Anopheles arabiensis: 120902668
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Entry
120902668 CDS
T07381
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
aara
Anopheles arabiensis
Pathway
aara03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120902668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aara03021
]
120902668
Enzymes [BR:
aara01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120902668
Transcription machinery [BR:
aara03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120902668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
HMG_box
DUF5499
Motif
Other DBs
NCBI-GeneID:
120902668
NCBI-ProteinID:
XP_040167559
LinkDB
All DBs
Position
3:90147398..90153331
Genome browser
AA seq
1746 aa
AA seq
DB search
MTIVNLDPTNLEFSVFTTEDVRKISVMKVESYRSFDDMGNPVKSGLYDPAMGPCGFGEIC
ATCTRDVSTCEGHFGLIELDLVVYNPFFMRTVSSLLRITCMSCARVQLQDGAKSLLELQL
RLADAGYIVEAEEIDVYKTKLQANPHDAIPEEITYYEDLLRKEPYNKLGNTKLSSTIRTA
IVNSTLRQESKRCIHCTKMLQRVRITDKKLTIRWTQADKKAFLEEKGNKNPTDEEVKSST
EVVLARESQMFLRKLYEQEGTLLSLLFPVLNSAKHETTQYPTDIFFMEVVPVPPCKMRPV
RRANRVPGRSSVMEHAQSVLLRNIFVANATVRAILLGSEGKEKPEGMSDATFGQLKSIHQ
QAKGATVTEKLFHAWCDLQSNVDQLLDVEKLSGGKQVVTFGLKQLIEKKAGLIRMHMMGK
RVNHAARTVITPDPNIGVEEIGIPTRFAKKLTYPVPVTPWNVAELRQWVMNGPDVYPGAN
MIEDANGRVSKISSTNVTQRQSLAKTLLTPHGAGAESSGDDTIKIVHRHLQNGDILLLNR
QPTLHRPSIMAHRAKILGGEKIFRLHYSNCKSYNADFDGDEMNAHLPQNEVARAEAYGLV
AVPYQYLVPKDGTPLGGLIQDHIVSAVKLFIRGKFFNREDYQQLVFQALSNKKGNIELLP
PSILKPVRLWSGKQIISTIIKNSTPKGMPYINLVGKSKLNNKHWCVLAARPWEYGGTPLR
ENELSESEVFIRQGELLSGILDKNHFGATPYGLIHCMYELYGGVCSTALLSSLSRLFTYY
LQWEGFTLGVRDILVQSKADRKRSRIIRECRAVAGHEAATSALELPASVSRDELAQRMRE
AYAKNPKFRAILDRKYKTVLDTYTNRINNACLPEGLISKFPENNLQLMVQSGAKGSTVNT
MQISCLLGQIELEGKRPPLMISGRSLPSFADFDTSPKSGGFIDGRFMTGIQPQEFFFHCM
AGREGLIDTAVKTSRSGYLQRCLVKHLEGLSVHYDMTVRDSDGSVIQYMFGEDGMDIAKT
QFIGNEKQTRFLDMNRDVIVQPEVLKRLQTSRDEDPLNEALKKHVKKMKRWTKQNGGGPT
EVQRVRTSAFALFSADHAEALRAELPNPDKMKKSGRTKLTEKLLKRWAKLEPAARREYVR
RAAHCPDPVGAVFPPDSHYGVLSEKLEAMVRKYKRTEQPLHNIDELMQVKGSASLAAPGE
PVGVLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMCAAAEIKTPSMEIPFL
PHRKPERLKAVAEKLRKSLNRVTVADVLETINIKSKLVVHPSRGMQHTIRFNFLPQDAYD
HDYCVTPSGILRHMSRKFFKAMFAAIRRAESAKNVLIDTEMQEGKSKKHKKGADTEEDDE
IDRQEPEKVDKSEKAVYSDSDSDSDDGGTPAVDGDASDAKNRGKTKDEHDYDEDDENDAD
ADAAGASSDDSGVSEDEQEDEKEAQKQPAAGGKQKKKLPSAKASRSRCIEEALIEEYEKE
QDELGQELAAMPGAEETLNEAEETMFLAQVNAQVSKFQHDRVAKRWCQIVLHMPLKLKEI
DFTKVLRDVAAKSVIWEVPRIKRAITYMQNDQLYLRTDGTNMSAMTAHAKVLDLNRLYTN
DIHAMANRYGIEAASRVIVKEIQNVFSVYGITIDPRHLLLVADYMTASGRYQAMNRMAME
SSVSPLQQISFESSLKFLKEALLKGTNDRLESPSSRLIVGQPCKVGTGSFTLYSSALKDY
AEASMA
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgtgaaccttgatccaaccaacctcgagttctccgtctttacgacggaggac
