Alternaria alternata: CC77DRAFT_969022
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Entry
CC77DRAFT_969022 CDS
T05291
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
aalt
Alternaria alternata
Pathway
aalt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CC77DRAFT_969022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aalt03021
]
CC77DRAFT_969022
Enzymes [BR:
aalt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CC77DRAFT_969022
Transcription machinery [BR:
aalt03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CC77DRAFT_969022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Mpt_N
Motif
Other DBs
NCBI-GeneID:
29121376
NCBI-ProteinID:
XP_018382943
JGI:
969022
UniProt:
A0A177DEE0
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MVGKKEVAKPKAAPRGAVKANAATAAPAVKKVDGDMDVDTGGANPQPTAGDDATDLNPDA
STSAGATRKRQAPLTHAKDEFAALLEPFYYGKSLTDPINTARDKWNLLPAFLKTKGLVKQ
HVDSYNHFVDVELKKIIKANRFVRSDFDPKFLLEYTDIRVLSPNRQEEDDLEHHRSTITP
NECRLRDMTYAAPIVVDIIYTRGNAKVKRTGIKIGRMPIMLKSNKCVLAGKNDREMAVME
ECPLDPGGYFITRGQEKVILVQEQLNKNRVIVESAKGIMQASVTSSTHERRTKTYVIQKK
GLMYLRHNTLSEEIPIVFVMKALGVHSDKEILLMIAGEDSAYQDNFAINFEACAREQIHT
QERALEYIGHRVRLVKKPLGTSRSRNYHLEAIECLSNVVLPHVPVEGTNYRPKALYVALM
ARRVLMAMQDPKLVDDRDYVGNKRLELSGQMLSLLFEDHFKRFNHDFKLSIDKVLKKPVR
AQEFDAFSHFSVHKNHITMGVERAIATGNWSLKRFKMERAGVTHVLSRLSYIAALGMMTR
ISSQFEKTRKVSGPRALQPSQFGMLCTSDTPEGEACGLVKNLALMTHITTEDDDDPVRKI
VFMLGAEDICSQTGEEIHSEGVYSVCLNGTPIAVTDTPKRFLNSFRKLRRMGRISEFTSI
HIDHDHCEVHIATDEGRICRPMIIVENQRSKVTSRYLKALRKGTMEFEDFLHRGLVEYLD
TNEENDTNIALKETEINQHTTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAI
GAIAYNQFNRIDTLLYLMVYPQQPMVKTRTIELTKYDKLPAGQNATVAVMSYSGYDIEDA
LILNKASCDRGFGRCQVFKKHVTPLKTYANGTSDRINAGALDVDNSSHQAIGQDGIAQVG
ARIEAGDAYLLKSIPQDTAGPATNVYKDKPDKYKLPDCSYIDKACITENEAGTTLIKLLM
RQTRRPELGDKFSSRHGQKGTTGLIVQQEDMPFNDQGICPDIIMNPHGFPSRMTVGKMME
LLSGKAGVLNGTLEYGTAFGGSTVEDMSQILVEKGFSYTGKDYLTSGITGEAHQFYTFFG
PIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRARDGGLRLGEMERDCLIAYGASQLLL
ERLMISSDAHNVDVCEKCGQMGYSGYCKLCESEKAVRKITMPYAAKLLIQELGSMNVKVT
IGLEDEFPRDA
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggtaggcaagaaggaagtcgcgaagcccaaagctgccccgcgcggggccgtgaaggcg
aatgctgcgactgctgcgcctgcggtaaagaaagttgacggcgatatggatgtagatact
gggggtgccaaccctcagccaacagcgggcgatgatgcgaccgacctcaatcctgatgct
tcaacatcggccggagcgacacgaaagcgacaggcgccgcttactcatgccaaagacgag
ttcgccgccctcctcgagccgttctactacggaaagagcctgaccgacccgatcaatact
gcgcgcgacaaatggaacctactgccggcgttcctgaagaccaagggtctcgtcaagcag
cacgtcgattcgtacaaccactttgtcgatgtggaactcaagaaaatcatcaaggccaac
cgctttgtccgcagcgatttcgaccccaagttcctcctcgagtacacagacattcgcgtc
ctttctccgaaccgacaggaagaagatgacctcgaacaccaccgcagtaccattacaccc
aacgaatgtcggttgcgcgacatgacatatgctgcgccgatagtggtggacattatatac
acccgcggaaatgccaaggtcaagcggacgggcatcaaaattgggcgaatgcccatcatg
ttgaagagcaacaagtgtgtgctcgcaggaaagaacgatcgcgagatggcagtcatggag
gagtgcccgctagacccaggaggctacttcattactcgagggcaagagaaggtcatcttg
gttcaagagcagctgaacaagaatcgagtcattgttgagagcgcaaagggtatcatgcaa
