KEGG   DISEASE: Parkinson disease
Entry
H00057                      Disease                                
Name
Parkinson disease
Description
Parkinson disease (PD) is a progressive neurodegenerative movement disorder that results primarily from the death of dopaminergic (DA) neurons in the substantia nigra pars compacta (SNc). Both environmental factors and mutations in familial PD-linked genes such as SNCA, Parkin, DJ-1, PINK1 and LRRK2 are associated with PD pathogenesis. These pathogenic mutations and environmental factors are known to cause disease due to oxidative stress, intracellular Ca2+ homeostasis impairment, mitochondrial dysfunctions and altered protein handling compromising key roles of DA neuronal function and survival. The demise of DA neurons located in the SNc leads to a drop in the dopaminergic input to the striatum, which is hypothesized to impede movement by inducing hypo and hyper activity in striatal spiny projection neurons (SPNs) of the direct (dSPNs) and indirect (iSPNs) pathways in the basal ganglia, respectively.
Category
Neurodegenerative disease
Brite
Human diseases in ICD-11 classification [BR:br08403]
 08 Diseases of the nervous system
  Movement disorders
   8A00  Parkinsonism
    H00057  Parkinson disease
Pathway-based classification of diseases [BR:br08402]
 Amino acid metabolism
  nt06028  Dopamine and serotonin metabolism
   H00057  Parkinson disease
 Cellular process
  nt06534  Unfolded protein response
   H00057  Parkinson disease
  nt06536  Mitophagy
   H00057  Parkinson disease
  nt06535  Efferocytosis
   H00057  Parkinson disease
Disease
pathway
hsa05012  Parkinson disease
Pathway
hsa04137  Mitophagy - animal
Network
nt06028 Dopamine and serotonin metabolism
nt06463 Parkinson disease
nt06466 Pathways of neurodegeneration
nt06534 Unfolded protein response
nt06535 Efferocytosis
nt06536 Mitophagy
Gene
(PARK1/PARK4) SNCA (duplication, triplication) [HSA:6622] [KO:K04528]
(PARK2) PRKN [HSA:5071] [KO:K04556]
(PARK5) UCHL1 [HSA:7345] [KO:K05611]
(PARK6) PINK1 [HSA:65018] [KO:K05688]
(PARK7) PARK7 [HSA:11315] [KO:K05687]
(PARK8) LRRK2 [HSA:120892] [KO:K08844]
(PARK9) ATP13A2 [HSA:23400] [KO:K13526]
(PARK11) GIGYF2 [HSA:26058] [KO:K18730]
(PARK13) HTRA2 [HSA:27429] [KO:K08669]
(PARK14) PLA2G6 [HSA:8398] [KO:K16343]
(PARK15) FBXO7 [HSA:25793] [KO:K10293]
(PARK17) VPS35 [HSA:55737] [KO:K18468]
(PARK18) EIF4G1 [HSA:1981] [KO:K03260]
(PARK19) DNAJC6 [HSA:9829] [KO:K09526]
(PARK22) CHCHD2 [HSA:51142] [KO:K22758]
(PARK23) VPS13C [HSA:54832] [KO:K19525]
(PARK24) PSAP [HSA:5660] [KO:K12382]
(PARK25) PTPA [HSA:5524] [KO:K17605]
(IDLDP) NR4A2 [HSA:4929] [KO:K08558]
MAPT [HSA:4137] [KO:K04380]
Drug
Droxidopa [DR:D01277]
Bromocriptine mesylate [DR:D00780]
Apomorphine hydrochloride [DR:D02004]
Levodopa [DR:D00059]
Carbidopa hydrate and levodopa [DR:D00253]
Carbidopa, levodopa and entacapone [DR:D10293]
Amantadine hydrochloride [DR:D00777]
Ropinirole hydrochloride [DR:D00784]
Pramipexole dihydrochloride [DR:D00559]
Rotigotine [DR:D05768]
Selegiline hydrochloride [DR:D00785]
Rasagiline mesylate [DR:D02562]
Safinamide mesylate [DR:D10191]
Tolcapone [DR:D00786]
Entacapone [DR:D00781]
Opicapone [DR:D10825]
Istradefylline [DR:D04641]
Pimavanserin tartrate [DR:D08969]
Carbidopa [DR:D00558]
Comment
Disease class: synucleinopathy
Affected region: substantia nigra, putamen, caudate nucleus, hypothalamus
Microscopic lesion: Lewy bodies
Other DBs
ICD-11: 8A00.0
ICD-10: G20
MeSH: D010300
OMIM: 168600 168601 605543 600116 605909 606324 607060 606693 607688 610297 612953 260300 614203 614251 615528 616710 616840 619491 620482 619911 260540
Reference
  Authors
Hardy J, Lewis P, Revesz T, Lees A, Paisan-Ruiz C
  Title
The genetics of Parkinson's syndromes: a critical review.
