Arvicola amphibius (Eurasian water vole): 119818834
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Entry
119818834 CDS
T08327
Symbol
Grin1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04014
Ras signaling pathway
aamp04015
Rap1 signaling pathway
aamp04020
Calcium signaling pathway
aamp04024
cAMP signaling pathway
aamp04080
Neuroactive ligand-receptor interaction
aamp04713
Circadian entrainment
aamp04720
Long-term potentiation
aamp04724
Glutamatergic synapse
aamp05010
Alzheimer disease
aamp05014
Amyotrophic lateral sclerosis
aamp05016
Huntington disease
aamp05017
Spinocerebellar ataxia
aamp05020
Prion disease
aamp05022
Pathways of neurodegeneration - multiple diseases
aamp05030
Cocaine addiction
aamp05031
Amphetamine addiction
aamp05033
Nicotine addiction
aamp05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
119818834 (Grin1)
04015 Rap1 signaling pathway
119818834 (Grin1)
04020 Calcium signaling pathway
119818834 (Grin1)
04024 cAMP signaling pathway
119818834 (Grin1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119818834 (Grin1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
119818834 (Grin1)
04720 Long-term potentiation
119818834 (Grin1)
09159 Environmental adaptation
04713 Circadian entrainment
119818834 (Grin1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
119818834 (Grin1)
05014 Amyotrophic lateral sclerosis
119818834 (Grin1)
05016 Huntington disease
119818834 (Grin1)
05017 Spinocerebellar ataxia
119818834 (Grin1)
05020 Prion disease
119818834 (Grin1)
05022 Pathways of neurodegeneration - multiple diseases
119818834 (Grin1)
09165 Substance dependence
05030 Cocaine addiction
119818834 (Grin1)
05031 Amphetamine addiction
119818834 (Grin1)
05033 Nicotine addiction
119818834 (Grin1)
05034 Alcoholism
119818834 (Grin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aamp04040
]
119818834 (Grin1)
Ion channels [BR:
aamp04040
]
Ligand-gated channels
Glutamate (ionotropic)
119818834 (Grin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
119818834
NCBI-ProteinID:
XP_038192559
LinkDB
All DBs
Position
7:complement(42817415..42843767)
Genome browser
AA seq
959 aa
AA seq
DB search
MSTMHLLTFALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLMEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTSTGGGRGALQNQKDTVLPRRAIEREEGQLQLCSRHRES
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcacctgctgacattcgccctgcttttttcctgctccttcgcccgcgcc
gcctgcgaccccaagatcgtcaacatcggcgcggtgctgagcacgcgcaagcacgagcag
atgttccgcgaggccgtgaaccaggccaataagcgacatggctcttggaagatacagctc
aacgccacctctgtcacccacaagcccaacgccatacagatggccctgtcagtgtgtgag
gacctcatctccagccaggtctacgcaatcctagttagccacccacctacccccaacgac
cacttcacccccactcccgtctcctacacagctggcttctacagaatccccgttctggga
ttgacgacccgaatgtccatctactctgacaagagcatccacctgagcttcctacggacg
gtgccgccctactcccaccagtccagcgtctggtttgagatgatgcgcgtctacaactgg
aaccacatcatcctgctggtcagcgacgaccacgagggccgggcggcgcagaagcgcctg
gagacattgctggaggagcgcgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgacaacaagcgcggacccaaggccgagaaggtgctgcagttcgaccca
ggaaccaagaacgtgacggctctgctgatggaggcccgggaactggaagccagggtcatc
atcctatctgcgagcgaggacgacgctgccaccgtgtaccgcgcagccgcgatgctgaac
atgacgggctctgggtacgtgtggctggtgggggagcgcgagatctcggggaacgccctg
cgttacgccccagacggcatcatcggactgcagctcatcaacggcaagaacgagtcggcc
cacatcagcgacgccgtgggcgtggtagcgcaggcagtccacgagctgctagagaaggag
aacatcaccgacccgccgcggggttgcgtgggaaacaccaacatctggaagacaggacca
ctgttcaagagggtactgatgtcttccaagtatgctgatggagtgactggccgtgtggaa
ttcaatgaggatggggaccggaagtttgccaactatagcatcatgaacctgcagaaccga
aagctggtgcaagtgggcatctacaatggcacccatgtcatcccaaacgaccggaagatc
atctggcctgggggagagacagagaagcctcgagggtaccagatgtccacgagattaaag
atagtgacaatccaccaagagccctttgtgtacgtcaaacccacactgagtgatgggaca
tgcaaggaggaattcacggttaacggtgacccagtcaagaaggtgatctgcacagggcct
aacgacacatcgccaggcagcccacgccacacggtgcctcagtgctgctatggcttctgc
attgacctgctcatcaagttggcacggaccatgaactttacctacgaggtccacctggtg
gcagatggcaagtttggcacacaggagcgggtaaacaacagcaacaaaaaggagtggaat
gggatgatgggagagctgctcagtggtcaagcagacatgattgtggcacctctgaccatc
aacaatgagcgtgcacagtacatagagttctccaagcccttcaagtaccagggcctgacc
attctggtcaagaaggagattccccggagcacgctggactcgttcatgcagcccttccag
agcacgctgtggttgctagtggggctgtcggtgcacgtggtggctgtaatgctctatctg
ctggaccgcttcagtccgtttggccggttcaaggtgaacagtgaggaggaagaggaggac
gcgctgaccctgtcctctgccatgtggttctcctggggtgtcttgctcaactctggcatc
ggggaaggtgctccccggagcttctctgcacggatcctaggcatggtgtgggctggtttt
gccatgatcatcgtggcttcctatactgccaacctggcagccttcctggtgctggatcgg
cctgaggagcgtatcacaggcatcaatgaccccaggctcagaaacccctcggacaagttc
atctatgcgactgtgaagcagagttctgtggacatctacttccggaggcaggtggagctg
agcaccatgtatcggcacatggagaaacacaactacgagagcgcagccgaggccatccag
gctgtgcgggacaacaagctccatgccttcatctgggactcagcggtgctggagttcgag
gcgtcacagaagtgtgacctggtgacaacgggtgagctgttcttccgctcgggcttcggc
atcggcatgcgcaaggacagcccctggaagcagaatgtttccctgtccatactcaagtcc
catgagaatggcttcatggaagatctggataagacatgggttcggtatcaggaatgtgac
tcccgcagcaatgctcctgcgactctcacttttgagaacatggcaggggtctttatgctg
gtggctggaggcatcgtggctgggatcttcctgattttcatcgagatcgcctacaaaaga
cacaaggatgcccgtaggaagcagatgcagctggcttttgcagcagtgaacgtgtggagg
aagaacctgcaggatagaaagagtggtagagcagagcccgaccctaaaaagaaagccaca
tttagggctatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaagac
acgagcaccgggggtggacgcggcgctttgcaaaaccaaaaagacacagtgctgccgcga
cgcgctattgagagggaggagggccagctgcagctgtgttcccgtcatagggagagctga
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