+D GENES KO #

  KEGG Orthology (KO) - Sulfuriferula sp. AH1

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:sulf00010] D CAP31_10300 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] D CAP31_05800 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAP31_10305 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAP31_13970 fructose-bisphosphatase class I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CAP31_09565 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CAP31_03175 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_04690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_00910 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_02810 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CAP31_00925 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CAP31_00920 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CAP31_10985 phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CAP31_11695 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CAP31_09385 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D CAP31_00915 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CAP31_04330 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CAP31_06325 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CAP31_06320 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CAP31_06315 pyruvate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_12995 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_01570 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CAP31_04095 alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D CAP31_04890 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CAP31_09975 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CAP31_10450 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CAP31_07625 hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] C 00020 Citrate cycle (TCA cycle) [PATH:sulf00020] D CAP31_05745 citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CAP31_05550 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CAP31_10790 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CAP31_05750 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CAP31_05755 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CAP31_06315 pyruvate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_12995 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_07565 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CAP31_07570 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CAP31_07890 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CAP31_05735 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CAP31_07900 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CAP31_07895 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CAP31_09410 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CAP31_08030 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D CAP31_08035 oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D CAP31_06325 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CAP31_06320 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] C 00030 Pentose phosphate pathway [PATH:sulf00030] D CAP31_05800 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAP31_10305 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAP31_03400 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CAP31_06265 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D CAP31_03395 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CAP31_02075 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CAP31_09560 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CAP31_00930 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CAP31_07855 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CAP31_01765 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CAP31_04295 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D CAP31_09975 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CAP31_10450 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CAP31_09235 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D CAP31_12260 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CAP31_09565 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CAP31_03175 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_04690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_00910 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_13970 fructose-bisphosphatase class I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:sulf00040] D CAP31_11675 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CAP31_02075 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CAP31_07055 hypothetical protein K22935 XK1; D-ribulokinase [EC:2.7.1.47] C 00051 Fructose and mannose metabolism [PATH:sulf00051] D CAP31_09840 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CAP31_11810 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D CAP31_13025 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D CAP31_10450 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CAP31_11790 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D CAP31_13970 fructose-bisphosphatase class I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CAP31_09565 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CAP31_03175 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_04690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_00910 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_02810 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CAP31_11785 GDP-mannose 4,6 dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135] D CAP31_04240 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:sulf00052] D CAP31_01035 nucleoside-diphosphate sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAP31_06375 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAP31_07435 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAP31_11675 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CAP31_09975 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CAP31_10450 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CAP31_10300 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:sulf00500] D CAP31_11675 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CAP31_11850 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D CAP31_10295 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CAP31_06110 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CAP31_10275 starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] D CAP31_10280 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CAP31_10000 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CAP31_10270 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CAP31_06100 maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D CAP31_10285 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CAP31_06125 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CAP31_06095 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D CAP31_06115 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D CAP31_06120 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D CAP31_09975 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CAP31_10450 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CAP31_10300 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] D CAP31_05800 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAP31_10305 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAP31_09840 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:sulf00520] D CAP31_02690 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CAP31_09840 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CAP31_14350 glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CAP31_02785 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CAP31_14355 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CAP31_13630 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D CAP31_05655 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D CAP31_01970 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D CAP31_01975 mannose-1-phosphate guanylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D CAP31_07380 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CAP31_02180 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CAP31_01060 GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D CAP31_07005 glycosyltransferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D CAP31_06990 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D CAP31_06235 NAD-dependent dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D CAP31_10300 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] D CAP31_09975 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CAP31_10450 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CAP31_11675 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CAP31_01035 nucleoside-diphosphate sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAP31_06375 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAP31_07435 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAP31_04240 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D CAP31_05800 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAP31_10305 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAP31_11810 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D CAP31_13025 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D CAP31_11790 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D CAP31_11785 GDP-mannose 4,6 dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135] D CAP31_00090 aminotransferase DegT K13010 per; perosamine synthetase [EC:2.6.1.102] D CAP31_11850 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D CAP31_11845 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D CAP31_11840 lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D CAP31_01670 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D CAP31_10295 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CAP31_06110 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:sulf00620] D CAP31_04890 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CAP31_06325 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CAP31_06320 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CAP31_06315 pyruvate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_12995 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_01570 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CAP31_04095 alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D CAP31_04290 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CAP31_09385 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D CAP31_00915 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CAP31_13955 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CAP31_14380 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CAP31_14385 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CAP31_02985 acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CAP31_09675 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D CAP31_08060 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CAP31_07070 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CAP31_07905 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D CAP31_08030 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D CAP31_08035 oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D CAP31_09410 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CAP31_04330 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CAP31_04670 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D CAP31_11010 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D CAP31_00225 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:sulf00630] D CAP31_04890 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CAP31_05745 citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CAP31_05550 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CAP31_04940 FAD-binding oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D CAP31_04945 glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D CAP31_04950 glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D CAP31_09940 catalase K03781 katE; catalase [EC:1.11.1.6] D CAP31_10705 catalase HPII K03781 katE; catalase [EC:1.11.1.6] D CAP31_02070 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CAP31_06400 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CAP31_07190 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CAP31_03100 rbcL; ribulose-bisphosphate carboxylase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D CAP31_04720 rbcL; ribulose-bisphosphate carboxylase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D CAP31_03465 ribulose 1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D CAP31_03105 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D CAP31_04715 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D CAP31_01090 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D CAP31_06905 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAP31_05935 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAP31_11550 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CAP31_14270 glycine dehydrogenase (aminomethyl-transferring) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D CAP31_14265 glycine dehydrogenase (aminomethyl-transferring) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D CAP31_14280 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CAP31_06315 pyruvate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_12995 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_09955 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CAP31_14275 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CAP31_01870 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CAP31_01880 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CAP31_07135 formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CAP31_07140 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CAP31_07130 formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D CAP31_07125 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D CAP31_02705 hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9] D CAP31_09785 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CAP31_06880 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:sulf00640] D CAP31_04890 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CAP31_04290 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CAP31_06315 pyruvate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_12995 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_05490 alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D CAP31_13955 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CAP31_14380 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CAP31_14385 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CAP31_02985 acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CAP31_07570 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CAP31_07565 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:sulf00650] D CAP31_07890 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CAP31_05735 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CAP31_07900 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CAP31_07895 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CAP31_06665 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D CAP31_11030 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CAP31_07175 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CAP31_11025 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:sulf00660] D CAP31_11030 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CAP31_07175 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CAP31_11025 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CAP31_07570 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CAP31_07565 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CAP31_02930 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CAP31_02935 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CAP31_02940 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:sulf00562] D CAP31_08740 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CAP31_00935 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CAP31_02810 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:sulf00190] D CAP31_02825 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D CAP31_02830 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D CAP31_02835 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D CAP31_02840 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D CAP31_02845 NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D CAP31_02850 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D CAP31_02855 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D CAP31_02860 NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D CAP31_02870 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D CAP31_02875 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D CAP31_02880 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D CAP31_02885 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D CAP31_02890 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D CAP31_07890 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CAP31_05735 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CAP31_07900 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CAP31_07895 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CAP31_03410 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D CAP31_03415 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D CAP31_03420 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D CAP31_13450 cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D CAP31_10685 cytochrome C subunit protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D CAP31_13445 cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D CAP31_10680 hypothetical protein K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D CAP31_13435 cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D CAP31_11175 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CAP31_11170 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CAP31_11165 cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D CAP31_08905 cytochrome C K08738 CYC; cytochrome c D CAP31_00445 cytochrome C K08738 CYC; cytochrome c D CAP31_14420 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CAP31_09630 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CAP31_14410 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CAP31_09665 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CAP31_14415 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CAP31_09625 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CAP31_14425 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CAP31_14405 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CAP31_09660 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CAP31_14440 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CAP31_09645 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CAP31_14430 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CAP31_09635 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CAP31_14435 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CAP31_09640 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CAP31_13500 plasma-membrane proton-efflux P-type ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1] D CAP31_03285 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D CAP31_10245 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms [PATH:sulf00710] D CAP31_03100 rbcL; ribulose-bisphosphate carboxylase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D CAP31_04720 rbcL; ribulose-bisphosphate carboxylase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D CAP31_03465 ribulose 1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D CAP31_03105 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D CAP31_04715 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D CAP31_00920 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CAP31_00925 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CAP31_09565 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CAP31_03175 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_04690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_00910 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_13970 fructose-bisphosphatase class I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CAP31_09560 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CAP31_00930 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CAP31_01765 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CAP31_11625 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D CAP31_02810 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CAP31_02075 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CAP31_07855 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CAP31_07905 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] C 00720 Carbon fixation pathways in prokaryotes [PATH:sulf00720] D CAP31_04330 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CAP31_08030 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D CAP31_08035 oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D CAP31_09410 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CAP31_07890 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CAP31_05735 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CAP31_07900 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CAP31_07895 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CAP31_07565 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CAP31_07570 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CAP31_10790 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CAP31_05550 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CAP31_13955 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CAP31_14380 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CAP31_14385 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CAP31_02985 acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CAP31_10105 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CAP31_01230 methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CAP31_04290 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CAP31_04890 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:sulf00680] D CAP31_01570 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CAP31_01575 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D CAP31_07135 formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CAP31_07140 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CAP31_07130 formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D CAP31_07125 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D CAP31_11550 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CAP31_01090 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D CAP31_11695 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CAP31_09565 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CAP31_03175 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_04690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_00910 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAP31_13970 fructose-bisphosphatase class I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CAP31_06910 amidophosphoribosyltransferase K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] D CAP31_06915 protein glxC K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21] D CAP31_06920 FMN-binding glutamate synthase family protein K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D CAP31_01850 pyridine nucleotide-disulfide oxidoreductase K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D CAP31_01845 heterodisulfide reductase subunit B K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D CAP31_01865 disulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D CAP31_01840 heterodisulfide reductase subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D CAP31_01860 heterodisulfide reductase subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D CAP31_04290 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CAP31_04890 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CAP31_04330 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CAP31_10985 phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CAP31_09930 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CAP31_07870 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:sulf00910] D CAP31_12725 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CAP31_01355 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CAP31_12690 nitrate transporter K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CAP31_01350 nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein D CAP31_12685 nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein D CAP31_01345 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CAP31_12680 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CAP31_12760 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D CAP31_12745 nitrite reductase large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D CAP31_12740 nitrite reductase (NAD(P)H) small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4] D CAP31_00745 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D CAP31_00750 nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D CAP31_00740 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D CAP31_06905 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAP31_05935 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAP31_14090 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CAP31_01340 cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104] C 00920 Sulfur metabolism [PATH:sulf00920] D CAP31_01515 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CAP31_01510 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D CAP31_01505 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CAP31_04450 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D CAP31_08865 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CAP31_04445 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CAP31_08870 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CAP31_04440 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CAP31_08875 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D CAP31_01810 formate dehydrogenase K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6] D CAP31_01815 ferredoxin K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB D CAP31_01820 DMSO reductase K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC D CAP31_12805 sulfur oxidation c-type cytochrome SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D CAP31_12790 sulfur oxidation c-type cytochrome SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D CAP31_12795 thiosulfate oxidation carrier protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY D CAP31_12800 thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ D CAP31_10670 thiosulfohydrolase SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D CAP31_12810 thiosulfohydrolase SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D CAP31_05840 hypothetical protein K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D CAP31_08880 nitrite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D CAP31_05225 pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D CAP31_04920 Zn-dependent hydrolase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18] D CAP31_01360 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CAP31_08730 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CAP31_13115 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CAP31_00230 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CAP31_00590 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CAP31_03010 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:sulf00061] D CAP31_13955 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CAP31_14380 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CAP31_14385 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CAP31_02985 acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CAP31_04805 acyl carrier protein K02078 acpP; acyl carrier protein D CAP31_07995 acyl carrier protein K02078 acpP; acyl carrier protein D CAP31_08005 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CAP31_08010 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CAP31_04795 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CAP31_07990 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CAP31_04780 