  Journal
Curr Opin Genet Dev 19:254-65 (2009)
DOI:10.1016/j.gde.2009.03.008
Reference
PMID:17582365 (PARK2, PARK6, PARK8)
  Authors
Klein C, Lohmann-Hedrich K, Rogaeva E, Schlossmacher MG, Lang AE
  Title
Deciphering the role of heterozygous mutations in genes associated with parkinsonism.
  Journal
Lancet Neurol 6:652-62 (2007)
DOI:10.1016/S1474-4422(07)70174-6
Reference
PMID:17499497 (PARK2, PARK6, PARK7)
  Authors
Dodson MW, Guo M
  Title
Pink1, Parkin, DJ-1 and mitochondrial dysfunction in Parkinson's disease.
  Journal
Curr Opin Neurobiol 17:331-7 (2007)
DOI:10.1016/j.conb.2007.04.010
Reference
PMID:12953260 (PARK7)
  Authors
Abou-Sleiman PM, Healy DG, Quinn N, Lees AJ, Wood NW
  Title
The role of pathogenic DJ-1 mutations in Parkinson's disease.
  Journal
Ann Neurol 54:283-6 (2003)
DOI:10.1002/ana.10675
Reference
PMID:19182805 (PARK9)
  Authors
Gitler AD, Chesi A, Geddie ML, Strathearn KE, Hamamichi S, Hill KJ, Caldwell KA, Caldwell GA, Cooper AA, Rochet JC, Lindquist S
  Title
Alpha-synuclein is part of a diverse and highly conserved interaction network that includes PARK9 and manganese toxicity.
  Journal
Nat Genet 41:308-15 (2009)
DOI:10.1038/ng.300
Reference
PMID:19297401 (PARK1-15)
  Authors
Lesage S, Brice A
  Title
Parkinson's disease: from monogenic forms to genetic susceptibility factors.
  Journal
Hum Mol Genet 18:R48-59 (2009)
DOI:10.1093/hmg/ddp012
Reference
PMID:27090875 (PARK17, PARK18, PARK19)
  Authors
Hernandez DG, Reed X, Singleton AB
  Title
Genetics in Parkinson disease: Mendelian versus non-Mendelian inheritance.
  Journal
J Neurochem 139 Suppl 1:59-74 (2016)
DOI:10.1111/jnc.13593
Reference
PMID:25662902 (PARK22)
  Authors
Funayama M, Ohe K, Amo T, Furuya N, Yamaguchi J, Saiki S, Li Y, Ogaki K, Ando M, Yoshino H, Tomiyama H, Nishioka K, Hasegawa K, Saiki H, Satake W, Mogushi K, Sasaki R, Kokubo Y, Kuzuhara S, Toda T, Mizuno Y, Uchiyama Y, Ohno K, Hattori N
  Title
CHCHD2 mutations in autosomal dominant late-onset Parkinson's disease: a genome-wide linkage and sequencing study.
