Aedes albopictus (Asian tiger mosquito): 109414186
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Entry
109414186 CDS
T06060
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
aalb
Aedes albopictus (Asian tiger mosquito)
Pathway
aalb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aalb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109414186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalb03400
]
109414186
DNA repair and recombination proteins [BR:
aalb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109414186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
109414186
NCBI-ProteinID:
XP_019543514
LinkDB
All DBs
Position
Unknown
AA seq
1138 aa
AA seq
DB search
MSKNKDKLNSSNTLFNYFSKSPATPKIKPVGSGSNPGTPVSSASNGGTPKGIKLEKVVPS
PVEKKEEVNGVRGGVDDEDEIQPVKKRRRIVMMDDEEEGDGDSDSENRVKNEKTPPKAEL
LSSFKRVVKEEVAESPVQKKVKVEAVDSGEGKKDLADLGGDEGDASAAVLDEPTVWAHQK
LDFLKPDKVKDIHGNRPSSEKYDSRTLYVPESFLNTLTPANRQWWELKCRHMDCVLFFKV
GKFYELYHMDATVGVEELGFSYMKGEFAHSGFPEQAYERMATLLVEKGFKVARVEQTETP
DMMQERCKKNKTNSKYDKVVKREICQVSLKGTEVFGQQVHMTLNHQPKYMLAITERTKGE
VGSRYGVCFVDTSLGVFHVGEFEDDSQGSRLLTLLSHYGPALVLQERNVASAATQQIFKT
VLAGIRKEALTNESQFWSAEKTLKYLAENFYGSSKDDQSSKWPAVIRSLLDKNDHLGLTP
DENFKLALKALGGCIWYLKRCLLDQQIISLASFEMYIPPDDADTCKNLKIENTNRFMVLD
SVTLNNLRITEGEHSLVNRMDHCCTKFGKRLFHHWICSPSCERDVIVQRQEAVSELIDDV
SLLQDVRQILGELPDLERMLAQIHTFGNAERSKNHPDGRAILYEEQTYGKKKIQDFINTL
KGFEILTKVPELFGKVSSKLLVHLTQTPERGGSFPDMADKIRFFEEAFDHDQALKDGVIA
PGEGLDAEYDAVDRDITTILEELEEYKRKQEKYFGCKITYFGTDKKRFQLEIPESAAKKA
NSGYTLEGQKKGKNGVKRYHTDETRDFLKRMLQTEDQRKAVLKDLSRRIFEKFSSSYQMW
KTCIDLTGTLDVLTSLAEYARSEGNMCVPEILDDSVGQVFELEEGIHPCVSDAENYIPNG
VKIGGDGAPLVLLTGPNMGGKSTLMRQVGILAVMAQIGSRIPAESCRMTLIDRIFTRLGA
NDDIMAGHSTFLVELNETSTILKHATRKSLVLLDELGRGTATYDGTSIAGAVVNYLADLK
CRSMFSTHYHNLVDNFTTDSRVRLGHMACMVENEDDEDPTQETVTFLYKYADGACPKSYG
FNAAKLAGMPACIIKRAHELSKTVEAEALKRRIFTKSLLQENPGDLKELLRKLKACRF
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaacaaagacaagcttaacagctcgaacacgctgttcaactacttttccaaa
tcgccagccacaccaaagatcaaaccggtcgggtcgggatcgaatcccggaacgccggtg
agtagtgcctccaatggaggtaccccaaagggaattaagctggagaaagttgtgccatca
cctgtggaaaagaaggaggaggtgaatggcgtgaggggtggagtagatgacgaggacgag
atccaacccgtgaagaagcgaaggcggattgtcatgatggatgatgaggaagaaggggat
ggggactcggacagcgagaaccgggtgaagaacgagaagacgcccccgaaggcggagctg
ctgtcgtcgttcaagcgggtggtgaaggaggaggttgcagagtcgccggtgcagaagaag
gtcaaggtggaagccgtggatagtggtgagggaaagaaggatttggcggatttgggtggc
gatgagggcgatgcgagtgctgcagttctggacgaaccaacggtttgggctcatcaaaag
ttggacttcttgaaaccggacaaggttaaggacatccacggaaatagaccgagcagcgag
aagtatgactcgagaactctatatgtgccggaatcgttcctgaacacgctgacaccggcc
aatcgtcagtggtgggagctgaagtgtcgtcacatggattgtgtgctgttcttcaaggtg
ggcaagttctacgagctgtaccacatggatgccaccgtcggagtggaggagctaggtttt
