Aureococcus anophagefferens: AURANDRAFT_71064
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Entry
AURANDRAFT_71064 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AURANDRAFT_71064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaf03400
]
AURANDRAFT_71064
DNA repair and recombination proteins [BR:
aaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AURANDRAFT_71064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
Tudor_3
Motif
Other DBs
NCBI-GeneID:
20228052
NCBI-ProteinID:
XP_009034367
JGI:
Auran1_71064
UniProt:
F0Y180
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MPPRKSSTGSSDGKKQTTLSSFFKKASATPKPAKVRPGSEVVGKRLKVWWPADGAWYAGR
VASLTAGGATHEVRYDDGDVEAVDLAVEKYEWLADEASPSAVASTQAYDGGKRAPAAAGG
SAAKRAKRAASDDDDDDAMDDGDDGDDGSDYDGGGGEGAADSADDDSDDDSEEEAPKPKA
RKRRIVVESDDDDDGDAAAPPKKKAPCRISTDVAARGSAAFDASAFHDKYRKRSGGSEAS
APVSAEKARSADDDDEPLVNHDAGDDKARSVFPAGCHLHDTDPGYAFAGADRRDAAGLRP
GDAGFDCRTLKVPKDCAVYRGKGLSEVQRQWWAVKSTHFDCLLFFKIGKFYEMYHMDADV
GVRDGGLVYMKGEQAHSGFPELAYGKYVEALVAKGHKVARVEQTETPDGTKLRVERLKKK
GRKPSSAEKTMRREVCSVVTPGTRTYSVLDMRLEKDGGGFEPVAGPTLLAAVREREVDGV
FTYGVCVCDAPTGTFTLAQFEDDAMRTRLRTLLADKACAEVLVERAAAASDLVDVVRRST
TAAVESLAPGAEFWGADKTVLGSAAADGRAGSLWQLVDHCKTPFGRRLLREWLARPLVDA
RDVADRTDAVAELVEDRALADALRSKLARLPDLERLLQQLHTLGAARRAVAAGDDDDLAQ
HPDARAVLFDAKKFDARKVKQLADALQALGRCAALAEGADVTAPLLAACLGPAGAGGCFP
DLNAKLAAFDSFDLAEAKRTGELAAVRGVDDAYDAALDDKAARVRDLDDWLKDAKREHRC
PDLKYKTSAKDRYCVEVPEQFFARDRAFEHLPAGWTQRTKTKKCRSFLAPDVAELVEALE
DAEKRAAAAKVDQMRSLFAAFDKERDRWAAAVACVGTLDALLALAHVSRRPGFARAVLED
GAEPFVAIDDGAHPCLAGDGASAGDVIANDVHVGGAKPRMLLLSGPNMGGKSTLLRHVCV
SAILAQAGCFVKARAMRLSPVDRVFTRLGASDRILMGQSTFMVELLETAAILKQASAKSL
VILDELGRGTATWDGAAIAHAVVHHLVANSKCRALFATHYHDLVASWAGHSDVQLGHMDC
LVDPESDTVVFLYKLTDGCSPKSFGINVAKLAKLPKKVLDRAAAKSAEFEAKLKAKSQAK
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcgcaagtcctcgacgggcagcagcgatggcaagaagcagacgacgctctca
tccttcttcaagaaggcgtcggcgacgcccaagcccgccaaggtgcggcccgggtccgag
gtcgtcgggaagcggctcaaggtctggtggcccgccgacggcgcctggtacgccgggcgc
gtggcgtcgctgaccgccgggggcgcgacgcacgaggtgcgctacgacgacggcgacgtc
gaggccgtcgacctcgccgtcgagaagtacgagtggctcgccgacgaggcgtcgccgtcg
gccgtcgcgtcgacgcaggcctacgacggcggcaagcgcgcgccggccgccgccgggggc
tcggccgcgaagcgcgcgaagcgcgccgcgtccgacgacgacgacgacgacgccatggac
gacggcgacgacggcgacgacggctcggactacgacggcggcggcggcgagggcgccgcg
gacagcgcggacgacgacagcgacgacgacagcgaggaggaggcgcccaagcccaaggcg
cggaagcggcgcatcgtcgtcgagagcgacgacgacgacgacggcgacgccgcggcgccg
ccgaagaagaaggcgccgtgccgcatctcgacggacgtcgcggcccgcggctccgcggcc
ttcgacgcgtcggcgttccacgacaagtaccgcaagcggagcggcggctccgaggcgtcc
gcgcccgtgtccgcggagaaggcgcggtccgcggacgacgacgacgagcccctcgtgaac
cacgacgcgggcgacgacaaggcccgctccgtcttccccgcgggctgccacctccacgac
