secretion pathway protein H K02650 pilA; type IV pilus assembly protein PilA
D PCNPT3_11170 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D PCNPT3_11165 type II secretion system protein, type IV pilus biogenesis protein PilC K02653 pilC; type IV pilus assembly protein PilC
D PCNPT3_01530 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PCNPT3_03595 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D PCNPT3_12710 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D PCNPT3_12715 type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D PCNPT3_12720 type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D PCNPT3_12725 fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D PCNPT3_12730 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D PCNPT3_02080 type IV pilus assembly protein K02671 pilV; type IV pilus assembly protein PilV
D PCNPT3_02085 prepilin-type cleavage/methylation-like protein K02672 pilW; type IV pilus assembly protein PilW
D PCNPT3_02095 type IV pilin biogenesis protein K02674 pilY1; type IV pilus assembly protein PilY1
D PCNPT3_02105 type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
D PCNPT3_02455 pilus assembly protein K02655 pilE; type IV pilus assembly protein PilE
D PCNPT3_00875 Flp/Fap pilin component superfamily protein K02651 flp; pilus assembly protein Flp/PilA
D PCNPT3_00870 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PCNPT3_00865 Flp pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D PCNPT3_00855 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D PCNPT3_00850 Flp pilus assembly protein TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:psy04812]
D PCNPT3_03360 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PCNPT3_03520 cell division GTP-binding tubulin-like protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PCNPT3_03515 cell division ATP-binding protein FtsA K03590 ftsA; cell division protein FtsA
D PCNPT3_04020 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D PCNPT3_04025 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D PCNPT3_04030 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D PCNPT3_10480 CobQ/CobB/MinD/ParA family protein K03496 parA; chromosome partitioning protein
D PCNPT3_00215 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D PCNPT3_00210 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:psy04147]
D PCNPT3_09920 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PCNPT3_07800 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PCNPT3_10100 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PCNPT3_05280 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PCNPT3_11070 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PCNPT3_05300 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PCNPT3_09725 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PCNPT3_00520 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PCNPT3_04035 cyclophilin type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PCNPT3_11360 alkyl hydroperoxide reductase subunit C-like protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PCNPT3_09965 chaperonin Cpn60, GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PCNPT3_08860 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PCNPT3_02595 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PCNPT3_10120 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PCNPT3_11960 elongation factor Tu K02358 tuf; elongation factor Tu
D PCNPT3_07230 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PCNPT3_06815 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PCNPT3_06860 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PCNPT3_09915 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PCNPT3_07330 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PCNPT3_01680 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PCNPT3_08630 N-Dimethylarginine dimethylaminohydrolase K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D PCNPT3_00725 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PCNPT3_05730 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PCNPT3_01250 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PCNPT3_02555 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PCNPT3_03320 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PCNPT3_10775 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PCNPT3_01830 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PCNPT3_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_01445 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PCNPT3_06635 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PCNPT3_07805 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:psy02048]
D PCNPT3_12690 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PCNPT3_09335 DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PCNPT3_08575 RelE K06218 relE; mRNA interferase RelE/StbE
D PCNPT3_03520 cell division GTP-binding tubulin-like protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PCNPT3_03360 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PCNPT3_03005 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PCNPT3_01520 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PCNPT3_04510 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PCNPT3_00405 hypothetical protein K09159 cptB; antitoxin CptB
D PCNPT3_04250 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:psy04090]
C 01504 Antimicrobial resistance genes [BR:psy01504]
D PCNPT3_09605 Na+/H+ antiporter NhaC K18218 tet35; tetracycline resistance efflux pump
D PCNPT3_01775 quinolone resistance determinant QnrC K18555 qnr; fluoroquinolone resistance protein
D PCNPT3_01425 secretion protein HlyD-like protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PCNPT3_01420 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D PCNPT3_04325 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PCNPT3_01500 type I secretion outer membrane protein, TolC family protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:psy00537]
