Arvicola amphibius (Eurasian water vole): 119819233
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Entry
119819233 CDS
T08327
Symbol
Notch1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp01522
Endocrine resistance
aamp04330
Notch signaling pathway
aamp04658
Th1 and Th2 cell differentiation
aamp04919
Thyroid hormone signaling pathway
aamp05020
Prion disease
aamp05165
Human papillomavirus infection
aamp05200
Pathways in cancer
aamp05206
MicroRNAs in cancer
aamp05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119819233 (Notch1)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
119819233 (Notch1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
119819233 (Notch1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119819233 (Notch1)
05206 MicroRNAs in cancer
119819233 (Notch1)
09162 Cancer: specific types
05224 Breast cancer
119819233 (Notch1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
119819233 (Notch1)
09164 Neurodegenerative disease
05020 Prion disease
119819233 (Notch1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
119819233 (Notch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
NOD
Notch
NODP
Ank_4
Ank_5
Ank_3
EGF_3
JAG1-like_EGF2
cEGF
Motif
Other DBs
NCBI-GeneID:
119819233
NCBI-ProteinID:
XP_038193246
LinkDB
All DBs
Position
7:complement(44082559..44128904)
Genome browser
AA seq
2531 aa
AA seq
DB search
MPRLLAPLLCLTLLPALAARGLRCSQPSGTCLNGGRCEVANGTEACVCSGAFVGQRCQDP
NPCLSTPCKNAGTCHVVDHGGTVDYACSCPLGFSGPLCLTPLDNACLANPCRNGGTCDLL
TLTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCLPFESSYICGCPPGFHGPTCRQDVN
ECSQNPGLCRHGGTCHNEFGSYRCACRATHTGPHCELPYVPCSPSPCQNGGTCRPTGDTT
HECACLPGFAGQNCEANVDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCASAACFQGATCHDRVASFYCE
CPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECALGA
NPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGHCMDKINEFLCQCPKGFSGHLCQYDVDECASTPCKNG
AKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYGSCKDGVATFTCLCQPGYTGHHC
ETNINECHSQPCRHGGTCQDRDNSYLCLCLKGTTGPNCEINLDDCASNPCDSGTCLDKID
GYECACEPGYTGSMCNVNIDECAGSPCHNGGTCEDGIAGFTCRCPEGYHDPTCLSEVNEC
NSNPCIHGVCRDGLNGYKCDCAPGWSGTNCDINNNECESNPCVNGGTCKDMTSGYVCTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCPLPYTGATCEVVLAPCATSPCKN
SGVCKESEDYESFSCVCPPGWQGQTCEIDINECVKSPCRHGASCQNTNGSYRCLCQAGYT
GRNCESDIDDCRPNPCHNGGSCTDGINTAFCDCLPGFQGAFCEEDINECASNPCRNGANC
TDCVDSYTCTCPAGFNGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQY
DVNECDSRPCLHGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSAPCKNGGKCWQTNTQ
YHCECRSGWTGFNCDVLSVSCEVAAQKRGIDVTLLCQHGGLCVDEEDKHYCHCQAGYTGS
YCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGANCSEEINECLSQPCQNGGTCID
LTNTYKCSCPRGTQGVHCEINVDDCHPHLDPATRSPKCFNNGTCVDQVGGYSCTCPPGFV
GERCEGDVNECLSNPCDPRGTQDCVQRVNDFHCECRAGHTGRRCESVINGCRGKPCKNGG
VCAVASNTARGFICRCPAGFEGATCENDARTCGSLRCLNGGTCISGPRSPTCLCLGSFTG
PECQFPASSPCVGSNPCYNQGTCEPTSESPFYRCLCPAKFNGLLCHILDYSFTGGAGRDI
PPPPIEEDCELPECQVDAGNKVCNLQCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYF
