Candidatus Nanopelagicus limnes: B1s21122_03940
Help
Entry
B1s21122_03940 CDS
T05073
Name
(GenBank) phytoene synthase
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
abam
Candidatus Nanopelagicus limnes
Pathway
abam00906
Carotenoid biosynthesis
abam01100
Metabolic pathways
abam01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
B1s21122_03940
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
abam01006
]
B1s21122_03940
Enzymes [BR:
abam01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
B1s21122_03940
Prenyltransferases [BR:
abam01006
]
Terpene biosynthesis
Squalene/phytoene synthase
B1s21122_03940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ASY09486
UniProt:
A0A249JY97
LinkDB
All DBs
Position
complement(495774..496685)
Genome browser
AA seq
303 aa
AA seq
DB search
MDELTAAGITDPRLRASYTECKRLNSLHGKTYYLATLLLPKEKRPFVHALYGFARYADEI
VDDLNSTLTDEEKATALISWGDQVLRDLRAGSSQDPIAAALVDTAMKFDIPIAYFEAFLH
SMKMDLTVTEYQTYQDLYEYVYGSAAVIGLQMVHVLGTVSPSSLNEAKIAAEKLGVAFQL
ANFIRDVGEDLDRGRVYLPVSEFVAHGVTRSMLEDKVLTPAIRNALKEQILRVRKLQEES
DSGIKLLTPGSRECILAASELYCGIVDEVEKIDYEVFNKRAKTSSWRRLKVAGPAYMRAK
FKK
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattaaccgcagctgggataacagatcctaggcttcgagcttcatatactgaa
tgtaaaaggctgaattcactccacggaaaaacgtattatcttgccactttgttgctgcca
aaagaaaagcgaccatttgttcacgcgctttatggttttgccagatatgcagatgaaata
gttgatgatctgaactcaacactgacggatgaagaaaaagcgactgcgctaatttcgtgg
ggcgatcaagtactgcgcgatcttcgagcaggcagcagtcaggatccaattgcggctgca
ctagttgatactgctatgaaatttgatattccgattgcctattttgaagcttttttacac
tcaatgaaaatggatctaactgttactgagtatcaaacatatcaagatctttatgagtat
gtttatggatctgcagccgtaattggcttacaaatggttcatgtattaggtacggtttcc
ccttccagtttaaacgaagccaaaattgcagcagaaaaattaggtgttgcttttcaactt
gcaaattttattagagatgttggtgaagacttagacagaggaagagtttacctaccagtt
tctgaatttgtggcccatggcgttacacgatcgatgttggaggacaaagtgcttacacct
gcaataaggaatgcacttaaggagcaaattctcagagttaggaagctgcaagaggagtct
gactctggaataaagttgctaaccccaggaagccgtgaatgtattttggcagcgagtgag
ctctactgtggaattgttgatgaggtagaaaaaattgattatgaagtgtttaacaagcgg
gcaaaaacttctagttggcgtagattaaaggtcgcagggcctgcgtatatgcgagcgaaa
tttaagaaataa
DBGET
integrated database retrieval system