D PCNPT3_03320 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:psy03100]
D PCNPT3_t12985 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PCNPT3_t12953 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PCNPT3_t13097 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PCNPT3_t13061 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PCNPT3_t13089 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PCNPT3_t13091 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PCNPT3_t13093 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PCNPT3_t12961 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PCNPT3_t12991 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PCNPT3_t13105 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PCNPT3_t13017 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PCNPT3_t13027 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PCNPT3_t13023 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PCNPT3_t13019 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PCNPT3_t13025 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PCNPT3_t13021 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PCNPT3_t13075 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PCNPT3_t13081 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PCNPT3_t13077 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PCNPT3_t13083 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PCNPT3_t13079 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PCNPT3_t12969 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PCNPT3_t13033 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PCNPT3_t13041 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PCNPT3_t13035 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PCNPT3_t12937 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PCNPT3_t12941 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PCNPT3_t13067 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PCNPT3_t12939 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PCNPT3_t13087 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PCNPT3_t12943 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PCNPT3_t12955 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PCNPT3_t12947 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PCNPT3_t12967 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PCNPT3_t12949 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PCNPT3_t13107 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PCNPT3_t12993 tRNA-His K14226 tRNA-His; tRNA His
D PCNPT3_t13103 tRNA-His K14226 tRNA-His; tRNA His
D PCNPT3_t12951 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PCNPT3_t13063 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PCNPT3_t13099 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PCNPT3_t12971 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t13005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t13007 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t13047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t12995 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t13031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t13043 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t13037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t12959 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PCNPT3_t13049 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PCNPT3_t13059 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PCNPT3_t13053 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PCNPT3_t13057 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PCNPT3_t13051 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PCNPT3_t13055 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PCNPT3_t12957 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t12983 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13011 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13009 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13013 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13015 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13045 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13029 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13039 tRNA-Met K14230 tRNA-Met; tRNA Met
D PCNPT3_t13069 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PCNPT3_t13073 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PCNPT3_t12989 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PCNPT3_t12997 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PCNPT3_t13101 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PCNPT3_t13065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PCNPT3_t12965 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PCNPT3_t13001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PCNPT3_t12999 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PCNPT3_t12987 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PCNPT3_t13095 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PCNPT3_t12945 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PCNPT3_t13071 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PCNPT3_t13111 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PCNPT3_t13085 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PCNPT3_t12963 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PCNPT3_t13109 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PCNPT3_t13003 tRNA-Val K14237 tRNA-Val; tRNA Val
D PCNPT3_t12973 tRNA-Val K14237 tRNA-Val; tRNA Val
D PCNPT3_t12975 tRNA-Val K14237 tRNA-Val; tRNA Val
D PCNPT3_t12977 tRNA-Val K14237 tRNA-Val; tRNA Val
D PCNPT3_t12981 tRNA-Val K14237 tRNA-Val; tRNA Val
D PCNPT3_t12979 tRNA-Val K14237 tRNA-Val; tRNA Val