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CAP31_06660 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CAP31_08000 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CAP31_04610 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CAP31_08090 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CAP31_12695 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:sulf00071] D CAP31_12695 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAP31_10160 bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-ACP synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D CAP31_00410 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D CAP31_01570 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:sulf00561] D CAP31_08015 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CAP31_04370 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CAP31_01440 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CAP31_12290 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CAP31_00330 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CAP31_01110 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00564 Glycerophospholipid metabolism [PATH:sulf00564] D CAP31_12595 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CAP31_09805 Fe-S oxidoreductase K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D CAP31_04370 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CAP31_01440 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CAP31_12290 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CAP31_00330 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CAP31_10160 bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-ACP synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D CAP31_04580 hypothetical protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CAP31_11015 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CAP31_09945 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D CAP31_02715 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CAP31_04190 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D CAP31_12565 haloacid dehalogenase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D CAP31_04550 cardiolipin synthase B K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D CAP31_06035 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D CAP31_00845 hypothetical protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D CAP31_01895 geranylgeranyl reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:sulf01040] D CAP31_12890 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D CAP31_10895 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:sulf00230] D CAP31_09975 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CAP31_10450 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CAP31_12260 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CAP31_03005 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CAP31_10610 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CAP31_00970 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CAP31_06435 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D CAP31_00275 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CAP31_00980 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D CAP31_00985 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CAP31_00285 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CAP31_10095 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CAP31_10615 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CAP31_03345 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CAP31_03365 haloacid dehalogenase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D CAP31_03535 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D CAP31_08420 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CAP31_08555 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D CAP31_06525 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CAP31_10185 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CAP31_13550 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CAP31_06530 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CAP31_13515 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CAP31_09780 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CAP31_09775 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CAP31_14025 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D CAP31_13505 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CAP31_10935 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CAP31_08495 GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D CAP31_06580 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D CAP31_05760 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CAP31_12315 carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20] D CAP31_10560 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CAP31_04280 serine/threonine protein phosphatase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D CAP31_01435 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D CAP31_04450 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D CAP31_08865 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CAP31_04445 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CAP31_08870 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CAP31_06750 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CAP31_06745 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CAP31_06740 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:sulf00240] D CAP31_02750 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CAP31_02745 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CAP31_13775 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CAP31_01455 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CAP31_13770 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CAP31_06310 dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D CAP31_12360 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CAP31_06565 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CAP31_04565 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CAP31_10185 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CAP31_02460 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CAP31_01285 metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D CAP31_11705 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CAP31_06540 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CAP31_03345 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CAP31_03535 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D CAP31_04975 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CAP31_13780 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CAP31_11430 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CAP31_09780 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CAP31_09775 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CAP31_09545 nucleotide pyrophosphohydrolase K16904 DCTPP1; dCTP diphosphatase [EC:3.6.1.12] D CAP31_07970 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CAP31_01015 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CAP31_07585 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:sulf00250] D CAP31_08510 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CAP31_11085 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D CAP31_03375 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CAP31_01090 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D CAP31_03530 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CAP31_01290 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CAP31_05760 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CAP31_10095 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CAP31_13775 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CAP31_14090 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CAP31_06905 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAP31_05935 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAP31_02750 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CAP31_02745 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CAP31_14350 glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CAP31_03005 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:sulf00260] D CAP31_08745 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CAP31_02945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CAP31_02950 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CAP31_03380 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CAP31_11055 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D CAP31_03385 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CAP31_11550 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CAP31_01090 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D CAP31_10985 phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CAP31_09930 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CAP31_07870 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D CAP31_00055 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D CAP31_14270 glycine dehydrogenase (aminomethyl-transferring) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D CAP31_14265 glycine dehydrogenase (aminomethyl-transferring) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D CAP31_14280 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CAP31_06315 pyruvate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_12995 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_09955 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CAP31_14275 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CAP31_01870 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CAP31_01880 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CAP31_11015 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CAP31_06895 aminomethyltransferase K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D CAP31_06885 sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D CAP31_06900 hypothetical protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D CAP31_06890 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D CAP31_01760 threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CAP31_02980 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CAP31_02975 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:sulf00270] D CAP31_08730 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CAP31_13115 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CAP31_00230 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CAP31_11745 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CAP31_13800 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CAP31_05610 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CAP31_01215 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CAP31_11615 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] D CAP31_08420 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CAP31_10035 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D CAP31_08675 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CAP31_01225 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CAP31_08745 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CAP31_02945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CAP31_02950 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CAP31_03380 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CAP31_00590 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CAP31_03010 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D CAP31_04910 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CAP31_04225 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D CAP31_04230 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D CAP31_08510 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CAP31_01360 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CAP31_07815 cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D CAP31_09930 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:sulf00280] D CAP31_04910 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CAP31_06315 pyruvate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_12995 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:sulf00290] D CAP31_01760 threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CAP31_02930 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CAP31_02935 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CAP31_02940 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CAP31_11030 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CAP31_07175 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CAP31_11025 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CAP31_11020 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CAP31_00435 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CAP31_04910 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CAP31_03375 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CAP31_04670 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D CAP31_11010 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:sulf00300] D CAP31_03380 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CAP31_08745 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CAP31_02945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CAP31_02950 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CAP31_10515 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CAP31_05600 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CAP31_07680 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CAP31_03520 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CAP31_07675 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CAP31_05580 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CAP31_01200 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CAP31_00510 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CAP31_02145 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CAP31_02150 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:sulf00310] D CAP31_05755 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CAP31_06315 pyruvate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_12995 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:sulf00220] D CAP31_03525 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CAP31_03530 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CAP31_01290 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CAP31_06610 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D CAP31_06615 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D CAP31_06750 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CAP31_06745 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CAP31_06740 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D CAP31_06905 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAP31_05935 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAP31_02750 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CAP31_02745 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CAP31_08510 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CAP31_03375 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CAP31_00950 amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D CAP31_12930 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D CAP31_00990 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D CAP31_13640 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D CAP31_03520 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:sulf00330] D CAP31_06650 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D CAP31_11425 lysine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D CAP31_11615 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] D CAP31_00055 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D CAP31_06720 amiE; acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CAP31_02435 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CAP31_11600 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CAP31_02480 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D CAP31_08510 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:sulf00340] D CAP31_07375 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D CAP31_05765 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D CAP31_05285 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D CAP31_05290 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D CAP31_05300 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D CAP31_05305 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D CAP31_05295 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D CAP31_05310 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D CAP31_09920 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CAP31_05315 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CAP31_05320 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D CAP31_00055 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] C 00350 Tyrosine metabolism [PATH:sulf00350] D CAP31_08510 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CAP31_09920 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CAP31_05315 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CAP31_05235 cytochrome D ubiquinol oxidase subunit I K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D CAP31_00055 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D CAP31_01570 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CAP31_00035 fumarylacetoacetate hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:sulf00360] D CAP31_05235 cytochrome D ubiquinol oxidase subunit I K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D CAP31_00055 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D CAP31_08510 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CAP31_09920 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CAP31_05315 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CAP31_00065 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D CAP31_06720 amiE; acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:sulf00380] D CAP31_02705 hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9] D CAP31_05755 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CAP31_06315 pyruvate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_12995 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_05235 cytochrome D ubiquinol oxidase subunit I K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D CAP31_00055 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D CAP31_06720 amiE; acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CAP31_09940 catalase K03781 katE; catalase [EC:1.11.1.6] D CAP31_10705 catalase HPII K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sulf00400] D CAP31_09915 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CAP31_14030 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] D CAP31_14375 type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CAP31_00315 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D CAP31_02375 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CAP31_06535 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CAP31_06335 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CAP31_02065 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CAP31_02060 anthranilate/aminodeoxychorismate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CAP31_02055 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D CAP31_02970 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D CAP31_02050 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D CAP31_02980 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CAP31_02975 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CAP31_09925 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D CAP31_09910 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CAP31_08510 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CAP31_09920 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CAP31_05315 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:sulf00410] D CAP31_10345 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D CAP31_08460 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:sulf00430] D CAP31_05015 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CAP31_04290 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:sulf00440] D CAP31_09260 carbon-phosphorus lyase K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D CAP31_09270 phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D CAP31_09265 phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D CAP31_09245 phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D CAP31_09240 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D CAP31_09255 carbon-phosphorus lyase complex subunit PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D CAP31_09230 phosphonate metabolism protein PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:sulf00450] D CAP31_11745 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CAP31_13800 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CAP31_05610 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CAP31_05195 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CAP31_04450 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D CAP31_08865 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CAP31_04445 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CAP31_08870 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CAP31_09370 selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D CAP31_07115 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D CAP31_05540 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:sulf00460] D CAP31_05015 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CAP31_11550 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:sulf00470] D CAP31_13815 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CAP31_02185 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CAP31_11855 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CAP31_02160 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CAP31_01200 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CAP31_00510 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CAP31_00065 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:sulf00480] D CAP31_05015 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CAP31_04225 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D CAP31_04230 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D CAP31_06330 peptidase M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CAP31_10645 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CAP31_10715 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CAP31_03390 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CAP31_00875 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CAP31_10790 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CAP31_03395 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CAP31_03400 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CAP31_11615 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis D CAP31_07215 glycosyltransferase K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:sulf00540] D CAP31_04615 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CAP31_02205 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CAP31_04605 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CAP31_03020 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D CAP31_04620 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CAP31_10545 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CAP31_13275 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D CAP31_11700 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CAP31_13270 phenylphosphate carboxylase subunit delta K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D CAP31_10555 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CAP31_02240 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CAP31_03665 hypothetical protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CAP31_01205 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CAP31_01210 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CAP31_09595 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D CAP31_01470 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CAP31_06575 D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D CAP31_12295 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D CAP31_06165 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D CAP31_01480 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D CAP31_07820 ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D CAP31_07370 hypothetical protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:sulf00541] D CAP31_11675 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CAP31_01035 nucleoside-diphosphate sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAP31_06375 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAP31_07435 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAP31_10815 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CAP31_10810 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CAP31_11835 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CAP31_10820 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CAP31_10825 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D CAP31_11850 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D CAP31_11845 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D CAP31_11840 lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D CAP31_01670 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D CAP31_11810 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D CAP31_13025 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D CAP31_11790 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D CAP31_11785 GDP-mannose 4,6 dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135] D CAP31_00090 aminotransferase DegT K13010 per; perosamine synthetase [EC:2.6.1.102] D CAP31_14355 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CAP31_11770 NAD-dependent dehydratase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426] D CAP31_01060 GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:sulf00550] D CAP31_07380 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CAP31_02180 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CAP31_02175 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CAP31_02160 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CAP31_02145 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CAP31_02185 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CAP31_02150 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CAP31_04575 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CAP31_02265 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CAP31_01160 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CAP31_02155 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CAP31_02170 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CAP31_00320 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D CAP31_02345 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CAP31_06305 hypothetical protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D CAP31_12405 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CAP31_02140 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CAP31_13490 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CAP31_12420 peptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CAP31_13675 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:sulf00552] D CAP31_02265 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CAP31_01160 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CAP31_01110 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:sulf00543] D CAP31_08730 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CAP31_13115 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CAP31_00230 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:sulf00730] D CAP31_02260 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D CAP31_02300 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D CAP31_08720 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAP31_00105 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAP31_00190 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAP31_08195 glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D CAP31_03980 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CAP31_12845 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D CAP31_02305 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CAP31_04185 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CAP31_03560 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CAP31_10560 