gtgcggaagatcagcgtgatgaaggtggaatcgtaccggtcgttcgatgacatgggcaac
ccggtcaagtccgggctgtacgatccggcgatgggtccgtgcgggttcggtgaaatctgt
gcgacgtgcacccgtgacgtcagcacgtgcgagggccacttcgggctgatcgagctggac
ctggtcgtgtacaatccgttcttcatgcgcacggttagcagtctgctgcgcattacctgc
atgtcgtgcgcccgggtgcagctgcaggacggagcgaaatcgttgctcgagctgcagcta
cggctggccgacgccggctacatcgtcgaggcggaagagatcgacgtgtacaagacgaaa
ctgcaggccaatccgcacgatgccataccagaggagataacgtactacgaggacctgctg
cgcaaggagccgtacaacaagctcggcaacacgaagctctccagcacgatccggaccgcg
atcgtgaacagcacgctcaggcaggaatcgaaacgttgcatccactgtacgaaaatgctg
cagcgtgttcgcattaccgataaaaaactaacgatacggtggacgcaagcggacaagaag
gcgtttctcgaggagaagggaaacaagaacccaaccgacgaggaggtaaaatcgtccacg
gaggtggtgctcgcccgcgaaagccaaatgtttctgcgcaagctgtacgagcaggaaggc
acgctgctgtcgctgctctttcccgtactgaactcggccaagcacgagacgacccaatat
ccgacggacattttcttcatggaggtggtaccggtgccgccgtgcaagatgcgtcccgtt
cgccgagcgaaccgcgtacccggccgctcctcggtaatggagcacgcgcagtcggtgctg
ctgcgcaacatcttcgtcgcgaacgcaaccgtgcgggccattctgctcggcagcgaggga
aaggagaaaccggaaggcatgagcgatgcgacgttcggccagctgaaatcgatccaccag
caggcgaagggcgccaccgtgacggagaagctgtttcacgcctggtgcgatctgcagtcg
aacgtcgaccagctgctggacgtggagaagctgtccggcggcaagcaggtggtcacgttc
gggctgaagcagctgatcgagaagaaggccggcctgatccggatgcacatgatgggcaag
cgggtgaaccatgcggcccgcacggtcatcacgcccgatccgaacatcggggtggaggag
atcggcataccgacgcggttcgcgaagaagctcacctacccggtccccgtgacgccctgg
aatgtggccgagctgcgccagtgggtgatgaacgggccggacgtctatccgggcgcgaac
atgatcgaagatgcgaacgggcgggtaagcaaaatatcgtccacgaacgtgacgcagcgc
caatcgctggccaaaacgctgttaacgccgcacggtgctggcgcggagtcgagcggcgac
gatacgatcaagatcgtccatcggcatctgcagaacggggatatactgctgctcaaccgg
cagcccacactgcatcgaccgagtataatggcgcaccgggcgaagattctcggtggggag
aagattttccgcctgcactactcgaactgcaagtcgtacaatgcggactttgatggggat
gaaatgaatgctcatctgccgcagaacgaggtggcccgggcggaggcgtacgggttggtg
gcggtgccgtaccaatacctcgtgccgaaagacggcacaccgctgggtggtttgattcag
gatcacatcgtatcggcggtgaagcttttcatacgcggcaagtttttcaatcgggaggac
taccagcagctagtgtttcaggcgctgagcaacaagaagggcaatattgagctgctgcca
ccgtccatcctgaagccggtgagactgtggtccggcaagcaaatcatctcgaccatcatc
aagaacagcacaccgaagggcatgccgtacatcaacttggtgggaaagtcgaagctaaac
aacaagcattggtgtgtgcttgccgcccgtccctgggagtacggcggcacaccgctccgc
gagaacgagctgtccgaatcggaggtgttcatccggcagggtgagctgctgagcggcatc
ctcgacaagaaccacttcggcgccacaccgtacggtctgatccactgcatgtacgagctg
tacgggggcgtctgctccaccgctctcctttcgtccctgtcgcggctcttcacctactac
ctgcagtgggaagggttcacgctgggcgtacgggacattctggtgcagagcaaggcggat
cggaagcggtccagaattatacgcgagtgtcgcgcggtggccgggcacgaagcggccacc
tcagccctcgagctgccggcgagcgtttcgcgcgacgagctggcccagcgcatgcgggaa
gcgtacgcgaagaatccaaagtttcgcgccatactcgaccggaagtataagaccgtgctc
gatacgtacaccaacaggattaacaacgcatgcctgccggaaggcttgatcagcaagttc
ccggagaacaatttgcagctgatggtacagtcgggtgcgaagggttcgaccgttaacacg