D PCNPT3_r13153 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13139 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13151 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13141 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13147 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13143 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13145 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13149 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13137 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PCNPT3_r13167 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13173 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13163 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13171 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13161 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13155 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13159 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13157 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13165 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13169 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PCNPT3_r13115 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13123 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13119 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13131 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13129 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13133 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13125 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13127 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13117 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13113 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PCNPT3_r13121 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PCNPT3_05855 3-beta hydroxysteroid dehydrogenase/isomerase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D PCNPT3_04930 Quinone oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D PCNPT3_02670 NAD/NADP octopine/nopalinedehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D PCNPT3_07190 hypothetical protein K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D PCNPT3_04450 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PCNPT3_12405 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PCNPT3_10840 TMAO/DMSO reductase K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D PCNPT3_08800 bacterioferritin comigratory protein (Bcp) K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PCNPT3_02485 bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D PCNPT3_09700 ferritin-like protein K02217 ftnA; ferritin [EC:1.16.3.2]
D PCNPT3_04000 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PCNPT3_09260 nrdG; anaerobic ribonucleotide reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PCNPT3_05665 radical SAM domain-containing protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PCNPT3_01980 pyruvate formate lyase-activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PCNPT3_00535 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PCNPT3_01220 oxidoreductase FAD-binding subunit K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D PCNPT3_12275 hydrogenase 4 Fe-S subunit K12136 hyfA; hydrogenase-4 component A [EC:1.-.-.-]
D PCNPT3_12270 hydrogenase 4 subunit B K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D PCNPT3_12265 hyfC; hydrogenase 4 membrane subunit K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-]
D PCNPT3_12260 hydrogenase 4 subunit D K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-]
D PCNPT3_12245 hydrogenase-4 subunit I K12144 hyfI; hydrogenase-4 component I [EC:1.-.-.-]
D PCNPT3_08920 putative maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D PCNPT3_09650 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PCNPT3_04560 acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D PCNPT3_05010 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D PCNPT3_09235 arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D PCNPT3_05870 3-oxoacyl-(acyl carrier protein) synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D PCNPT3_01395 group 1 glycosyl transferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D PCNPT3_11820 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D PCNPT3_03190 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D PCNPT3_11220 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PCNPT3_00800 ApbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PCNPT3_09195 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PCNPT3_07750 PEP synthetase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D PCNPT3_12550 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PCNPT3_04895 retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D PCNPT3_09380 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PCNPT3_00090 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PCNPT3_08140 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PCNPT3_03945 phosphotransferase domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D PCNPT3_08995 phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D PCNPT3_09440 metal dependent phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D PCNPT3_09480 alkyl sulfatase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D PCNPT3_04985 hypothetical protein K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D PCNPT3_05275 putative endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D PCNPT3_09160 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PCNPT3_02560 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PCNPT3_04115 deoxyribonuclease of TatD family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PCNPT3_03055 alpha/beta hydrolase fold protein K01175 ybfF; esterase [EC:3.1.-.-]
D PCNPT3_10145 frsA; fermentation/respiration switch protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D PCNPT3_03770 hypothetical protein K03931 ygjK; glucosidase [EC:3.2.1.-]
