Achromobacter aegrifaciens: RA224_28305
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Entry
RA224_28305 CDS
T09343
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
aaeg
Achromobacter aegrifaciens
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaeg03016
]
RA224_28305 (mnmC)
Enzymes [BR:
aaeg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
RA224_28305 (mnmC)
Transfer RNA biogenesis [BR:
aaeg03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RA224_28305 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
3HCDH_N
NAD_binding_8
NAD_binding_9
Pyr_redox
Pyr_redox_2
TrkA_N
Sacchrp_dh_NADP
FAD_binding_3
MurD-like_N
Epimerase
XdhC_C
Lycopene_cycl
HcgC
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
WLW61092
LinkDB
All DBs
Position
complement(6068212..6070083)
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AA seq
623 aa
AA seq
DB search
MSFSYAPLIPAKAEFDADGRLYSPAYGDVYHSPSGALGQAEHVFLRGNGLPERWRGRRAF
TVCETGFGLGLNFLALWKAWRDDPQRSAALHVVSLEAHPFEREDLAALLARYAPEPLAGL
GRQLAAGWPVLLPGLHRLEFEGGAVTLTLGLGDAQVLASRLSVGVDAFFLDGFAPERNPR
MWELPLLHNLARLAAPGATLATWACTGELRQALRTAGFEARRAPGYGGKWHMTVATAVAA
GSAAQGGPDGVSRHAVVVGAGLAGSGIAQALAARGWRVTVIDAGRAQGAAAHAGHVAAAL
TPVVARDDNARARLSRAGSLRALARWQGLPAGAAPLVCGTVQLERDEGRSAALAGTLETL
AFPEHWVRQVSRDEASALAGLPLARGGVYFGQGMLLRPDLLIEALLATDGVTLLPGTAAR
VERIGAGWSVRDVAGAELACADAVILANAFGARAVLADSGLLDPLPRVGQMHALAGEVTL
VPAQALGGGPRCIVGGEGYLLPDVGSGCVAGSTYVHGASEARIGAEGQRVTLGKAAGLLG
GGFPDFESLEPGSLPGWAGWRAVLPGRLPAVGELPHAPGLWLAVGYASRGLSWSALMGDL
IAARLAGEPSPLETDLAQLISPR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttcctatgctcccctcatccccgccaaggctgaattcgatgctgacggccgg
ctctatagtccggcttatggcgacgtctaccattcgccgtcgggcgcgctggggcaggcg
gaacacgtgttcctgcggggcaacggcctgcctgagcgttggcgcgggcgccgcgcgttc
accgtctgcgaaacgggcttcggcctggggctgaatttcctggccctctggaaagcatgg
cgcgacgatccgcagcgcagcgccgcgctgcacgtggtgtcgctggaagcgcatcccttt
gaacgcgaagaccttgctgctctgttggcgcgttatgcccccgagcccttggccggcctg
gggcggcaattggcggcgggatggccggtcttgttgcccggactgcatcgcctggagttc
gagggcggcgcagtcacgctgaccctgggcttgggcgatgcgcaggttctggcgtcccgc
ctgagcgtcggtgtggacgcattcttcctggacggtttcgcgcccgaacgcaatccgcgc
atgtgggagctacctttgctgcacaacctggccaggctggcggcgccgggcgccacgctg
gccacctgggcctgcaccggcgaactgcgccaggccttgcggacggcgggtttcgaggcg
cggcgcgcgcctggctacggcggcaaatggcatatgacggtggcgaccgccgttgcggct
ggcagcgcagcgcagggcggcccggacggggtgtcccgccacgccgtggtggtgggagcg
gggctggcgggttcgggcattgcccaggcgctggccgcgcgcggatggcgcgtgaccgtg
atagacgcgggccgggcgcagggcgcggcggcgcatgcaggccatgtcgccgcggccttg
acgccagtagtggcgcgcgatgacaacgcgcgggcgcgcctgtcgcgcgccggcagcctg
cgggcgctggcgcgctggcagggtttgccggcaggcgcggcgcccctggtttgcggcacg
gtccagctggagcgcgacgaaggccggtccgcggccttggccggcaccttggagaccctg
gcttttcccgaacactgggtacgccaggtcagccgcgacgaagccagcgccttggccggc
ctgccgctggcgcgcggcggcgtgtatttcggacagggcatgctgctgcggcctgacctg
ctgatagaagccctgctggcgacggacggcgtgactctcttgcccggcacggctgccagg
gtcgagcgcatcggcgcgggctggagcgtgcgtgatgttgccggcgccgaactggcgtgc
gccgatgccgtcattctggccaatgcgttcggcgcgcgcgccgtgctggccgatagtggg
ctgctggatcccttgccgcgcgtgggccagatgcacgcgctggcgggcgaggtcacgctg
gtgcccgcgcaggcgctgggcggcggcccccgctgcatcgtcggaggcgagggctatctg
ctgcccgatgtgggctcgggctgcgtggccggcagcacctacgtgcatggcgcgtccgaa
gcgcggatcggcgccgagggccagcgtgtcaccctgggcaaggcggctggcctgctgggc
ggcggcttccccgacttcgaatccctggaacccggcagcctgccgggctgggccggttgg
cgggccgtgctgccagggcgcttgccggcggtaggagaactgcctcacgctccgggcctg
tggctggccgtcggttatgcgtcgcggggcttgtcgtggtcggcgctcatgggcgacctg
atcgccgcgcgtctggcgggggagccgtcccccttggaaacggacctggcgcaacttatt
tcgccacgatga
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