Arvicola amphibius (Eurasian water vole): 119811778
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Entry
119811778 CDS
T08327
Symbol
Cacna1h
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04010
MAPK signaling pathway
aamp04020
Calcium signaling pathway
aamp04713
Circadian entrainment
aamp04925
Aldosterone synthesis and secretion
aamp04927
Cortisol synthesis and secretion
aamp04929
GnRH secretion
aamp04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119811778 (Cacna1h)
04020 Calcium signaling pathway
119811778 (Cacna1h)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
119811778 (Cacna1h)
04925 Aldosterone synthesis and secretion
119811778 (Cacna1h)
04927 Cortisol synthesis and secretion
119811778 (Cacna1h)
09159 Environmental adaptation
04713 Circadian entrainment
119811778 (Cacna1h)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
119811778 (Cacna1h)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aamp04040
]
119811778 (Cacna1h)
Ion channels [BR:
aamp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119811778 (Cacna1h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
119811778
NCBI-ProteinID:
XP_038181719
LinkDB
All DBs
Position
4:89997906..90055027
Genome browser
AA seq
2373 aa
AA seq
DB search
MTEGTLAADEVRVPLGASPPVPAAPARASPASPGAPGREEQRGSGSGVLAPESPATECGA
DLGADEEQPVPYPALAATVFFCLGQTTRPRSWCLRLVCNPWFEHISMLVIMLNCVTLGMF
RPCEDVDCRSERCSILEAFDDFIFAFFAVEMVIKMVALGLFGQKCYLGDTWNRLDFFIVM
AGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV
FFIFGIVGVQLWAGLLRNRCFLDSTFVRNNNLTFLRPYYQTEEGEENPFICSSRRDNGMQ
KCSHIPNRRELRVQCTLGWEAYGQPQTEDGGAGRNACINWNQYYNVCRSGEFNPHNGAIN
FDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIAT
QFSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLKYVGHIFRKVKRRSLRLYA
RWQSRWRKKVDPSSTLHGQGPGRRPRRPGRRTASVHHLVYHHHHHHHHHYHFSHSGPRRP
SPEPGAGDTRLVRACVPPSPPSPGHGPPDSESVHSIYHADCHVEGPQERARVARSIATAA
SLKLASGLGTMNYPTILPSGTVNSKGATSPRFKGLRGAGTPGPATRSPQSLGSPSPYEKI
QHVVGEQGLGRASSHLSGLSVPCPLPSPQAGTLTCELKSCPYCASALEDPEFDFSGSESG
DSDAHGVYEFTQDVRHGDCRDPVQQPNEVDTPGRGSDRRRPPRRPASEPGGLGRLWASFS
GKLRRIVDSKYFNRGIMAAILVNTLSMGVEYHEQPDELTNALEISNIVFTSMFALEMLLK
LLACGPLGYIRNPYNIFDGIVVVISVWEIVGQADGGLSVLRTFRLLRVLKLVRFLPALRR
QLVVLMRTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDSGDTVPDRKNFDSLLWA
IVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGD
ATRSDTDEDKTSTHLEEDFEKLRDLQATEMKMYSLAVTPNGHLEGRGSLPPPLITHTAAT
PMPTPKSSPHLDVAHVLLDPQHSSSGPVDPQLGDQKSPTSLRSSPCTPWGPNSAGNSRRS
SWNSLGRAPSLKRRSQCGERESLLSGEGKGSTDDEAEDGRPGTGAHPEASPGPRATPLRR
AESLDHRSTLDLCHSPRPSALLPTKFHDCNGQVVALPSEFFLRIDSHKEDVAEFDDDIED
SCCFRLHKVLEPYAPQWCRSRESWALYLFPPQNRLRISCQKVIAHKMFDHVVLAFIFLNC
VTIALERPDIDPGSTERAFLSVSNYIFTAIFVVEMMVKVVALGLLWGEHAYLQSSWNVLD
GLLVLVSLVDIIVAMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLR
PIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGSDTRNITTKAECHAAHYRWVRRKYNFD
NLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLLIVSFFVLN
MFVGVVVENFHKCRQHQEAEEARRREEKRLRRLERRRRKAQRRPYYADYSQTRRSIHSLC
TSHYLDLFITFIICLNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAALKLVAFGFR
RFFKDRWNQLDLAIVLLSIMGIALEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATG
MRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSRHATFTNF
GMAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLSYLPALSPVYFVTFVLVAQFVLVNV
VVAVLMKHLEESNKEAREDAEMDAEIELEMAQGSAAQPPSVAQQLSAPQESPGTQPDSPN
LLVVRKVSVSRMLSLPNDSYMFRPVAPAIVPHPHPLQEVEMETYAGSVPSGPVTSAHSPP
LEPRASFQVPSAASSPARASDPLRALSPRGTPRSLSLSRILCRQEAMHTESLEGQVDDAG
EENIPDHTEPAENTSTRQVPLGSLRSPPCSPRPASVRTRKHTFGQRCISSRPPTLGGDEA
EAADPADEEVSHITSSAHPWSATEPHSPEASPTASPAAKGAVGSGRDPRRFCSVDAQSFL
DKPGRADVQRWPSVELDSGDSHLESGEGRGRASELEPALGARRKKKMSPPCISIEPPAED
EGSSRPSAADGGNTTLRRRTPSCEAALHRDCPEFTEGPGAGGDAVAKGERWGQASCRAEH
LTVPNFAFEPLDKGGPGGDSFLDSDQSVTTEPRISLSGAIVPLVHHETEPSVPSGDLPEK
GQGLYLTVPQAPLKKPGSPPATPAPDDSGDEPV
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagggcacgctggccgcggacgaggtccgggttcccctgggcgcttcgcctccg
gttcctgcagcgccggcgagggcttccccagcgagccctggggcgccggggcgcgaggag
cagcgaggatccgggtccggcgtgttggctcccgagagcccagcgaccgagtgtggtgcg
gacctgggcgccgacgaggaacagcccgtcccatacccggcactggcggccacggtcttc
ttctgccttgggcaaaccacgcggccgcgcagctggtgcctccgactggtttgtaacccg
tggttcgagcacatcagcatgctggtcatcatgctgaactgtgtgacgcttggcatgttc
cggccctgcgaggatgttgactgccgctcagagcgttgcagcatcttggaggcctttgac
gacttcatctttgccttcttcgctgtggagatggttatcaagatggtggctttggggctc
tttgggcagaagtgctatctgggtgacacctggaacaggctggacttcttcattgtcatg
gcgggcatgatggagtattctttagacggacacaacgtgagcctctctgccatccgcacg
gtgcgtgtgctgcggcccctccgcgccatcaatcgggtccccagcatgcggatcctggtc
actctgctgctggacacgctgcccatgcttgggaatgtccttctcctctgcttcttcgtc
ttcttcatcttcggcattgttggggtccagctctgggctggcctgctgcggaaccgctgc
ttcctggacagcaccttcgtcaggaacaacaacctgaccttcctgcgcccatactaccaa
acagaagagggtgaggagaaccctttcatctgttcctcacgccgcgacaacggcatgcag
aagtgctcgcacatccccaaccgtcgtgagcttcgtgtgcaatgcactcttggctgggag
gcctacgggcagccacagactgaggatgggggtgctggccgcaatgcctgcatcaactgg
aaccagtattacaacgtgtgccgctcaggggaattcaaccctcacaacggcgccatcaac
tttgacaacatcggctatgcttggatcgccatctttcaggtcatcaccctggagggctgg
gtggatatcatgtactacgtcatggatgcccactcgttctacaacttcatctacttcatc
ctcctcatcattgtgggctccttcttcatgatcaacctgtgcctggtggtgatagccacg
cagttctcggagacaaagcagagggaaaaccagctgatgcgtgaacagcgggcccgctat
ctgtccaacgacagcactctggccagcttctcggagcccggcagctgctatgaggagctc
ctcaagtatgtgggccacatcttccgcaaggttaagcgccgtagcctgcgcctttacgcc
cgctggcagagccgctggcgtaagaaggtggaccccagcagcaccctgcatggccaaggc
cctgggcggcggccacggcggccaggcaggcgcacagcttccgtgcaccatctggtttac
caccaccaccaccaccatcatcaccattaccacttcagccacagtggcccacgccggccc
agcccagagccgggtgctggtgacaccaggttggtccgggcctgtgtgcccccgtcgcca
ccatccccaggccatgggccgccagactctgaatctgtgcacagtatctaccatgctgac