D PCNPT3_00685 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PCNPT3_07790 hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D PCNPT3_08605 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PCNPT3_05405 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PCNPT3_12580 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D PCNPT3_04050 maf protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D PCNPT3_07015 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PCNPT3_00200 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PCNPT3_09005 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PCNPT3_05865 alpha/beta hydrolase fold protein K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114]
D PCNPT3_07910 Sialic acid-induced transmembrane protein K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D PCNPT3_12810 xylose isomerase domain-containing protein K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D PCNPT3_05860 peptide synthase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]
D PCNPT3_10910 UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D PCNPT3_09285 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D PCNPT3_09280 RnfABCDGE type electron transport complex subunit C K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D PCNPT3_09275 RnfABCDGE type electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D PCNPT3_09225 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D PCNPT3_09220 Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D PCNPT3_12100 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D PCNPT3_09215 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D PCNPT3_09210 NADH:ubiquinone oxidoreductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D PCNPT3_09205 Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D PCNPT3_09200 Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D PCNPT3_08775 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D PCNPT3_12210 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D PCNPT3_03290 ferredoxin K11107 yfaE; ferredoxin
D PCNPT3_09290 RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D PCNPT3_09295 RnfABCDGE type electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D PCNPT3_09270 RnfABCDGE type electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D PCNPT3_12230 Electron transport protein K05796 hydN; electron transport protein HydN
D PCNPT3_00230 flavodoxin/nitric oxide synthase K06205 mioC; MioC protein
D PCNPT3_01990 flavodoxin FldB K03840 fldB; flavodoxin II
D PCNPT3_12250 hydrogenase 4 subunit H K12143 hyfH; hydrogenase-4 component H
D PCNPT3_04255 scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D PCNPT3_06495 nitrate reductase accessory periplasmic protein NapD K02570 napD; periplasmic nitrate reductase NapD
D PCNPT3_06500 ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D PCNPT3_00645 TorE protein K02571 napE; periplasmic nitrate reductase NapE
D PCNPT3_03040 flavodoxin K03839 fldA; flavodoxin I
D PCNPT3_06480 nitrate reductase periplasmic cytochrome c-type protein NapC K02569 napC; cytochrome c-type protein NapC
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PCNPT3_06835 hypothetical protein K06203 cysZ; CysZ protein
D PCNPT3_01580 alanine racemase domain-containing protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PCNPT3_10395 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D PCNPT3_10390 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D PCNPT3_00610 HemY domain-containing protein K02498 hemY; HemY protein
D PCNPT3_02580 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D PCNPT3_02585 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D PCNPT3_02985 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D PCNPT3_06420 lipid carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D PCNPT3_11830 molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PCNPT3_06995 cold-shock DNA-binding domain-containing protein K03704 cspA; cold shock protein
D PCNPT3_09180 cold-shock DNA-binding domain-containing protein K03704 cspA; cold shock protein
D PCNPT3_01815 anti-RNA polymerase sigma 70 factor K07740 rsd; regulator of sigma D
D PCNPT3_12240 formate hydrogenlyase maturation protein HycH K15834 hycH; formate hydrogenlyase maturation protein HycH
D PCNPT3_10625 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D PCNPT3_06335 RNA-binding S1 domain-containing protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D PCNPT3_12485 heat shock protein HslJ K03668 hslJ; heat shock protein HslJ
D PCNPT3_09250 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PCNPT3_08690 trigger factor K03545 tig; trigger factor
D PCNPT3_10835 ferric reductase domain-containing protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D PCNPT3_12290 HupE/UreJ protein K03192 ureJ; urease accessory protein
D PCNPT3_07550 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D PCNPT3_12300 hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D PCNPT3_12305 hydrogenase isoenzymes formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D PCNPT3_12310 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D PCNPT3_12295 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D PCNPT3_02660 Mg chelatase subunit ChlI K07391 comM; magnesium chelatase family protein
D PCNPT3_11430 Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D PCNPT3_09590 exonuclease IX K01146 xni; protein Xni
D PCNPT3_08015 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D PCNPT3_00710 hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D PCNPT3_12490 ATP-dependent endonuclease of the OLD family protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D PCNPT3_09315 SMC domain-containing protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D PCNPT3_03645 hypothetical protein K07460 yraN; putative endonuclease
