Aureococcus anophagefferens: AURANDRAFT_35850 Help Entry AURANDRAFT_35850  CDS       T04134                                  Name (RefSeq) hypothetical protein   KO K03018   DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] Organism aaf  Aureococcus anophagefferens Pathway aaf03020   RNA polymerase Brite KEGG Orthology (KO) [BR:aaf00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     AURANDRAFT_35850  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:aaf03021]     AURANDRAFT_35850 Enzymes [BR:aaf01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      AURANDRAFT_35850 Transcription machinery [BR:aaf03021]  Eukaryotic type   RNA polymerase III system    RNA polymerase III     Core subunits      AURANDRAFT_35850 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Motif Other DBs NCBI-GeneID:  20221676 NCBI-ProteinID:  XP_009032709 JGI:  Auran1_35850 UniProt:  F0XVN3 LinkDB All DBs Position Unknown AA seq 1398 aa AA seqDB search MESLAEFECNNRELYTLPSRKPAPNGCLDLRLGAANKQTACATCHKRVDQCAGHFGVVRL ELPVFHVGYFKHVLTILQCVCKECSRALVHPQERTTLLRRMRDPRADALRKQALYKRVVD RCKAASKCPYCGARNGPVRKVAGAGALKLSHEKWRGVKREDLLDDDEFSAYAESLESALG AVPTSATATKAPPTVLSPVDVRAILEKISDDDCDLLWIDPRVGRPENLVLKTLLVPPTPI RPSVAVDSPGGGGSNEDDLTIKLQEIIDVNSALRQAIRKGGSMKMIVEGWNFLQVQVALY LNGEVPGLQPRNAPAAKPIRGLCQRLKGKSGRFRGNLSGKRVDFSARTVISPDPNLRVDQ VGVPQEVAKIMTYPEKVNALNLEKLQKLVVAGQKQWPGANYVEIANHDDPGAGDRPPFKK SLLYGDRARIAKELRVGDVVERHMQDGDVVLFNRQPSLHKLSIMSHEVKVMPWRTFRFNE CVCAPYNADFDGDEMNMHLPQTEEARAEASALMNVATNICTPRNGEPLVAATQDFVTASF LVTQRDVFFDRDAFCALAAYVGDALERVDVPPPAILKPVRLWTGKQLFSLIVRPTVAAKP ENGGAWPCVSFECAERNYTGSGIETMCPMDGYVLFRRSSLLCGNIAKKTVGDGSKKGLVY ELYREHGPAAAATFMNRLAKLSARYLGYHKGFSIGIDDVTPSDAVLALKAQLLEEGHAEA RRKIEAYESGSLALQPGCDALQSLEAELTGLLGKVREQAGKNLMTRDLPRSNSPRIMAEC GSKGSAINVSQMIACLGQQAVDGKRIQNGFVQRTLPHFEVGELSPGARGFVANSFYSGLT ATEFFFHTMGGREGLVDTAVKTAQTGYMARRLMKALEDLSVGYDGTVRNSEKNIVQFTYG DDGLDPVKMETGDSMPVDFGRLLHRVRHDDAALSSRAPRDLDAAAVAAVAEACGAGDAGP FGRLGPLAAKFRGDAAGFLRDLSERMADRELQMKDHCGDAALARLFDDVALSQGDLDRFQ AGALDKYTRGVVEPGEAVGAIGAQCISEPGTQMTLKTFHFAGVASMNVTLGVPRLTEIIN ASKNISTPIITAHLDNPSSTTAARVVKARLEKTTLGEICKSMKEVYGPRSCYVSVELDAT LIADLHLDVDAAAARKRVLQAVMASGRAPPVIRALKNEHVLLNPNHRNRDMLSDDRTYFA MQALKSALPSIVVGGVSSINRAVVNEDEGSSPATYHLLVEGYGLADVMGTPGVDGRRTTT