tgccatgtggaggggccgcaggagagagcccgggtggcacgctccatagccactgctgcc
agtctcaagctggcctcaggtttgggcaccatgaactaccctaccatcctgccctcagga
acagtcaacagcaaaggtgccaccagcccacgcttcaaggggctccggggtgccggaacc
ccgggtcctgcaactcgaagtcctcagagcctgggcagccccagcccctacgagaagatc
cagcatgtggttggggaacaaggactaggccgagcctctagccacctgtccggcctgagt
gtgccctgccccctgcccagcccccaggcgggcacgctgacctgtgagctgaagagctgc
ccatattgtgccagcgccctggaggaccctgagtttgacttcagtggctcagagagtgga
gactcagatgcccatggagtctatgagtttacacaggatgtgcgacatggggattgccga
gaccctgtgcagcagcccaatgaagtggacacgccaggtcgtggcagtgacaggcggcgg
ccaccacggcggccagcctcagagccaggagggctaggccgcctctgggcttccttcagt
ggcaagctgcgtcgcatcgtagacagcaagtacttcaacaggggcatcatggctgccatc
cttgtcaacactctgagcatgggcgtggagtatcacgagcagcctgatgagctgaccaat
gccctggagataagcaatatcgtgttcaccagcatgtttgccctggagatgctgctgaag
ctgctggcctgtggcccactgggctacatccggaacccctacaacatcttcgacggcatt
gtggttgtcatcagcgtctgggagatcgtggggcaggcggatggtggcctgtcggtgctc
cgcacgttccggctgctgcgggtgctgaagctggtgcgtttcctgccggccctgcggcgg
cagctggtggtgctcatgaggaccatggacaacgtggccaccttctgcatgctgctcatg
ctgttcatcttcatcttcagcatcctgggaatgcacctctttggctgtaagttcagcctg
aagacagactctggagacacggtccctgaccggaagaacttcgactccctgctgtgggcc
atcgtcactgtgttccagatcctgacgcaggaagactggaacgtggtcctctacaatggc
atggcctccacctcctcctgggcagccctttacttcgtggccctgatgacctttgggaac
tacgtgctcttcaacctgctggtagccatcctggtggaaggcttccaggcagagggggat
gccaccaggtctgacacggatgaggacaagacatctacccacttagaggaagattttgag
aagctcagagatcttcaggccacagagatgaagatgtactcactggctgtgacccctaac
gggcacctagagggccggggtagtctaccgcctcctctcatcacgcacacagcggctacg
cctatgcccactcccaagagctccccacacctggatgtggcccatgttctcctggaccca
cagcacagcagcagtggtcctgtggacccccaactgggggaccagaagtctccgaccagc
ctccgcagttccccctgtaccccgtggggccccaacagcgctgggaacagccgccgctcc
agctggaacagcctgggccgcgcacccagcctcaaacgccgcagccagtgtggggagcgc
gagtcgctgctctccggtgagggaaagggcagcacagatgacgaggccgaggacggcaga
ccaggcacgggagcccacccagaagcctcgccggggccccgtgccacccctctgaggcgg
gccgagtcactggaccaccgcagcactctggacctgtgtcacagcccgcggccctctgcc
ctcctacctaccaagttccacgactgcaacgggcaggtggtggccctgcccagcgagttc
ttcctgcgcatcgacagccacaaggaggacgtggccgagtttgatgatgatatagaggat
agctgctgcttccgcctacacaaagtgctagaaccctatgcgccccagtggtgtcgcagc
cgggagtcctgggccctgtacctcttcccaccacagaacaggctgcgcatctcctgccag
aaggtaatcgcacacaagatgtttgaccatgtggtccttgccttcatcttcctcaactgc
gtaaccattgccctggagaggccagacattgacccaggcagcaccgagagggccttcctc
agcgtctccaactacatcttcacagccatcttcgtggtagagatgatggtgaaggtggta
gccctgggactgctgtggggtgaacacgcctacctgcagagcagctggaatgtcttggat
gggcttcttgtcctggtatccctggttgacattatcgtggccatggcctcagctggcggt
gccaagatcctaggcgttctgcgtgtgctgcgcctgcttcgaaccctgcggcctttgagg
gtcatcagccgagctccaggcctcaagctggttgtagagactctgatatcatcgctcagg
cccattgggaacatcgtcctcatctgctgcgccttcttcattatctttggcatcctcggg
gtgcagctttttaagggcaaattctactactgcgagggctcggataccaggaacatcacc
