Arvicola amphibius (Eurasian water vole): 119825079
Help
Entry
119825079 CDS
T08327
Symbol
Hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp00780
Biotin metabolism
aamp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
119825079 (Hlcs)
Enzymes [BR:
aamp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
119825079 (Hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
119825079 (Hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
119825079 (Hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
119825079 (Hlcs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
119825079
NCBI-ProteinID:
XP_038201631
LinkDB
All DBs
Position
10:4069234..4233885
Genome browser
AA seq
870 aa
AA seq
DB search
MLITLCYLYLWARWGRRPAALVLATVRRLRASRCSFTFCRAAAQPGGARVCLSRGGRVFC
VGESQSIDDLNKWALFLVSPFVLEAEQIAFVTESIWAQGDSFQKAASSETVVKWSDCCLP
LAFRPGDPHQFIAKASVDNFSKLGVAFMEERLQMDHGLIAQKIVSVHLKDPALKEVSEAS
AEQVQALPLGLDPSLEAEPAQGVMECAGHGDPKATGEGSSLPRRGCASGGEPAADGDPGQ
SSAELHQLHLSSCHECLELENSTIESVRFASAENIPDLPYDHSSSVEDAADELCPEREGR
RVNLSGKAPNILLYVGSSSEEALGRLQQVRATLTDCVDTDSYTLYHLLEDSALRDPWPDN
CLLLVIATREPIPKDIYQKFMAYLSQGGKVLGLSSPFTFGGFQVASKDLLQSTVQNLVFS
KADGSEVRLSVLSSGCVYEEGLSLGKLQGHLENPNKDKMIVHVPFGSRGGEAVLCQVYLE
LPPSTSMVQTQEDFNVLKSSNMRRHEVLKEILTTLGLSCDVRQVPALTPLYLLLAAEEIR
DPFMQWLERCVDPEGIIKSSKLALRFTSSHTSEVEVSPSSLPVVTNPEAFSSEHFDLETY
RQNLQTTWLGKVILFAEVTTTTMSLLDGLMFEMPQEMGLIAIAVRQTQGKGRGPNAWLSP
VGCALFTLLVSIPLRSQLGQRIPFVQHLMSLAVVEAVRSIPEYEEINLRVKWPNDIYYSD
LMKIGGVLVNSTLMGETFYILIGCGFNVTNSNPTICINDLITEHNKQHNAGLKPLRADYL
IARAVTVLERLIDVFQDQGPNGVLPLYYKYWVHSGQQVRLGSTEGPLVSIVGLDDSGFLQ
VHQKGGEVVTVHPDGNSFDMLRNLIVPKRQ
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcacgctatgctacttgtacctgtgggcgcgctgggggcgccggccggccgcc
ttggtgctcgccacggtgcggcggctgcgcgcctcgcgctgttccttcaccttctgccgc
gccgccgcgcagcccgggggcgcgcgcgtgtgcctgagccgcggcggccgcgtcttctgc
gtcggcgagagccagtctattgatgacttgaacaagtgggccctgtttcttgtctccccc
ttcgtacttgaggcagaacaaatagcatttgtgaccgagagcatttgggcacaaggcgac
agtttccagaaggcagcatcttcagaaacggttgtaaaatggtcggactgctgtttgccg
ttagctttccgacccggggatccccaccagttcatagctaaagcaagcgtggacaacttc
agcaagcttggggtggcgtttatggaggagagactccagatggaccatggactgatagcc
cagaagattgtttcagttcacttaaaggaccccgctctgaaggaagtcagcgaggcctcc
gccgagcaggtccaagccctgccactgggcctagacccttcccttgaggctgagcctgcg
cagggtgtcatggagtgtgctggccatggtgacccgaaggctactggtgaaggctcctcc
ctaccgaggagaggctgtgcatctggaggtgagccggctgcagatggtgaccccgggcag
agctctgctgagctccatcagcttcacctgtccagttgccacgagtgtttggaacttgag
aacagtaccatcgaatcagtgaggtttgcatctgcagagaacattccggatcttccctat
gatcacagcagcagcgtagaggacgctgcagatgaactctgccctgaacgggaagggagg
agagtcaacctttcgggaaaggcacccaatatcctgctgtatgtgggctccagttccgag
gaagccctgggccggctccagcaggtacgggctaccctgactgactgcgtggacaccgac
agctacacgctctaccatctgctggaagacagtgctctcagggacccgtggccggacaac
tgcctgctattggtgattgccaccagggaacccatccccaaagacatataccagaagttc
atggcctatctttctcagggagggaaggtgctgggcctgtcttcccccttcacgtttggt
ggctttcaggtggctagcaaggacctgctacagagcacagtccagaacttggtgttctca
aaggctgatgggagtgaggtacggcttagcgtcctgagcagtggctgtgtttatgaggaa
ggcctcagtctgggcaaactgcagggccacctagagaatccaaacaaggacaagatgatt
gttcacgtgccttttggaagccgcggaggagaggccgttctctgccaggtgtacctggaa
ctccctccgagcacttccatggtgcaaactcaagaggacttcaacgtgcttaagtccagc
aacatgaggaggcacgaagtccttaaggagatcctgacgaccctcggcctaagctgtgat
gttcgacaagttcctgccttaactccgctctacttgctgctggccgccgaggaaatccgg
gatccgttcatgcagtggcttgagagatgtgtggatcctgaaggaatcataaagtctagc
aagctcgccctgaggttcacttcctctcacacgtctgaagtggaggtctctccatcttct
ctacctgtggttaccaaccccgaagccttctcatcagagcactttgacctggagacatat
cgccagaatctgcagaccacgtggctcggaaaagtaattctgtttgcagaggtgaccacc
acaaccatgagtctcctggatgggttgatgtttgagatgccacaggaaatgggtttaatc
gccattgctgttcggcagacccagggcaaaggaaggggtccaaatgcctggctgagccct
gtggggtgtgcccttttcaccctgctggtctccattcccctgagatcacaactggggcag
aggattccatttgtccagcatttgatgtccctggctgtcgtggaggccgtgcggtccatc
ccagagtacgaggagatcaacttgcgagtcaagtggcccaacgatatttattacagtgat
ctcatgaaaattggtggagttctggttaattcaacacttatgggagaaacgttctatatc
cttatcggctgtggatttaatgtgactaacagtaacccgaccatctgcatcaacgacctc
atcacagagcacaataagcagcacaatgcaggcctgaagcccttgagagccgattacctc
atagccagggcggtaactgtgctagagagactgattgacgtgtttcaggaccaggggccc
aatggtgtccttcctctctattataaatactgggtgcacagtggtcagcaagtccgcctg
ggcagcaccgagggaccgctggtgtcgatcgtggggcttgatgattccggattcctgcag
gtccaccagaagggtggcgaggttgtgacagtgcatccagatggcaactcctttgacatg
ctgagaaacctcattgtgcccaagcgacagtag
DBGET
integrated database retrieval system
