KEGG   Apteryx mantelli mantelli (North Island brown kiwi): 106484453
Entry
106484453         CDS       T04298                                 
Symbol
POLR2D
Name
(RefSeq) RNA polymerase II subunit D
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
aam  Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03020  RNA polymerase
aam03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106484453 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    106484453 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aam03021]
    106484453 (POLR2D)
   03400 DNA repair and recombination proteins [BR:aam03400]
    106484453 (POLR2D)
Transcription machinery [BR:aam03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106484453 (POLR2D)
DNA repair and recombination proteins [BR:aam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106484453 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 Rop
Other DBs
NCBI-GeneID: 106484453
NCBI-ProteinID: XP_013798104
UniProt: A0A8B7IIK4
LinkDB
Position
Un
AA seq 138 aa
MDFFIHALPYFMLVFTHSCEEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEVFMKT
LNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEGRFED
EELQQILDDIQTKRSFQY
NT seq 417 nt   +upstreamnt  +downstreamnt
atggactttttcatccatgctttaccttattttatgctggtgttcactcattcatgtgaa
gaatttgaaactgcggaaactcttctgaattcagaagtacatatgcttcttgagcatcgc
aagcaacagaatgaaagtgcagaagatgagcaggagctctcagaagtgttcatgaaaact
ttgaattacacagcccgcttcagccgcttcaaaaaccgtgaaaccattgccagtgttcgt
agtttgctgctccagaaaaagctccataaatttgaattggcatgtttggctaacctgtgt
cctgagacagccgaagaagccaaagctttgattcctagcctcgaaggccgatttgaagat
gaggaattacagcagattcttgacgatattcagacgaaacgcagcttccagtattag

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