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:sulf00740] D CAP31_04170 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CAP31_11560 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CAP31_04175 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CAP31_04165 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CAP31_03495 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CAP31_14150 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D CAP31_13215 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:sulf00750] D CAP31_09930 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CAP31_01955 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D CAP31_04645 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D CAP31_03385 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:sulf00760] D CAP31_11085 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D CAP31_01025 quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D CAP31_09475 nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D CAP31_03345 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CAP31_02475 nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CAP31_07560 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D CAP31_04195 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D CAP31_05365 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:sulf00770] D CAP31_11030 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CAP31_07175 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CAP31_11025 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CAP31_11020 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CAP31_00435 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CAP31_08455 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D CAP31_08460 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CAP31_01010 phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CAP31_13375 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CAP31_01780 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CAP31_02685 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CAP31_04910 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CAP31_10345 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:sulf00780] D CAP31_01715 malonyl-[acyl-carrier protein] O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D CAP31_04795 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CAP31_07990 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CAP31_04780 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CAP31_06660 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CAP31_08000 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CAP31_04610 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CAP31_08090 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CAP31_01710 pimeloyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D CAP31_01705 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CAP31_01750 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CAP31_01720 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CAP31_01700 biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D CAP31_13705 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:sulf00785] D CAP31_12430 octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D CAP31_14285 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CAP31_12435 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CAP31_01885 radical SAM protein K09711 lipS1; lipoyl synthase D CAP31_01900 radical SAM protein K24689 lipS2; lipoyl synthase D CAP31_01890 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CAP31_06315 pyruvate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_12995 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_06325 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CAP31_06320 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CAP31_05750 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CAP31_05755 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CAP31_14270 glycine dehydrogenase (aminomethyl-transferring) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D CAP31_14265 glycine dehydrogenase (aminomethyl-transferring) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D CAP31_14280 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CAP31_09955 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CAP31_14275 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CAP31_01870 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CAP31_01880 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:sulf00790] D CAP31_03975 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D CAP31_10260 dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D CAP31_02505 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CAP31_08445 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CAP31_02780 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CAP31_10165 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CAP31_02990 bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CAP31_04170 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CAP31_07985 aminodeoxychorismate synthase, component I K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123] D CAP31_07980 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D CAP31_02230 pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33] D CAP31_10390 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CAP31_11080 hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CAP31_10385 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CAP31_11535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D CAP31_09085 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CAP31_09530 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CAP31_09080 cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CAP31_12780 cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CAP31_09105 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CAP31_10735 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CAP31_10455 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D CAP31_09095 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CAP31_10725 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CAP31_09110 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] D CAP31_00355 hypothetical protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:sulf00670] D CAP31_10165 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CAP31_10105 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CAP31_11550 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CAP31_00970 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CAP31_10615 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CAP31_07000 formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CAP31_00625 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CAP31_14280 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CAP31_13800 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CAP31_07585 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CAP31_09785 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CAP31_06880 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CAP31_01230 methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CAP31_14100 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:sulf00860] D CAP31_04865 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAP31_10590 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CAP31_02335 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CAP31_01410 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CAP31_01415 uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D CAP31_14095 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CAP31_10600 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D CAP31_08655 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D CAP31_02410 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D CAP31_05355 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D CAP31_01420 hypothetical protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D CAP31_08855 uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D CAP31_12750 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D CAP31_12730 cobalamin biosynthesis protein CbiX K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D CAP31_14145 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D CAP31_14140 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CAP31_14165 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D CAP31_10925 hypothetical protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D CAP31_14155 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D CAP31_14160 threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC D CAP31_14170 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D CAP31_14200 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D CAP31_14205 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D CAP31_05505 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D CAP31_14195 hypothetical protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D CAP31_03145 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D CAP31_09555 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:sulf00130] D CAP31_13470 hypothetical protein K03181 ubiC; chorismate lyase [EC:4.1.3.40] D CAP31_13465 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CAP31_01485 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D CAP31_13215 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CAP31_01995 hypothetical protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D CAP31_05660 bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D CAP31_01990 hypothetical protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D CAP31_11720 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CAP31_13670 demethoxyubiquinone hydroxylase family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D CAP31_09430 NAD(P)H:quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:sulf00900] D CAP31_03980 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CAP31_04585 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CAP31_09520 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CAP31_12270 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CAP31_09515 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CAP31_10205 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CAP31_03475 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CAP31_13215 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CAP31_03985 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D CAP31_11580 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D CAP31_04575 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CAP31_10755 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:sulf00906] D CAP31_08145 squalene synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:sulf00907] D CAP31_04095 alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CAP31_09560 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CAP31_00930 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:sulf00523] D CAP31_10815 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CAP31_10810 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CAP31_11835 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CAP31_10820 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CAP31_10825 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D CAP31_10810 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:sulf00332] D CAP31_11600 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CAP31_02480 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:sulf00261] D CAP31_04450 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D CAP31_08865 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CAP31_04445 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CAP31_08870 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CAP31_08745 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CAP31_02945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CAP31_02950 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CAP31_10515 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CAP31_05600 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:sulf00521] D CAP31_10300 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] D CAP31_09975 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CAP31_10450 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CAP31_08740 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CAP31_00935 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CAP31_10815 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CAP31_10810 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CAP31_11835 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CAP31_10820 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CAP31_10825 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D CAP31_10300 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:sulf00525] D CAP31_10815 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CAP31_10810 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:sulf00401] D CAP31_09910 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CAP31_08510 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CAP31_09920 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CAP31_05315 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D CAP31_02065 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CAP31_02060 anthranilate/aminodeoxychorismate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D CAP31_08005 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CAP31_04780 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CAP31_06660 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CAP31_08000 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CAP31_08090 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CAP31_04805 acyl carrier protein K02078 acpP; acyl carrier protein D CAP31_07995 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:sulf00999] D CAP31_01215 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CAP31_00315 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D CAP31_08695 ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D CAP31_00080 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D CAP31_00215 ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S C 00627 Aminobenzoate degradation [PATH:sulf00627] D CAP31_06720 amiE; acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CAP31_13215 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CAP31_00305 type I glutamate--ammonia ligase K20712 glnA; 3-(hydroxyamino)phenol mutase [EC:5.4.4.3] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:sulf00625] D CAP31_01570 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CAP31_00750 nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D CAP31_00740 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D CAP31_00745 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D CAP31_03185 hypothetical protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D CAP31_07715 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D CAP31_03185 hypothetical protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D CAP31_07715 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:sulf00633] D CAP31_05720 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D CAP31_11960 hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D CAP31_11945 Ni/Fe hydrogenase K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:sulf00643] D CAP31_06720 amiE; acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation [PATH:sulf00791] D CAP31_06615 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D CAP31_06610 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D CAP31_06750 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CAP31_06745 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CAP31_06740 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:sulf00626] D CAP31_01570 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:sulf03020] D CAP31_12185 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CAP31_12180 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CAP31_12020 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CAP31_13510 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:sulf03010] D CAP31_06545 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CAP31_04555 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CAP31_12120 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CAP31_12025 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CAP31_12065 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CAP31_01170 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CAP31_12170 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CAP31_12080 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CAP31_13645 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CAP31_12155 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CAP31_12030 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CAP31_12175 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CAP31_12035 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CAP31_12085 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CAP31_05465 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CAP31_11660 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CAP31_12105 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CAP31_01180 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CAP31_12130 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CAP31_03505 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CAP31_04415 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CAP31_12200 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CAP31_12135 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CAP31_12150 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CAP31_12145 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CAP31_12090 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CAP31_12075 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CAP31_12190 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CAP31_01185 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CAP31_12195 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CAP31_12205 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CAP31_13650 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CAP31_12100 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CAP31_12055 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CAP31_12115 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CAP31_12015 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CAP31_12070 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CAP31_11645 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CAP31_03315 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CAP31_11585 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CAP31_12125 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CAP31_12140 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CAP31_12095 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CAP31_12255 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D CAP31_11590 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CAP31_01000 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CAP31_12110 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CAP31_12060 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CAP31_00340 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CAP31_08020 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CAP31_00995 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CAP31_14495 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CAP31_03310 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CAP31_12040 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CAP31_10150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CAP31_13920 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CAP31_13615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CAP31_10135 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CAP31_13905 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CAP31_10130 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CAP31_13565 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CAP31_13900 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:sulf00970] D CAP31_10140 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CAP31_11270 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CAP31_13605 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CAP31_13910 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CAP31_10115 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CAP31_13825 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CAP31_07620 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CAP31_08755 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CAP31_06260 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CAP31_08100 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CAP31_11225 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CAP31_02520 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CAP31_12265 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CAP31_11230 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CAP31_12830 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CAP31_12235 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CAP31_02515 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CAP31_10120 tRNA-His K14226 tRNA-His; tRNA His D CAP31_10145 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CAP31_13610 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CAP31_13915 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CAP31_02820 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CAP31_08540 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CAP31_08135 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CAP31_05690 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CAP31_02525 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CAP31_03960 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CAP31_13925 tRNA-Met K14230 tRNA-Met; tRNA Met D CAP31_00335 tRNA-Met K14230 tRNA-Met; tRNA Met D CAP31_04435 tRNA-Met K14230 tRNA-Met; tRNA Met D CAP31_00325 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CAP31_03340 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CAP31_09990 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CAP31_10110 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CAP31_07640 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CAP31_02565 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CAP31_08750 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CAP31_07545 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CAP31_12230 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CAP31_03240 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CAP31_03435 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CAP31_12220 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CAP31_12240 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CAP31_03295 tRNA-Val K14237 tRNA-Val; tRNA Val D CAP31_08105 tRNA-Val K14237 tRNA-Val; tRNA Val D CAP31_08570 tRNA-Val K14237 tRNA-Val; tRNA Val D CAP31_07095 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D CAP31_04865 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAP31_12380 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CAP31_12375 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CAP31_12385 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CAP31_07035 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CAP31_12815 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CAP31_01925 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CAP31_01930 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CAP31_03300 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CAP31_09440 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CAP31_07115 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D CAP31_03040 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CAP31_05540 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CAP31_07000 formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CAP31_00625 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CAP31_10660 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CAP31_11630 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CAP31_03490 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CAP31_10865 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CAP31_01145 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CAP31_11610 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CAP31_10210 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CAP31_03320 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CAP31_03325 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CAP31_13620 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CAP31_07495 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:sulf03060] D CAP31_12050 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CAP31_12215 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CAP31_02815 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CAP31_05670 protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CAP31_05665 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CAP31_05675 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CAP31_14480 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CAP31_02220 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CAP31_12585 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D CAP31_11525 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CAP31_11715 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D CAP31_13395 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CAP31_14585 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CAP31_09025 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CAP31_09070 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CAP31_05275 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CAP31_09065 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CAP31_05270 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CAP31_05265 twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D CAP31_04820 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CAP31_03485 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:sulf04122] D CAP31_08720 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAP31_00105 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAP31_00190 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAP31_01360 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CAP31_01830 preprotein translocase subunit TatC K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CAP31_10765 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CAP31_09105 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CAP31_10735 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CAP31_09085 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CAP31_09530 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CAP31_09100 molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D CAP31_10730 molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D CAP31_11000 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D CAP31_09080 cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CAP31_12780 cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CAP31_10455 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D CAP31_12840 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:sulf03018] D CAP31_11445 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D CAP31_06390 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D CAP31_11695 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CAP31_05460 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CAP31_11890 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CAP31_05415 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CAP31_08545 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CAP31_10090 DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CAP31_01740 transcription termination factor Rho K03628 rho; transcription termination factor Rho D CAP31_07935 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CAP31_12985 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAP31_07540 RNA chaperone Hfq K03666 hfq; host factor-I protein D CAP31_05790 RNA chaperone Hfq K03666 hfq; host factor-I protein D CAP31_10245 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D CAP31_08440 