atgcaaatctcgtgcctgctcgggcagatcgagctggagggcaaacgacccccgctcatg
atttccggccgttcgctgccgagctttgccgattttgatacgtcaccgaagtcgggcggc
tttattgacggccggtttatgacgggcatacagccgcaggagttcttcttccactgtatg
gcgggtcgggagggtctgatcgatacggcggtgaaaactagccgctccggctacctgcag
cgctgtctggtgaagcatctcgagggcctgtcggtgcactacgacatgacggtgcgggac
agcgacggcagcgtgatccagtacatgttcggcgaggacggtatggacattgcgaagacg
cagttcatcggcaacgagaagcagacgcgctttctcgacatgaaccgggacgtgatcgtg
cagccggaggtgctgaagcggctgcagacgtcccgcgacgaggatccgctgaacgaggcg
ctgaagaagcacgtcaaaaagatgaaacgctggacgaagcagaatggcggagggccgacg
gaggtgcagcgcgttcgcacgtccgcttttgctctgttttcggccgaccatgcggaagcg
ttgcgggcggagctcccgaacccggacaagatgaaaaagtcgggccgtacgaagctgacg
gagaagctgctcaagcggtgggcaaagctggagccggcagcccggcgcgagtacgtgaga
agggcggcccactgtcccgatccggtcggtgccgtctttccgcccgattcgcactacggc
gtgctgtcggagaagctggaggcgatggtgcgtaagtacaagcgcaccgagcagccgctc
cacaacatcgacgagctgatgcaggtgaagggcagtgcgtcgctggcggcgccgggcgaa
ccggtcggcgtgctggcggcccaatcgatcggcgaaccgtctacgcagatgacgctcaac
acgttccacttcgcggggcgcggtgagatgaacgtgacgctcggtattccgcgtctgcgc
gagattctgatgtgtgcggcggccgagatcaagacaccgtcgatggagataccgttcctg
ccgcaccgcaaaccggagcggctgaaggcggtggccgagaagctgcgcaaatcgctcaac
cgtgtcacggtggcggatgtgctggaaactattaatatcaagtcgaagctggtggtgcat
ccttcgcgcggcatgcagcacaccatacgcttcaacttccttccgcaggacgcgtacgat
cacgactactgcgttacgccgagcggcatccttcggcacatgtcgcgcaaatttttcaaa
gcaatgtttgccgccattcggcgagcggaatcggcgaagaatgtgctaatcgacactgaa
atgcaggaaggtaaatcgaaaaagcataagaagggggctgacactgaagaggacgacgag
atcgatcgccaggagccggagaaagttgataagagcgagaaggctgtgtattcggatagc
gacagtgactcggacgatggtggcacgccggctgttgatggggatgcatcggatgcgaag
aaccggggtaagaccaaggacgagcacgattacgacgaggatgacgagaacgatgcggat
gcggatgctgcgggggccagctccgacgactcgggcgttagcgaggacgagcaagaggat
gagaaggaggcgcaaaagcagccagcagcggggggaaagcaaaagaaaaagcttccgtcc
gccaaggcatcgaggagtcgctgcatcgaggaggcgctgattgaggagtacgaaaaggag
caggacgagctggggcaggagctggcagcgatgcccggcgccgaggaaacgctgaatgaa
gcggaagagaccatgtttttggcgcaggtgaacgcgcaggtcagcaagttccagcacgat
cgggtcgccaaacggtggtgccagatcgtgctgcacatgccgctcaagctgaaggagatc
gacttcaccaaggtgctgcgggatgtggccgccaaatcggtaatctgggaggtgccccgg
atcaagcgcgccatcacgtacatgcaaaacgatcagctgtacctacgaacggacggtacg
aacatgtcggcgatgacggcgcacgcgaaggtgctggacctgaaccggctgtacacgaac
gacatccacgcgatggccaaccggtacggcatcgaggcggcgtcgcgcgtgatcgtgaag
gaaatacagaacgtgttcagcgtgtacggcatcacgatcgatccgcgccatctgctgctg
gtggcggactacatgacggcgagcggccggtaccaggcgatgaaccgcatggcgatggag
tcttcggtctcgccgctgcagcagatttcgttcgaatcgtcgctcaagttcctgaaggag
gcgctgctgaagggcacgaacgatcggctggagtcaccctcgtccaggctgatcgtgggc
cagccgtgcaaggtgggcacgggctcgtttacgctctactcgtccgccctgaaggactat
gccgaggcgtcaatggcataa
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integrated database retrieval system
