Salmonella enterica subsp. enterica serovar Typhimurium D23580
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Selected pathways
Global Metabolism
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by Module
01100
Metabolic pathways
(853/5024)
01110
Biosynthesis of secondary metabolites
(322/2336)
01120
Microbial metabolism in diverse environments
(265/1460)
01200
Carbon metabolism
(101/387)
01210
2-Oxocarboxylic acid metabolism
(30/118)
01212
Fatty acid metabolism
(19/84)
01230
Biosynthesis of amino acids
(107/242)
01232
Nucleotide metabolism
(52/123)
01250
Biosynthesis of nucleotide sugars
(44/221)
01240
Biosynthesis of cofactors
(152/382)
01220
Degradation of aromatic compounds
(13/216)
01310
Nitrogen cycle
(8/39)
01320
Sulfur cycle
(10/52)
01100
Metabolic pathways
(104/522)
01110
Biosynthesis of secondary metabolites
(20/166)
01120
Microbial metabolism in diverse environments
(14/88)
01200
Carbon metabolism
(20/47)
01210
2-Oxocarboxylic acid metabolism
(6/14)
01212
Fatty acid metabolism
(4/9)
01230
Biosynthesis of amino acids
(22/38)
01232
Nucleotide metabolism
(5/7)
01250
Biosynthesis of nucleotide sugars
(13/65)
01240
Biosynthesis of cofactors
(22/60)
01220
Degradation of aromatic compounds
(1/21)
01310
Nitrogen cycle
(1/7)
01320
Sulfur cycle
(2/12)
Metabolism
Carbohydrate metabolism
00010
Glycolysis / Gluconeogenesis
(41/109)
00020
Citrate cycle (TCA cycle)
(28/70)
00030
Pentose phosphate pathway
(34/95)
00040
Pentose and glucuronate interconversions
(28/97)
00051
Fructose and mannose metabolism
(38/124)
00052
Galactose metabolism
(23/85)
00053
Ascorbate and aldarate metabolism
(14/63)
00500
Starch and sucrose metabolism
(31/109)
00620
Pyruvate metabolism
(53/141)
00630
Glyoxylate and dicarboxylate metabolism
(30/120)
00640
Propanoate metabolism
(35/104)
00650
Butanoate metabolism
(23/115)
00660
C5-Branched dibasic acid metabolism
(11/30)
00562
Inositol phosphate metabolism
(9/79)
00566
Sulfoquinovose metabolism
(7/50)
Energy metabolism
00190
Oxidative phosphorylation
(38/224)
00195
Photosynthesis
(7/63)
00710
Carbon fixation by Calvin cycle
(16/37)
00720
Other carbon fixation pathways
(33/126)
00680
Methane metabolism
(31/198)
00910
Nitrogen metabolism
(17/72)
00920
Sulfur metabolism
(31/132)
Lipid metabolism
00061
Fatty acid biosynthesis
(13/40)
00071
Fatty acid degradation
(12/60)
00074
Mycolic acid biosynthesis
(3/35)
00561
Glycerolipid metabolism
(9/101)
00564
Glycerophospholipid metabolism
(25/120)
00565
Ether lipid metabolism
(1/31)
00600
Sphingolipid metabolism
(3/58)
00590
Arachidonic acid metabolism
(1/51)
00591
Linoleic acid metabolism
(1/27)
00592
alpha-Linolenic acid metabolism
(2/34)
01040
Biosynthesis of unsaturated fatty acids
(3/32)
Nucleotide metabolism
00230
Purine metabolism
(66/230)
00240
Pyrimidine metabolism
(44/115)
Amino acid metabolism
00250
Alanine, aspartate and glutamate metabolism
(30/70)
00260
Glycine, serine and threonine metabolism
(31/110)
00270
Cysteine and methionine metabolism
(34/129)
00280
Valine, leucine and isoleucine degradation
(9/71)
00290
Valine, leucine and isoleucine biosynthesis
(13/19)
00300
Lysine biosynthesis
(13/48)
00310
Lysine degradation
(16/99)
00220
Arginine biosynthesis
(18/67)
00330
Arginine and proline metabolism
(22/115)
00340
Histidine metabolism
(13/50)
00350
Tyrosine metabolism
(20/85)
00360
Phenylalanine metabolism
(7/75)
00380
Tryptophan metabolism
(8/82)
00400
Phenylalanine, tyrosine and tryptophan biosynthesis
(19/74)
Metabolism of other amino acids
00410
beta-Alanine metabolism
(9/46)
00430
Taurine and hypotaurine metabolism
(3/29)
00440
Phosphonate and phosphinate metabolism
(3/47)
00450
Selenocompound metabolism
(14/36)
00460
Cyanoamino acid metabolism
(6/37)
00470
D-Amino acid metabolism
(15/56)
00480
Glutathione metabolism
(20/59)
Glycan biosynthesis and metabolism
00520
Amino sugar and nucleotide sugar metabolism
(39/119)
00541
Biosynthesis of various nucleotide sugars
(32/135)
00531
Glycosaminoglycan degradation
(1/15)
00603
Glycosphingolipid biosynthesis - globo and isoglobo series
(1/16)
00511
Other glycan degradation
(1/22)