tcctacatgaagggtgagtttgcccattccggctttccggagcaggcgtacgagcggatg
gccactttgctggtggagaagggattcaaggtggctcgcgtggagcaaaccgaaacgccg
gacatgatgcaggagagatgcaagaagaataagaccaactcgaagtatgacaaggtggtg
aagagggagatttgtcaggtttctctcaaggggacggaggtttttggccagcaggtgcac
atgaccctcaaccatcagccgaagtatatgctggccattacggagcgtaccaagggggag
gttggcagtcggtatggagtgtgtttcgtggatacttccttgggggtgtttcacgttggc
gagttcgaggatgattcgcaaggatctcgactgttgacattgctatcgcattacggcccg
gcgttggttcttcaagagcggaatgtggcctcggcagcgacgcaacagatcttcaaaaca
gttctggctggaatccggaaggaagctcttaccaacgaatcccagttctggtccgccgag
aaaacgttgaaatatctggcggagaacttttatgggagttcaaaggacgatcagagctca
aaatggccagcagtgatccgctctctgttggacaagaacgatcatctgggattgacgccg
gatgagaacttcaaactagcattgaaagctttgggaggttgtatttggtatctgaagcga
tgtttgctggatcagcagattatttcgctggccagtttcgagatgtacattccgccggat
gacgcagacacttgcaagaacttgaaaatcgagaacaccaatcgcttcatggtgctggat
tcggtaactctgaacaatctccggataaccgaaggtgaacattcgctggtcaaccggatg
gaccactgctgtacgaagtttggcaagcgcctcttccatcactggatttgctccccaagc
tgcgagcgggacgttatcgttcagagacaggaagcggtttcggagctgattgatgacgtt
tcactacttcaggacgtgcgtcaaattctgggcgaacttccggatcttgagcgaatgcta
gctcagattcacacgtttggtaatgcggagcgcagcaagaaccatccggacggaagggcc
atcctttacgaagagcaaacctacggtaaaaagaagatccaggacttcatcaacactttg
aaaggattcgaaatccttactaaagtgccggagttgttcggaaaagtttcctccaagctt
ctggttcatctgactcaaaccccagaacgaggtggatcgtttccggacatggcggataaa
attcgtttcttcgaagaagccttcgaccatgaccaggctctcaaggacggcgtgatcgct
ccgggtgaaggcttggacgcggagtacgatgccgtggacagagatatcacaaccatcctg
gaagagctcgaggaatacaaacgaaagcaggaaaagtactttggctgtaaaataacttac
ttcggaacggataagaagcggttccagttggagattccggagagtgccgccaagaaggcc
aacagtggttataccttggaagggcagaaaaaaggcaagaacggcgtcaagcgctatcac
acggacgagactcgtgacttcctgaaacggatgttgcaaaccgaggatcaacgaaaagcg
gttctcaaggatttgtcccggagaatctttgaaaagttctccagcagctaccagatgtgg
aaaacatgcatcgatctaaccggtacgctggacgttcttacgtcgttggcggagtatgcc
cgaagcgagggaaatatgtgcgtcccggagattctggatgactccgttgggcaagtcttc
gagttggaagaaggcattcatccgtgcgtaagcgatgcggagaactacatcccgaacggg
gtgaaaatcggaggagacggggctccgctggtccttctgaccggtccgaacatgggcggt
aaaagtactctgatgcgtcaggtcggaatcctggccgtcatggctcagatcggttcgcgg
attcctgccgagagctgccgcatgacactcatcgatcggatcttcacccgcttgggtgcc
aacgatgacatcatggctggccatagtacgttcctggtggaactgaacgagacttccaca
atcttgaagcacgcaacccgaaagagtttggtcctgctggatgaactgggccgtggaacg
gccacctatgatggaacgtcgatcgctggggcggtggtcaactacctggccgacctcaag
tgccgctcgatgttctcgacccactatcacaacctggtggacaactttaccacggatagt
cgcgtccggttgggtcacatggcttgcatggtggagaacgaagacgacgaagatcccacc
caggaaacggttaccttcctgtacaaatacgccgatggtgcatgtcccaaatcgtacgga
ttcaacgctgccaagctggcaggcatgccggcgtgcatcatcaagcgggcccatgagctg
tcgaaaaccgtcgaagcggaagcgttgaaacgtagaatcttcaccaaatcgctcctacag
gagaatcccggcgacctaaaggaactactccgcaaacttaaggcctgtcggttttaa
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