NHVAEIEAVLGIEAARSTIANEITYIMSAYGIGIDARHLMLLSDVMTFKGVVLGITRFGV SKMRESVLMLASFERTTDHLFDAAAHGRRDNIVGVSECIIMGIPIPLGCGSFKLLRDTDA EQGDDDGAPKRRPLIMAS NT seq 4197 nt NT seq  +upstreamnt  +downstreamnt atggagagcctcgcggagttcgagtgcaacaaccgcgagctctacacgctgccgagccgc aagcccgcgccgaacggctgcctcgacctccggctcggagcggcgaacaagcagaccgcg tgcgcgacgtgccacaagcgggtcgaccagtgcgcgggccacttcggcgtcgtccgcctc gagctgcccgtgttccacgtcggctacttcaagcacgtgctcacgatcctgcagtgcgtc tgcaaggagtgctcgcgggccctcgtgcacccccaggagcggacgacgctcctgcggcgc atgcgggacccgcgcgcggacgcgctccgaaaacaggcgctctacaagcgcgtcgtcgac cgctgcaaggccgcgtccaagtgcccctactgcggcgcgcgcaacggccccgtgcgcaag gtcgccggggccggggccctgaagctgtcccacgagaagtggcgcggcgtgaagcgcgag gacctgctcgacgacgacgagttctcggcgtacgcggagtcgttggagtcggcgctcggc gccgtgccgacgtcggcgacggcgacgaaggcgccgccgacggtgctgtcgccggtggac gtccgcgcgatcctcgagaagatcagcgacgacgactgcgacctgctctggatcgacccg cgcgtgggccggccggagaatttggtcctcaagacgctcctcgtcccgccgacgcccatc cggccgagcgtcgccgtcgactcgcccggcggcggcggcagcaacgaggacgacctcacg atcaagctccaggagatcatcgacgtcaacagcgcgctgcgccaggccatccgcaagggc gggtccatgaagatgatcgtcgagggctggaacttcctccaggtccaggtcgcgctctac ctcaacggcgaggtgccgggcctccagccgcggaacgcgcccgcggcgaagccgatccgc ggcctctgccagcgcctcaagggcaagagcggccgcttccggggcaacctgagcggcaag cgcgtcgacttctccgcgcgcacggtcatctcgccggacccgaacttgcgcgtggaccag gtcggcgtgccgcaggaggtcgcgaagatcatgacgtacccggagaaggtgaacgcgctg aacctggagaagctccagaagctcgtcgtcgccggccagaagcagtggcccggcgccaac tacgtcgagatcgcgaaccacgacgacccgggcgccggcgaccggccgcccttcaagaag agcctgctctacggcgaccgcgcgcgcatcgccaaggagctccgcgtcggcgacgtcgtc gagcgccacatgcaggacggcgacgtcgtcctcttcaaccgccagccctcgctccacaag ctctccatcatgtcccacgaggtcaaggtcatgccctggcgcacgttccgcttcaacgag tgcgtctgcgcgccgtacaacgccgacttcgacggcgacgagatgaacatgcacctgccg cagaccgaggaggcgcgcgccgaggcgtcggcgctcatgaacgtggcgacgaacatctgc acgccgcgcaacggcgagccgttggtggccgcgacgcaggacttcgtgaccgcgtcgttc ctcgtgacgcagcgcgacgtcttcttcgaccgcgacgccttctgcgctctggcggcctac gtgggcgacgctttagagcgcgtcgacgtgccgccgccggcgatcctcaagcccgtgcgg ctctggacgggcaagcagctcttctcgttgatcgtgcggccgacggtcgcggcgaagccc gaaaacggcggcgcgtggccctgcgtgtccttcgagtgcgccgagcgcaactacacgggc tcgggcatcgagaccatgtgccccatggacggctacgtgctcttccggcggtcgtcgctg ctctgcggcaacatcgcgaagaagaccgtcggcgacggctcgaagaagggcctcgtctac gagctgtaccgcgagcacggccccgcggcggcggcgacgttcatgaaccgcctcgcgaag