00540
Lipopolysaccharide biosynthesis
(31/50)
00542
O-Antigen repeat unit biosynthesis
(1/35)
00550
Peptidoglycan biosynthesis
(23/55)
00552
Teichoic acid biosynthesis
(3/41)
00572
Arabinogalactan biosynthesis - Mycobacterium
(1/13)
00543
Exopolysaccharide biosynthesis
(13/73)
Metabolism of cofactors and vitamins
00730
Thiamine metabolism
(14/36)
00740
Riboflavin metabolism
(16/58)
00750
Vitamin B6 metabolism
(10/26)
00760
Nicotinate and nicotinamide metabolism
(23/100)
00770
Pantothenate and CoA biosynthesis
(21/47)
00780
Biotin metabolism
(13/24)
00785
Lipoic acid metabolism
(11/30)
00790
Folate biosynthesis
(23/84)
00670
One carbon pool by folate
(15/65)
00830
Retinol metabolism
(2/51)
00860
Porphyrin metabolism
(36/142)
00130
Ubiquinone and other terpenoid-quinone biosynthesis
(23/64)
Metabolism of terpenoids and polyketides
00900
Terpenoid backbone biosynthesis
(13/64)
00908
Zeatin biosynthesis
(1/10)
00907
Pinene, camphor and geraniol degradation
(4/26)
01051
Biosynthesis of ansamycins
(1/32)
00523
Polyketide sugar unit biosynthesis
(4/59)
01054
Nonribosomal peptide structures
(1/66)
01053
Biosynthesis of siderophore group nonribosomal peptides
(8/31)
01055
Biosynthesis of vancomycin group antibiotics
(1/29)
Biosynthesis of other secondary metabolites
00940
Phenylpropanoid biosynthesis
(1/31)
00946
Degradation of flavonoids
(1/22)
00950
Isoquinoline alkaloid biosynthesis
(2/63)
00960
Tropane, piperidine and pyridine alkaloid biosynthesis
(4/40)
00965
Betalain biosynthesis
(1/8)
00966
Glucosinolate biosynthesis
(2/21)
00332
Carbapenem biosynthesis
(2/21)
00261
Monobactam biosynthesis
(8/28)
00521
Streptomycin biosynthesis
(8/21)
00524
Neomycin, kanamycin and gentamicin biosynthesis
(1/58)
00525
Acarbose and validamycin biosynthesis
(2/27)
00401
Novobiocin biosynthesis
(4/30)
00405
Phenazine biosynthesis
(1/20)
00333
Prodigiosin biosynthesis
(3/21)
00975
Biosynthesis of various siderophores
(1/41)
00998
Biosynthesis of various antibiotics
(1/74)
00999
Biosynthesis of various plant secondary metabolites
(3/74)
Xenobiotics biodegradation and metabolism
00362
Benzoate degradation
(7/117)
00627
Aminobenzoate degradation
(5/97)
00364
Fluorobenzoate degradation
(1/18)
00625
Chloroalkane and chloroalkene degradation
(5/42)
00361
Chlorocyclohexane and chlorobenzene degradation
(2/41)
00623
Toluene degradation
(1/49)
00633
Nitrotoluene degradation
(5/23)
00642
Ethylbenzene degradation
(1/16)
00643
Styrene degradation
(2/25)
00930
Caprolactam degradation
(2/22)
00626
Naphthalene degradation
(4/28)
00984
Steroid degradation
(1/43)
00980
Metabolism of xenobiotics by cytochrome P450
(3/33)
00982
Drug metabolism - cytochrome P450
(3/24)
00983
Drug metabolism - other enzymes
(13/33)
Genetic Information Processing
Transcription
03020
RNA polymerase
(4/66)
Translation
03010
Ribosome
(56/206)
00970
Aminoacyl-tRNA biosynthesis
(45/66)
03008
Ribosome biogenesis in eukaryotes
(2/83)
Folding, sorting and degradation
03060
Protein export
(18/49)
04141
Protein processing in endoplasmic reticulum
04122
Sulfur relay system
03018
RNA degradation
(16/79)
Replication and repair
03030
DNA replication
(16/60)
03410
Base excision repair
(13/53)
03420
Nucleotide excision repair
(7/61)
03430
Mismatch repair
(21/44)
03440
Homologous recombination
(27/72)
Information processing in viruses
03258
Virion - Bacteriophage lambda
(19/21)
Environmental Information Processing
Membrane transport
02010
ABC transporters
(152/515)
02060
Phosphotransferase system (PTS)
(38/72)
03070
Bacterial secretion system
(33/74)
Signal transduction
02020
Two-component system
(170/542)
Cellular Processes
Cellular community - prokaryotes
02024
Quorum sensing
(55/283)
05111
Biofilm formation - Vibrio cholerae
02025
Biofilm formation - Pseudomonas aeruginosa
(19/90)
02026
Biofilm formation - Escherichia coli
(44/61)
Cell motility
02030
Bacterial chemotaxis
(21/26)
02040
Flagellar assembly
(44/55)
Human Diseases
Drug resistance: antimicrobial
01501
beta-Lactam resistance
(17/112)
01502
Vancomycin resistance
(6/22)
01503
Cationic antimicrobial peptide (CAMP) resistance
(34/54)