accaaggccgagtgccacgctgcccactaccgctgggtgaggcgcaagtacaactttgac
aacctgggtcaggcgctgatgtccctgtttgtgctgtcgtccaaggatggctgggtgaac
atcatgtatgatgggcttgacgctgtgggcattgaccagcagcccgtgcagaaccacaac
ccctggatgctgctgtacttcatctccttcctgctcatcgtcagcttcttcgtgctcaac
atgttcgtgggcgtggtggtggagaacttccacaagtgccgccagcatcaggaggctgag
gaggcgcggcggcgtgaggaaaagcggctgcggcgcctggagaggaggcgcaggaaggcc
cagcgccggccctactacgcggactattcacagacgcgccgctccatccactcgctgtgc
accagccactacctggacctcttcatcaccttcatcatctgcctcaatgtcatcaccatg
tccatggagcactacaaccagcccaagtccctggatgaggccctcaagtactgcaactac
gtctttaccatcgtcttcgtctttgaggccgcgctgaagctggtggcctttgggttccgg
aggttcttcaaggacaggtggaaccagctggacttggccatagtcctcctgtccatcatg
ggcattgcgctggaggaaattgagatgaatgctgccctgcccatcaaccccaccatcatc
cgcatcatgcgcgtgcttcgcatcgcccgtgtgctgaagctactgaagatggccacaggc
atgcgtgccctgctggatactgtggttcaagctctgcctcaggtagggaacctcggtctt
cttttcatgctcctgttttttatctatgctgccctgggagtggagctgttcgggaggctg
gagtgcagcgaggacaatccctgtgagggcctgagcaggcacgccaccttcaccaacttc
ggcatggccttcctcacactgttccgagtgtccactggggacaactggaatgggatcatg
aaggacactctgcgtgaatgcgcccgcgaggacaagcactgcctcagctacctgcctgcg
ctctcgccggtctacttcgtcacctttgtgctggttgcccagttcgtgttggtcaatgtg
gtggtggctgtgctcatgaagcacctggaggagagcaacaaagaggcccgagaggacgcg
gagatggacgcggagattgagctggagatggctcaggggtctgcagcccagcccccgtct
gtagcacagcagctgtctgcaccacaggaaagcccgggtacccagccagactctccaaac
ctcctggtcgtgcgcaaagtgtccgtgtccaggatgctgtccctgcccaatgacagctac
atgttccggccggtggctcccgccatcgtcccacaccctcacccgctgcaggaagtggag
atggagacctatgctggtagtgtcccttcgggcccagtcacctctgctcactcaccgccc
ctggagccccgtgcctccttccaggtcccatcagctgcatcctccccagccagggccagc
gatccccttcgtgccctttcaccccgaggtacaccccgctctctgagcctctcacggatc
ctctgcagacaggaggccatgcacaccgagtccctggaaggtcaggttgatgatgctgga
gaagagaacatcccagaccacacagagcctgccgaaaatacctccacgaggcaggtgcct
ctggggtccctgcggtcccctccctgctccccaagacctgccagtgtccgtactcgcaag
cacactttcgggcagcgctgcatctccagccgccctcccaccttgggaggcgatgaggcg
gaagcagcggacccagcggatgaggaggtcagccacatcaccagctcagcccacccctgg
tcggccacagagccccacagcccagaggcctccccaacagcctcccctgctgccaaaggt
gcggtgggcagtgggcgggacccacgcaggttctgcagtgtagacgctcagagcttcctg
gacaaaccaggtagggcagatgtccagcggtggccctctgtggaactggatagtggagac
agtcacctggagtccggggaggggaggggccgggcctcagagctcgaaccagctcttggt
gcacgaaggaagaagaaaatgagccctccctgcatctccatcgaacctcccgctgaggat
gagggctcctcccggccgtctgcagctgacggtggcaacactaccctgaggcgccgaacc
ccatcctgcgaggctgccctccacagggactgccccgagttcacagagggcccaggcgct
ggaggggatgctgtagccaagggtgagcgctggggccaggcctcctgccgggcagagcac
ctgaccgtccccaactttgcctttgagcctctggacaaggggggacctggtggagactct
ttcttggacagtgaccaaagcgtgaccacagaacccagaatttctttgtcgggggctata
gtgcctcttgttcaccatgaaactgaaccttctgtgccctctggcgaccttccagagaag
ggacaaggactgtacctcactgtgccccaggcccccttgaagaaaccagggtctccccca
gccacccctgcccccgatgacagcggagatgagcctgtgtag
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integrated database retrieval system
