Arvicola amphibius (Eurasian water vole): 119812588
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Entry
119812588 CDS
T08327
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04721
Synaptic vesicle cycle
aamp04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
119812588 (Slc6a4)
04721 Synaptic vesicle cycle
119812588 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aamp02000
]
119812588 (Slc6a4)
Transporters [BR:
aamp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
119812588 (Slc6a4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
119812588
NCBI-ProteinID:
XP_038183270
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Position
4:complement(44328413..44348075)
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AA seq
629 aa
AA seq
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METTPLNSQKVLSACKDKEDCQGNGVLQKGVPTPGDRPEPGQISNGYSADPSTSADEATH
SIPTATTTLVAEIRQGERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLLPY
TIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIIA
WALYYLISSFTDQLPWTSCKNSWNTGNCTDYFSQDNVTWTLHSKSPAEEFYLRHVLQIHQ
SKGLQDLGTISWQLALCILLIFTVIYFSIWKGVKSSGKVVWVTATFPYIILSVLLVRGAT
LPGAWRGVVFYLKPNWQKLLEPGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDA
LVTSVVNCMTSFISGFVIFTVLGYMAEMRNEEVSEVAKDAGPSLLFITYAEAIANMPAAT
FFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLIVVITCVLGSLLTL
TSGGAYVVTLLEEYATGPAVLTVALIEAIAVSWFYGISQFCSDVKEMLGFSPGWFWRICW
VAISPLFLLFILCSFLMSPPQLRLFQYNYPHWSIILGYCLGTSSIICIPTYIIYRLISTP
GTLKERIIKSITPETPTEIPCGDIRLNAV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacctttgaattctcagaaggtcctgtcagcatgcaaagacaaagaggac
tgccaaggaaacggtgttctccaaaagggtgtccccaccccaggggacaggcctgagcct
ggccaaatatccaatgggtactctgcagatcccagcaccagtgcagatgaagctacacac
tctatcccaacagccaccaccaccctggtggcggagattcgccaaggggaacgggagacc
tggggcaagaagatggattttctcctgtctgtcatcggctatgctgtagacctgggcaac
atctggcgttttccctacatatgctaccagaatggcggaggggccttcctccttccctac
accatcatggccatctttggggggatcccactcttttacatggagcttgcgctgggccag
taccaccgaaatgggtgcatttctatatggaggaaaatctgcccgattttcaaagggatt
ggctatgccatctgcatcattgccttctatattgcctcctactacaacaccatcattgcc
tgggcgctctactacctcatctcctccttcacggaccagctgccctggaccagctgcaag
aactcctggaacaccggcaactgcaccgactacttctcccaggacaacgtcacctggaca
ctccattccaagtcacctgctgaggagttttacctgcgccacgtcctgcagatccaccag
tctaagggcctccaggacctggggaccatcagctggcagcttgctctctgcatcctactc
atcttcaccgtcatctactttagcatctggaaaggagtcaaatcatctggcaaggtggtg
tgggtgacagccaccttcccttacatcatcctgtctgtcctgctggtgaggggggccacc
cttcctggagcctggagaggggtcgtcttctacctgaaacccaactggcagaaactcttg
gagcctggggtgtgggtggatgctgctgctcagatcttcttctctctcggcccgggcttt
ggggttctcctggcttttgctagctacaacaagttcaataacaactgctaccaagacgcc
ctggtgaccagtgtggtaaattgcatgacgagcttcatttctggctttgtcatcttcacg
gtgcttggctacatggccgagatgaggaatgaagaggtgtccgaggtggccaaagatgca
ggccccagcctcctcttcatcacatacgcggaggccatagccaacatgccagcagccacc
ttcttcgccatcatcttcttcctcatgctaatcacactgggcttggacagcacgtttgca
ggcctggaaggcgtgataacagcagtgctggatgagtttccacacatctgggccaagcgc
cgggagtggtttgtgctcattgtggtcattacttgtgtcttgggatccctgctcacgctg
acttctggaggggcatatgtggtgaccctgttggaagagtacgccaccgggcccgcggtg
ctcactgtggcactcatagaagccattgccgtgtcttggttctacggtatcagtcagttc
tgcagtgatgtgaaggaaatgcttggcttcagcccgggatggttctggaggatctgctgg
gtagccatcagccctctgtttctcctgttcatcctttgcagctttttgatgagtccaccc
caactgcggcttttccaatataattatcctcactggagcatcatcttgggctactgctta
gggacgtcttctattatctgcatccccacgtatatcatttatcggctgatcagcactcca
gggacgctgaaggagcgcatcattaaaagtatcactcctgagacaccaacggaaattccc
tgtggggacatccgcttgaatgccgtgtaa
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