Acididesulfobacillus acetoxydans: DEACI_3222
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Entry
DEACI_3222 CDS
T07960
Name
(GenBank) DNA-directed DNA polymerase
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
aacx
Acididesulfobacillus acetoxydans
Pathway
aacx03030
DNA replication
aacx03430
Mismatch repair
aacx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aacx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DEACI_3222
03430 Mismatch repair
DEACI_3222
03440 Homologous recombination
DEACI_3222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aacx03032
]
DEACI_3222
03400 DNA repair and recombination proteins [BR:
aacx03400
]
DEACI_3222
Enzymes [BR:
aacx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DEACI_3222
DNA replication proteins [BR:
aacx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DEACI_3222
DNA repair and recombination proteins [BR:
aacx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DEACI_3222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
DNA_pol3_a_NII
HHH_3
T2SSK
DNA_pol3_a_NI
Motif
Other DBs
NCBI-ProteinID:
CAA7602543
UniProt:
A0A8S0VY32
LinkDB
All DBs
Position
1:complement(3479489..3483169)
Genome browser
AA seq
1226 aa
AA seq
DB search
MARLMPLAEVPLLSRFMPTWRERLGPVLDLLALKRVEVYPEKKKWIFHLYSPCEVDECSL
GPLREVLEGNAPGIGMEWHLECPEGDQALAQICSRNWPRIVRELGESFPAMKGWLGSGYE
IRGETLVLPAPNALGVEYFQLKQAQVEEYFFDTFGIRLRIRCEYDPGRQEPDYDRLTEQA
EKECLERLMAPAPEKKAPPRSDCILGKEIEEEPVPLRSIVDEERRVVLTGRVFALEQRQL
KSGRKLTTFNLTDRTDSMSAKVFGGEKAAPLDLRDGEWIKAGGPVQFDRFSGELTFMPKD
MVRVSPMVRVDQAAEKRVELHLHTRMSAMDGISSAEDLIRRAGLWGHAALAITDHGVVQA
FPEAVEAGKKYGVKIILGVEGYLIDDISEPSTPPQQMKSRHMVLLVRDAVGLKNLYKLIT
CSHLEYFHRRPRIPKSVLARHRTGLIIGSACEAGELVQAILKQEPWEKLLEVASFYDYLE
IQPRGNNAFMLRSGLVRNEEGLRELNRTVLRLGRALNKPVAATGDVHFLDPEDEAYRRIL
MAGKGFEDADDQAPLYFRTTEEMLEEFSYLGETEAFEVVVRAPQHLAAQVEVLKPFPDDL
FSPTIPGAEEKIESMSWQRARELYGRDLPDVVRKRLEKELNAIIGHGFSVLYLIAHLLVK
KSNEDGYLVGSRGSVGSSLVATLTGITEVNPLPPHYRCLNPECLHSIWVEDGSAGSGVDL
ADKDCPRCGGKMAKDGHDIPFETFLGFKGDKVPDIDLNFSGDYQPKAHKFTEELFGRDNV
FRAGTIATIADKTAYGYVKNYLEERQVKVRSAEMARLVEGCTGVKRTTGQHPGGLMVVPK
ECDVFDFTPLQRPADDPKSETVTTHFDYHSISGRLVKLDILGHDDPTVIKMLEDLTGVNA
KTIPLDDPKTLSLFWQPDALGVSAEEICSNTGTYGIPEFGTKFVRQMLEDTRPQSFSDLV
RISGLSHGTDVWLGNAQDLVRSGTATISEIIACRDDIMVYLIYRGLEPGRAFKIMEGVRK
GKGLKAEDIEEMRQHQVPEWYIKSCQKIKYMFPKAHAVAYVTMAFRIAWFKVYYPQAFYA
TFFTVRADEFDLELILRGKDACRAKIKEIEGRGNEATAKEKNLVTILELVVEMYSRGVCV
RPVDLWESDATRFKVTPTGLLPPFAAIQGMGSSAAQNVVRLRDTQGILSVEELHSLAKLS
AAVIEVLGQMGCLKGLPEENQLSLFS
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggctaggctgatgccgctggcggaggtcccgctcctctcccgctttatgcccacttgg
cgggagaggctggggcccgtcctggacttgctggcgttgaaacgggtggaggtataccct
gagaagaaaaagtggattttccatctttattcaccctgcgaagttgacgaatgctcatta
gggcccctgagagaggtcttggaggggaacgcaccggggattgggatggaatggcatttg
gagtgtcccgaaggagatcaggcgttggcccagatttgcagccggaactggccgcggatc
gtgcgtgagttgggagaaagttttccggcgatgaagggttggctgggttcgggctatgaa
attcggggggagacactggtcttgcctgcgcccaacgctttgggtgtggaatattttcaa
ttgaagcaagcccaagtggaagagtatttctttgacacttttgggattcggctccgaatt
cggtgtgaatacgacccggggcggcaagagcctgattatgaccggttaacagagcaggcg
gaaaaggaatgccttgaacggttaatggcgcctgctcctgaaaagaaagcaccccccagg