SDGRCDSQCSSAGCLFDGFDCQQTEGQCNPLYDQYCKDHFSDGHCDQGCNSAECEWDGLD
CAEHVPERLAAGTLVLVVLLPPEQLRNNSFHFLRELSHVLHTNVVFKRDAQGQQMIFPYY
GREEELRKHPIKRSAVGWTTSSLLPGTNGGRQRRELDPMDIRGSIVYLEIDNRQCIQSYS
QCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETVEPPVPSQLHLMYVAAAAFVLLFFV
GCGVLLSRKRRRQHGQLWFPEGFKVSEASKKKRREPLGEDSVGLKPLKNASDGALMDDNQ
NEWGDEDLETKKFRFEEPVVLPDLDDQTDHRQWTQQHLDAADLRMSAMAPTPPQGEVDAD
CMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGET
ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILLRNRATDLDA
RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN
GANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV
RLLDEYNLVRSPQLHGTALGGTPTLSPTLCSPNGYLGNLKSATQGKKARKPSTKGLACGS
KEAKDLKARRKKSQDGKGCLLDSSSMLSPVDSLESPHGYLSDVASPPLLPSPFQQSPSMP
LSHLPGMPDTHLGISHLNVAAKPEMAALAGSSRLTFEPPPPRLSHLPVASSASTVLSTNG
TGAMNFTVGTPASLNSQCEWLPRLQNGMVPSQYNPLRSGVASGTLSTQAAGLQHGMMAPL
HSSLSTNTLSPMIYQGLPNTRLATQPHLVQTQQVQPQNLQIQPQNLQPPSQPHLSVSSAA
NGHLGRSFLGGEHSQADVQPLGPSSLPVHTILPQESQALPTSLPSSMVPPITTTQFLTPP
SQHSYSSSPVDNTPSHQLQVPEHPFLTPSPESPDQWSSSSPHSNISDWSEGISSPPTSMP
SQITHIPEAFK
NT seq
7596 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggcttctggcgcccttgctctgcctaacactgctgcccgcgctcgccgcaaga
ggcttgagatgctcccagccaagtgggacctgcctgaatggagggaggtgcgaagtggcc
aacggcaccgaagcctgtgtctgcagcggagccttcgtgggccaacgatgccaggacccc
aatccgtgcctgagcacaccctgcaagaatgccgggacatgccatgttgtggaccatggt
ggcactgtggattacgcctgcagctgtcccctgggtttctctgggcccctctgcctgaca
cctctggacaatgcctgcctagccaacccctgccgcaatgggggcacctgtgacctgctc
actctcacagaatacaagtgccgctgccccccaggatggtcaggaaagtcatgtcagcaa
gccgacccgtgtgcctccaacccttgtgccaatggtggccagtgcctaccctttgagtct
tcatacatctgtggctgccctcctggcttccatggccccacctgcaggcaagatgttaac
gagtgcagccagaaccctgggctgtgtcgccacggaggcacctgccacaacgagttcggc
tcctatcgctgtgcctgccgtgccacccatacgggtccccactgtgaactgccctatgtg
ccctgcagcccctcaccctgccagaatgggggcacctgccgccctacgggagacaccacc
catgagtgtgcctgcctgccaggctttgctggccagaactgtgaagcaaacgtggatgac
tgtccgggaaacaactgcaagaatgggggtgcgtgtgtggatggcgtgaatacctataat
tgccgctgcccaccggagtggacaggtcagtactgcacagaggatgtggatgagtgtcag
ctgatgcccaatgcctgccagaatggtggaacctgccacaatacacatggcggctacaac
tgcgtgtgtgtcaatggctggaccggggaagactgcagtgagaacattgatgactgtgcc
agtgctgcctgtttccagggagccacctgccatgaccgcgtggcctccttctactgcgag
tgtccacatgggcgcacgggtctgctttgccacctcaacgatgcatgcatcagcaacccc
tgcaacgagggatccaactgtgacaccaaccctgtcaacggcaaggccatctgtacttgc
ccctctgggtacacggggccagcctgcagccaggacgtggatgaatgtgctctgggtgcc
aacccctgtgagcatgcaggcaagtgcctcaacacactgggctcctttgagtgccagtgt
ctacagggctacacggggccccgctgtgagattgatgtcaatgagtgcatctccaacccg
tgtcagaatgatgccacctgcctggaccagattggggagttccagtgtatatgtatgcca
ggttatgagggtgtgtactgtgagatcaacacggacgagtgtgccagcagcccctgcctg
cacaatggccactgcatggacaagatcaacgagttcctgtgtcagtgccccaaaggcttc
agcgggcacctgtgccagtatgatgtggatgagtgtgccagcacaccttgcaagaatggt
gccaagtgcctggacgggcccaacacctacacctgcgtgtgcacggaaggttacacgggg
acccactgtgaggtggacattgatgaatgtgatcctgacccctgtcactatggttcctgc
aaggatggggtggccacctttacctgcctctgccagccaggctacacgggccatcactgt