  Journal
Lancet Neurol 14:274-82 (2015)
DOI:10.1016/S1474-4422(14)70266-2
Reference
PMID:26942284 (PARK23)
  Authors
Lesage S, Drouet V, Majounie E, Deramecourt V, Jacoupy M, Nicolas A, Cormier-Dequaire F, Hassoun SM, Pujol C, Ciura S, Erpapazoglou Z, Usenko T, Maurage CA, Sahbatou M, Liebau S, Ding J, Bilgic B, Emre M, Erginel-Unaltuna N, Guven G, Tison F, Tranchant C, Vidailhet M, Corvol JC, Krack P, Leutenegger AL, Nalls MA, Hernandez DG, Heutink P, Gibbs JR, Hardy J, Wood NW, Gasser T, Durr A, Deleuze JF, Tazir M, Destee A, Lohmann E, Kabashi E, Singleton A, Corti O, Brice A
  Title
Loss of VPS13C Function in Autosomal-Recessive Parkinsonism Causes Mitochondrial Dysfunction and Increases PINK1/Parkin-Dependent Mitophagy.
  Journal
Am J Hum Genet 98:500-13 (2016)
DOI:10.1016/j.ajhg.2016.01.014
Reference
PMID:32201884 (PARK24)
  Authors
Oji Y, Hatano T, Ueno SI, Funayama M, Ishikawa KI, Okuzumi A, Noda S, Sato S, Satake W, Toda T, Li Y, Hino-Takai T, Kakuta S, Tsunemi T, Yoshino H, Nishioka K, Hattori T, Mizutani Y, Mutoh T, Yokochi F, Ichinose Y, Koh K, Shindo K, Takiyama Y, Hamaguchi T, Yamada M, Farrer MJ, Uchiyama Y, Akamatsu W, Wu YR, Matsuda J, Hattori N
  Title
Variants in saposin D domain of prosaposin gene linked to Parkinson's disease.
  Journal
Brain 143:1190-1205 (2020)
DOI:10.1093/brain/awaa064
Reference
PMID:36073231 (PARK25)
  Authors
Fevga C, Tesson C, Carreras Mascaro A, Courtin T, van Coller R, Sakka S, Ferraro F, Farhat N, Bardien S, Damak M, Carr J, Ferrien M, Boumeester V, Hundscheid J, Grillenzoni N, Kessissoglou IA, Kuipers DJS, Quadri M, Corvol JC, Mhiri C, Hassan BA, Breedveld GJ, Lesage S, Mandemakers W, Brice A, Bonifati V
  Title
PTPA variants and impaired PP2A activity in early-onset parkinsonism with intellectual disability.
  Journal
Brain 146:1496-1510 (2023)
DOI:10.1093/brain/awac326
Reference
PMID:31428396 (IDLDP)
  Authors
Ramos LLP, Monteiro FP, Sampaio LPB, Costa LA, Ribeiro MDO, Freitas EL, Kitajima JP, Kok F
  Title
Heterozygous loss of function of NR4A2 is associated with intellectual deficiency, rolandic epilepsy, and language impairment.
  Journal
Clin Case Rep 7:1582-1584 (2019)
DOI:10.1002/ccr3.2260
Reference
PMID:11220749 (MAPT)
  Authors
Pastor P, Pastor E, Carnero C, Vela R, Garcia T, Amer G, Tolosa E, Oliva R
  Title
Familial atypical progressive supranuclear palsy associated with homozigosity for the delN296 mutation in the tau gene.
  Journal
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KEGG   DISEASE: Neurodegeneration with brain iron accumulation
Entry
H00833                      Disease                                
Name
Neurodegeneration with brain iron accumulation
  Subgroup
Pantothenate kinase-associated neurodegeneration [DS:H02208]
Neuroferritinopathy [DS:H01779]
Aceruloplasminemia [DS:H02206]
Kufor-Rakeb syndrome [DS:H02207]
Description
Neurodegeneration with brain iron accumulation (NBIA) is a group of progressive extrapyramidal and cognitive disorders characterized by iron accumulation predominantly in the globus pallidus, as well as extensive axonal spheroids in various regions of the brain. The most frequent genetic form is the pantothenate kinase-2 associated neurodegeneration (PKAN) with a mutation in the pantothenate kinase 2 (PANK2) gene. Other forms are associated with a mutation in phospholipase A2 (PLA2G6), and FTL (neuroferritinopathy). A significant proportion of children with an NBIA phenotype have no genetic diagnosis and there are additional as yet undiscovered genes that account for a number of these cases.
