KEGG   Alternaria alternata: CC77DRAFT_1015338
Entry
CC77DRAFT_1015338 CDS       T05291                                 
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
aalt  Alternaria alternata
Pathway
aalt03020  RNA polymerase
aalt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aalt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CC77DRAFT_1015338
  09124 Replication and repair
   03420 Nucleotide excision repair
    CC77DRAFT_1015338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aalt03021]
    CC77DRAFT_1015338
   03400 DNA repair and recombination proteins [BR:aalt03400]
    CC77DRAFT_1015338
Transcription machinery [BR:aalt03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     CC77DRAFT_1015338
DNA repair and recombination proteins [BR:aalt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CC77DRAFT_1015338
SSDB
Motif
Pfam: RNA_POL_M_15KD
Other DBs
NCBI-GeneID: 29109594
NCBI-ProteinID: XP_018391420
JGI: 1015338
UniProt: A0A177E4T5
LinkDB
Position
Unknown
AA seq 167 aa
MASPAAQMGGSKGGKEPILFRFCSECSNLLFPREDKSENKLLFACRTCSFTEEAPSSCVM
RHEIASTVGATAGVTAEVAQDPTVGYSLSDAQAAQAALSEEMPCCTMCGMPIMCQECGEE
SAPGFALEAEDEDPQAERPQQEMREEDEMFEDYDDDYDEDMWDEPTS
NT seq 504 nt   +upstreamnt  +downstreamnt
atggcgtctccagcagcacagatgggaggctccaagggcggcaaggagcccattctcttc
cgcttctgctcagaatgttccaacttgctgttcccccgcgaagacaagtccgagaacaag
ctgcttttcgcctgccgcacatgcagcttcaccgaagaagcgccctcatcctgcgttatg
cgccacgaaatcgcgtccacagtcggagccacagccggtgtcacagccgaggttgctcag
gatcccacggttggttactccctgtccgatgcccaagctgcccaggccgctctttctgag
gagatgccctgctgcaccatgtgtggcatgcccatcatgtgccaggagtgcggcgaggaa
tcggctcctggctttgcgctggaggccgaggacgaggacccgcaggcagagcgtccccag
caggagatgcgcgaggaggatgagatgtttgaagattacgacgacgattacgatgaagac
atgtgggacgaacccacgtcttga

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