gagaccaacattaatgagtgccacagccagccatgccgccacgggggcacctgccaagac
cgtgacaactcctacctctgcttatgcctcaagggaaccacaggacccaactgcgagatc
aacttggatgactgtgccagcaacccctgcgactcaggcacctgtctggataagattgac
ggctacgagtgcgcctgcgagccaggctacacagggagcatgtgcaacgtcaacattgat
gagtgtgcaggcagcccctgccacaatgggggtacctgtgaggatggcatcgctggcttc
acctgccgctgccccgaaggctaccacgatcccacgtgtctgtccgaggtcaacgagtgc
aacagcaacccctgcatccacggggtttgccgggatggcctcaatgggtacaagtgtgac
tgtgcccctgggtggagtggaacaaactgtgacatcaacaacaacgagtgtgagtcgaac
ccttgtgtcaacggtggcacctgcaaagacatgaccagtggctacgtgtgtacctgccga
gaaggcttcagtggccctaactgccagaccaacatcaacgagtgtgcctccaacccctgc
ctgaatcaggggacctgcattgatgatgtcgccgggtacaagtgcaactgccctctaccc
tatacaggagccacatgtgaagtggtactggccccatgtgccaccagcccctgcaaaaac
agcggggtgtgcaaggagtctgaggactatgagagcttttcctgtgtctgtcccccaggc
tggcagggtcagacctgtgagattgacatcaatgagtgcgtgaagagtccgtgtcgccac
ggggcctcctgccagaacaccaatggcagttaccgctgcctctgccaggctggctacaca
ggtcgcaactgcgagagtgacatcgatgactgccggcccaacccatgtcacaatgggggt
tcctgcactgacggcatcaacacggccttctgcgactgcctgcctggcttccagggtgcc
ttctgtgaggaggatatcaacgaatgtgccagcaatccctgccgaaatggtgccaactgc
accgactgcgtggacagttacacatgcacctgccccgcgggcttcaatggcatccactgc
gagaataacacacctgactgcaccgagagctcctgcttcaatggtggcacctgtgtggat
ggcatcaactccttcacctgcctgtgcccacccggcttcacaggcagctactgccagtat
gatgtcaatgagtgtgactcacggccctgtctgcacggtggcacctgccaagacagctat
ggtacctataagtgcacctgcccacagggctacactggcctcaactgccagaaccttgtg
cgttggtgcgactcggctccctgcaaaaacggtggcaagtgctggcagaccaacacgcag
taccactgtgagtgccgtagtggctggactggcttcaactgcgatgtgctcagtgtgtcc
tgcgaggtggccgcacagaagcgaggcatcgacgtcaccctcctgtgccagcatggaggc
ctctgtgtggatgaggaggacaagcactactgccactgccaggcgggctacaccggcagc
tactgtgaggatgaggtggacgagtgctcacctaacccgtgccagaatggagccacctgc
actgactacctgggtggcttttcctgcaagtgtgtggctggctatcacggagctaactgt
tctgaggaaatcaacgagtgcctgtcccagccctgccaaaacgggggtacctgcatcgat
ctgaccaacacctacaagtgctcctgtcccagaggcacacagggtgtacactgtgagatc
aatgttgatgactgccatccccaccttgaccctgccactcgaagccccaagtgcttcaac
aatggcacctgtgtggaccaggtgggtggctacagctgcacctgcccaccaggcttcgtc
ggggagcggtgtgagggcgatgtcaatgagtgtctctccaacccctgtgacccgcgtggc
acccaggactgcgtgcagcgggttaacgacttccactgcgagtgccgggctggccacact
ggacgccgctgtgagtcagtcatcaatggctgcaggggcaaaccgtgcaagaatgggggt
gtctgtgccgtggcctccaacaccgcccgcggattcatctgcaggtgccctgcgggtttt
gagggcgccacgtgtgagaatgatgcccgcacctgtggcagtctgcgctgcctcaacggc
ggcacatgtatctcaggcccccgcagtcccacctgcctctgcttgggctccttcactggt
cccgagtgccagtttccagccagcagcccctgtgtgggtagcaacccctgctacaatcag
ggcacctgtgagcccacatccgagagccctttctaccgctgcttgtgccctgccaaattc
aatgggttgctgtgccacatcctggactacagcttcacaggaggtgctgggcgagacatt
cccccgccaccaattgaggaggactgtgagctgcccgagtgccaggtggacgcaggcaac
aaggtctgcaacctccagtgcaacaaccacgcgtgtggctgggatggtggtgactgctcc
ctcaacttcaacgacccttggaagaactgcacacagtccctgcagtgctggaagtatttc
agtgatggccgctgtgacagccagtgcagctcagccggttgcctcttcgatggcttcgac
tgccagcaaacggaggggcagtgcaaccccctgtatgaccagtattgcaaggaccacttc
agtgacggccattgcgaccagggctgcaatagcgccgagtgtgagtgggacggactggac
tgcgcagaacacgtgcccgagcggctggcagccggcacgttggtgttggtggtgctgctt