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:sulf03030] D CAP31_07880 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAP31_02740 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CAP31_04410 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CAP31_07965 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CAP31_11640 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CAP31_10650 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CAP31_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CAP31_13810 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CAP31_04425 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CAP31_11995 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAP31_08050 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CAP31_04625 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CAP31_11040 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CAP31_11680 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:sulf03410] D CAP31_02910 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CAP31_01635 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CAP31_13760 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CAP31_04335 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D CAP31_02695 SPO1 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CAP31_12355 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CAP31_13880 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CAP31_11040 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CAP31_05515 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CAP31_11680 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:sulf03420] D CAP31_07865 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CAP31_12005 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CAP31_08505 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CAP31_02700 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CAP31_04145 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CAP31_11040 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CAP31_11680 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CAP31_10845 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] C 03430 Mismatch repair [PATH:sulf03430] D CAP31_03565 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CAP31_06970 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 D CAP31_11875 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D CAP31_04145 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CAP31_05470 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CAP31_03990 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CAP31_05515 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CAP31_11995 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAP31_02740 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CAP31_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CAP31_04410 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CAP31_11640 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CAP31_07965 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CAP31_07880 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAP31_10650 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CAP31_11680 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:sulf03440] D CAP31_05515 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CAP31_11995 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAP31_04650 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CAP31_04400 recombination protein RecR K06187 recR; recombination protein RecR D CAP31_04200 recombinase RecA K03553 recA; recombination protein RecA D CAP31_11040 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CAP31_10435 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CAP31_10430 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CAP31_10440 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CAP31_13480 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CAP31_02740 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CAP31_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CAP31_04410 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CAP31_11640 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CAP31_07965 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CAP31_07880 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAP31_10650 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CAP31_01150 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CAP31_01175 primosomal replication protein N K02686 priB; primosomal replication protein N C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex D CAP31_07215 glycosyltransferase K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:sulf02010] D CAP31_01355 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CAP31_12690 nitrate transporter K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CAP31_01350 nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein D CAP31_12685 nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein D CAP31_01345 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CAP31_12680 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CAP31_01515 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CAP31_01510 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D CAP31_01505 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CAP31_00810 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CAP31_00815 molybdenum ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D CAP31_00820 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CAP31_02015 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CAP31_02020 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D CAP31_02025 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CAP31_07405 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D CAP31_07415 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CAP31_07845 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CAP31_00610 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CAP31_07420 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CAP31_07835 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CAP31_00600 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CAP31_07400 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D CAP31_07425 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CAP31_00605 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CAP31_03450 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CAP31_05120 ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CAP31_02805 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CAP31_02800 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D CAP31_09005 hypothetical protein K02038 pstA; phosphate transport system permease protein D CAP31_02795 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D CAP31_02790 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CAP31_09290 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D CAP31_09275 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CAP31_09280 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CAP31_09285 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CAP31_00450 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D CAP31_00455 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D CAP31_00460 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D CAP31_00465 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D CAP31_00470 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D CAP31_06695 urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D CAP31_06700 urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D CAP31_06705 urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D CAP31_06710 urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D CAP31_06715 urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D CAP31_11805 sugar ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D CAP31_11800 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D CAP31_14050 nodulation protein NodJ K09694 nodJ; lipooligosaccharide transport system permease protein D CAP31_14045 nodulation factor ABC transporter ATP-binding protein NodI K09695 nodI; lipooligosaccharide transport system ATP-binding protein D CAP31_09880 lipoprotein-releasing system transmembrane subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein D CAP31_09875 lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CAP31_10640 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D CAP31_10635 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D CAP31_13255 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CAP31_13405 hypothetical protein K09811 ftsX; cell division transport system permease protein D CAP31_13400 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CAP31_13000 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D CAP31_07630 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter C 02060 Phosphotransferase system (PTS) [PATH:sulf02060] D CAP31_04250 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CAP31_04245 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CAP31_04240 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D CAP31_13240 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:sulf03070] D CAP31_02245 hypothetical protein K12340 tolC; outer membrane protein D CAP31_13755 hypothetical protein K12340 tolC; outer membrane protein D CAP31_05410 hypothetical protein K12340 tolC; outer membrane protein D CAP31_05670 protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CAP31_05665 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CAP31_12215 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CAP31_02815 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CAP31_12050 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CAP31_05675 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CAP31_14480 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CAP31_02220 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CAP31_13395 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CAP31_12585 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D CAP31_11525 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CAP31_09070 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CAP31_05275 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CAP31_09065 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CAP31_05270 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CAP31_05265 twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D CAP31_14665 P-type DNA transfer protein VirB5 K03200 virB5; type IV secretion system protein VirB5 D CAP31_14650 conjugal transfer protein TraH K03201 virB6; type IV secretion system protein VirB6 B B 09132 Signal transduction C 02020 Two-component system [PATH:sulf02020] D CAP31_04390 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CAP31_04385 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D CAP31_03450 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CAP31_05120 ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CAP31_02805 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CAP31_01920 hypothetical protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D CAP31_01915 two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D CAP31_04835 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D CAP31_05050 hypothetical protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CAP31_05045 DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D CAP31_07145 hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF D CAP31_07155 hypothetical protein K07798 cusB; membrane fusion protein, copper/silver efflux system D CAP31_07150 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein D CAP31_08485 flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D CAP31_07230 flagellin K02406 fliC; flagellin D CAP31_06955 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CAP31_06960 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D CAP31_08470 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CAP31_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D CAP31_01295 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D CAP31_01300 DNA-binding response regulator K08083 algR; two-component system, LytTR family, response regulator AlgR D CAP31_07305 two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D CAP31_07310 DNA-binding response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D CAP31_03640 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D CAP31_03645 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D CAP31_03625 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D CAP31_03620 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D CAP31_03595 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D CAP31_03590 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CAP31_03585 pilus assembly protein TadB K12510 tadB; tight adherence protein B D CAP31_03580 type II secretion system protein K12511 tadC; tight adherence protein C D CAP31_11670 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D CAP31_07555 transcriptional regulator K04751 glnB; nitrogen regulatory protein P-II 1 D CAP31_00400 transcriptional regulator K04751 glnB; nitrogen regulatory protein P-II 1 D CAP31_00295 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D CAP31_00290 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D CAP31_06905 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAP31_05935 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAP31_12330 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D CAP31_12325 two-component system response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D CAP31_00180 nif-specific transcriptional activator NifA K02584 nifA; Nif-specific regulatory protein D CAP31_01365 sigma-54-dependent Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein D CAP31_04995 hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D CAP31_05000 response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D CAP31_08935 transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D CAP31_11575 hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D CAP31_11570 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D CAP31_13250 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CAP31_04365 pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA D CAP31_09365 histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CAP31_09355 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D CAP31_11945 Ni/Fe hydrogenase K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D CAP31_11960 hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D CAP31_11125 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CAP31_08295 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CAP31_01620 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CAP31_12555 chemotaxis protein K03776 aer; aerotaxis receptor D CAP31_00220 chemotaxis protein K03776 aer; aerotaxis receptor D CAP31_11120 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CAP31_11130 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CAP31_01615 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CAP31_08315 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CAP31_05995 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_08320 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_11105 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_08280 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CAP31_08325 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CAP31_11100 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CAP31_08285 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CAP31_03235 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CAP31_02275 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D CAP31_02280 hypothetical protein K02659 pilI; twitching motility protein PilI D CAP31_02270 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D CAP31_02290 two-component system response regulator K02657 pilG; twitching motility two-component system response regulator PilG D CAP31_02285 two-component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D CAP31_13695 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CAP31_00850 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CAP31_00835 hypothetical protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D CAP31_00830 two-component system response regulator K15012 regA; two-component system, response regulator RegA D CAP31_03410 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D CAP31_03415 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D CAP31_03420 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D CAP31_08905 cytochrome C K08738 CYC; cytochrome c D CAP31_00445 cytochrome C K08738 CYC; cytochrome c D CAP31_13450 cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D CAP31_10685 cytochrome C subunit protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D CAP31_13445 cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D CAP31_10680 hypothetical protein K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D CAP31_13435 cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D CAP31_11175 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CAP31_11170 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CAP31_11165 cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D CAP31_02245 hypothetical protein K12340 tolC; outer membrane protein D CAP31_13755 hypothetical protein K12340 tolC; outer membrane protein D CAP31_05410 hypothetical protein K12340 tolC; outer membrane protein D CAP31_13035 polysaccharide export protein EpsE K01991 wza; polysaccharide biosynthesis/export protein D CAP31_06385 hypothetical protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D CAP31_08395 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D CAP31_03410 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:sulf02024] D CAP31_07540 RNA chaperone Hfq K03666 hfq; host factor-I protein D CAP31_05790 RNA chaperone Hfq K03666 hfq; host factor-I protein D CAP31_02065 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CAP31_02060 anthranilate/aminodeoxychorismate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CAP31_09365 histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CAP31_09355 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D CAP31_08485 flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D CAP31_00450 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D CAP31_00455 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D CAP31_00460 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D CAP31_00465 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D CAP31_00470 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D CAP31_06640 MBL fold metallo-hydrolase K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81] D CAP31_12695 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAP31_13695 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CAP31_00850 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CAP31_11560 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CAP31_08085 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CAP31_08080 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CAP31_08075 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CAP31_08070 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CAP31_14480 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CAP31_12215 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CAP31_02815 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CAP31_12050 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CAP31_05675 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CAP31_02220 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CAP31_13395 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CAP31_12585 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D CAP31_11525 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:sulf02030] D CAP31_01620 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CAP31_12555 chemotaxis protein K03776 aer; aerotaxis receptor D CAP31_00220 chemotaxis protein K03776 aer; aerotaxis receptor D CAP31_05995 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_08320 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_11105 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_11120 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CAP31_11130 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CAP31_01615 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CAP31_08315 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CAP31_08280 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CAP31_08325 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CAP31_05990 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ D CAP31_08275 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D CAP31_11100 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CAP31_08285 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CAP31_03235 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CAP31_08290 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D CAP31_11125 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CAP31_08295 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CAP31_08210 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CAP31_08240 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CAP31_08245 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CAP31_06960 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D CAP31_08470 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CAP31_06965 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D CAP31_08465 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:sulf02040] D CAP31_08200 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D CAP31_08205 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CAP31_08210 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CAP31_08215 hypothetical protein K02411 fliH; flagellar assembly protein FliH D CAP31_08220 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CAP31_08225 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D CAP31_08230 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D CAP31_08235 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D CAP31_08240 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CAP31_08245 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CAP31_08250 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D CAP31_08255 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CAP31_08260 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CAP31_08265 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CAP31_06940 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CAP31_06935 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CAP31_08390 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D CAP31_08385 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D CAP31_08380 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D CAP31_08375 flagellar biosynthesis protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D CAP31_08370 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D CAP31_08365 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D CAP31_08360 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D CAP31_08355 flagellar biosynthesis protein FlgH K02393 flgH; flagellar L-ring protein FlgH D CAP31_08350 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D CAP31_08345 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D CAP31_08340 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D CAP31_08335 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D CAP31_07230 flagellin K02406 fliC; flagellin D CAP31_07220 flagellar hook protein K02407 fliD; flagellar hook-associated protein 2 D CAP31_07320 flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D CAP31_07325 flagellar protein FliT K02423 fliT; flagellar protein FliT D CAP31_06960 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D CAP31_08470 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CAP31_06965 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D CAP31_08465 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D CAP31_08395 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D CAP31_08400 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D CAP31_04430 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D CAP31_08485 flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D CAP31_13250 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CAP31_06955 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells [PATH:sulf04820] D CAP31_05345 ATPase K01539 ATP1A; sodium/potassium-transporting ATPase subunit alpha [EC:7.2.2.13] D CAP31_11695 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D CAP31_13800 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:sulf01501] D CAP31_12350 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D CAP31_02690 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CAP31_11390 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CAP31_11385 multidrug efflux protein K18138 acrB; multidrug efflux pump D CAP31_02245 hypothetical protein K12340 tolC; outer membrane protein D CAP31_13755 hypothetical protein K12340 tolC; outer membrane protein D CAP31_05410 hypothetical protein K12340 tolC; outer membrane protein D CAP31_02345 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CAP31_12405 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CAP31_02140 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:sulf01502] D CAP31_02185 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CAP31_13815 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CAP31_02150 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CAP31_02155 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CAP31_02170 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:sulf01503] D CAP31_07005 glycosyltransferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D CAP31_06990 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D CAP31_11870 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CAP31_04835 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D CAP31_01135 hypothetical protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CAP31_11390 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CAP31_11385 multidrug efflux protein K18138 acrB; multidrug efflux pump D CAP31_02245 hypothetical protein K12340 tolC; outer membrane protein D CAP31_13755 hypothetical protein K12340 tolC; outer membrane protein D CAP31_05410 hypothetical protein K12340 tolC; outer membrane protein D CAP31_04615 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:sulf01000] C 01001 Protein kinases [BR:sulf01001] D CAP31_04070 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D CAP31_05700 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CAP31_11335 toxin HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CAP31_13045 hypothetical protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D CAP31_04390 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CAP31_01920 hypothetical protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D CAP31_05050 hypothetical protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CAP31_07305 two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D CAP31_01295 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D CAP31_00295 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D CAP31_12330 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D CAP31_04995 hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D CAP31_11575 hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D CAP31_09365 histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CAP31_11250 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D CAP31_11260 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D CAP31_05995 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_08320 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_11105 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_02270 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D CAP31_00835 hypothetical protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D CAP31_11070 hypothetical protein K20971 ladS; two-component system, sensor histidine kinase LadS C 01009 Protein phosphatases and associated proteins [BR:sulf01009] D CAP31_01225 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CAP31_10025 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D CAP31_05705 hypothetical protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D CAP31_13540 phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D CAP31_07870 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:sulf01002] D CAP31_03485 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D CAP31_01785 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CAP31_03635 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D CAP31_11935 peptidase M52 K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D CAP31_06530 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CAP31_03005 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CAP31_14350 glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CAP31_04965 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D CAP31_10715 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CAP31_13890 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D CAP31_03780 hypothetical protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D CAP31_13385 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-] D CAP31_13390 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-] D CAP31_06330 peptidase M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CAP31_10645 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CAP31_05580 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CAP31_11665 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CAP31_01985 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CAP31_02775 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CAP31_10755 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D CAP31_00380 zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D CAP31_00620 protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D CAP31_12785 peptidase M48 K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D CAP31_04835 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D CAP31_03405 2-alkenal reductase K04772 degQ; serine protease DegQ [EC:3.4.21.