KEGG   Candidatus Nanopelagicus limnes: B1s21122_02770
Entry
B1s21122_02770    CDS       T05073                                 
Name
(GenBank) RHH-type transcriptional regulator, proline utilization regulon repressor
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
abam  Candidatus Nanopelagicus limnes
Pathway
abam00250  Alanine, aspartate and glutamate metabolism
abam00330  Arginine and proline metabolism
abam01100  Metabolic pathways
abam01110  Biosynthesis of secondary metabolites
Module
abam_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:abam00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    B1s21122_02770
   00330 Arginine and proline metabolism
    B1s21122_02770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:abam03000]
    B1s21122_02770
Enzymes [BR:abam01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     B1s21122_02770
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     B1s21122_02770
Transcription factors [BR:abam03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    B1s21122_02770
SSDB
Motif
Pfam: Aldedh Pro_dh
Other DBs
NCBI-ProteinID: ASY09274
UniProt: A0A249JXM1
LinkDB
Position
complement(734956..738342)
AA seq 1128 aa
MNQIIQTDPGIDKLADTAVENARALIAESLPNLKRYDKASRKRFTRLFKDPKAISVTVSL
TDEVMRITSAKDSVRILRKAAKDSTVAGFGLFNTFGLKLIAAISRALPKPVLFAVHTQVK
LLSKGIILPAESKKLSRQIKKRAKKGIRLNINVLGEAVLGEDEANERFERVMQMMQRPEV
DYVSVKLSSVASQIISLDRKGTLERVSEKLRHIYRTSIATNTFVNLDMEEFRDLRLTVDA
FKLVLNEGEFKNLYAGLVLQAYLPESHEVFAELVEWSLERHKQSGGVIKIRLVKGANLAM
EKAEAELHGWVAAPYKSKADVDASYSRLLDTALRPEHAKAVRIGVASHNLFHIAFALEIA
KKRNVMEQLDLEMLEGMANPEALAIAKRSMRILLYAPVTRADDFASAVAYLVRRLDENTA
VENYLRSSFEIGTNAEKFREQSNRFLDSASQRHEISTKSIRHKNHKFQIDQKFENAPNAD
ITKLDFLNKLDKEIAAVLKLPIEEMPLVIDGKEIFDRIQIEGNDPGDNAKVWYKYSVAKL
IDIDSAVKVAKKSVEDWNQIGADKRGEILKKFGQIAHDEQEETIAIMSRDAGKTVSEADP
EVSEAIDFANYYALSAISLDLERQSSPVGVVLVVPPWNFPYAIPTGGICAALAAGNAVIF
KSAPETVATSWQLVNQLWKAGVPKNVLQFVSTEDNEVGQALVSHEDVNAVILTGGYSTAL
LFSSWKNELNLLAETSGKNSMVLTACCDIDVAVKDLVQSAFGHAGQKCSAASLAIVDKNI
YENPNFRKQLIDAVKSLKVGPGYNYSTMVGPIIKSAESNLRRALTQLDEGEQWLLEPKQL
DEAGLLWSPGVKTGVKPGSWSHLNEWFGPVLAIMISPDLETSINWQNATDFGLTAGIQSL
DPKECEYWIENVEAGNLYVNRGVTGAIVNRQPFGGWKRSSVGATAKAGGANYVATLRNWN
QMKHFLPMKEAANKWLKSTGELAIDHSGLSVEQNIQRYRRFKKGFLVRIESGTSKDELDF
LNWLKMDLGVITRLSSDSLIPGLANLVVESADEFANHAKEFDRVRWLSAEVPPVHQLMMN
GISCDRRPVTSRGDIELSRWFLEQSVSITQHRYGNTNAGPKPACRGLS
NT seq 3387 nt   +upstreamnt  +downstreamnt
atgaatcaaattatccaaacagatcctggcatagataaattagcagatacggctgttgaa
aatgctcgggcattaattgctgaatcactaccgaatttaaagcgttatgacaaagcaagc
agaaagcgatttactcgattatttaaagatccaaaggcaatctcagtaactgtttcatta
actgatgaggttatgcgaatcacctctgcaaaggattcagttcgaattttaaggaaagct
gctaaagattcaaccgttgctgggtttggtttgtttaacacttttggtttgaaactaatc
gccgcaatctcgagagcgcttccaaaaccggttttattcgcagtccacacccaagtaaaa
ctcttatctaagggaataatcttgcctgctgagagcaaaaaactttctaggcaaattaaa
aaacgtgcgaaaaaaggaattagattaaatatcaatgttttaggtgaagcggtattaggt
gaagatgaggcgaatgagagatttgaacgagtaatgcagatgatgcagcgccctgaagtt