tcggactgcattctgggtaaagagattgaagaggaacctgtcccgctgaggagcattgtg
gatgaggaacgccgagttgtgttgacaggacgggtatttgcgctggagcagcggcaattg
aaaagcgggcgcaaactgacgacgtttaatctgacggacaggacggattccatgtcggcc
aaggtgtttggcggtgaaaaagccgcgcctctggatttgcgggacggtgaatggatcaaa
gccggcggcccggttcagtttgaccgtttttccggcgaactgaccttcatgcccaaggat
atggtcagagtgtcccccatggtgagggtcgatcaagccgcggaaaaacgggtggagctt
catttgcatacccggatgtccgccatggacggtatctcttcggcagaagacctcatccgc
cgggcgggtctctggggacatgccgcgctggctattacggaccatggtgtggttcaggcc
tttccggaagcagtggaggccgggaaaaaatacggagtgaaaataatcctgggagtggag
ggttatctcattgatgacatctccgaaccgagtactccaccccagcagatgaagagccgc
cacatggtgctcttggtgcgtgatgcagtcggactcaagaacctgtacaagctcatcacg
tgttctcacctggagtattttcatcgccgcccgcgcattcccaaatcagtgctggcccgg
catcgcaccggtctcattatcggttccgcctgtgaggccggagaactggttcaggccatt
ctcaagcaggaaccttgggaaaaacttctcgaggtggcttctttttatgattatttagag
attcagccgcgcgggaacaacgccttcatgttgcgcagcggtctcgtccggaatgaagaa
gggttgcgggaactcaaccgtacggtcctgcgtctgggcagggctctgaacaagccggtg
gcggctacaggtgatgtccatttccttgacccggaagacgaggcgtatcgccggatcctg
atggccggcaagggttttgaggatgcggatgatcaagctcctctgtactttcggacgacc
gaagaaatgctggaggaattttcttatctcggcgagacggaggctttcgaggtcgtggtt
agagcaccgcaacacttggccgcccaggtagaagtcctgaagccgtttcccgatgacctc
ttttcgccgacgattcccggagcggaggaaaaaatagaatctatgtcctggcagagggcg
cgtgagttatatggcagggatttgccggatgtggtgcgaaaacgcctggagaaggaactg
aacgccattattgggcatgggttttctgtgctctatctgattgctcatcttctggtgaag
aaatccaatgaggatggctatttggtcggttcaagagggtcggtgggttcttccttggtg
gcgaccctgaccggaataacagaggtgaatccccttcccccccactatcgttgtcttaat
ccagagtgtcttcattccatctgggttgaggacgggagtgccggttcgggtgtggatttg
gcggataaggattgtccgcgttgcggggggaagatggctaaagacgggcacgatattcct
tttgagacttttttgggttttaagggggataaggttccggacatcgatttgaatttttcc
ggtgattaccagcccaaggcgcacaaattcacggaagagctctttggccgggataatgtc
ttccgcgccgggaccattgcgacgatagcggataaaacggcttacggctatgtcaagaat
tacctggaagagcgccaagtgaaggtccgctccgcagaaatggcgcggctggtggaaggc
tgcaccggggtgaagcggacgacggggcagcaccccggaggcttgatggtcgtacccaaa
gaatgtgatgtttttgactttacccccttgcagaggccggccgatgatccgaaatcggag
accgtgacgactcacttcgattaccattcgatctcgggccgcctggtgaaacttgatatt
ctggggcacgacgatccgactgtgatcaaaatgctggaggacttgacgggggtgaacgcc
aaaacgattcccctggacgatcccaagactctctccttgttttggcagcccgatgctctg
ggggtgagcgccgaggagatttgctccaatacggggacctacggtatcccggaattcgga
accaagtttgtacggcagatgcttgaagatacgcggccccagagcttttcggacctggtc
aggatttcggggctttcccatggcacggatgtctggctggggaatgcccaggatcttgtc
cgctccggaacggcgacgatctccgaaatcatcgcctgccgcgatgacattatggtatat
ctcatttaccgggggttggagccgggacgggcctttaagattatggagggggttcgcaaa
gggaaaggactcaaggcggaagacatagaagagatgaggcagcaccaggttccggagtgg
tatatcaaatcctgccaaaaaatcaagtatatgtttccgaaggcccatgccgtagcctat
gttaccatggcttttcgcattgcttggtttaaggtgtattatcctcaggccttctacgcg
actttttttacggttcgtgccgacgagttcgatcttgagctcatactgaggggtaaggac
gcctgccgggcgaaaattaaggaaatcgagggcagagggaacgaagccacggccaaggag
aagaacttagtgacaattttagaattggtggtggaaatgtatagcagaggggtgtgcgtg
aggccggtggatttatgggaatcggacgcaacccgctttaaagtgacacctaccggcttg
ctccctccgttcgcggccattcagggcatgggaagctcggccgctcagaatgtagtgcgg
ctgcgtgatacacaaggcattctttctgtcgaggaattgcattcactggccaaactatct
gcggcggtcattgaggttttaggccaaatgggctgtttgaagggcctgccggaggagaac
cagctgagtttgttctcttaa
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