-] D CAP31_13490 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CAP31_12420 peptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CAP31_13990 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D CAP31_13675 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CAP31_08125 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CAP31_08840 hypothetical protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CAP31_08115 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CAP31_05950 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CAP31_04820 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CAP31_10995 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D CAP31_06405 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-] D CAP31_13135 HslU--HslV peptidase proteolytic subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D CAP31_05015 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CAP31_10100 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D CAP31_10335 metalloprotease PmbA K03592 pmbA; PmbA protein D CAP31_04870 metalloprotease TldD K03568 tldD; TldD protein D CAP31_05775 HflC protein K04087 hflC; modulator of FtsH protease HflC D CAP31_05780 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:sulf01003] D CAP31_07215 glycosyltransferase K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D CAP31_01940 hypothetical protein K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-] D CAP31_04360 hypothetical protein K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-] D CAP31_01110 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D CAP31_10275 starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] D CAP31_00320 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D CAP31_06305 hypothetical protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D CAP31_02345 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CAP31_06345 glycosyl transferase family 1 K21011 pelF; polysaccharide biosynthesis protein PelF D CAP31_03650 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D CAP31_09820 glucan biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D CAP31_13105 glycosyl transferase family 2 K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] C 01005 Lipopolysaccharide biosynthesis proteins [BR:sulf01005] D CAP31_04615 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CAP31_04620 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CAP31_02205 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CAP31_04605 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CAP31_03020 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D CAP31_10545 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CAP31_01205 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CAP31_01210 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CAP31_09595 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D CAP31_02240 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CAP31_03665 hypothetical protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CAP31_11700 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CAP31_10555 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CAP31_13270 phenylphosphate carboxylase subunit delta K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D CAP31_13275 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D CAP31_06575 D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D CAP31_01480 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D CAP31_07370 hypothetical protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D CAP31_01470 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CAP31_12295 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D CAP31_06165 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D CAP31_07820 ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D CAP31_11765 hypothetical protein K13012 wbqP; O-antigen biosynthesis protein WbqP C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:sulf01011] D CAP31_07380 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CAP31_02180 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CAP31_02175 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CAP31_02160 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CAP31_02145 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CAP31_02185 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CAP31_13815 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CAP31_11855 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CAP31_02155 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CAP31_02170 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CAP31_02265 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CAP31_01160 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CAP31_03500 murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D CAP31_02345 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CAP31_06305 hypothetical protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D CAP31_12405 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CAP31_02140 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CAP31_13490 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CAP31_12420 peptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CAP31_13675 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CAP31_13990 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D CAP31_00320 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D CAP31_04965 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D CAP31_03780 hypothetical protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D CAP31_01755 hypothetical protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D CAP31_01735 transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D CAP31_08065 hypothetical protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D CAP31_07635 lytic transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D CAP31_07975 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D CAP31_12415 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D CAP31_11870 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CAP31_03655 N-acetylmuramoyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:sulf01004] D CAP31_08005 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CAP31_08010 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CAP31_04795 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CAP31_07990 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CAP31_04780 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CAP31_06660 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CAP31_08000 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CAP31_04610 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CAP31_08090 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CAP31_10895 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D CAP31_12890 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D CAP31_04890 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CAP31_12695 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAP31_08015 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CAP31_04370 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CAP31_01440 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CAP31_12290 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:sulf01006] D CAP31_03985 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D CAP31_11580 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D CAP31_04575 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CAP31_08145 squalene synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D CAP31_05485 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CAP31_13465 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:sulf01007] D CAP31_04865 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAP31_07035 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CAP31_01100 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D CAP31_13620 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CAP31_07495 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CAP31_03040 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CAP31_01145 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CAP31_05540 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CAP31_03490 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CAP31_10660 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CAP31_11630 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CAP31_10865 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CAP31_10210 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CAP31_01925 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CAP31_01930 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CAP31_09440 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CAP31_11610 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CAP31_03300 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CAP31_12815 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CAP31_03320 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CAP31_03325 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CAP31_08510 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CAP31_03375 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CAP31_07675 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CAP31_09920 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CAP31_05315 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CAP31_01705 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CAP31_11745 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CAP31_03520 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CAP31_01750 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CAP31_04910 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CAP31_01090 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D CAP31_09930 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CAP31_00090 aminotransferase DegT K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:sulf00194] D CAP31_14405 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CAP31_09660 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CAP31_14410 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CAP31_09665 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CAP31_14415 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CAP31_09625 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CAP31_14420 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CAP31_09630 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CAP31_14425 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CAP31_14430 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CAP31_09635 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CAP31_14435 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CAP31_09640 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CAP31_14440 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CAP31_09645 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CAP31_09655 F0F1 ATP synthase subunit K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:sulf03000] D CAP31_08675 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CAP31_12600 bifunctional transcriptional regulator/O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D CAP31_11405 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D CAP31_05615 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D CAP31_00375 transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D CAP31_00425 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D CAP31_08890 transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D CAP31_01120 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D CAP31_04725 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D CAP31_11495 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D CAP31_09295 phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D CAP31_01540 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D CAP31_11005 nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D CAP31_04215 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D CAP31_04675 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CAP31_11400 hypothetical protein K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D CAP31_09830 hypothetical protein K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility D CAP31_04255 hypothetical protein K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D CAP31_14505 Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D CAP31_14530 mercuric resistance transcriptional repressor protein MerD K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D CAP31_08955 heavy metal-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D CAP31_05590 ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CAP31_13695 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CAP31_00850 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CAP31_01105 hypothetical protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D CAP31_09965 hypothetical protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D CAP31_08725 Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D CAP31_13205 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D CAP31_09010 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CAP31_14570 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CAP31_07450 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CAP31_05165 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CAP31_13705 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CAP31_10620 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CAP31_03685 hypothetical protein K07724 ner; Ner family transcriptional regulator D CAP31_11330 hypothetical protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D CAP31_07795 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D CAP31_00180 nif-specific transcriptional activator NifA K02584 nifA; Nif-specific regulatory protein D CAP31_01365 sigma-54-dependent Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein D CAP31_10740 hypothetical protein K02019 modE; molybdate transport system regulatory protein D CAP31_00805 molybdenum-dependent transcriptional regulator K02019 modE; molybdate transport system regulatory protein D CAP31_05940 nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D CAP31_01400 CopG family transcriptional regulator K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D CAP31_07530 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D CAP31_14450 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CAP31_05360 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D CAP31_04975 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CAP31_13780 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CAP31_03255 hypothetical protein K07733 alpA; prophage regulatory protein D CAP31_02670 hypothetical protein K07733 alpA; prophage regulatory protein D CAP31_13790 hypothetical protein K07735 algH; putative transcriptional regulator D CAP31_05450 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D CAP31_04025 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor D CAP31_11555 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D CAP31_02125 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:sulf03021] D CAP31_12020 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CAP31_12185 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CAP31_12180 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CAP31_13510 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CAP31_04430 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D CAP31_03360 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D CAP31_04855 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CAP31_13410 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D CAP31_13250 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CAP31_06955 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CAP31_02535 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D CAP31_04180 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D CAP31_12210 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CAP31_03425 glutathione S-transferase K03599 sspA; stringent starvation protein A D CAP31_03430 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D CAP31_04850 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA D CAP31_04845 hypothetical protein K03598 rseB; sigma-E factor negative regulatory protein RseB D CAP31_04840 hypothetical protein K03803 rseC; sigma-E factor negative regulatory protein RseC D CAP31_05450 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D CAP31_04025 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor D CAP31_02755 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D CAP31_02095 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D CAP31_01740 transcription termination factor Rho K03628 rho; transcription termination factor Rho D CAP31_06410 hypothetical protein K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:sulf03019] D CAP31_06390 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D CAP31_02455 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-] D CAP31_04810 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CAP31_08545 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CAP31_10760 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CAP31_11890 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CAP31_05415 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CAP31_10090 DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CAP31_11695 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CAP31_05460 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CAP31_01740 transcription termination factor Rho K03628 rho; transcription termination factor Rho D CAP31_07935 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CAP31_12985 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAP31_07540 RNA chaperone Hfq K03666 hfq; host factor-I protein D CAP31_05790 RNA chaperone Hfq K03666 hfq; host factor-I protein D CAP31_10245 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D CAP31_08440 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CAP31_11445 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D CAP31_13230 RNase adaptor protein RapZ K06958 rapZ; RNase adapter protein RapZ D CAP31_10465 ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:sulf03011] D CAP31_06545 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CAP31_04555 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CAP31_12120 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CAP31_12025 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CAP31_12065 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CAP31_01170 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CAP31_12170 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CAP31_12080 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CAP31_13645 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CAP31_12155 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CAP31_12030 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CAP31_12175 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CAP31_12035 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CAP31_12085 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CAP31_05465 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CAP31_11660 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CAP31_12105 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CAP31_01180 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CAP31_12130 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CAP31_03505 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CAP31_04415 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CAP31_12200 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CAP31_12135 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CAP31_12150 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CAP31_12145 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CAP31_12090 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CAP31_12075 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CAP31_01185 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CAP31_12195 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CAP31_12205 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CAP31_12190 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CAP31_13650 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CAP31_12100 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CAP31_12055 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CAP31_12115 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CAP31_12015 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CAP31_12070 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CAP31_11645 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CAP31_03315 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CAP31_11585 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CAP31_12125 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CAP31_12140 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CAP31_12095 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CAP31_11590 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CAP31_01000 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CAP31_12110 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CAP31_12060 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CAP31_00340 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CAP31_08020 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CAP31_00995 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CAP31_14495 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CAP31_03310 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CAP31_12040 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CAP31_12255 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D CAP31_10130 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CAP31_13565 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CAP31_13900 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CAP31_10150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CAP31_13920 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CAP31_13615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CAP31_10135 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CAP31_13905 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:sulf03009] D CAP31_04810 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CAP31_04070 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D CAP31_10760 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CAP31_04655 GTPase Era K03595 era; GTPase D CAP31_11595 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D CAP31_05450 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D CAP31_04025 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor D CAP31_02535 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D CAP31_04180 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D CAP31_12210 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CAP31_14000 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D CAP31_01950 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CAP31_12340 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CAP31_12875 SAM-dependent methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CAP31_13380 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CAP31_00945 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CAP31_14465 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CAP31_02130 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CAP31_01460 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CAP31_08550 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CAP31_02770 23S rRNA (uridine(2552)-2'-O)-methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D CAP31_09735 23S rRNA (adenine(1618)-N(6))-methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D CAP31_02465 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D CAP31_03215 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D CAP31_02415 RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D CAP31_06975 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D CAP31_10190 23S rRNA (adenine(2503)-C(2))-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CAP31_10565 23S rRNA (uracil(1939)-C(5))-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D CAP31_10495 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CAP31_06395 RNA pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CAP31_08425 23S rRNA pseudouridine(1911/1915/1917) synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CAP31_10785 hypothetical protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D CAP31_03210 RNA-binding protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D CAP31_08680 pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D CAP31_06475 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CAP31_11655 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D CAP31_08405 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D CAP31_08685 30s ribosomal protein S12 methylthiotransferase accessory protein YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D CAP31_14390 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D CAP31_05575 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D CAP31_13945 cupin K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D CAP31_06390 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D CAP31_02455 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-] D CAP31_13785 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CAP31_12665 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D CAP31_03560 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CAP31_10230 ribosome biogenesis GTPase Der K03977 engA; GTPase D CAP31_01235 ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D CAP31_05785 GTPase HflX K03665 hflX; GTPase D CAP31_06825 GTPase HflX K03665 hflX; GTPase D CAP31_03180 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CAP31_10605 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CAP31_13505 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CAP31_02545 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CAP31_02530 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D CAP31_08490 RNA-binding protein K14761 rlbA; ribosome-associated protein D CAP31_02470 ribosome silencing factor K09710 ybeB; ribosome-associated protein D CAP31_00900 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D CAP31_02765 RNA-binding protein K07574 yhbY; RNA-binding protein D CAP31_10340 hypothetical protein K09889 yjgA; ribosome-associated protein D