Arvicola amphibius (Eurasian water vole): 119806723
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Entry
119806723 CDS
T08327
Symbol
Msh6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp01524
Platinum drug resistance
aamp03430
Mismatch repair
aamp05200
Pathways in cancer
aamp05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119806723 (Msh6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119806723 (Msh6)
09162 Cancer: specific types
05210 Colorectal cancer
119806723 (Msh6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
119806723 (Msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119806723 (Msh6)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119806723 (Msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Arb1
Motif
Other DBs
NCBI-GeneID:
119806723
NCBI-ProteinID:
XP_038174573
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All DBs
Position
2:complement(113851831..113872091)
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AA seq
1359 aa
AA seq
DB search
MSRQSTLYSFFSKSPALGDTKKAAAGALREGGAAAVPGASASRGRDAAWSEAGSEPRPAA
VSASSPEAKNLNGGPRRSAAPAVPDSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
RKKGKSVRVHVQFFDDSPTRGWVNKRMLKPYTGSKSKEAQKGGHFYSSKSEILRAMQRAD
EALNKDKMKRLELAVCDEPSEPEEEDETEVQHAAYVSDKSEEDNQSESEELQPKVQGPRR
SSRQVKKRRIISDSESDIGGSDVEFKPDTKQEGSSDEMSSGVGDSDSEDLGTLAKGAPKR
KRAMAGHGAFRRKSSRKETSSATKRATRISSETKNTLSAFSAPQNSESQTHISGGGDNNS
GPTIWYHETLEWLKPEKRRDEHRRRPDHPDFNSSTLYVPEDFLNSCTPGMRKWWEIKSQN
FDLVIFYKVGKFYELYHMDAVIGVSELGLVFMKGNWAHSGFPEIAFGRFSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHVSKFDRVVRREVCRIITKGTQTYGVLEGDPSENYSKYLL
SLKEKEEDSSGHTRVYGVCFVDTSLGKFFMGQFSDDRHCSRFRTLVAHYPPVQILFEKGN
LSTETKTVLKGSLSSCLQEGLIPGSQFWDATKTLRTLLEEGYFTGKLNEDSGVVLPRVVK
SMTSGSDSIGLTPGENSELALSALGGCIFYLKKCLIDQELLSMANFEEYFPLDSKMVTTV
RPGAVFTKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCA
PLCSPCAISDRLDAVEDLMALPDKITEVTDLLKKLPDLERLLSKIHNIGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGLMEDVADDFKSKTLKQVVTLQTKSPEG
CFPDLSTELNRWDTAFDHEKARRTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRS
RLGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPEIL
LPREDRHPFLELTGSRHPCITKTFFGDDFIPNDILIGCEEEENGKAYCVLVTGPNMGGKS
TLIRQAGLLAVMAQMGCYVPAEVCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASIL
RHATVHSLVLVDELGRGTATFDGTAIANAVVKELAETVKCRTLFSTHYHSLVEDYSKNVS
VRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNVARLANLPEEVIQKGHRKAR
EFEKMNQSLRLFREVCLASEKPTLEAEAIHRLLALIKEL
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacaaagcaccctgtacagcttcttttccaagtccccggcgctcggcgacacc
aagaaggccgcggccggggccttacgcgaaggaggcgccgccgccgtccccggggcctcc
gcttcccgcggcagggatgcggcctggagcgaggctggatccgagccccggcccgcggcg
gtgtccgcctcgtcgcccgaggcaaagaacctcaacgggggaccgcggagatctgccgcg
ccggcggttcccgacagttcttgtgacttttcaccaggtgatttagtttgggctaagatg
gaaggttatccctggtggccttgcctggtttataatcatccctttgatggaacattcatc
cggaagaaagggaaatcggttcgtgttcatgtccagttttttgatgacagtccaacaagg
ggctgggttaacaaaaggatgctaaagccatatacaggttcaaagtccaaggaagcccaa
aagggaggtcatttctacagttcaaagtctgaaatcctgagagcaatgcaacgcgcagat
gaagctttaaataaagacaagatgaagaggcttgagttggcagtgtgtgatgagccttca
gagccagaagaggaggacgagacagaggtacagcatgcagcttatgtatccgataagagt
gaagaggataatcaaagtgaaagtgaagaactgcagcctaaggtgcaggggcctaggcga
agcagtcggcaagtaaaaaagcgaaggatcatatcagattctgagagtgacattggtggc
tctgatgtagaattcaaaccagacactaagcaagaaggaagcagcgacgaaatgagcagt
