Alternaria alternata: CC77DRAFT_1066612
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Entry
CC77DRAFT_1066612 CDS
T05291
Name
(RefSeq) DNA-directed RNA polymerase I polypeptide 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
aalt
Alternaria alternata
Pathway
aalt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CC77DRAFT_1066612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aalt03021
]
CC77DRAFT_1066612
Enzymes [BR:
aalt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CC77DRAFT_1066612
Transcription machinery [BR:
aalt03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
CC77DRAFT_1066612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Rpr2
BA14K
Motif
Other DBs
NCBI-GeneID:
29114508
NCBI-ProteinID:
XP_018380256
JGI:
1066612
UniProt:
A0A177D573
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MAPAARADSPQEWRHDLFRNPPKDKTAYPTLAAAVDPHINSFNTIFTPGGQLAQGIRDIG
TKIFLDGDPYAAPEDVGQRNRLSLRISDVFLDKPVLPPSNKVALKNRNIYPAEARERHAS
YRGKMRARLEWRVNNGDWQEDVVDLGGVPVMLRSNRCQLEGMSPAALVKAKEESDELGGY
FIVNGIEKIIRLLQVNRRNYPMAIKRGAFTNRGPGYTQFGIQLRSMRPDQTSQTNALHYL
SDGNVNFRFSWRKSEYLVPIVMVMKALVETNDREIFEGLVGAAGSEGLEEKQFVTDRVEL
LLRTYKVYGLHTKAKTRAYLGGKFKVVLGLPADVTDEEAGTEFLRKIVLPHLGCVNVTPS
QDADKFRMLLFMARKLYALVEGDCAVDNPDAVQNQEILLGGQLYGMILKEKLEEWLNSFQ
LVLREWGRKTEYKPFTSQDFTKDWNSRILRRTQMNLGQAMEYFLSTGNLISPTGLDLQQT
SGYVVVAEKLNFPRFISHFRMVHRGAFFAQLKTTTVRKLLPESWGFMCPVHTPDGSPCGL
LNHFAHKCKIATSNLDVSAIPNLVAQLGVSSKSSASLEASVVVQLDGRVLGFCSPKQAKV
IADTLRYWKVEGSHNVPLEMEIGYIPGSNGGQYPGVYMFSQSSRMYRPVKYLPLSKTDYV
GPFEQPYMSIACTDAEIVSGDSTHVEIEPTNIFSIIANQTPFSDFNQSPRNMYQMGKQSM
GTPGTAMAYRTDNKTYRLQTGQTPIARPPLHNEYGMDNFPNGMNAVVAVISYTGYDMDDA
MILNKSSHERGFGHGTVYKTKICDLEEGSRRNRSSRTVTKLFGFAPEGLVKAAAKETLDE
DGLPRIGTMLRSGDVIAAWHTVSYDPATGDYINRDGQTQFFKYKDDELAFVEEVRIIGAE
DGAQPCQKLSIKLRIPRSPVVGDKFSSRHGQKGVVSQKFPTPDMPFSESGMQPDVIINPH
AFPSRMTIGMFVESLAGKSGALHGMAQDSTPFRFDEQNTAVDYFGHQLSKAGYNYYGNEP
MYSGITGQELHADIYIGVVYYQRLRHMVNDKFQARTTGPVVSTTGQPIKGRSKGGGIRVG
EMERDSLLAHGTAFLLQDRLMNCSDYTKAAICRTCGSFLSTTPTVSEYGRKKDRSGKDIT
IRCRRCAVLADNTSSKADLWMDAQGLRYSGGEDVAVVAVPGVLKFLDIELASMGVRLKFN
VGP
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgccgcaagggccgacagcccgcaggaatggcggcacgacttgttccgcaac
ccccccaaagacaagacagcatatcccacgctcgctgccgccgtggacccccacatcaac
tcgttcaacaccatcttcactcccggcggccagctagctcagggcatacgagacattggc
accaagatcttcctcgatggcgacccatacgccgcgcccgaagacgttggccagagaaac
cgcctctctctgcgcatctccgatgtcttcctcgacaagccagtcctgccgccttccaac
aaggtcgcgctcaagaaccgaaatatctatcctgccgaagcccgagaacgacatgcttcg
taccgcggcaagatgcgtgcgcgacttgagtggcgggtcaacaacggagattggcaggag
gacgtcgtggatctcggcggcgtacccgtcatgctgagatcgaaccgctgccagcttgag
ggcatgtcgccagcggcactagtcaaggcgaaagaagagtctgacgagcttggcggctac
ttcatcgtcaacggcatcgagaagattatccgtctcctccaggtcaatcgtcgcaactac
cccatggccatcaagcgtggcgcctttaccaaccgtggccccggttacacccagttcggt
atccagctcagatcgatgcgacccgaccagacctcgcaaaccaacgccctgcactacctc
agcgacggcaatgtcaacttccgtttttcctggcgcaagtccgaatacctggtccccatc