gattatgtttcagtaaaactctcctcagttgccagtcaaatcatttcattggaccgcaaa
ggcacattagagcgggtaagtgagaagcttcgccatatttatcgcacatcgattgcaact
aatacctttgttaatttagatatggaggagttcagagaccttcgcttaactgttgatgct
tttaaacttgtattaaatgaaggtgagtttaagaatctctatgcaggcttggtactgcaa
gcatatttgccagaatcacatgaagtttttgctgaactagttgaatggtcattagaacgc
cataaacaatctggtggagtaataaaaataagattagtaaaaggtgcaaatttagctatg
gaaaaggcagaggctgaattacatggctgggttgcagccccttataaatcaaaagcagat
gttgatgcttcttactcaagattgctcgacaccgcactccgtccagagcatgccaaagcg
gtaagaattggcgtagctagtcacaaccttttccacattgccttcgcacttgagatagca
aaaaagcgtaatgtaatggagcaattggatcttgaaatgttagagggtatggctaatccg
gaagctttagcgattgctaaacgttcaatgcgaatactcctttacgcaccagttactcga
gcagatgattttgcctcagctgttgcctacttggttagaagattggatgaaaatacagcg
gttgaaaactatctacgctcctcttttgagattggcactaacgcagagaaatttagggag
caatctaatcgctttcttgatagtgcttcacagcgccacgaaatttcaactaaaagcatc
cgtcataaaaatcataaatttcagatcgatcaaaaattcgaaaatgcaccaaatgccgat
atcaccaagttggatttcctcaacaaactagataaagagatcgcggccgtattaaaactt
ccgatcgaggagatgccgctggttatcgatgggaaagagatttttgatcgcattcagatc
gaaggaaatgatcctggtgataatgccaaggtttggtataaatacagtgttgctaaatta
attgacattgattctgccgttaaagtagccaaaaaatctgttgaggattggaatcagatt
ggtgcagataagcggggcgagattcttaaaaaatttggccagatagcacatgatgaacaa
gaagaaacaattgcaattatgtcccgtgatgctggcaaaacagtttcagaagctgatcca
gaggtttcagaagcaattgattttgccaattactacgcactttctgctatttcattggat
ttagaaagacaatcatcaccagttggagttgttttagtagtaccaccatggaattttcct
tatgcaattcctaccggtggtatatgtgctgcgttggctgcaggtaacgctgtaattttc
aaatcagcacctgaaacagtggcgacctcttggcagctagtaaatcaattatggaaagct
ggcgtaccaaaaaatgtgctgcaatttgtttcaacagaagataacgaggttggacaagct
ttggtatcccatgaggatgttaatgcagtgattttaactggtggttacagcacagctttg
ttgttctcctcctggaagaatgaattgaatttattggctgaaaccagtggtaaaaactcc
atggtgttaactgcatgttgtgatattgatgttgcggtaaaagacctggtgcaatcagcg
tttggccatgctggacagaagtgctctgctgcatcattagcaattgttgataaaaacatt
tatgaaaatccaaactttagaaagcagttaattgatgcggttaaatcactaaaggtaggt
ccaggttataactattcaacaatggtcggaccaataatcaagagcgcggaaagtaatctg
cgccgcgccctcactcaactagatgagggtgagcagtggcttctggagcctaaacaatta
gatgaagcaggcttgctttggtcgcctggagttaagacaggcgttaaacctggttcttgg
tctcaccttaatgaatggtttggtccagtgcttgcaatcatgatctcacctgatttagaa
acatcaattaattggcaaaatgcaaccgacttcggtttaacagctggtattcagtcactt
gatccaaaggaatgtgagtactggattgaaaatgttgaggcaggaaatttatatgttaat
cgtggcgtaaccggtgcgattgtgaaccggcaaccatttggtggttggaagagaagctca
gttggcgcaacagccaaagcagggggtgccaattatgttgccaccttgcgtaactggaat
caaatgaaacactttttgccaatgaaagaggcagcgaataagtggctgaaatcaacagga
gaattagcgattgatcattcaggcctaagtgttgaacaaaacatacaaagatatcgccga
ttcaaaaagggctttctcgtaagaattgaaagtggcactagcaaagatgaattagatttt
ctaaattggctcaagatggatctcggggtaattacccgcttgagcagtgattcattaatt
cctggtttggctaacttagtcgtagaaagcgcagatgaatttgccaatcatgcaaaagag
tttgatcgagttagatggctttcagctgaagtgccaccagtgcatcagttgatgatgaat
ggcatctcatgtgatcgcaggccagttacatccagaggagatattgaattatctaggtgg
ttcttagagcaaagtgtttccattactcaacatcgctacggcaatactaatgcaggacca
aaaccggcttgcaggggactttcttaa

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