ggagttggagacagtgatagtgaggacctgggcacccttgccaaaggtgctccaaagcgg
aagagagcgatggctggtcacggcgcatttagaaggaaaagttcaaggaaggaaacatcc
tcagccaccaaacgagcgactcgaatttcatcagaaaccaagaataccttgagtgctttc
tctgcccctcaaaattctgaatcccaaacccatattagcggaggaggtgataacaatagt
gggcccactatttggtatcatgaaactttagaatggcttaagccagaaaagagaagggat
gagcacaggagacggcctgatcaccctgattttaattcttccacactgtatgtgcctgaa
gatttccttaattcttgtactccagggatgaggaagtggtgggaaattaagtctcagaac
tttgatcttgttattttttataaggtggggaagttttacgaattgtatcacatggatgct
gttattggagtcagtgagctgggactagtattcatgaagggcaactgggcccattctggt
tttccggaaattgcatttggccgattttccgattccttggtgcagaagggctataaagta
gctcgagtggaacagactgagactccagaaatgatggaagcgcgatgccggaagatggca
cacgtgtctaagtttgacagagtggtgagaagggaggtttgtaggatcattaccaagggc
acacagacgtatggtgtgctggaaggtgatccctctgagaactacagtaagtaccttctg
agtcttaaagagaaagaggaagattcttctgggcacactcgtgtatatggtgtgtgcttt
gttgacacttcactgggcaagtttttcatgggtcagttttcagatgatcgccattgttcc
agatttaggactcttgtggcacactatcctccagtacaaattttgtttgagaaaggaaat
ctctcaacagaaaccaaaacagttctgaaaggttctttgtcctcttgtcttcaggagggt
ctgataccaggttcccaattttgggatgctactaagactctgagaacactccttgaagaa
gggtattttactgggaagttaaatgaagacagtggtgtagtactgcccagggtagttaaa
agtatgacctcagggtcagattctattggcctgacaccaggagagaatagtgaattggcc
ctctctgctctaggtggttgtattttctacctcaaaaaatgcttgattgatcaggagctt
ctatcaatggctaattttgaagaatattttcccttggattctaaaatggtcaccacagtc
agacctggtgctgtctttactaaagccaatcagcgaatggtgctagatgcagtgacatta
aacaacttggagattttcctgaatgggacaaatggttctactgaagggactttgctagag
aggcttgatacttgtcatactccctttggcaagcggctcctaaaacaatggctttgtgcc
cccctctgtagcccttgcgctataagtgaccgcttagatgctgtggaagatctgatggct
ttgcctgacaaaatcactgaagttacagacctcctaaagaagctaccagatcttgagagg
ctactgagtaagatccataatattggatctcccctaaaaagccagaaccacccagacagc
agggctataatgtatgaagaaaccacatacagcaaaaaaaagatcattgattttctttct
gctctagaaggattcaaagtaatgtgtaagattatagggcttatggaggatgttgctgat
gattttaagtctaaaacccttaagcaggttgtcactctacagacaaaaagtcctgaaggc
tgctttcctgatctgagcacagagctgaaccgatgggatactgcttttgaccacgagaag
gctcggaggactggactcattactccaaaggcaggatttgactctgattatgaccaagca
cttgctgacataagagagaatgaacagagtctcctggagtacttagataaacagcgcagt
cggcttggatgcaggaccatagtctactggggaattggtaggaaccgttaccagttggag
attccagagaattttactacccgcaacctaccagaagaatacgagttgaaatctactaaa
aagggctgtaaacgatactggaccaaaacgattgagaagaagttagctaatcttataaat
gctgaagaacgtagggacgtgtctttgaaggactgcatgaggcggctgttttataacttt
gataaaaattacaaggactggcagtctgctgtggagtgcattgcagtattggatgtcttg
ctgtgcctggctaactatagtcaaggaggagatggtcccatgtgtcgcccagaaattcta
ttaccaagagaagacagacaccccttcctagagcttacagggtcacggcatccctgcatt
accaagactttttttggagatgattttattcctaatgacatcctgataggctgtgaagaa
gaagaaaatggcaaagcctattgtgtgcttgttactggaccaaatatggggggcaaatct
acactcataagacaggctggtctattggctgtaatggcccagatgggttgttatgtacct
gctgaagtgtgtcggctcacaccagtagatagagtgtttactagacttggtgcctcagat
aggataatgtcaggtgaaagtacattttttgttgaactgagtgaaactgccagcatactt
aggcacgcaacagtacattctttggtgcttgtggatgagttaggaagaggtactgcaact
tttgatgggacagcaatagccaatgcagttgttaaagaacttgctgaaaccgtaaagtgt
cgaacattgttttctacacactatcattcattagtagaagactattctaaaaacgtttct
gtgcgtctaggacacatggcttgcatggtagaaaatgaatgtgaggatcccagccaggaa
actattaccttcctctataaattcattaagggagcctgtcccaagagctacggctttaat
gtagcaaggcttgctaatcttccggaggaggttattcaaaagggacacagaaaagcaaga
gaatttgagaagatgaatcagtcattacgactatttcgggaagtttgtctggctagtgaa
aagccgactctagaggctgaagctatccataggttgctggctttgattaaggagttgtag
DBGET
integrated database retrieval system