gtcatggtgatgaaggccttggtcgaaaccaacgaccgcgagattttcgagggtctggtt
ggcgccgccggctcagaaggtctggaagagaagcaattcgttaccgatcgcgtggaactg
ctactccgaacatacaaggtctacgggctgcacaccaaggcgaagactcgcgcgtatctt
ggtgggaagttcaaggtcgtacttggtctgccagccgacgtcaccgacgaggaggccggt
acagaattcctccgcaagatcgttctacctcatctaggctgcgtaaatgtcacaccgagt
caggacgcggacaagttcagaatgctgctgttcatggccaggaagctttatgctttggtc
gaaggcgactgcgctgtcgacaacccggatgccgtccagaaccaggagattctgctaggc
ggccaactctacggcatgattctgaaggagaagctggaggagtggctcaacagctttcag
ctagtcctgagggagtggggaaggaagacggagtacaagccctttacatctcaagatttc
accaaggattggaactcgaggatcctccgaagaacacaaatgaaccttggtcaagctatg
gagtacttcctcagtacaggcaatttgatcagtccgactggtctcgatttgcaacaaaca
tccggatatgttgtggttgctgagaaattgaactttccacgtttcatctcccatttccga
atggtgcatcgaggtgctttcttcgcccagcttaagacaaccacggttcgtaaattgctg
ccggagtcatggggcttcatgtgtcctgtccacacccctgacggtagtccttgtggactt
ctcaaccattttgcccacaaatgcaagattgcgacttccaacctcgatgtctcagcaatt
cccaatctcgttgcgcaactgggcgtatcgagtaagtcgtctgcctccctggaagctagt
gtggttgttcaattagacggtcgtgtcctaggtttctgctcgccaaagcaagccaaggtc
atcgcggacacgcttcgttactggaaggttgaaggctcacacaatgtaccattggagatg
gaaattggttacatccccggatccaacggtggccagtacccaggtgtctacatgttctcg
caaagctcgcgaatgtaccgacctgtcaagtacttgcctctcagcaagacagactacgta
ggaccattcgagcaaccatacatgtcgattgcatgcacggacgccgagatcgtatccggt
gattcaacgcacgtggagatcgagcccacgaacatcttcagtatcatcgccaaccaaaca
cccttctcggacttcaatcaatctccacgtaacatgtaccagatgggtaaacaatcgatg
ggtacaccaggaactgctatggcctaccgaaccgacaacaagacctaccgcttacagact
ggtcaaactcccatcgctcggcctccattgcacaacgagtacggcatggacaacttcccg
aacggaatgaatgcagttgtggctgtcatctcctacaccggatacgacatggacgacgct
atgatcttgaacaagtcatcacacgagcgcggtttcggccacggcactgtttacaagacg
aagatttgtgacctcgaagaaggcagccgaaggaatcgatcaagcaggacagttaccaag
ctgtttggctttgctcccgaaggcttggtgaaagccgcggccaaggagactctcgatgaa
gacggtcttcctcgtattgggactatgctgcgatctggcgacgtcattgctgcatggcac
actgtttcgtacgacccagctaccggcgattacatcaaccgcgacggccagacacagttc
ttcaaatacaaggacgatgaactcgcttttgtcgaagaagtccgtatcatcggcgctgag
gatggagcacaaccatgccagaagctcagcatcaagcttcgcattcctcgttctcctgtc
gtaggtgacaagttctcttccagacatggacagaagggtgtcgtcagtcagaagttcccc
actccagacatgccattctcggaaagcggtatgcagcctgatgttatcatcaaccctcac
gctttcccctcgcgaatgacaattggtatgttcgtcgagtcgctagctggaaagtctgga
gcactccacggtatggcccaggattcaacgcccttccgctttgacgagcaaaatactgct
gtcgactatttcggtcaccagctatccaaggctggttacaactactacggcaacgagcct
atgtactcgggtatcactggacaagaattgcacgcagatatctatatcggtgtcgtctac
taccagcgtctacgacacatggtcaatgataagttccaagccagaaccacgggtcctgtg
gtgtccacgacagggcagcctatcaagggaagaagcaagggaggtggtatccgtgtcgga
gaaatggaacgtgattctctacttgctcacggcacagccttccttctccaggaccgcttg
atgaactgctccgattacaccaaagcagccatctgccgtacctgcggctctttcctcagc
acaacaccaaccgtcagcgagtacggtcgcaagaaggatagaagtggcaaggacattacc
atccgttgcagaaggtgcgccgtattggccgacaacaccagcagcaaagccgatctgtgg
atggacgcacaaggcctgcgatactctggtggcgaagacgttgctgtggttgcagtacct
ggtgtgctcaaattccttgacattgagctggctagtatgggtgtcaggctcaagttcaac
gtcgggccgtaa
DBGET
integrated database retrieval system