Category
Nervous system disease
Brite
Human diseases in ICD-11 classification [BR:br08403]
 05 Endocrine, nutritional or metabolic diseases
  Metabolic disorders
   Disorders of metabolite absorption or transport
    5C64  Disorders of mineral absorption or transport
     H00833  Neurodegeneration with brain iron accumulation
Pathway-based classification of diseases [BR:br08402]
 Cellular process
  nt06532  Autophagy
   H00833  Neurodegeneration with brain iron accumulation
  nt06535  Efferocytosis
   H00833  Neurodegeneration with brain iron accumulation
  nt06525  Ferroptosis
   H00833  Neurodegeneration with brain iron accumulation
Pathway
hsa04140  Autophagy - animal
hsa00770  Pantothenate and CoA biosynthesis
hsa04978  Mineral absorption
hsa04216  Ferroptosis
Network
nt06525 Ferroptosis
nt06532 Autophagy
nt06535 Efferocytosis
Gene
(NBIA1) PANK2 [HSA:80025] [KO:K09680]
(NBIA2A, NBIA2B) PLA2G6 [HSA:8398] [KO:K16343]
(NBIA3) FTL [HSA:2512] [KO:K13625]
(NBIA4) C19orf12 [HSA:83636] [KO:K23168]
(NBIA5) WDR45 [HSA:11152] [KO:K22991]
(NBIA6) COASY [HSA:80347] [KO:K02318]
(NBIA7) REPS1 [HSA:85021] [KO:K20068]
(NBIA8) CRAT [HSA:1384] [KO:K00624]
(NBIA9) FTH1 [HSA:2495] [KO:K00522]
Other DBs
ICD-11: 5C64.10
ICD-10: G23.0
MeSH: D006211 D019150 C565699 C548080
OMIM: 234200 256600 610217 606159 614298 300894 615643 617916 617917 620669
Reference
  Authors
Friedman A, Arosio P, Finazzi D, Koziorowski D, Galazka-Friedman J
  Title
Ferritin as an important player in neurodegeneration.
  Journal
Parkinsonism Relat Disord 17:423-30 (2011)
DOI:10.1016/j.parkreldis.2011.03.016
Reference
  Authors
Kurian MA, McNeill A, Lin JP, Maher ER
  Title
Childhood disorders of neurodegeneration with brain iron accumulation (NBIA).
  Journal
Dev Med Child Neurol 53:394-404 (2011)
DOI:10.1111/j.1469-8749.2011.03955.x
Reference
  Authors
Kamate M, Mali R, Tonne V, Bubanale S
  Title
'Eye-of-the-tiger' sign and classic pantothenate kinase associated neurodegeneration.
  Journal
Indian J Pediatr 78:121-2 (2011)
DOI:10.1007/s12098-010-0234-7
Reference
PMID:11479594 (NBIA1)
  Authors
Zhou B, Westaway SK, Levinson B, Johnson MA, Gitschier J, Hayflick SJ
  Title
A novel pantothenate kinase gene (PANK2) is defective in Hallervorden-Spatz syndrome.
  Journal
Nat Genet 28:345-9 (2001)
DOI:10.1038/ng572
Reference
PMID:16783378 (NBIA2A/NBIA2B)
  Authors
Morgan NV, Westaway SK, Morton JE, Gregory A, Gissen P, Sonek S, Cangul H, Coryell J, Canham N, Nardocci N, Zorzi G, Pasha S, Rodriguez D, Desguerre I, Mubaidin A, Bertini E, Trembath RC, Simonati A, Schanen C, Johnson CA, Levinson B, Woods CG, Wilmot B, Kramer P, Gitschier J, Maher ER, Hayflick SJ
  Title
PLA2G6, encoding a phospholipase A2, is mutated in neurodegenerative disorders with high brain iron.