ccccctgagcagctacgcaacaactccttccacttcctgcgggaactcagccacgtcttg
cacaccaacgtggtcttcaagcgtgacgcgcaaggccagcagatgatcttcccctactat
ggccgcgaggaggagctgcgcaagcatccaatcaagcgctccgccgtgggttggaccacc
tcttctctgcttcccggcaccaatgggggccgccaacgcagggagctggaccccatggac
atccgcggctccattgtctacctggagatcgacaaccggcaatgtatccagtcatactcg
cagtgcttccagagtgccaccgatgtggccgccttcctgggcgcgctggcttcactgggc
aacctcaatatcccctacaagatcgaggctgtaaagagtgagacggtggagcctccggtg
ccctcgcagctgcacctcatgtacgtggcagccgccgcctttgtgctcctgttctttgtg
ggctgtggggtgctgctgtcccgcaagcgccggcggcagcatggccagctctggttccct
gagggcttcaaagtgtcagaggccagcaagaagaagcgaagagagcccctcggcgaggac
tctgttggcctcaagcccctgaagaatgcctcagatggtgctctgatggacgacaatcag
aacgagtggggggacgaagacctggagaccaagaagttccggtttgaggagccagtggtt
cttcctgacctggatgatcagactgaccaccggcagtggacccagcagcacctggatgct
gccgatttacgcatgtctgccatggccccaacaccgcctcagggtgaggtggacgctgac
tgcatggatgttaatgtccgaggaccagatggcttcacacctctcatgatcgcctcctgc
agtggagggggcctcgagacaggcaatagtgaagaagaggaagatgcacctgctgtcatc
tccgacttcatctaccagggtgccagcttgcacaaccagacggaccgcacaggggagacc
gccctgcacctggctgccagatactctcgttcagatgctgccaagcgcttgctggaggcc
agcgcagatgccaacatccaggacaacatggggcgcaccccactgcatgcagctgtttct
gcagatgctcagggtgtcttccagatcctgctccggaaccgagccacagacctggatgcc
cgcatgcatgatggcacaaccccgctgatcctggctgcacgcctggccgtggagggcatg
ctggaggacctcattaactcacatgcagatgtcaatgctgtggacgacctaggcaagtca
gccctgcactgggcagcagcagtgaacaacgtggatgctgcagttgtcctcctgaagaat
ggagccaacaaagacatgcaaaacaacaaggaggagactcccctgttcctggctgcccgt
gagggcagctacgagactgccaaagtgctgctggaccacttcgccaaccgggacatcacg
gatcacatggaccgactgccccgggacatcgctcaggagcgcatgcaccatgacatcgtg
aggctgctggatgagtacaacctggtgcgcagtccgcagctgcacggcacggccctgggt
ggcacgcccacactgtctcccacactctgctcacccaatggctacctgggcaacctcaag
tccgccacccaaggcaaaaaggcccgcaagcccagcaccaaagggttggcctgtggcagc
aaggaagccaaggacctcaaagcacggaggaagaagtcccaggatggcaagggctgcctg
ttggacagctcaagcatgctgtcgcctgtggactccctcgagtcgcctcacggctacttg
tcagacgtggcttctccgcctctcctcccctccccattccagcagtctccatccatgcct
ctcagccacctgcctggtatgcctgacacccacctgggcatcagccacttgaatgtggca
gccaaacctgagatggcagcactggcaggaagcagccggctgacctttgagccgccgccc
ccacgcctctcccacctgcctgtagcctccagtgccagcacagtgctgagtaccaatggc
acaggggctatgaatttcaccgtgggtacacctgcaagcttgaatagccagtgcgagtgg
ctgccccggctgcagaacggcatggtgcccagccagtacaacccactgcgatcaggtgtg
gcgtcgggcacgctgagcacacaggcagctggcctccagcatggcatgatggccccacta
cacagcagcctttccaccaatactttgtccccgatgatctaccagggcttgcccaacaca
aggctggctactcagccccatctggtgcagacccagcaggtgcagccgcagaacttacaa
atccagcctcagaacctgcagccgccatcacagccacacctcagtgtgagctcagcagcc
aatgggcacctgggccggagcttcctgggtggggagcacagccaggcggatgtacagccc
ctgggccccagcagtctgcctgtgcacaccatcctgccccaggagagccaggccctgccc
acatcactgccatcctcgatggtcccgcccataaccaccacccagttcctgacccctcct
tcccagcacagctactcatcctcccctgtggacaacacccccagccaccagctgcaggtg
ccagagcaccccttcctcaccccatcccctgagtcccctgaccagtggtccagctcctcc
ccacattccaacatctctgattggtccgagggcatctccagcccgcccaccagcatgccg
tcccagatcacccacattccggaggcttttaagtaa
DBGET
integrated database retrieval system