CAP31_13245 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D CAP31_12245 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D CAP31_08025 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:sulf03016] D CAP31_12300 multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D CAP31_10060 RNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D CAP31_10065 archease K24956 ZBTB8OS; protein archease D CAP31_04865 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAP31_11610 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CAP31_03490 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CAP31_11630 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CAP31_05540 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CAP31_07035 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CAP31_01145 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CAP31_10865 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CAP31_12815 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CAP31_03300 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CAP31_09440 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CAP31_03040 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CAP31_10660 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CAP31_10210 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CAP31_03320 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CAP31_03325 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CAP31_13620 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CAP31_07495 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CAP31_05280 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CAP31_12850 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CAP31_02965 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CAP31_08720 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAP31_00105 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAP31_00190 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAP31_03180 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CAP31_10605 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CAP31_05485 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CAP31_14475 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CAP31_14470 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CAP31_09370 selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D CAP31_04440 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CAP31_14490 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CAP31_02090 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D CAP31_13545 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D CAP31_13980 ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D CAP31_05095 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D CAP31_01925 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CAP31_01930 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CAP31_01100 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D CAP31_07810 tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CAP31_10625 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D CAP31_00890 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CAP31_08735 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D CAP31_11650 tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CAP31_04220 tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CAP31_03050 rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D CAP31_10765 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CAP31_13005 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D CAP31_01830 preprotein translocase subunit TatC K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CAP31_08710 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D CAP31_00205 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D CAP31_00135 IscN protein K13628 iscA; iron-sulfur cluster assembly protein D CAP31_11540 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ D CAP31_05685 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D CAP31_11080 hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CAP31_10385 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CAP31_10390 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CAP31_11535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D CAP31_11860 tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D CAP31_09375 tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D CAP31_05680 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CAP31_13960 tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CAP31_06470 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CAP31_04380 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CAP31_11865 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CAP31_13560 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D CAP31_08545 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CAP31_05460 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:sulf03012] D CAP31_02540 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CAP31_03305 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CAP31_04455 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D CAP31_04560 translation elongation factor Ts K02357 tsf; elongation factor Ts D CAP31_12160 elongation factor Tu K02358 tuf; elongation factor Tu D CAP31_12225 elongation factor Tu K02358 tuf; elongation factor Tu D CAP31_12165 elongation factor G K02355 fusA; elongation factor G D CAP31_07100 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D CAP31_04570 ribosome recycling factor K02838 frr; ribosome recycling factor D CAP31_10580 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CAP31_12250 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CAP31_12045 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CAP31_10720 elongation factor P K02356 efp; elongation factor P D CAP31_09900 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D CAP31_07045 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:sulf03110] D CAP31_10805 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D CAP31_09470 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CAP31_08120 ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CAP31_13130 HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D CAP31_10025 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D CAP31_07935 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CAP31_08700 Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D CAP31_00210 Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D CAP31_12985 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAP31_07940 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CAP31_04315 cytochrome C biogenesis protein K05516 cbpA; curved DNA-binding protein D CAP31_08705 Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D CAP31_04355 Hsp33 family molecular chaperone K04083 hslO; molecular chaperone Hsp33 D CAP31_07930 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D CAP31_05975 heat-shock protein K13993 HSP20; HSP20 family protein D CAP31_06440 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein D CAP31_12980 co-chaperone GroES K04078 groES; chaperonin GroES D CAP31_04835 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D CAP31_02775 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CAP31_14440 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CAP31_09645 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CAP31_12585 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D CAP31_00840 hypothetical protein K09796 pccA; periplasmic copper chaperone A D CAP31_11925 hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D CAP31_11375 hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D CAP31_11920 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D CAP31_11380 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D CAP31_03025 cyclophilin K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CAP31_08095 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D CAP31_05805 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D CAP31_03480 hypothetical protein K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D CAP31_13950 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D CAP31_07535 hypothetical protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D CAP31_01960 molecular chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D CAP31_14295 thiol reductase thioredoxin K03671 TXN; thioredoxin D CAP31_00405 thioredoxin K03671 TXN; thioredoxin D CAP31_01745 thioredoxin K03671 TXN; thioredoxin D CAP31_03660 hypothetical protein K03671 TXN; thioredoxin D CAP31_05375 thiol reductase thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D CAP31_05385 glutaredoxin 3 K03676 grxC; glutaredoxin 3 D CAP31_00025 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D CAP31_11340 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D CAP31_01135 hypothetical protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CAP31_02000 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D CAP31_14365 thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D CAP31_08980 hypothetical protein K03805 dsbG; thiol:disulfide interchange protein DsbG C 04131 Membrane trafficking [BR:sulf04131] D CAP31_10185 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CAP31_14585 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CAP31_09025 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CAP31_09565 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CAP31_00925 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CAP31_09385 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D CAP31_00915 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CAP31_10025 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:sulf03051] D CAP31_10025 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:sulf03032] D CAP31_08050 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CAP31_08675 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CAP31_10845 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D CAP31_08110 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D CAP31_03740 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D CAP31_03330 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CAP31_06550 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CAP31_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D CAP31_13810 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CAP31_04425 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CAP31_11995 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAP31_02740 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CAP31_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CAP31_10650 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CAP31_11640 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CAP31_07965 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CAP31_07880 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAP31_04410 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CAP31_04625 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CAP31_11040 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CAP31_11680 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CAP31_13835 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D CAP31_09935 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CAP31_00015 DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CAP31_06215 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CAP31_00650 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:sulf03036] D CAP31_07215 glycosyltransferase K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D CAP31_08675 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CAP31_04810 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CAP31_09565 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CAP31_08110 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D CAP31_03740 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D CAP31_03330 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CAP31_06550 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CAP31_04315 cytochrome C biogenesis protein K05516 cbpA; curved DNA-binding protein D CAP31_04310 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM D CAP31_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D CAP31_10620 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CAP31_07540 RNA chaperone Hfq K03666 hfq; host factor-I protein D CAP31_05790 RNA chaperone Hfq K03666 hfq; host factor-I protein D CAP31_04675 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CAP31_07060 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D CAP31_10505 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D CAP31_10500 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D CAP31_02195 cell division protein FtsA K03590 ftsA; cell division protein FtsA D CAP31_11690 cell division protein FtsB K05589 ftsB; cell division protein FtsB D CAP31_13400 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CAP31_02140 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CAP31_05190 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CAP31_02135 cell division protein FtsL K03586 ftsL; cell division protein FtsL D CAP31_02190 hypothetical protein K03589 ftsQ; cell division protein FtsQ D CAP31_02165 putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D CAP31_13405 hypothetical protein K09811 ftsX; cell division transport system permease protein D CAP31_02200 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CAP31_14110 cell division protein ZapA K09888 zapA; cell division protein ZapA D CAP31_14115 hypothetical protein K09892 zapB; cell division protein ZapB D CAP31_01775 cell division protein ZapD K18778 zapD; cell division protein ZapD D CAP31_11870 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CAP31_11390 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CAP31_11005 nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D CAP31_12390 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CAP31_12395 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D CAP31_12400 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D CAP31_12410 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D CAP31_14460 chromosome partitioning protein K03496 parA; chromosome partitioning protein D CAP31_14695 peptide transporter K03496 parA; chromosome partitioning protein D CAP31_03155 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D CAP31_00440 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D CAP31_14450 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CAP31_14470 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CAP31_14465 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CAP31_01190 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D CAP31_02495 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D CAP31_11435 Fe-S-binding ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D CAP31_01260 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D CAP31_02330 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:sulf03400] D CAP31_02490 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CAP31_00495 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D CAP31_01635 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CAP31_02910 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CAP31_10845 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D CAP31_01030 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CAP31_12945 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CAP31_01015 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CAP31_12600 bifunctional transcriptional regulator/O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D CAP31_02695 SPO1 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CAP31_04335 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D CAP31_13760 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CAP31_12355 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CAP31_13880 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CAP31_05515 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CAP31_11680 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CAP31_11040 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CAP31_12005 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CAP31_08505 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CAP31_02700 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CAP31_04145 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CAP31_12185 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CAP31_12180 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CAP31_12020 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CAP31_13510 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CAP31_07865 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CAP31_03565 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CAP31_06970 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 D CAP31_11875 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D CAP31_05470 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CAP31_03990 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CAP31_02740 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CAP31_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CAP31_10650 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CAP31_11640 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CAP31_07965 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CAP31_07880 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAP31_04410 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CAP31_11995 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAP31_08665 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D CAP31_04200 recombinase RecA K03553 recA; recombination protein RecA D CAP31_10435 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CAP31_10430 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CAP31_10440 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CAP31_01150 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CAP31_01175 primosomal replication protein N K02686 priB; primosomal replication protein N D CAP31_07485 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D CAP31_13480 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CAP31_04650 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CAP31_04400 recombination protein RecR K06187 recR; recombination protein RecR D CAP31_05370 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D CAP31_01935 hypothetical protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D CAP31_12960 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D CAP31_12610 subtype I-E CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D CAP31_11345 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D CAP31_09935 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CAP31_00015 DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CAP31_06215 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CAP31_00650 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CAP31_08110 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D CAP31_03740 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D CAP31_10620 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CAP31_03330 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CAP31_06550 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CAP31_10090 DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CAP31_05945 DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V D CAP31_05950 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CAP31_04205 recombination regulator RecX K03565 recX; regulatory protein D CAP31_04030 DNA polymerase III K02347 polX; DNA polymerase (family X) D CAP31_01430 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D CAP31_07480 helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CAP31_09780 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CAP31_09775 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:sulf03029] D CAP31_03415 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D CAP31_02540 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CAP31_03305 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CAP31_04560 translation elongation factor Ts K02357 tsf; elongation factor Ts D CAP31_12160 elongation factor Tu K02358 tuf; elongation factor Tu D CAP31_12225 elongation factor Tu K02358 tuf; elongation factor Tu D CAP31_12165 elongation factor G K02355 fusA; elongation factor G D CAP31_04655 GTPase Era K03595 era; GTPase D CAP31_13620 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CAP31_11630 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CAP31_01145 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CAP31_12380 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CAP31_12375 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CAP31_12385 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CAP31_11995 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAP31_04595 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D CAP31_07935 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CAP31_07930 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D CAP31_12985 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAP31_12980 co-chaperone GroES K04078 groES; chaperonin GroES D CAP31_07940 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CAP31_04920 Zn-dependent hydrolase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18] D CAP31_08720 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAP31_00105 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAP31_00190 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAP31_08705 Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D CAP31_00025 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D CAP31_11340 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D CAP31_11435 Fe-S-binding ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D CAP31_14480 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CAP31_13455 SCO family protein K07152 SCO1; protein SCO1 D CAP31_10025 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:sulf02000] D CAP31_13000 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D CAP31_11815 ATPase K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-] D CAP31_07630 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D CAP31_11315 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CAP31_09705 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CAP31_08045 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D CAP31_00810 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CAP31_00815 molybdenum ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D CAP31_00820 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CAP31_01355 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CAP31_12690 nitrate transporter K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CAP31_01350 nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein D CAP31_12685 nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein D CAP31_01345 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CAP31_12680 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CAP31_01515 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CAP31_01510 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D CAP31_01505 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CAP31_02015 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CAP31_02020 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D CAP31_02025 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CAP31_06675 nitrate ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D CAP31_05915 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D CAP31_06590 nitrate transport permease nrtB K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CAP31_05920 nitrate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CAP31_06595 sulfonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CAP31_05925 ABC transporter K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CAP31_07415 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CAP31_07845 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CAP31_00610 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CAP31_07420 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CAP31_07835 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CAP31_00600 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CAP31_07425 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CAP31_00605 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CAP31_00615 hypothetical protein K18480 linN; cholesterol transport system auxiliary component D CAP31_07405 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D CAP31_07400 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D CAP31_03450 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CAP31_05120 ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CAP31_02805 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CAP31_02800 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D CAP31_09005 hypothetical protein K02038 pstA; phosphate transport system permease protein D CAP31_02795 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D CAP31_02790 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CAP31_09290 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D CAP31_09275 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CAP31_09280 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CAP31_09285 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CAP31_00450 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D CAP31_00455 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D CAP31_00460 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D CAP31_00465 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D CAP31_00470 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D CAP31_06695 urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D CAP31_06700 urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D CAP31_06705 urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D CAP31_06710 urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D CAP31_06715 urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D CAP31_08085 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CAP31_08080 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CAP31_08075 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CAP31_08070 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CAP31_06625 hypothetical protein K09818 ABC.MN.S; manganese/iron transport system substrate-binding protein D CAP31_13150 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D CAP31_13145 zinc/manganese transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D CAP31_06630 hypothetical protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein D CAP31_11805 sugar ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D CAP31_11800 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D CAP31_10640 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D CAP31_10635 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D CAP31_13255 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CAP31_14050 nodulation protein NodJ K09694 nodJ; lipooligosaccharide transport system permease protein D CAP31_14045 nodulation factor ABC transporter ATP-binding protein NodI K09695 nodI; lipooligosaccharide transport system ATP-binding protein D CAP31_07260 antibiotic ABC transporter permease K25180 ybhR; drug efflux transport system permease protein D CAP31_07265 hypothetical protein K25181 ybhS; drug efflux transport system permease protein D CAP31_07275 hemolysin D K25183 ybhG; membrane fusion protein YbhG D CAP31_09880 lipoprotein-releasing system transmembrane subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein D CAP31_09875 lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CAP31_13405 hypothetical protein K09811 ftsX; cell division transport system permease protein D CAP31_13400 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CAP31_07390 metal-dependent hydrolase K01992 ABC-2.P; ABC-2 type transport system permease protein D CAP31_07395 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CAP31_10885 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D CAP31_12495 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D CAP31_13735 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein D CAP31_09715 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein D CAP31_10890 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CAP31_12510 