D PCNPT3_00675 DNA protecting protein DprA K04096 smf; DNA processing protein
D PCNPT3_05640 recombination factor protein RarA K07478 ycaJ; putative ATPase
D PCNPT3_00665 DNA topoisomerase type IA Zn finger domain-containing protein K07479 yrdD; putative DNA topoisomerase
D PCNPT3_06245 ISCps3, transposase orfA K07483 K07483; transposase
D PCNPT3_06240 ISCps3, transposase orfB K07497 K07497; putative transposase
D PCNPT3_05090 transposase K07498 K07498; putative transposase
D PCNPT3_05080 transposase K07498 K07498; putative transposase
D PCNPT3_08275 integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D PCNPT3_07320 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PCNPT3_01770 choline/carnitine/betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D PCNPT3_07865 di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PCNPT3_12590 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PCNPT3_01170 sodium-glucose/galactose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D PCNPT3_07895 SSS sodium solute transporter superfamily protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D PCNPT3_11655 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PCNPT3_02955 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PCNPT3_11030 hypothetical protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PCNPT3_07765 Na(+)-linked D-alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PCNPT3_06300 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PCNPT3_10965 nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D PCNPT3_04890 NupC family protein (permease) K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D PCNPT3_03910 intracellular septation protein A K06190 ispZ; intracellular septation protein
D PCNPT3_11480 peptidase M23B K22719 envC; murein hydrolase activator
C 99993 Cell motility
D PCNPT3_07225 hypothetical protein K07337 K07337; penicillin-binding protein activator
D PCNPT3_09560 Syd family protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D PCNPT3_06585 ProP expression regulator K03607 proQ; ProP effector
D PCNPT3_08795 universal stress protein UspE K14055 uspE; universal stress protein E
D PCNPT3_01255 GTP-binding virulence regulator protein BipA K06207 typA; GTP-binding protein
D PCNPT3_09635 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PCNPT3_01760 nucleotidyltransferase K07182 K07182; CBS domain-containing protein
D PCNPT3_07905 hypothetical protein K07182 K07182; CBS domain-containing protein
D PCNPT3_12595 SH3 type 3 domain-containing protein K07184 ygiM; SH3 domain protein
D PCNPT3_07205 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D PCNPT3_05635 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D PCNPT3_08880 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D PCNPT3_10415 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D PCNPT3_10200 outer membrane chaperone Skp K06142 hlpA; outer membrane protein
D PCNPT3_10025 peptidase M23B K06194 nlpD; lipoprotein NlpD
D PCNPT3_05205 lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D PCNPT3_05480 capsule polysacchride export protein KpsS K07265 kpsS; capsular polysaccharide export protein
D PCNPT3_05475 capsule polysacchride export protein KpsC K07266 kpsC; capsular polysaccharide export protein
D PCNPT3_11855 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D PCNPT3_04040 hypothetical protein K07286 yajG; uncharacterized lipoprotein
D PCNPT3_08975 outer membrane protein assembly protein AsmA K07289 asmA; AsmA protein
D PCNPT3_08200 hypothetical protein K07340 ybbJ; inner membrane protein
D PCNPT3_10750 secretion protein HlyD family protein K01993 ABC-2.TX; HlyD family secretion protein
D PCNPT3_01950 hypothetical protein K11744 tqsA; AI-2 transport protein TqsA
D PCNPT3_10440 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D PCNPT3_10425 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D PCNPT3_03600 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D PCNPT3_00255 transcriptional regulator PhoU K02039 phoU; phosphate transport system protein
D PCNPT3_08055 copper homeostasis protein K06201 cutC; copper homeostasis protein
D PCNPT3_00335 frataxin family protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D PCNPT3_10150 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PCNPT3_06010 colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D PCNPT3_06185 hypothetical protein K03796 bax; Bax protein
D PCNPT3_02400 GNAT family acetyltransferase K02348 elaA; ElaA protein
D PCNPT3_06975 hydrolase K04477 ycdX; putative hydrolase
D PCNPT3_03800 autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor
D PCNPT3_04820 tRNA-binding protein K06878 K06878; tRNA-binding protein
D PCNPT3_06110 hypothetical protein K06878 K06878; tRNA-binding protein
D PCNPT3_03025 HesB protein family K15724 erpA; iron-sulfur cluster insertion protein
D PCNPT3_02750 FeS assembly scaffold SufA K05997 sufA; Fe-S cluster assembly protein SufA
D PCNPT3_02755 cysteine desulfurase activator complex subunit SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PCNPT3_02765 Iron-regulated ABC transporter permease protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D PCNPT3_01270 hypothetical protein K07058 K07058; membrane protein
D PCNPT3_09980 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA
D PCNPT3_02775 cysteine desufuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D PCNPT3_10785 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE
D PCNPT3_06145 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D PCNPT3_09840 lysogenization regulator K07153 hflD; high frequency lysogenization protein
D PCNPT3_01895 SlyX family protein K03745 slyX; SlyX protein
D PCNPT3_00670 hypothetical protein K03747 smg; Smg protein
D PCNPT3_09550 CreA family protein K05805 creA; CreA protein
D PCNPT3_01795 hypothetical protein K02742 sprT; SprT protein
