| Entry |
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| Name |
tRNA containing uridine at position 54;
tRNA UpsiC
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| Formula |
C9H13N2O9P(C5H8O6PR)n(C5H8O6PR)n
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| Structure |
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| Comment |
Generic compound in reaction hierarchy
uridine (U) at position 54, pseudouridine (psi) at position 55 and cytidine (C) at position 56
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| Reaction |
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| Enzyme |
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| Other DBs |
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| LinkDB |
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| KCF data |
ATOM 47
1 C1y C 18.3400 -23.3100
2 C1y C 19.7400 -23.3100
3 C1y C 20.1600 -21.9800
4 C1y C 19.0400 -21.1400
5 O2x O 17.9200 -21.9800
6 O2b O 20.7200 -24.2900
7 C1b C 17.1500 -24.0100
8 R R 18.3400 -19.9500
9 O2b O 15.7500 -24.0100
10 P1b P 14.3500 -24.0100
11 O1c O 14.3500 -25.4100
12 O1c O 14.3500 -22.6100
13 O1c O 12.9500 -24.0100
14 C1y C 27.6500 -23.5900
15 C1y C 29.0500 -23.5900
16 C1y C 29.4700 -22.2600
17 C1y C 28.3500 -21.4200
18 O2x O 27.2300 -22.2600
19 O2b O 29.8200 -24.4300
20 C1b C 26.4600 -24.2900
21 O2b O 25.0600 -24.2900
22 P1b P 23.6600 -24.2900
23 O1c O 23.6600 -25.6900
24 O1c O 23.6600 -22.8900
25 C1y C 36.3300 -23.7300
26 C1y C 37.7300 -23.7300
27 C1y C 38.1500 -22.4000
28 C1y C 37.0300 -21.5600
29 O2x O 35.9100 -22.4000
30 O1a O 38.7100 -24.7100
31 C1b C 35.1400 -24.4300
32 R R 36.3300 -20.3700
33 O2b O 33.7400 -24.4300
34 P1b P 32.3400 -24.4300
35 O1c O 32.3400 -25.8300
36 O1c O 32.3400 -23.0300
37 O1a O 21.1499 -20.9901
38 O1a O 30.4599 -21.2701
39 O1a O 39.1399 -21.4101
40 C8x C 26.5300 -17.7800
41 C8x C 26.5300 -19.1800
42 N4y N 27.7424 -19.8800
43 C8y C 28.9549 -19.1800
44 N4x N 28.9549 -17.7800
45 C8y C 27.7424 -17.0800
46 O5x O 30.1673 -19.8800
47 O5x O 27.7424 -15.6800
BOND 50
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 1 5 1
6 2 6 1 #Down
7 1 7 1 #Up
8 4 8 1 #Up
9 7 9 1
10 9 10 1
11 10 11 2
12 10 12 1
13 10 13 1
14 14 15 1
15 15 16 1
16 16 17 1
17 17 18 1
18 14 18 1
19 15 19 1 #Down
20 14 20 1 #Up
21 20 21 1
22 21 22 1
23 22 23 2
24 22 24 1
25 22 6 1
26 25 26 1
27 26 27 1
28 27 28 1
29 28 29 1
30 25 29 1
31 26 30 1 #Down
32 25 31 1 #Up
33 28 32 1 #Up
34 31 33 1
35 33 34 1
36 34 35 2
37 34 36 1
38 34 19 1
39 3 37 1 #Down
40 16 38 1 #Down
41 27 39 1 #Down
42 40 41 2
43 41 42 1
44 42 43 1
45 43 44 1
46 44 45 1
47 40 45 1
48 43 46 2
49 45 47 2
50 17 42 1 #Up
BRACKET 1 14.0000 -26.6700 14.0000 -19.3200
1 22.1200 -19.3200 22.1200 -26.6700
1 n
ORIGINAL 1 1 2 3 4 5 6 7 8 9 10 11 12 38
REPEAT 1
2 31.9900 -27.0900 31.9900 -19.7400
2 40.1100 -19.7400 40.1100 -27.0900
2 n
ORIGINAL 2 25 26 27 28 29 30 31 32 33 34 35 36 40
REPEAT 2
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