Arvicola amphibius (Eurasian water vole): 119801321
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Entry
119801321 CDS
T08327
Symbol
Vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04064
NF-kappa B signaling pathway
aamp04514
Cell adhesion molecules
aamp04668
TNF signaling pathway
aamp04670
Leukocyte transendothelial migration
aamp04933
AGE-RAGE signaling pathway in diabetic complications
aamp05143
African trypanosomiasis
aamp05144
Malaria
aamp05417
Lipid and atherosclerosis
aamp05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
119801321 (Vcam1)
04668 TNF signaling pathway
119801321 (Vcam1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119801321 (Vcam1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
119801321 (Vcam1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
119801321 (Vcam1)
05143 African trypanosomiasis
119801321 (Vcam1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
119801321 (Vcam1)
05418 Fluid shear stress and atherosclerosis
119801321 (Vcam1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
119801321 (Vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
aamp04090
]
119801321 (Vcam1)
04091 Lectins [BR:
aamp04091
]
119801321 (Vcam1)
CD molecules [BR:
aamp04090
]
Proteins
119801321 (Vcam1)
Lectins [BR:
aamp04091
]
I-type lectins (Siglecs)
119801321 (Vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
C2-set
Ig_2
V-set
C2-set_2
ICAM1_3_5_D2
Ig_4
Ig_5
ICAM_N
Adhes-Ig_like
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
119801321
NCBI-ProteinID:
XP_038167786
LinkDB
All DBs
Position
14:complement(25671538..25690093)
Genome browser
AA seq
736 aa
AA seq
DB search
MPEKMVTISGASTVLWILFAASQAFEVEISPTYRTMAQIGSSMSLTCKATGCVSPSFSWR
TQIDSPLSAKMWKNETASTLTMDPVSFENEHFYVCTVYCGSVKLERGTQVDIYSFPKDPE
IQMSGPLEVGKPVMVKCLASDVYPSDRLEMELFKGDQLLKTEMFIEEMEKKSLETKSLEF
TFTPGLEDIGKALVCRAYLHIEPEPQQREKANKLQVYTSPKNTVISVHPSRSLREGDAVT
MTCSSEGLPAPEIFWSKKLDNGNLQLLSGNATLTLVAMRTEDSGNYVCEGVNLVGRNKAE
VELTVQEKPLTVDISPGSWVAAQVGDSVVLTCAVVGCDSPTFAWRTQINGSLNGEVRRKG
ATSTLTLSPVSLEHENSYLCSVTCARRKLEKEVRVEVYSFPEDPAIEISGPLVHGKPVIV
NCTVPNVYPFGHLEIELLKGETTLKSQHFYEEMGIKSLETKSLEMTFIPTSEDTGNVLVC
LAKLHSGEMESEPKQRQSTQTLYVHVAPKETTIWVSPSPVLEEGSPVNLTCSSDGFPAPK
ILWSRQLNNGELQPLSEDTILTLVSTKPEDSGIYVCQGINQAGISKKTVELIIQGSPKDI
QLTAFPSESVKEGDTVIISCTCGSAPETWIILKKKAKTGDMVLKSVDGAYTIRKAQLQDA
GVYECESKTEVGSQLRSLTLDVKGRENDQNYFSPEFLALYCASSLIIPAIGVIIYFARKA
NMKGSYSLVEAEKSKV
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagaagatggtcacgatctctggagcctcaacggtactttggatactgtttgca
gcctctcaagcttttgaagtcgagatctcccctacatatagaacgatggctcagattggg
agctccatgtccctgacttgcaaagccacaggctgtgtgtccccatctttctcttggaga
acccagatagacagtccgctcagtgcgaagatgtggaaaaatgagacggcgtccaccctg
accatggatcctgtcagttttgagaatgaacacttttacgtgtgcacagtatattgtgga
tcagtgaaactggaaagagggacccaggtggacatctactcattccctaaggatccagaa
attcagatgagtggtcccctggaggttgggaagcctgtcatggtcaagtgtttggcctct
gatgtttacccatctgacagactggaaatggaactcttcaaaggtgaccaactcctgaag
acagaaatgtttatagaagagatggagaagaagtctctggaaaccaagagtttggaattc
acctttactcctggccttgaggatattgggaaagctcttgtttgccgagcttacttacac
attgagcccgagccccaacaaagggagaaggccaacaaactgcaagtctacacctctccc
aagaatacagttatctctgtacatccctccagaagtcttcgagagggtgacgctgtgaca
atgacatgttccagtgagggtctaccagctcccgagattttctggagcaagaaattagat
aacggaaatctgcagctcctctcaggaaatgcaactcttaccttagttgctatgagaacg
gaagattctggaaattacgtgtgtgaaggagttaatctggttgggagaaataaagcagag
gtggaattaactgttcaagagaaaccattaactgttgacatctcccccggatcctgggtg
gctgcgcaggttggagactcggttgtactgacatgcgctgttgttggctgtgactccccc
acttttgcttggaggactcagataaacggctcccttaacggggaggtgaggaggaagggg
gccacatccacactgacactgagccccgtgagcctcgagcatgaaaactcttacctgtgc
tctgtgacctgtgctcggaggaaactggaaaaggaagtccgggtggaggtctactcattc
cccgaagacccagcaattgagatcagtgggccccttgtgcacgggaagcctgtcatcgta
aactgcacagtccctaacgtgtacccttttggccatctggagattgaattactgaagggg
gagaccacactgaagagtcaacatttttatgaggaaatgggcataaaatccttagagacc
aaaagtttggaaatgaccttcatccccaccagtgaagatactgggaacgtgcttgtttgc
ctggctaagttacacagtggcgaaatggaatctgaacccaaacaaaggcagagtacacag
actctttacgtccatgttgcccccaaggaaaccaccatctgggtcagcccctctcctgtc
ctagaggagggcagtcccgtgaacctcacctgctcaagcgatggctttccagctccaaaa
atcctgtggagcaggcagctgaataacggggaattgcaacctctttctgaagatacaata
ctcaccttagtgtctacaaaaccggaagattctggcatttatgtgtgccaagggattaac
caggctggaattagcaaaaaaacagttgaactgattatccaaggctctccgaaagatata
caactcacagcctttccctctgagagcgtgaaggagggagacactgtcattatctcctgc
acatgtggaagcgcgcctgaaacgtggatcatcctgaagaagaaagccaagacgggagac
atggtattgaagtccgttgacggcgcgtacaccatccgcaaggcccagctccaggacgct
ggagtgtacgagtgtgaatctaaaaccgaagtgggctcacagttacgaagtttaaccctt
gatgtaaaaggaagagaaaatgaccagaactatttttctcctgagttccttgctctctac
tgcgcctcctccttgatcatacctgccatcggagtgatcatttacttcgcaagaaaagcc
aacatgaaaggatcgtacagcttggtagaagcagagaaatcaaaggtgtag
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