acggacccgggctacgccttcgccggcgccgaccgccgcgacgccgcgggcctgcggccc
ggcgacgccggcttcgattgccggacgctgaaagtgcccaaggactgcgcggtctaccgg
ggcaagggcctcagcgaggtccagcgccagtggtgggccgtcaagtcgacgcacttcgac
tgcctcctcttcttcaagatcggcaagttctacgagatgtaccacatggacgcggacgtc
ggcgtccgcgacggcggcctcgtctacatgaagggcgagcaggctcactccgggttcccc
gagctcgcctacggcaagtacgtcgaggccctcgtggccaagggccacaaggtcgcgcgc
gtcgagcagacggagacgcccgacggcacgaagctgcgggtcgagcggcttaaaaaaaag
ggccggaagccgtcgtccgcggagaagacgatgcgccgcgaggtctgcagcgtcgtcacg
ccgggcacgcggacctactccgtgctcgacatgcgcctcgagaaggacggcggcggcttc
gagcccgtggccgggcccacgctcctcgcggccgtccgggagcgcgaggtcgacggcgtt
ttcacgtacggagtctgcgtgtgcgacgcgcccacgggcacgttcacgctggcccagttc
gaggacgacgccatgcgcacgcgcctccggacgctcctggcggacaaggcctgcgcggag
gtgctcgtggagcgggccgcggccgcgtccgatttggtggacgtcgtccgccggtcgacg
acggccgccgtggagagcctggcgccgggcgccgagttctggggcgcggacaagaccgtc
ctcgggtccgcggcggccgacggccgcgccgggtcgctctggcagctcgtggaccactgc
aagacgcccttcggccggcggctgctgcgcgagtggctcgcgcggcccctcgtggacgcg
cgggacgtcgcggaccgcacggacgcggtcgcggagttggtggaggaccgggcgctcgcg
gacgcgctccggtccaagctcgcgcggctgccggacctcgagcgcctcctccagcagctc
cacacgctcggcgcggcgcggcgcgccgtcgccgccggcgacgacgacgacctcgcgcag
cacccggacgcgcgcgccgtgctctttgacgcgaagaagttcgacgcgcgcaaggtcaag
cagctcgcggacgcgctccaggccctgggccgctgcgcggcgctggccgagggcgccgac
gtgaccgcgccgctcctcgccgcgtgcctcggtcctgccggcgcgggcggctgcttcccg
gacctgaacgcgaagctcgcggcgttcgactccttcgatctcgccgaggcgaagcgcacg
ggcgagctcgcggccgtgcggggcgtcgacgacgcctacgacgcggccctggacgacaag
gccgcgcgcgtccgcgacctcgacgactggctcaaggacgcgaagcgcgagcaccggtgc
ccggacctcaagtacaagacgagcgccaaggaccgctactgcgtcgaggtgcccgagcaa
ttcttcgcccgggaccgcgccttcgagcacctgcccgcgggctggacgcagcgcacgaaa
accaagaagtgccggtcgttcctcgcgcccgacgtcgccgagctcgtcgaagcgctcgag
gacgcggagaagcgcgcggccgcggccaaggtcgaccagatgcggagcctcttcgcggcc
ttcgacaaggagcgggaccgctgggccgccgccgtcgcctgcgtgggcacgctcgacgcc
ctgctcgcgctcgcgcacgtgagccggcggccgggcttcgcgcgcgcggtcctcgaggac
ggcgccgagcccttcgtcgccatcgacgacggcgcccacccctgcctcgcgggcgacggc
gcgtcggccggcgacgtcatcgccaacgacgtccacgtcggcggcgccaagccgcgcatg
ctgctgctgtcggggcccaacatgggcggcaagtcgacgctgctccgccacgtctgcgtc
tccgcgatcctcgcgcaggcgggctgcttcgtcaaggccagggccatgcgcctgagcccc
gtggaccgcgtcttcacgcgcctcggcgcgtcggaccgcatcctcatgggccagtcgacg
ttcatggtcgagctcctcgagacggccgcgatcctcaagcaggcgtcggccaagtcgctc
gtcatcctcgacgagctcggccggggcacggcgacctgggacggcgcggccatcgcccac
gccgtcgtccaccacctcgtcgcgaactccaagtgccgcgccctattcgcgacgcactac
cacgacctcgtcgcgtcctgggcgggccactccgacgtccagctcggccacatggactgc
ctcgtcgacccggagtccgacaccgtcgtcttcctctacaagctcaccgacggctgctcc
cccaagtccttcggcatcaacgtcgccaagctcgcgaagctccccaagaaggtcctcgac
cgcgccgcggccaagagcgccgagttcgaggccaagctcaaggccaagtcccaagccaag
tga
DBGET
integrated database retrieval system