gccagcgtaacgagttctacgcacgaaaggcgaaccaagacatacgtgattcagaagaag
ggcctcatgtacctccgacacaacacgctctccgaagagattccgatcgtattcgtaatg
aaggcactgggcgtacactccgacaaggaaatcctgctgatgatagccggcgaggacagc
gcgtatcaggacaactttgctatcaacttcgaggcatgcgcaagggaacagatccacacc
caggaacgagcgcttgagtacatcggccatcgcgtacgactagtgaagaagccgcttggt
acgtctcgcagccggaactatcacttggaggctattgagtgtttgtccaacgtcgtactt
ccccacgtcccagtcgaaggcacaaactaccgaccaaaggccctctacgtcgccctcatg
gcgcgtagagttctgatggccatgcaagacccaaagctagtggatgaccgtgattatgtc
ggaaacaagcgtctcgagttgtctggtcagatgttgtcgcttctcttcgaggaccacttc
aagcgtttcaaccacgacttcaagctgagtatcgacaaggtcctgaagaagccggtccga
gcgcaagagtttgacgccttttcccacttcagtgtacacaagaatcacatcaccatgggt
gtcgaacgtgccattgcgactggaaactggagtttgaagcgtttcaagatggagagagct
ggtgttacacacgtcttgagcagactgagttatatcgctgcgctaggtatgatgacgaga
atcagttcacaattcgaaaagacgcgtaaggtttccggtcctcgtgcgctgcagccatcg
caatttggtatgctttgcacatcagataccccagaaggagaagcctgcggtcttgtcaag
aacttggcgttgatgacacatatcacaaccgaagatgatgacgatccagtgcgcaagatt
gtgttcatgctaggcgctgaagatatctgttcgcaaacaggagaagagatccattcggag
ggtgtgtacagtgtgtgtctcaacggtacacctatcgctgtcaccgatacaccaaagcga
ttcctcaacagcttccggaaactcaggcggatgggtcgcatctctgagttcaccagcatt
cacattgaccacgaccactgcgaagtccacatcgctacggacgaagggcgaatttgccgt
ccaatgattattgttgagaaccaacgctctaaagttacgtcgaggtacctgaaagccctt
cgcaagggaacaatggagtttgaagacttcttgcacagaggtctagttgagtatctcgat
acaaatgaagagaacgacacgaacatcgctttgaaagagaccgaaatcaaccagcacacc
acacatctcgagattgaacccttcaccatcctgggtgctgtcgctggtcttatcccatac
cctcaccacaatcaatcccctcgtaacacttaccaatgcgctatgggtaagcaagctatt
ggcgccatcgcctacaaccagttcaacagaatagatacactgctatatctcatggtctac
ccccaacagcctatggtcaagacacggactatcgagctcactaagtacgacaaactgcct
gccggtcaaaacgcaactgtcgcagtcatgtcctactccggctacgatattgaggatgcg
ctcattctgaacaaagcctcctgcgaccgcggcttcggtcgctgccaggtgttcaagaag
cacgtcacgcctctcaagacgtatgccaacggtacctctgatcgcatcaatgctggcgct
ctagacgtagacaactccagccaccaagccatcggtcaagacggtatcgctcaagtcggt
gcccgcattgaagctggcgatgcttacctcctaaagtccatcccccaggacaccgcagga
cccgcaacaaacgtttacaaagacaagcccgacaagtacaagttgcccgactgcagctac
atcgacaaagcatgcatcaccgagaatgaagcaggaaccacactaatcaagctcctcatg
cgacaaacccgccgcccagaactcggcgacaagttttcttcgcgccacggccaaaaaggt
acgacaggtctcatcgtccaacaagaagacatgcccttcaacgaccaaggtatctgcccc
gacattatcatgaacccccacggtttcccctcgcgtatgacagtcggcaagatgatggaa
ctgctctccggaaaagctggtgttctcaacggcaccctcgaatatggaactgcgtttggt
gggtccacggttgaagacatgtcacaaattcttgtggagaagggcttctcgtacactggc
aaagactacctgacgagtggtatcacgggagaagcacatcagttctacaccttctttggc
ccgatctactaccagaagctcaagcatatggtgcaggataagatgcactcgcgtgctcga
ggtccgcgtgctatcttgacgaggcagcctaccgaaggtcgtgcgagggacggtggactg
cgtctgggtgagatggaacgtgattgtttgattgcatacggtgcttctcagctgctgctt
gagcgattgatgatcagttcggatgcgcacaatgttgatgtttgcgagaagtgcggccaa
atgggctacagcggctactgtaaactctgcgaaagtgaaaaggcagtccgcaagatcact
atgccatatgctgctaagcttctgattcaggaactgggtagcatgaatgtcaaggtgacg
attggattggaggatgaattccctagggatgcgtag
DBGET
integrated database retrieval system
