Apteryx mantelli mantelli (North Island brown kiwi): 106489148
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Entry
106489148 CDS
T04298
Symbol
CLP1
Name
(RefSeq) cleavage and polyadenylation factor I subunit 1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106489148 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106489148 (CLP1)
Enzymes [BR:
aam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
106489148 (CLP1)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
106489148 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
MMR_HSR1
ATP_bind_1
AAA_16
AAA_22
TniB
AAA_18
CbiA
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
106489148
NCBI-ProteinID:
XP_013803737
UniProt:
A0A8B7IXV0
LinkDB
All DBs
Position
Un
AA seq
425 aa
AA seq
DB search
MADDGGDEKKQVAKFELERETELRFEVEASQTVQLELLTGMAEVFGTELTRNKKFTFDAG
AKVAVFTWHGCTVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEREDERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSL
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDDR
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSMADSPDDNISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatggtggcgatgagaagaagcaagtggccaagtttgagctggaacgggag
acggagctgcggtttgaggtggaggcctcgcagacggtgcagctggagctgctcaccggc
atggcggaggtgttcggcaccgagctcacccgcaacaagaagttcaccttcgacgccggc
gccaaggtggccgtcttcacctggcacggctgcaccgtgcagctcagcgggcgcacggag
gtggcctacgtctccaaggacacccccatgctcctctacctcaacacgcacacggccctg
gagcagatgcggcggcaggcggagcgcgaggacgagcgggggccccgcgtcatggtggtg
ggccccacggacgtgggcaagtcgaccgtgtgccgcctgctgctgaactacgccgtgcgc
ctggggcgccggcccacctttgtggagctggacgtgggccagggctccgtctccatcccc
ggcaccatgggggccctctacatcgagcgcccagccgacgtggaggagggcttctccctc
caggccccgctggtttatcacttcggctccaccacgcccggcaccaacatcaagctctac
aacaagatcacgtcccgcctggccgacgtcttcaaccagcggtgtgaagtgaaccgccga
gcgtcggtaagcggctgtgtcatcaacacgtgcggctgggtgaagggctcggggtaccag
gcgctggtgcatgccgcctccgccttcgaggtggacgtggtggtggtgctggaccaggag
cggctctacaacgagctcaagagggacctgccccactttgtgcgcacggtgctgctcccc
aaatccggtggggtggtggagcgctccaaggacttccgtcgggagtgccgagatgaccgc
atcagggaatatttctacggtttccggggctgcttctacccccacgcctttgacgtcaag
ttctccgatgtcaagatctacaaggtgggggctcccaccatcccggactcctgcctcccc
ctgggcatgtcgcaggaggacaaccagctcaagctggtgccggtgacgccggggcgggac
atggtgcaccatctgctgagcgtcagcatggccgacagccccgatgacaacatctcggag
accagcgtggccggcttcatcgtggtcaccggcgtggacctggagcgtcaggtcttcact
gtgctctcgcccgcccctcgcccgctgcccaagaacttcctcctcatcatggacattcgc
ttcatggacctgaagtag
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integrated database retrieval system