D PCNPT3_06005 sporulation domain-containing protein K03749 dedD; DedD protein
D PCNPT3_12695 DamX-like protein K03112 damX; DamX protein
D PCNPT3_05140 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D PCNPT3_05145 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D PCNPT3_02355 hypothetical protein K08985 K08985; putative lipoprotein
D PCNPT3_03275 SecC motif-containing protein K09858 K09858; SEC-C motif domain protein
D PCNPT3_07430 PhnA protein-like protein K06193 phnA; protein PhnA
C 99997 Function unknown
D PCNPT3_07010 chondroitin sulfate/heparin utilization regulation protein K06871 K06871; uncharacterized protein
D PCNPT3_04980 chondroitin sulfate/heparin utilization regulation protein K06871 K06871; uncharacterized protein
D PCNPT3_11310 DNA-binding protein K06933 K06933; uncharacterized protein
D PCNPT3_02885 metal-dependent phosphohydrolase K06950 K06950; uncharacterized protein
D PCNPT3_02905 sodium/dicarboxylate symporter K06956 K06956; uncharacterized protein
D PCNPT3_04670 glyoxalase K06996 K06996; uncharacterized protein
D PCNPT3_05905 hypothetical protein K07000 K07000; uncharacterized protein
D PCNPT3_01515 hypothetical protein K07000 K07000; uncharacterized protein
D PCNPT3_03180 membrane associated sulfatase K07014 K07014; uncharacterized protein
D PCNPT3_07250 sulfatase K07014 K07014; uncharacterized protein
D PCNPT3_09055 hypothetical protein K07034 K07034; uncharacterized protein
D PCNPT3_11400 hypothetical protein K07070 K07070; uncharacterized protein
D PCNPT3_06985 permease K07089 K07089; uncharacterized protein
D PCNPT3_00615 permease K07089 K07089; uncharacterized protein
D PCNPT3_05970 hypothetical protein K07090 K07090; uncharacterized protein
D PCNPT3_06525 hypothetical protein K07090 K07090; uncharacterized protein
D PCNPT3_00770 hypoxanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D PCNPT3_02290 hypothetical protein K07112 K07112; uncharacterized protein
D PCNPT3_02295 hypothetical protein K07112 K07112; uncharacterized protein
D PCNPT3_03890 hypothetical protein K07112 K07112; uncharacterized protein
D PCNPT3_03650 LppC family lipoprotein K07121 K07121; uncharacterized protein
D PCNPT3_04340 short-chain dehydrogenase K07124 K07124; uncharacterized protein
D PCNPT3_09600 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein
D PCNPT3_02970 Fe-S oxidoreductase K07139 K07139; uncharacterized protein
D PCNPT3_12760 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D PCNPT3_06190 hypothetical protein K07148 K07148; uncharacterized protein
D PCNPT3_12920 hypothetical protein K08998 K08998; uncharacterized protein
D PCNPT3_02535 GatB/Yqey domain-containing protein K09117 K09117; uncharacterized protein
D PCNPT3_01565 hypothetical protein K09131 K09131; uncharacterized protein
D PCNPT3_10635 hypothetical protein K09158 K09158; uncharacterized protein
D PCNPT3_04005 hypothetical protein K09160 K09160; uncharacterized protein
D PCNPT3_05845 hypothetical protein K09749 K09749; uncharacterized protein
D PCNPT3_09185 hypothetical protein K09768 K09768; uncharacterized protein
D PCNPT3_03905 YciI-like protein K09780 K09780; uncharacterized protein
D PCNPT3_01485 hypothetical protein K09790 K09790; uncharacterized protein
D PCNPT3_04175 hypothetical protein K09791 K09791; uncharacterized protein
D PCNPT3_08785 hypothetical protein K09792 K09792; uncharacterized protein
D PCNPT3_03670 hypothetical protein K09797 K09797; uncharacterized protein
D PCNPT3_05560 hypothetical protein K09799 K09799; uncharacterized protein
D PCNPT3_07540 hypothetical protein K09801 K09801; uncharacterized protein
D PCNPT3_08120 hypothetical protein K09802 K09802; uncharacterized protein
D PCNPT3_11060 hypothetical protein K09807 K09807; uncharacterized protein
D PCNPT3_09190 hypothetical protein K05952 K05952; uncharacterized protein
D PCNPT3_11300 hypothetical protein K05952 K05952; uncharacterized protein
D PCNPT3_08720 RNA-binding S1 domain-containing protein K00243 K00243; uncharacterized protein
D PCNPT3_07220 hypothetical protein K09859 K09859; uncharacterized protein
D PCNPT3_01590 hypothetical protein K09861 K09861; uncharacterized protein
D PCNPT3_03565 hypothetical protein K09862 K09862; uncharacterized protein
D PCNPT3_01845 hypothetical protein K09891 K09891; uncharacterized protein
D PCNPT3_12450 hypothetical protein K09894 K09894; uncharacterized protein
D PCNPT3_10730 yecA family protein K09895 K09895; uncharacterized protein
D PCNPT3_12870 hypothetical protein K09896 K09896; uncharacterized protein
D PCNPT3_11370 hypothetical protein K09898 K09898; uncharacterized protein
D PCNPT3_01970 hypothetical protein K09899 K09899; uncharacterized protein
D PCNPT3_04015 hypothetical protein K09902 K09902; uncharacterized protein
D PCNPT3_07245 hypothetical protein K09904 K09904; uncharacterized protein
D PCNPT3_05095 hypothetical protein K09909 K09909; uncharacterized protein
D PCNPT3_09810 hypothetical protein K09910 K09910; uncharacterized protein
D PCNPT3_04995 hypothetical protein K09912 K09912; uncharacterized protein
D PCNPT3_05295 hypothetical protein K09916 K09916; uncharacterized protein
D PCNPT3_05150 hypothetical protein K09918 K09918; uncharacterized protein
D PCNPT3_12800 hypothetical protein K09923 K09923; uncharacterized protein
D PCNPT3_12840 hypothetical protein K09923 K09923; uncharacterized protein
D PCNPT3_08770 hypothetical protein K09926 K09926; uncharacterized protein
D PCNPT3_04155 hypothetical protein K09928 K09928; uncharacterized protein
D PCNPT3_03985 hypothetical protein K09938 K09938; uncharacterized protein
D PCNPT3_05265 hypothetical protein K09941 K09941; uncharacterized protein
D PCNPT3_00650 hypothetical protein K09954 K09954; uncharacterized protein
D PCNPT3_12555 hypothetical protein K09980 K09980; uncharacterized protein
D PCNPT3_12585 hypothetical protein K07220 K07220; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 11, 2024