Apteryx mantelli mantelli (North Island brown kiwi): 106499671
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Entry
106499671 CDS
T04298
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion molecule 1
KO
K06527
vascular cell adhesion molecule 1
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106499671 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
aam04090
]
106499671 (VCAM1)
04091 Lectins [BR:
aam04091
]
106499671 (VCAM1)
CD molecules [BR:
aam04090
]
Proteins
106499671 (VCAM1)
Lectins [BR:
aam04091
]
I-type lectins (Siglecs)
106499671 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
ICAM_N
C2-set
Ig_6
DUF2808
Receptor_2B4
Ig_C17orf99
Ig_4
ICAM1_3_5_D2
Herpes_gE_N
Syndecan
V-set_CD47
C1-set
Motif
Other DBs
NCBI-GeneID:
106499671
NCBI-ProteinID:
XP_013816661
UniProt:
A0A8B7K056
LinkDB
All DBs
Position
Un
AA seq
719 aa
AA seq
DB search
MIKQMERTSQAVIIILYACMSVKAFEMEITPANRIVEQIGETLVLTCNTTGCASPSFSWR
IQTDNPLGGTVSNHGTYSTLTMSPVSIENAHDYLCTVFCGLEKKEKSVKVELYSFPSDPV
IEISTSLVAGEQTTVICKIPDVYPSDHLEVLLKKEEHILLEKNFFEDDSTNTETKIVTYS
FYPTTEDIGKEITCVAKLPIANMDFEPKERVTSQKLNANFGPKNTVITASPSNSAMEGDS
LKLTCVTESNPPPQIVWRRQVADKSVQYLVENNVLSIPHAHFTDSGLYICEVINLVTNKT
EKATVDIVIQGAPNIAEFSIKPSTTVREGENVSIRCSAESNPPPKIVLRRKSDGADMGLY
SEGGILLLPSVTFLSGGDYECVAENKFGKNKSAVALNVEYGPKNTIISVIPAATVKEGET
VTMKCTSSGNPAPVISWKKKTVTGESEKIFKDATLTIKNIESQDLGLYECEAYNQFGKEE
KAVKLLVQAPPKNTTLSVFPSNAVKQGESVAISCTSTGVPAVQITLRKKIGDVITALETQ
GGKYTIGRVQLKDAGTYECVSINELGEESQHIVLDVKVPPQNITVLVHPSENVKEGENVT
ITCSTYSNPPSQMVLKKVHPEKEIILSSVNGTFTLYNVTKNDTGRYLLDVFNEVGNNIKV
IEIAVVGRVEKPDQMMPVIIAFSCVTAIAIPVVAILIYVSRKAKINGSYSLVKALRLKV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacagatggaaagaacaagccaagctgtgataataattttgtatgcatgcatg
agtgttaaagcttttgaaatggagattacacctgccaacagaattgttgagcagattgga
gaaacactcgtgcttacatgcaatactactggctgtgcatcaccaagtttttcctggaga
atccaaacggacaacccccttggaggaacagtgagcaaccatgggacatactctaccttg
actatgagtccagttagcattgagaatgctcatgattatctgtgtactgtcttctgtggg
cttgagaagaaagagaagagtgtcaaagttgaactttactctttccccagtgatcctgtc
attgagatcagcacatccttagttgctggggaacaaaccactgtcatctgtaaaattcct
gatgtgtatccttctgatcacctggaagtactcctaaagaaagaagaacatattcttctt
gagaaaaatttttttgaagatgacagcacaaatacagagaccaaaattgtgacatattca
ttttaccccactactgaagatattgggaaagagattacttgtgtggccaagttaccaatt
gctaatatggattttgaacccaaagaaagagtaacttctcagaaactgaatgcaaacttt
ggtcctaaaaatactgtcattactgcatctccaagcaactcagcaatggaaggagactct
ctaaaactcacttgtgtgactgaaagtaatccaccaccacagatagtttggagaaggcag
gtggctgacaaaagcgttcagtatctggtggaaaacaatgtcctttctattcctcatgcc
catttcactgattcaggactgtacatctgtgaagtaattaatctggtgactaataaaaca
gagaaagcaactgtggacattgttatacaaggtgctccaaatattgcagagttctccatt
aagccttctacaacagttcgggaaggagaaaatgtttccatacgatgttccgctgagagt
aaccctcctcctaagattgttttaaggagaaaatctgatggtgcagacatggggctttac
agtgagggaggaattctcctcctgccatctgtgacatttcttagtggaggagactatgaa
tgtgtagcagaaaataagtttgggaaaaataaaagtgcagtagctcttaatgtggaatat
ggaccaaagaatacaatcatctcagtaatccctgctgctactgttaaagaaggagaaact
gtgacaatgaaatgtactagttctggtaatccagctccagtgatctcttggaagaaaaag
acagtcactggggaatctgagaaaatttttaaagatgcgactttaactataaagaatatc
gaaagtcaagatttggggctttatgaatgtgaagcatataaccaatttggcaaagaggaa
aaagctgtgaaattacttgttcaagctcctccaaaaaatacaacactttcagttttccct
tcaaatgcagtgaaacaaggagaaagtgttgccatctcttgcacatctacaggtgttcca
gctgttcagattactctgagaaagaaaataggtgatgtgatcacagcccttgaaacgcaa
ggtggcaaatacaccataggcagggttcagctaaaggatgcgggaacatatgaatgtgta
tccattaatgaactgggagaggagtctcagcacatagtacttgatgtcaaagttcctccc
caaaatattactgttttagtacatccatcagaaaatgttaaagaaggcgaaaatgtcact
attacatgtagcacatacagtaacccaccatcacagatggtcctgaaaaaagtccatcca
gagaaagaaattattctgtcatcagtgaatggaacctttacactctacaatgtcaccaaa
aatgacacaggcagatatttgcttgatgttttcaatgaggttggaaacaacattaaagtg
attgagatagccgttgtaggaagagtggaaaaaccagatcaaatgatgcctgtgattatt
gcattctcttgtgtaacagcaatagcaatacctgtagtcgcgattttgatctacgtgtca
agaaaagcaaagataaatggatcctacagtcttgtaaaagcactgaggctgaaagtgtga
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