Achromobacter aegrifaciens: RA224_24195
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Entry
RA224_24195 CDS
T09343
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
aaeg
Achromobacter aegrifaciens
Pathway
aaeg00540
Lipopolysaccharide biosynthesis
aaeg01100
Metabolic pathways
aaeg01250
Biosynthesis of nucleotide sugars
Module
aaeg_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RA224_24195 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
aaeg01005
]
RA224_24195 (rfaD)
Enzymes [BR:
aaeg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
RA224_24195 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
aaeg01005
]
Core region
RA224_24195 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
WLW60303
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Position
complement(5176448..5177437)
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AA seq
329 aa
AA seq
DB search
MIVVTGAAGFIGSNLVRGLNRRGIKDIIAVDDLTEGDKFVNLVDCQIADYMDKDDFRRRV
LDGSLHEVRAVLHQGACSDTTERNGRYMLDNNYRVTLELFEFCQERRIPFLYASSAAVYG
GSSIYVEDPANEGPLNVYGYSKLLFDQVLRQRMDSLTAQVVGLRYFNVYGPHEQHKGRMA
SVAFHNMNQFLEHGHVRLFAGWDGYVDGGQSRDFISVEDVVAVNLHFLDHPEQSGIFNCG
TGRAQPFNDVAAGVVNALRAERGEAELTLAQLVELDLIRYIPFPDDLKGRYQSYTQADVT
RLRAAGFQAPMRDVRTGVTEYVRYWRARK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgttaccggagccgcgggcttcataggcagcaacctggtgcgcgggctcaac
cgccgcggcatcaaggacatcatcgcggtcgatgacctgaccgaaggcgacaagttcgtc
aacctggtcgattgccagatcgcggactacatggacaaggacgacttccgccgccgcgtc
ctcgacggcagcctgcacgaagtgcgcgccgtgctgcaccagggcgcgtgctcggacacg
accgagcgcaacggccgctacatgctcgacaacaactaccgcgtcacgctggagctgttc
gagttctgccaggagcgccgcattccgttcctgtacgcctcgtcggcggcggtctacggc
ggttcctcgatctacgtggaagaccctgccaatgaaggcccgctcaacgtctacggctat
tccaagctgctgttcgatcaggtcctgcgccagcgcatggacagcctgaccgcacaggtc
gtgggcctgcgctacttcaacgtctacggtccgcacgaacagcacaagggccgcatggcc
tcggtggcgttccacaacatgaaccagttcctggagcatgggcatgtgcgcctgttcgcg
ggctgggacggctacgtggatggcggccagagccgcgacttcatttccgtcgaagacgtg
gtcgcggtcaacctgcatttcctggatcaccccgagcagtccggaatcttcaactgcggc
accggccgcgcgcagcccttcaacgatgtggcggccggcgtggtcaatgcgctgcgcgcg
gagcgcggcgaagccgagctgacgctggcgcaactggtggaactggatctgatccgctat
atcccgttcccggacgacctgaaagggcgctatcagagctacacgcaggccgacgtcacg
cgcctgcgcgcggcagggttccaggcgccgatgcgcgatgtgcggaccggcgttaccgag
tacgtgcgttattggcgcgcccgcaagtaa
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