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CAP31_13740 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CAP31_09720 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CAP31_02925 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D CAP31_12725 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CAP31_10155 lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D CAP31_07475 lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D CAP31_12350 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D CAP31_04020 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D CAP31_01565 emrB; MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D CAP31_04250 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CAP31_04245 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CAP31_04240 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D CAP31_13240 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CAP31_03200 hypothetical protein K10716 kch; voltage-gated potassium channel D CAP31_02100 ammonium transporter K03320 amt; ammonium transporter, Amt family D CAP31_06775 ammonia channel protein K03320 amt; ammonium transporter, Amt family D CAP31_13840 ammonia channel protein K03320 amt; ammonium transporter, Amt family D CAP31_05260 ammonium transporter K03320 amt; ammonium transporter, Amt family D CAP31_03390 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CAP31_00875 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CAP31_03425 glutathione S-transferase K03599 sspA; stringent starvation protein A D CAP31_06785 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D CAP31_06790 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D CAP31_06795 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D CAP31_11470 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D CAP31_11475 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D CAP31_10575 hypothetical protein K19416 yccA; modulator of FtsH protease D CAP31_13725 large-conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D CAP31_09835 mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel D CAP31_06250 hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel D CAP31_12990 magnesium transporter K06213 mgtE; magnesium transporter D CAP31_06960 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D CAP31_08470 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CAP31_06965 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D CAP31_08465 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D CAP31_13175 flagellar motor protein MotA K03561 exbB; biopolymer transport protein ExbB D CAP31_10530 flagellar motor protein MotA K03561 exbB; biopolymer transport protein ExbB D CAP31_14065 hypothetical protein K03561 exbB; biopolymer transport protein ExbB D CAP31_13170 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D CAP31_14080 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D CAP31_10535 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D CAP31_10420 protein TolQ K03562 tolQ; biopolymer transport protein TolQ D CAP31_10415 protein TolR K03560 tolR; biopolymer transport protein TolR D CAP31_01610 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D CAP31_10485 fluoride ion transporter CrcB K06199 crcB; fluoride exporter D CAP31_05175 bestrophin K08994 yneE; ion channel-forming bestrophin family protein D CAP31_14510 mercuric transport protein K08363 merT; mercuric ion transport protein D CAP31_04260 mercuric transport protein K08363 merT; mercuric ion transport protein D CAP31_04265 mercuric transport protein periplasmic component K08364 merP; periplasmic mercuric ion binding protein D CAP31_14515 mercuric transport protein periplasmic component K08364 merP; periplasmic mercuric ion binding protein D CAP31_14520 mercury transport protein MerC K19058 merC; mercuric ion transport protein D CAP31_14535 mercury resistance protein K19059 merE; mercuric ion transport protein D CAP31_04050 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CAP31_01800 magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D CAP31_10460 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D CAP31_01905 long-chain fatty acid transporter K06076 fadL; long-chain fatty acid transport protein D CAP31_01910 long-chain fatty acid transporter K06076 fadL; long-chain fatty acid transport protein D CAP31_14130 hypothetical protein K16092 btuB; vitamin B12 transporter D CAP31_00860 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CAP31_14070 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CAP31_00385 hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system D CAP31_00665 hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system D CAP31_09850 hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system D CAP31_02245 hypothetical protein K12340 tolC; outer membrane protein D CAP31_13755 hypothetical protein K12340 tolC; outer membrane protein D CAP31_05410 hypothetical protein K12340 tolC; outer membrane protein D CAP31_12500 hypothetical protein K18904 nodT; outer membrane protein, multidrug efflux system D CAP31_13035 polysaccharide export protein EpsE K01991 wza; polysaccharide biosynthesis/export protein D CAP31_04595 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D CAP31_10225 outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D CAP31_10520 hypothetical protein K07287 bamC; outer membrane protein assembly factor BamC D CAP31_08430 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D CAP31_05595 hypothetical protein K06186 bamE; outer membrane protein assembly factor BamE D CAP31_12970 hypothetical protein K07278 tamA; translocation and assembly module TamA D CAP31_12975 hypothetical protein K09800 tamB; translocation and assembly module TamB D CAP31_12450 hypothetical protein K21449 ata; trimeric autotransporter adhesin D CAP31_13260 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D CAP31_13265 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D CAP31_01965 hypothetical protein K04744 lptD; LPS-assembly protein D CAP31_11635 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D CAP31_00905 magnesium/cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein D CAP31_05140 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D CAP31_08415 ZIP zinc transporter K16267 zipB; zinc and cadmium transporter D CAP31_09855 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D CAP31_00395 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D CAP31_00675 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D CAP31_07150 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein D CAP31_11385 multidrug efflux protein K18138 acrB; multidrug efflux pump D CAP31_04665 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D CAP31_12535 calcium:proton antiporter K07300 chaA; Ca2+:H+ antiporter D CAP31_11565 sodium:proton exchanger K07301 yrbG; cation:H+ antiporter D CAP31_04895 cation acetate symporter K14393 actP; cation/acetate symporter D CAP31_09740 sodium:proton antiporter K24160 NHA1; sodium/hydrogen antiporter D CAP31_13280 potassium transporter K03455 KEA1_2_3; K+:H+ antiporter D CAP31_12480 sodium:proton antiporter K26730 napA; Na+:H+ antiporter D CAP31_04745 sodium:proton antiporter K26731 CHX; K+:H+ antiporter D CAP31_01115 chloride channel protein K03281 clcA; chloride channel protein, CIC family D CAP31_04305 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family D CAP31_05860 hypothetical protein K03321 TC.SULP; sulfate permease, SulP family D CAP31_12860 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family D CAP31_12870 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family D CAP31_14585 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CAP31_09025 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CAP31_07440 arsenical efflux pump membrane protein ArsB K03893 arsB; arsenical pump membrane protein D CAP31_14600 arsenical efflux pump membrane protein ArsB K03893 arsB; arsenical pump membrane protein D CAP31_09040 arsenical efflux pump membrane protein ArsB K03893 arsB; arsenical pump membrane protein D CAP31_03500 murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D CAP31_01070 hypothetical protein K24180 mleP; malate permease and related proteins D CAP31_02720 trkD; potassium transporter Kup K03549 kup; KUP system potassium uptake protein D CAP31_13865 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D CAP31_03045 hypothetical protein K05595 marC; multiple antibiotic resistance protein D CAP31_02165 putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D CAP31_10855 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein D CAP31_13165 hypothetical protein K03832 tonB; periplasmic protein TonB D CAP31_02085 hypothetical protein K03832 tonB; periplasmic protein TonB D CAP31_13975 energy transducer TonB K03832 tonB; periplasmic protein TonB D CAP31_14075 hypothetical protein K03832 tonB; periplasmic protein TonB D CAP31_10400 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D CAP31_10410 protein TolA K03646 tolA; colicin import membrane protein D CAP31_14640 hypothetical protein K03646 tolA; colicin import membrane protein D CAP31_10405 Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D CAP31_08970 cytochrome C biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein D CAP31_08920 arsenate reductase (azurin) small subunit K08355 aoxA; arsenite oxidase small subunit [EC:1.20.2.1 1.20.9.1] D CAP31_08915 arsenate reductase (azurin) large subunit K08356 aoxB; arsenite oxidase large subunit [EC:1.20.2.1 1.20.9.1] D CAP31_01560 EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system D CAP31_00390 efflux transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D CAP31_00670 hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system D CAP31_09860 hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system D CAP31_07155 hypothetical protein K07798 cusB; membrane fusion protein, copper/silver efflux system D CAP31_05405 hypothetical protein K18302 mexJ; membrane fusion protein, multidrug efflux system D CAP31_11390 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CAP31_13045 hypothetical protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D CAP31_13040 chain length determinant protein EpsF K25590 epsF; protein tyrosine kinase modulator D CAP31_10310 hypothetical protein K04758 feoA; ferrous iron transport protein A D CAP31_10315 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:sulf02044] D CAP31_02245 hypothetical protein K12340 tolC; outer membrane protein D CAP31_13755 hypothetical protein K12340 tolC; outer membrane protein D CAP31_05410 hypothetical protein K12340 tolC; outer membrane protein D CAP31_01785 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CAP31_04365 pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA D CAP31_13340 secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D CAP31_01795 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D CAP31_13335 secretion system protein K02653 pilC; type IV pilus assembly protein PilC D CAP31_01790 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D CAP31_08160 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE D CAP31_10195 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D CAP31_02290 two-component system response regulator K02657 pilG; twitching motility two-component system response regulator PilG D CAP31_02285 two-component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D CAP31_02280 hypothetical protein K02659 pilI; twitching motility protein PilI D CAP31_02275 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D CAP31_02350 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D CAP31_02355 fimbrial protein K02663 pilN; type IV pilus assembly protein PilN D CAP31_02360 pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D CAP31_02365 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D CAP31_02370 pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ D CAP31_02425 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D CAP31_02420 type IV pili twitching motility protein PilT K02670 pilU; twitching motility protein PilU D CAP31_08170 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D CAP31_08175 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D CAP31_08180 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D CAP31_08185 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D CAP31_07960 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D CAP31_08165 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT D CAP31_02955 hypothetical protein K08086 fimV; pilus assembly protein FimV D CAP31_03635 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D CAP31_03625 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D CAP31_03620 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D CAP31_03595 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D CAP31_03590 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CAP31_03585 pilus assembly protein TadB K12510 tadB; tight adherence protein B D CAP31_03580 type II secretion system protein K12511 tadC; tight adherence protein C D CAP31_03640 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D CAP31_03645 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D CAP31_04525 hypothetical protein K10924 mshA; MSHA pilin protein MshA D CAP31_04520 hypothetical protein K10925 mshB; MSHA pilin protein MshB D CAP31_04515 hypothetical protein K10926 mshC; MSHA pilin protein MshC D CAP31_04510 hypothetical protein K10927 mshD; MSHA pilin protein MshD D CAP31_04535 MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE D CAP31_04530 MSHA biogenesis protein MshG K12278 mshG; MSHA biogenesis protein MshG D CAP31_04490 agglutinin biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI D CAP31_04480 hypothetical protein K12280 mshJ; MSHA biogenesis protein MshJ D CAP31_04475 hypothetical protein K12281 mshK; MSHA biogenesis protein MshK D CAP31_04470 pilus (MSHA type) biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL D CAP31_13350 Type II secretory pathway component PulD K12282 mshL; MSHA biogenesis protein MshL D CAP31_04465 AAA family ATPase K12283 mshM; MSHA biogenesis protein MshM D CAP31_04460 hypothetical protein K12284 mshN; MSHA biogenesis protein MshN D CAP31_04505 hypothetical protein K12285 mshO; MSHA biogenesis protein MshO D CAP31_04500 hypothetical protein K12286 mshP; MSHA biogenesis protein MshP D CAP31_04495 hypothetical protein K12287 mshQ; MSHA biogenesis protein MshQ D CAP31_02440 osmotic-shock protein K02221 yggT; YggT family protein D CAP31_08500 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D CAP31_06940 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CAP31_06935 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CAP31_07335 flagellar biosynthesis protein K04061 flhB2; flagellar biosynthesis protein D CAP31_08205 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CAP31_08215 hypothetical protein K02411 fliH; flagellar assembly protein FliH D CAP31_08220 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CAP31_08245 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CAP31_08250 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D CAP31_08255 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CAP31_08260 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CAP31_08265 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CAP31_14665 P-type DNA transfer protein VirB5 K03200 virB5; type IV secretion system protein VirB5 D CAP31_14650 conjugal transfer protein TraH K03201 virB6; type IV secretion system protein VirB6 D CAP31_02000 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D CAP31_02220 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CAP31_12585 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D CAP31_05670 protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CAP31_12215 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CAP31_05665 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CAP31_02815 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CAP31_12050 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CAP31_11525 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CAP31_13395 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CAP31_05675 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CAP31_14480 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CAP31_09070 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CAP31_05275 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CAP31_09065 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CAP31_05270 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CAP31_05265 twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:sulf02042] D CAP31_04050 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CAP31_01800 magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D CAP31_00485 hemolysin III K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:sulf02022] D CAP31_04390 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CAP31_04385 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D CAP31_01920 hypothetical protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D CAP31_01915 two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D CAP31_05050 hypothetical protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CAP31_05045 DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D CAP31_00680 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D CAP31_07305 two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D CAP31_07310 DNA-binding response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D CAP31_01295 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D CAP31_01300 DNA-binding response regulator K08083 algR; two-component system, LytTR family, response regulator AlgR D CAP31_00295 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D CAP31_00290 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D CAP31_12330 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D CAP31_12325 two-component system response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D CAP31_04995 hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D CAP31_05000 response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D CAP31_08935 transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D CAP31_11575 hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D CAP31_11570 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D CAP31_09365 histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CAP31_09355 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D CAP31_11250 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D CAP31_11260 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D CAP31_05995 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_08320 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_11105 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_08280 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CAP31_08325 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CAP31_11100 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CAP31_08285 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CAP31_03235 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CAP31_02270 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D CAP31_02290 two-component system response regulator K02657 pilG; twitching motility two-component system response regulator PilG D CAP31_02285 two-component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D CAP31_00835 hypothetical protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D CAP31_00830 two-component system response regulator K15012 regA; two-component system, response regulator RegA D CAP31_12715 hypothetical protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator D CAP31_11070 hypothetical protein K20971 ladS; two-component system, sensor histidine kinase LadS C 02035 Bacterial motility proteins [BR:sulf02035] D CAP31_05995 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_08320 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_11105 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CAP31_11120 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CAP31_11130 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CAP31_01615 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CAP31_08315 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CAP31_08290 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D CAP31_11125 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CAP31_08295 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CAP31_11100 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CAP31_08285 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CAP31_08280 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CAP31_08325 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CAP31_05990 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ D CAP31_08275 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D CAP31_03235 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CAP31_01620 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CAP31_12555 chemotaxis protein K03776 aer; aerotaxis receptor D CAP31_00220 chemotaxis protein K03776 aer; aerotaxis receptor D CAP31_08215 hypothetical protein K02411 fliH; flagellar assembly protein FliH D CAP31_08220 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CAP31_08225 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D CAP31_08250 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D CAP31_08255 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CAP31_08260 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CAP31_08265 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CAP31_06940 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CAP31_06935 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CAP31_08210 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CAP31_08240 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CAP31_08245 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CAP31_08205 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CAP31_08350 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D CAP31_08390 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D CAP31_08355 flagellar biosynthesis protein FlgH K02393 flgH; flagellar L-ring protein FlgH D CAP31_08235 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D CAP31_08200 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D CAP31_08230 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D CAP31_08385 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D CAP31_08380 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D CAP31_08375 flagellar biosynthesis protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D CAP31_08365 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D CAP31_08360 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D CAP31_08345 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D CAP31_08370 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D CAP31_08340 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D CAP31_08335 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D CAP31_08400 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D CAP31_07230 flagellin K02406 fliC; flagellin D CAP31_07220 flagellar hook protein K02407 fliD; flagellar hook-associated protein 2 D CAP31_07320 flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D CAP31_07325 flagellar protein FliT K02423 fliT; flagellar protein FliT D CAP31_08485 flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D CAP31_06955 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CAP31_06960 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D CAP31_08470 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CAP31_06965 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D CAP31_08465 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D CAP31_08395 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D CAP31_07225 hypothetical protein K06603 flaG; flagellar protein FlaG D CAP31_06945 flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D CAP31_06950 antiactivator of flagellar biosynthesis FleN protein K04562 flhG; flagellar biosynthesis protein FlhG D CAP31_02290 two-component system response regulator K02657 pilG; twitching motility two-component system response regulator PilG D CAP31_02285 two-component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D CAP31_02280 hypothetical protein K02659 pilI; twitching motility protein PilI D CAP31_02275 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D CAP31_02270 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D CAP31_11570 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D CAP31_11575 hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D CAP31_02425 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D CAP31_02420 type IV pili twitching motility protein PilT K02670 pilU; twitching motility protein PilU D CAP31_04365 pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA D CAP31_13340 secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D CAP31_01795 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D CAP31_13335 secretion system protein K02653 pilC; type IV pilus assembly protein PilC D CAP31_01790 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D CAP31_01785 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CAP31_10195 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D CAP31_02370 pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ D CAP31_02365 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D CAP31_02360 pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D CAP31_02355 fimbrial protein K02663 pilN; type IV pilus assembly protein PilN D CAP31_02350 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D CAP31_07960 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D CAP31_08170 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D CAP31_08175 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D CAP31_08180 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D CAP31_08185 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D CAP31_08160 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE D CAP31_03640 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D CAP31_03645 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D CAP31_03635 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D CAP31_03625 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D CAP31_03620 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D CAP31_03595 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D CAP31_03590 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:sulf04812] D CAP31_12390 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CAP31_02200 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CAP31_02195 cell division protein FtsA K03590 ftsA; cell division protein FtsA D CAP31_14460 chromosome partitioning protein K03496 parA; chromosome partitioning protein D CAP31_14695 peptide transporter K03496 parA; chromosome partitioning protein D CAP31_03155 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D CAP31_00440 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D CAP31_14450 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:sulf04147] D CAP31_10025 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D CAP31_09565 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CAP31_11695 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CAP31_00925 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CAP31_00920 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CAP31_09385 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D CAP31_00915 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CAP31_07030 alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D CAP31_12985 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAP31_07935 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CAP31_05800 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAP31_10305 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAP31_06525 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CAP31_12160 elongation factor Tu K02358 tuf; elongation factor Tu D CAP31_12225 elongation factor Tu K02358 tuf; elongation factor Tu D CAP31_05345 ATPase K01539 ATP1A; sodium/potassium-transporting ATPase subunit alpha [EC:7.2.2.13] D CAP31_05280 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CAP31_12695 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAP31_01225 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CAP31_10560 