  Journal
Nat Genet 38:752-4 (2006)
DOI:10.1038/ng1826
Reference
PMID:15099026 (NBIA3)
  Authors
Vidal R, Ghetti B, Takao M, Brefel-Courbon C, Uro-Coste E, Glazier BS, Siani V, Benson MD, Calvas P, Miravalle L, Rascol O, Delisle MB
  Title
Intracellular ferritin accumulation in neural and extraneural tissue characterizes a neurodegenerative disease associated with a mutation in the ferritin light polypeptide gene.
  Journal
J Neuropathol Exp Neurol 63:363-80 (2004)
DOI:10.1093/jnen/63.4.363
Reference
PMID:23269600 (NBIA4)
  Authors
Hogarth P, Gregory A, Kruer MC, Sanford L, Wagoner W, Natowicz MR, Egel RT, Subramony SH, Goldman JG, Berry-Kravis E, Foulds NC, Hammans SR, Desguerre I, Rodriguez D, Wilson C, Diedrich A, Green S, Tran H, Reese L, Woltjer RL, Hayflick SJ
  Title
New NBIA subtype: genetic, clinical, pathologic, and radiographic features of MPAN.
  Journal
Neurology 80:268-75 (2013)
DOI:10.1212/WNL.0b013e31827e07be
Reference
PMID:23176820 (NBIA5)
  Authors
Haack TB, Hogarth P, Kruer MC, Gregory A, Wieland T, Schwarzmayr T, Graf E, Sanford L, Meyer E, Kara E, Cuno SM, Harik SI, Dandu VH, Nardocci N, Zorzi G, Dunaway T, Tarnopolsky M, Skinner S, Frucht S, Hanspal E, Schrander-Stumpel C, Heron D, Mignot C, Garavaglia B, Bhatia K, Hardy J, Strom TM, Boddaert N, Houlden HH, Kurian MA, Meitinger T, Prokisch H, Hayflick SJ
  Title
Exome sequencing reveals de novo WDR45 mutations causing a phenotypically distinct, X-linked dominant form of NBIA.
  Journal
Am J Hum Genet 91:1144-9 (2012)
DOI:10.1016/j.ajhg.2012.10.019
Reference
PMID:24360804 (NBIA6)
  Authors
Dusi S, Valletta L, Haack TB, Tsuchiya Y, Venco P, Pasqualato S, Goffrini P, Tigano M, Demchenko N, Wieland T, Schwarzmayr T, Strom TM, Invernizzi F, Garavaglia B, Gregory A, Sanford L, Hamada J, Bettencourt C, Houlden H, Chiapparini L, Zorzi G, Kurian MA, Nardocci N, Prokisch H, Hayflick S, Gout I, Tiranti V
  Title
Exome sequence reveals mutations in CoA synthase as a cause of neurodegeneration with brain iron accumulation.
  Journal
Am J Hum Genet 94:11-22 (2014)
DOI:10.1016/j.ajhg.2013.11.008
Reference
PMID:29395073 (NBIA7 NBIA8)
  Authors
Drecourt A, Babdor J, Dussiot M, Petit F, Goudin N, Garfa-Traore M, Habarou F, Bole-Feysot C, Nitschke P, Ottolenghi C, Metodiev MD, Serre V, Desguerre I, Boddaert N, Hermine O, Munnich A, Rotig A
  Title
Impaired Transferrin Receptor Palmitoylation and Recycling in Neurodegeneration with Brain Iron Accumulation.
  Journal
Am J Hum Genet 102:266-277 (2018)
DOI:10.1016/j.ajhg.2018.01.003
Reference
PMID:37660254 (NBIA9)
  Authors
Shieh JT, Tintos-Hernandez JA, Murali CN, Penon-Portmann M, Flores-Mendez M, Santana A, Bulos JA, Du K, Dupuis L, Damseh N, Mendoza-Londono R, Berera C, Lee JC, Phillips JJ, Alves CAPF, Dmochowski IJ, Ortiz-Gonzalez XR
  Title
Heterozygous Nonsense Variants in the Ferritin Heavy Chain Gene FTH1 Cause a Neuroferritinopathy.
  Journal
HGG Adv 4:100236 (2023)
DOI:10.1016/j.xhgg.2023.100236
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