Candidatus Koribacter versatilis: Acid345_3812
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Entry
Acid345_3812 CDS
T00352
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase precursor
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba00540
Lipopolysaccharide biosynthesis
aba01100
Metabolic pathways
aba01250
Biosynthesis of nucleotide sugars
Module
aba_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Acid345_3812
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
aba01005
]
Acid345_3812
Enzymes [BR:
aba01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
Acid345_3812
Lipopolysaccharide biosynthesis proteins [BR:
aba01005
]
Core region
Acid345_3812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
adh_short
KR
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
ABF42812
UniProt:
Q1IJY8
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All DBs
Position
complement(4506702..4507706)
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AA seq
334 aa
AA seq
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MVIVTGGAGFIGSNLVHELNAEGITDVLVVDNLANAAKFENLLGAKFADYMDKRAFRAAI
RERSLGAPKIEAILHQGACSNTLEDDGVYMMDNNYQCTKELLHFAIEQGARFVFASTAAV
YGLAGPGHFAPIPGNERPLNIYGYSKLMFDNYLRHKIAADEVSITAVGLRYFNVYGPRER
HKGRMSSVIHHFTGQMKKEQKLRMFQGSGGYGDGEQRRDFVYVRDLARMNLFFAQLGRFE
AAKGEPERTYRGIVNAGTGLSRSFNDVAAALMTIHGKVPVEYMPFPSDLIGRYQHFTEAD
ISGLRKLGWIEEPTTLEAGIDETYATLRQLGRES
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgttaccggtggcgccggattcattggaagcaatctcgttcatgaactgaat
gccgagggaatcaccgacgtccttgttgttgacaatcttgcaaatgcagcaaagtttgaa
aatttgctgggcgcgaaattcgccgactacatggataaacgggcctttcgagccgcaatt
cgagagaggtcgctgggagccccgaagatagaggctatcttgcatcaaggagcctgttcc
aacacgctagaagacgatggcgtgtacatgatggacaacaattatcagtgtactaaggag
ctcctgcatttcgcgattgaacagggagcgcgcttcgtctttgcttccacggccgccgta
tacgggctagcaggtcctggacattttgcgccaattccagggaatgagcgtccgctcaat
atttacggctattcgaaattaatgttcgacaattatttacgccataagatagcagcagac
gaagtgtcaatcacggctgtgggtctgcggtacttcaacgtctacgggccgcgcgagcgt
cacaaaggacgtatgtcttcagtgatccatcatttcacgggacagatgaagaaagagcag
aaactgcggatgttccaaggatccggcggttatggagatggtgaacaaagaagggatttc
gtatatgtccgcgacctcgcaaggatgaatttattcttcgcgcagctcggacgtttcgag
gcggctaaaggcgaaccagagaggacataccgtggcatcgtcaacgctggcactggactg
agccgaagcttcaatgatgtcgcggctgcactaatgacgattcacggaaaggtcccggtc
gagtacatgccgtttccatccgatctaattggtcgatatcagcatttcaccgaggcagac
atatcgggactccgcaaactcggctggattgaggaaccgaccacgctggaagcaggcatc
gacgagacatacgcgacactacggcagttgggccgcgagtcttga
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