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CAP31_01290 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CAP31_03530 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CAP31_05235 cytochrome D ubiquinol oxidase subunit I K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D CAP31_13970 fructose-bisphosphatase class I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CAP31_10280 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CAP31_06905 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAP31_05935 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAP31_02335 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CAP31_10615 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CAP31_10755 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D CAP31_06315 pyruvate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_12995 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAP31_00245 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D CAP31_03400 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CAP31_02810 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:sulf02048] D CAP31_12610 subtype I-E CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D CAP31_12605 type I-E CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D CAP31_12650 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D CAP31_12645 type I-E CRISPR-associated protein Cse1/CasA K19123 casA; CRISPR system Cascade subunit CasA D CAP31_12640 type I-E CRISPR-associated protein Cse2/CasB K19046 casB; CRISPR system Cascade subunit CasB D CAP31_12635 type I-E CRISPR-associated protein Cas7/Cse4/CasC K19124 casC; CRISPR system Cascade subunit CasC D CAP31_12630 type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD D CAP31_12625 type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE D CAP31_08820 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D CAP31_08810 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D CAP31_01245 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D CAP31_08815 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D CAP31_01240 DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D CAP31_14710 SAM-dependent methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CAP31_08675 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CAP31_07730 nuclease K07448 mrr; restriction system protein D CAP31_04120 plasmid stabilization protein K06218 relE; mRNA interferase RelE/StbE D CAP31_01400 CopG family transcriptional regulator K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D CAP31_04115 antitoxin K18923 stbD; antitoxin StbD D CAP31_04100 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D CAP31_04105 antitoxin K19159 yefM; antitoxin YefM D CAP31_11335 toxin HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CAP31_11330 hypothetical protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D CAP31_14625 plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4 D CAP31_07800 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D CAP31_07795 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D CAP31_02200 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CAP31_12390 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CAP31_04865 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAP31_11500 hypothetical protein K19168 cptA; toxin CptA D CAP31_05740 hypothetical protein K09159 cptB; antitoxin CptB D CAP31_08720 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAP31_00105 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAP31_00190 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:sulf01504] D CAP31_05050 hypothetical protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CAP31_05045 DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D CAP31_11390 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CAP31_11385 multidrug efflux protein K18138 acrB; multidrug efflux pump D CAP31_05405 hypothetical protein K18302 mexJ; membrane fusion protein, multidrug efflux system D CAP31_08955 heavy metal-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D CAP31_02245 hypothetical protein K12340 tolC; outer membrane protein D CAP31_13755 hypothetical protein K12340 tolC; outer membrane protein D CAP31_05410 hypothetical protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:sulf03100] D CAP31_10140 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CAP31_11270 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CAP31_13605 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CAP31_13910 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CAP31_10115 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CAP31_13825 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CAP31_07620 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CAP31_08755 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CAP31_06260 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CAP31_08100 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CAP31_11225 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CAP31_02520 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CAP31_12265 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CAP31_11230 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CAP31_12830 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CAP31_12235 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CAP31_02515 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CAP31_10120 tRNA-His K14226 tRNA-His; tRNA His D CAP31_10145 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CAP31_13610 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CAP31_13915 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CAP31_02820 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CAP31_08540 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CAP31_08135 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CAP31_05690 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CAP31_02525 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CAP31_03960 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CAP31_13925 tRNA-Met K14230 tRNA-Met; tRNA Met D CAP31_00335 tRNA-Met K14230 tRNA-Met; tRNA Met D CAP31_04435 tRNA-Met K14230 tRNA-Met; tRNA Met D CAP31_00325 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CAP31_03340 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CAP31_09990 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CAP31_10110 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CAP31_07640 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CAP31_02565 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CAP31_08750 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CAP31_07545 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CAP31_12230 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CAP31_03240 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CAP31_03435 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CAP31_12220 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CAP31_12240 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CAP31_03295 tRNA-Val K14237 tRNA-Val; tRNA Val D CAP31_08105 tRNA-Val K14237 tRNA-Val; tRNA Val D CAP31_08570 tRNA-Val K14237 tRNA-Val; tRNA Val D CAP31_07095 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D CAP31_10150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CAP31_13920 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CAP31_13615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CAP31_10135 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CAP31_13905 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CAP31_10130 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CAP31_13565 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CAP31_13900 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CAP31_11715 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D CAP31_02090 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D CAP31_05650 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CAP31_12575 FAD-linked oxidase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3] D CAP31_00250 FAD-dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D CAP31_05850 hypothetical protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D CAP31_05855 hypothetical protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D CAP31_10690 cytochrome C K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D CAP31_08535 cytochrome C K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D CAP31_02920 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D CAP31_05435 peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D CAP31_00505 mononuclear molybdenum enzyme YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D CAP31_03230 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D CAP31_10700 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D CAP31_05205 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CAP31_11365 Ni/Fe hydrogenase subunit alpha K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2] D CAP31_11350 NADP oxidoreductase K18005 hoxF; [NiFe] hydrogenase diaphorase moiety large subunit [EC:1.12.1.2] D CAP31_11355 NADP oxidoreductase K18006 hoxU; [NiFe] hydrogenase diaphorase moiety small subunit [EC:1.12.1.2] D CAP31_11360 NADP oxidoreductase K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2] D CAP31_05725 quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D CAP31_04270 mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D CAP31_14525 mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D CAP31_08150 hypothetical protein K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1] D CAP31_05170 arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D CAP31_09135 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D CAP31_07445 low molecular weight phosphatase family protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D CAP31_14575 low molecular weight phosphatase family protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D CAP31_09015 low molecular weight phosphatase family protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D CAP31_13700 hypothetical protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D CAP31_05085 AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CAP31_03350 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D CAP31_02255 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D CAP31_05970 SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CAP31_06155 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D CAP31_01020 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CAP31_07600 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D CAP31_07595 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D CAP31_06170 glycosyl transferase family 1 K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D CAP31_11200 hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D CAP31_04235 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D CAP31_04905 bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D CAP31_03955 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CAP31_11140 GGDEF domain-containing protein K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D CAP31_10880 hypothetical protein K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D CAP31_13235 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D CAP31_07690 thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D CAP31_07510 phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D CAP31_10255 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D CAP31_12475 hypothetical protein K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D CAP31_05520 phosphodiesterase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D CAP31_01645 DNAase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CAP31_07955 DNAase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CAP31_01055 hypothetical protein K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D CAP31_00630 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CAP31_02725 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CAP31_04755 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D CAP31_04875 acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D CAP31_10250 hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25] D CAP31_08040 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D CAP31_06810 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D CAP31_11455 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D CAP31_01450 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D CAP31_11320 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D CAP31_11325 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D CAP31_01085 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D CAP31_06285 electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D CAP31_06290 electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D CAP31_06295 electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D CAP31_13420 ATPase P K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D CAP31_09380 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism D CAP31_09510 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC C 99982 Energy metabolism D CAP31_08860 ferredoxin K05524 fdxA; ferredoxin D CAP31_01520 ferredoxin K05524 fdxA; ferredoxin D CAP31_12965 ferredoxin K05524 fdxA; ferredoxin D CAP31_06280 electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D CAP31_06275 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D CAP31_06300 electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D CAP31_08715 Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D CAP31_00195 Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D CAP31_00795 hypothetical protein K15790 nifQ; nitrogen fixation protein NifQ D CAP31_06725 hypothetical protein K02448 norD; nitric oxide reductase NorD protein D CAP31_03170 VWA domain-containing protein K02448 norD; nitric oxide reductase NorD protein D CAP31_03455 hypothetical protein K02448 norD; nitric oxide reductase NorD protein D CAP31_04705 VWA domain-containing protein K02448 norD; nitric oxide reductase NorD protein D CAP31_03165 AAA family ATPase K04748 norQ; nitric oxide reductase NorQ protein D CAP31_04710 AAA family ATPase K04748 norQ; nitric oxide reductase NorQ protein D CAP31_06495 AAA family ATPase K04748 norQ; nitric oxide reductase NorQ protein D CAP31_03460 AAA family ATPase K04748 norQ; nitric oxide reductase NorQ protein D CAP31_00775 nitrogen fixation protein NifX K02596 nifX; nitrogen fixation protein NifX D CAP31_00100 putative nitrogen fixation protein NifT K02593 nifT; nitrogen fixation protein NifT D CAP31_00115 nitrogen fixation protein NifZ K02597 nifZ; nitrogen fixation protein NifZ D CAP31_00120 nitrogen fixation protein NifZ K02597 nifZ; nitrogen fixation protein NifZ D CAP31_00770 nitrogenase iron-molybdenum cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN D CAP31_00765 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D CAP31_00240 nitrogen fixation protein FixA K03521 fixA; electron transfer flavoprotein beta subunit D CAP31_00255 ferredoxin family protein K03855 fixX; ferredoxin like protein D CAP31_00235 nitrogen fixation protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein D CAP31_10240 hypothetical protein K09165 K09165; dodecin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D CAP31_07950 hypothetical protein K06203 cysZ; CysZ protein D CAP31_07665 glyoxalase K08234 yaeR; glyoxylase I family protein D CAP31_02430 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D CAP31_06555 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D CAP31_06560 lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B C 99987 Cofactor metabolism D CAP31_11730 ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D CAP31_09885 ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein D CAP31_11725 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D CAP31_13855 phosphoheptose isomerase K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D CAP31_09090 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D CAP31_09525 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D CAP31_09590 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) D CAP31_07650 FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D CAP31_13365 hypothetical protein K06999 K06999; phospholipase/carboxylesterase D CAP31_07240 GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D CAP31_05220 hypothetical protein K03623 yhcO; ribonuclease inhibitor D CAP31_09980 cold-shock protein K03704 cspA; cold shock protein D CAP31_10795 cold-shock protein K03704 cspA; cold shock protein D CAP31_06770 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D CAP31_13845 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D CAP31_04350 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D CAP31_04325 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D CAP31_10800 ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D CAP31_08130 trigger factor K03545 tig; trigger factor D CAP31_00500 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D CAP31_07120 formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D CAP31_06755 urease accessory protein UreE K03187 ureE; urease accessory protein D CAP31_06760 urease accessory protein UreF K03188 ureF; urease accessory protein D CAP31_06765 urease accessory protein UreG K03189 ureG; urease accessory protein D CAP31_06735 hypothetical protein K03190 ureD; urease accessory protein D CAP31_11965 hypothetical protein K03192 ureJ; urease accessory protein D CAP31_06505 SsrA-binding protein K03664 smpB; SsrA-binding protein D CAP31_11930 hydrogenase assembly protein HypC K04653 hypC; hydrogenase expression/formation protein HypC D CAP31_11915 hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D CAP31_11905 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D CAP31_11910 carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF D CAP31_13860 ATP-dependent protease K07391 comM; magnesium chelatase family protein D CAP31_13660 peroxiredoxin K07397 yhfA; putative redox protein D CAP31_02320 cytochrome C biogenesis protein K07399 resB; cytochrome c biogenesis protein C 99976 Replication and repair D CAP31_01005 hypothetical protein K03630 radC; DNA repair protein RadC D CAP31_04140 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D CAP31_01465 YraN family protein K07460 yraN; putative endonuclease D CAP31_00640 DNA protecting protein DprA K04096 smf; DNA processing protein D CAP31_05180 recombination factor protein RarA K07478 ycaJ; putative ATPase D CAP31_05495 hypothetical protein K07501 K07501; 3'-5' exonuclease D CAP31_09145 IS5/IS1182 family transposase K07481 K07481; transposase, IS5 family D CAP31_00720 hypothetical protein K07483 K07483; transposase D CAP31_08775 transposase K07483 K07483; transposase D CAP31_08785 transposase K07483 K07483; transposase D CAP31_09120 transposase K07483 K07483; transposase D CAP31_03080 hypothetical protein K07486 K07486; transposase D CAP31_03095 hypothetical protein K07486 K07486; transposase D CAP31_04110 transposase K07491 rayT; REP-associated tyrosine transposase D CAP31_03700 hypothetical protein K07497 K07497; putative transposase D CAP31_08770 IS3 family transposase K07497 K07497; putative transposase D CAP31_08790 IS3 family transposase K07497 K07497; putative transposase D CAP31_09115 IS3 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D CAP31_04405 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CAP31_11735 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family C 99978 Cell growth D CAP31_07520 septation protein A K06190 ispZ; intracellular septation protein D CAP31_07350 hypothetical protein K06320 cgeB; spore maturation protein CgeB D CAP31_10990 hypothetical protein K22719 envC; murein hydrolase activator C 99993 Cell motility D CAP31_11265 GTPase K24105 mglA; mutual gliding-motility protein MglA C 99995 Signaling proteins D CAP31_10180 translational GTPase TypA K06207 typA; GTP-binding protein D CAP31_11415 hypothetical protein K07168 K07168; CBS domain-containing membrane protein D CAP31_00895 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D CAP31_05210 ribonuclease K07175 phoH2; PhoH-like ATPase D CAP31_03550 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D CAP31_05185 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D CAP31_12275 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D CAP31_12320 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB D CAP31_02580 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB D CAP31_00695 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB D CAP31_04600 hypothetical protein K06142 hlpA; outer membrane protein D CAP31_03355 hypothetical protein K06194 nlpD; lipoprotein NlpD D CAP31_06455 OmpW family protein K07275 ompW; outer membrane protein D CAP31_10850 hypothetical protein K07285 slp; outer membrane lipoprotein D CAP31_04080 AsmA family protein K07290 yhjG; AsmA family protein D CAP31_13745 efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D CAP31_12505 secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein D CAP31_10200 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D CAP31_09055 hypothetical protein K02039 phoU; phosphate transport system protein D CAP31_12955 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D CAP31_09815 mdoG; glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D CAP31_09825 glucan biosynthesis protein D K03670 mdoG; periplasmic glucans biosynthesis protein D CAP31_09250 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein D CAP31_02080 Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D CAP31_00515 iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D CAP31_05025 hypothetical protein K07233 pcoB; copper resistance protein B B B 09194 Poorly characterized C 99996 General function prediction only D CAP31_03000 hypothetical protein K03558 cvpA; membrane protein required for colicin V production D CAP31_07280 cation transport regulator K06197 chaB; cation transport regulator D CAP31_06025 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein D CAP31_06240 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein D CAP31_09345 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein D CAP31_07590 hypothetical protein K06886 glbN; hemoglobin D CAP31_13200 group 1 truncated hemoglobin K06886 glbN; hemoglobin D CAP31_11985 globin K06886 glbN; hemoglobin D CAP31_11150 globin K06886 glbN; hemoglobin D CAP31_05535 esterase K07001 K07001; NTE family protein D CAP31_00200 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D CAP31_13635 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D CAP31_06190 hypothetical protein K07058 K07058; membrane protein D CAP31_09425 hypothetical protein K07058 K07058; membrane protein D CAP31_05075 phosphoribosyl transferase K07100 K07100; putative phosphoribosyl transferase D CAP31_14360 hypothetical protein K07113 fxsA; UPF0716 protein FxsA D CAP31_02730 sulfurtransferase K07146 K07146; UPF0176 protein D CAP31_05330 hypothetical protein K03744 lemA; LemA protein D CAP31_00645 hypothetical protein K03747 smg; Smg protein D CAP31_02995 hypothetical protein K03749 dedD; DedD protein D CAP31_05545 hypothetical protein K00389 yidH; putative membrane protein D CAP31_00150 hypothetical protein K08972 K08972; putative membrane protein D CAP31_04955 hypothetical protein K08982 K08982; putative membrane protein D CAP31_06980 hypothetical protein K08984 yjdF; putative membrane protein D CAP31_03280 hypothetical protein K09858 K09858; SEC-C motif domain protein D CAP31_03445 phosphate-starvation-inducible E K13256 psiE; protein PsiE D CAP31_09750 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D CAP31_05335 hypothetical protein K06872 K06872; uncharacterized protein D CAP31_06085 hypothetical protein K06884 K06884; uncharacterized protein D CAP31_04060 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein D CAP31_09745 dipeptidyl aminopeptidase K06889 K06889; uncharacterized protein D CAP31_09060 hypothetical protein K06938 K06938; uncharacterized protein D CAP31_13520 hypothetical protein K06938 K06938; uncharacterized protein D CAP31_01490 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D CAP31_13985 esterase K07000 K07000; uncharacterized protein D CAP31_05830 hypothetical protein K07003 K07003; uncharacterized protein D CAP31_00370 hypothetical protein K07003 K07003; uncharacterized protein D CAP31_00880 pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein D CAP31_14040 alpha/beta hydrolase K07018 K07018; uncharacterized protein D CAP31_10445 hydrolase K07019 K07019; uncharacterized protein D CAP31_11755 nucleotidyltransferase K07075 K07075; uncharacterized protein D CAP31_05160 hypothetical protein K07089 K07089; uncharacterized protein D CAP31_08885 hypothetical protein K07090 K07090; uncharacterized protein D CAP31_10475 permease K07090 K07090; uncharacterized protein D CAP31_02500 hypothetical protein K07090 K07090; uncharacterized protein D CAP31_12920 hypothetical protein K07090 K07090; uncharacterized protein D CAP31_01875 sulfur reduction protein DsrE K07092 K07092; uncharacterized protein D CAP31_06460 peroxiredoxin K07092 K07092; uncharacterized protein D CAP31_04860 peroxiredoxin K07092 K07092; uncharacterized protein D CAP31_05875 hypothetical protein K07112 K07112; uncharacterized protein D CAP31_05880 hypothetical protein K07112 K07112; uncharacterized protein D CAP31_10380 hypothetical protein K07112 K07112; uncharacterized protein D CAP31_05480 hypothetical protein K07126 K07126; uncharacterized protein D CAP31_01680 hypothetical protein K07126 K07126; uncharacterized protein D CAP31_03540 hypothetical protein K07126 K07126; uncharacterized protein D CAP31_00160 AAA family ATPase K07133 K07133; uncharacterized protein D CAP31_01275 hypothetical protein K07137 K07137; uncharacterized protein D CAP31_13210 hypothetical protein K07157 K07157; uncharacterized protein D CAP31_14485 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D CAP31_05865 hypothetical protein K09004 K09004; uncharacterized protein D CAP31_08975 hypothetical protein K09004 K09004; uncharacterized protein D CAP31_04980 hypothetical protein K09004 K09004; uncharacterized protein D CAP31_14015 hypothetical protein K09004 K09004; uncharacterized protein D CAP31_02710 hypothetical protein K09004 K09004; uncharacterized protein D CAP31_04420 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein D CAP31_03470 hypothetical protein K09131 K09131; uncharacterized protein D CAP31_10480 hypothetical protein K09137 K09137; uncharacterized protein D CAP31_12425 DUF493 domain-containing protein K09158 K09158; uncharacterized protein D CAP31_05440 ferritin K09700 K09700; uncharacterized protein D CAP31_11305 hypothetical protein K09703 K09703; uncharacterized protein D CAP31_10375 DUF188 domain-containing protein K09768 K09768; uncharacterized protein D CAP31_07525 hypothetical protein K09780 K09780; uncharacterized protein D CAP31_10550 tetraacyldisaccharide 4'-kinase K09791 K09791; uncharacterized protein D CAP31_12345 hypothetical protein K09792 K09792; uncharacterized protein D CAP31_06515 RnfH family protein K09801 K09801; uncharacterized protein D CAP31_06835 hypothetical protein K09803 K09803; uncharacterized protein D CAP31_11490 DUF2309 domain-containing protein K09822 K09822; uncharacterized protein D CAP31_01770 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D CAP31_14230 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein D CAP31_01195 hypothetical protein K09921 K09921; uncharacterized protein D CAP31_00570 hypothetical protein K09929 K09929; uncharacterized protein D CAP31_08945 hypothetical protein K09930 K09930; uncharacterized protein D CAP31_00565 hypothetical protein K09930 K09930; uncharacterized protein D CAP31_05770 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein D CAP31_01660 hypothetical protein K09941 K09941; uncharacterized protein D CAP31_00870 hypothetical protein K09958 K09958; uncharacterized protein D CAP31_04155 hypothetical protein K09966 K09966; uncharacterized protein D CAP31_06600 urea carboxylase K09967 K09967; uncharacterized protein D CAP31_06605 urea carboxylase K09967 K09967; uncharacterized protein D CAP31_04000 hypothetical protein K09977 K09977; uncharacterized protein D CAP31_09680 hypothetical protein K09983 K09983; uncharacterized protein D CAP31_07920 hypothetical protein K07276 K07276; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 10, 2024