Advenella alkanexedens: Q3V95_02845
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Entry
Q3V95_02845 CDS
T09248
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aaln
Advenella alkanexedens
Brite
KEGG Orthology (KO) [BR:
aaln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aaln03009
]
Q3V95_02845 (rimO)
Enzymes [BR:
aaln01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Q3V95_02845 (rimO)
Ribosome biogenesis [BR:
aaln03009
]
Prokaryotic type
ribosomal protein modification factors
Q3V95_02845 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Homeobox_KN
Motif
Other DBs
NCBI-ProteinID:
WKU19996
LinkDB
All DBs
Position
complement(600300..601619)
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AA seq
439 aa
AA seq
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MSNPKVGFVSLGCPKALVDSERILTQLRTEGYQISPSYENADVVVVNTCGFIDSAKAESL
EAIGEALAENGKVIVTGCMGVEENIIRDVHPSVLAVTGPQQYEEVVRAVHEAAPPNLEHD
PFTDLVPPQGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPIGDVLDEAQRLVN
AGVKEILVISQDTSAYGVDLKYRSGFWNGRPVKTRMTELCSALSEMGVWVRLHYVYPYPS
VDEVIPLMAEGKILPYLDIPFQHASPRILKAMKRPAFEDKTLARIKKWREICPELTIRST
FIVGFPGETEEDFQYLLDWMSEAQLDRVGCFQYSPVEGAPANELADPVPDDIKQDRWERF
MAHQQAISAARLQTKIGREISVLVDEIDEDGDAIGRSSADAPEIDGCVYLSSEKTLKPGD
IVRAVVTDADEYDLWADVK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccccaaagtcggttttgtcagccttggctgtcccaaagccctggtcgattct
gaacgcattcttacccagttgcgtactgaaggctatcaaatttccccctcctatgaaaat
gcggatgtcgtggtggtaaacacctgtggcttcatcgacagcgccaaagctgaatcgctg
gaagccattggggaagcacttgccgaaaatggcaaagtcattgtgaccggctgcatgggt
gtggaagaaaatatcattcgcgatgtgcaccccagtgtgctggcggtaaccggcccccag
caatatgaggaagtggtgcgtgccgtacacgaggctgccccacccaatctggagcacgac
ccgtttaccgacctggtgccaccacaaggcatcaagttaacgccccgccactacgcctac
ctgaaaatatccgaaggctgcaaccaccgctgcagcttctgtattattccgtccatgcgc
ggagacctggtcagccgcccgattggcgatgtcctggacgaggcccagcgcctggtgaat
gccggcgtgaaagaaatcctggtgatttcccaggataccagcgcctatggggtagacctt
aaatatcgcagcggtttctggaatggccgcccggttaaaacccgcatgaccgagttatgc
agcgccctgtcagaaatgggcgtctgggttcgcctgcactatgtgtacccctatcccagt
gttgatgaagttattcccttaatggccgaaggtaaaatactgccctatctggacattcct
ttccagcacgccagcccgcgcattttaaaagccatgaaacgcccggcatttgaggacaaa
accctggcccgcattaaaaagtggcgtgaaatctgccctgaactcaccatccgctccacc
tttatcgtgggctttcccggtgaaaccgaagaagatttccaatacctgcttgactggatg
agtgaagcccagcttgaccgggttggctgcttccaatactcgcccgtcgaaggcgcaccc
gccaacgaattggccgaccctgttcctgatgatatcaaacaggatcgctgggaacgcttc
atggcgcaccagcaagccatttcagccgctcgtctgcaaacgaaaattggcagggaaatt
agcgttctggttgacgaaattgacgaagatggcgatgcgattggccgctccagcgccgac
gcccccgaaattgacggttgtgtttacctaagcagtgaaaagacactgaaaccgggcgat
atcgtgcgtgcggtggtaaccgatgccgatgaatacgatttgtgggcagacgtcaaataa
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