ctgtcggcgcgctacctcggctaccacaagggcttctccatcggcatcgacgacgtgacg ccgtccgacgccgtcctcgcgctcaaggcgcagctcctcgaggagggccacgcggaggcg cggcgcaagatcgaggcctacgagtccgggtccctcgcgctccagccgggctgcgacgcg ctccagtccctcgaggcggagctcacgggcctcctgggcaaggtccgggagcaggcgggc aagaacctcatgacgcgcgacctcccgcggtcgaactcgccccggatcatggccgagtgc ggctccaaggggtcggcgatcaacgtgtcccagatgatcgcctgcctcggccagcaggcc gtcgacggcaagcgcatccagaacggcttcgtgcagcggacgctgccgcacttcgaggtc ggcgagctgagccccggcgcgcgcggcttcgtcgccaactccttctacagcgggctgacg gcgacggagttcttcttccacaccatgggcggccgcgagggtctggtggacacggccgtg aagacggcgcagacgggctacatggcgcggcggctcatgaaggcgctcgaggacctgtcc gtgggctacgacggcacggtgcggaactcggagaagaacatcgtccagttcacctacggc gacgacggcctggaccccgtgaagatggagacgggcgactccatgcccgtggacttcggc cggctgctgcaccgcgtgcgccacgacgacgccgcgctctcgtcgcgggcgccgcgcgac ctcgacgccgcggccgtcgcggccgtcgccgaggcctgcggcgccggcgacgccgggccc ttcgggcggctggggcccctcgccgccaagttccgcggcgacgcggcgggcttcctgcgg gacctgagcgagcgcatggccgaccgcgagctccagatgaaggaccactgcggcgacgcg gcgctcgcgcggctcttcgacgacgtcgccctgtcccagggcgacctcgaccgcttccag gccggcgccctcgacaagtacacgcgcggcgtcgtcgagccgggcgaggccgtcggcgcg atcggcgcgcagtgcatctcggagccgggcacgcagatgacgctcaagacgttccacttc gcgggcgtcgcgtccatgaacgtcaccctgggcgtgccgcggctcacggagattattaat gcctccaagaacatctcgacgcccatcatcacggcgcacctcgacaatccttcctccacg acggccgcgcgcgtcgtgaaggcgcgtctggagaagacgacgctcggcgagatctgcaag tccatgaaggaggtctacgggccccggtcctgctacgtgtccgtcgagctcgacgcgacg ctcatcgccgacctgcacctggacgtggacgccgcggccgcgcggaagcgcgtgctgcag gcggtcatggcgtcgggccgcgcgccgccggtgatccgcgcgctcaagaacgagcacgtg cttttgaacccgaaccaccgcaaccgcgacatgctcagcgacgaccgcacctacttcgcc atgcaggcgctgaaatcggcgctgccgtcgatcgtcgtcggcggcgtgtcgtcgatcaac cgcgcggtcgtcaacgaggacgaggggtcgtcgccggcgacctaccacctgctcgtggag ggctacgggctggcggacgtcatgggcacgccgggcgtcgacggccggcggacgacgacg aaccacgtcgcggagatcgaggcggttttgggcatcgaggctgcgcggtcgacgatcgcc aacgagatcacctacatcatgtcggcctacggcatcggcatcgacgcgcgccacctcatg ctcctcagcgacgtcatgaccttcaagggcgtcgtcctcggcatcacgcgcttcggcgtg tcgaagatgcgcgagagcgtgctcatgctggcgtccttcgagcggacgacggaccacctc ttcgacgccgcggcccacggccgccgcgacaacatcgtcggcgtgtccgagtgcatcatc atgggcatccccatcccgctgggctgcggctccttcaagctcctccgcgacaccgacgcg gagcagggcgacgacgacggcgcgccgaagcggaggccgctcatcatggcgtcctga

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