Trichophyton benhamiae: ARB_03056
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Entry
ARB_03056 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
abe
Trichophyton benhamiae
Pathway
abe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
ARB_03056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abe03019
]
ARB_03056
Enzymes [BR:
abe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
ARB_03056
Messenger RNA biogenesis [BR:
abe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
ARB_03056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
MMR_HSR1
nSTAND3
AAA_24
ABC_tran
Motif
Other DBs
NCBI-GeneID:
9525707
NCBI-ProteinID:
XP_003010355
UniProt:
D4B3L7
LinkDB
All DBs
AA seq
548 aa
AA seq
DB search
MSLPGLELSQPTIESQRAPAAPVQHTLSQGSEWRFEVAYGNSVRVKLLSGTAELFGTELA
TSQTYTFSGTKAAIYTWHGCTLEVTEGDPVAIGVIGSAPVPAGSGSGGCQVEYTAEETPM
VDYANVHFALETLRDEAKANGRGGPRVLILGPEDAGKTSLAKILTGYATKMGRQPFVVNL
DPSEGMLSVPGTLTATAFRTLIDVEQGWGSSPLSGPTPIPVKLPLVYFYGLQSPLSGGEE
LYKSIVSRLALTVAGRLAEDEEAKEAGIIVDTPGEISQGKGGGEDIINHIVTEFSISTIL
VLGSERLYSTMVKNYDGKPISTTSTMPVSDEKISVVKLSKSGGCVDRDESFMKSTRESQV
RSYFFGTSAPSTASSALSSTAPGSVISLSPHGQHVDFDNLSIYNITINSDEYDGMKHITN
STSEFSFLPGGSNDDGEDDAPASAAALGPGPSSSGLPSQQIPLKKLVATPDYPVPQALEN
TLLAITHAPPNAPLNEIRDASIMGFLYVAGVDSKKGKLRLLSPVAGRVPARAIIWGNKWP
GEILGLVG
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgccaggcttggagctctcgcagcccaccatcgaatcccagagagctcctgca
gcacctgtacagcataccctttctcaaggctcagaatggagatttgaagttgcgtatggg
aactcagttagagtcaagctattatcaggcactgcagagctgtttggaacagaactagct
acgtcgcaaacgtataccttttcagggactaaggctgccatatacacctggcatggatgt
acattggaagtgacagaaggagatccagttgctataggagtcattgggagtgcccctgtt
cccgctggatcaggcagtgggggatgtcaagtggaatataccgccgaagaaacgccaatg
gtagactatgcgaacgtacacttcgcactggaaacactacgagatgaggcaaaggccaac
ggtcgaggcgggccccgtgtgctaattctagggccggaggatgccggcaaaacgagcctg
gcaaagatattgacgggttacgcaacgaagatgggacgtcagccatttgtggtcaacctt
gatccgtcagaggggatgttgagtgtgcccggtacattgacagcaacggctttccggaca
cttattgatgttgagcaaggttggggaagtagtccattgtctgggccaacgcccataccg
gttaaactcccactagtgtacttctatggcttacagagccctctcagtggtggggaggaa
ctttacaagtctattgtctcgagactcgctctgacagtagcgggccggctagctgaagat
gaggaagcaaaggaagctggaatcattgttgatacccccggagaaatcagccaagggaaa
ggtggcggtgaagatatcatcaatcatatagttacagaattctcgatttcgacgattctc
gttcttgggtcggaacgtctttatagtacgatggtcaagaactatgatgggaagccgatt
tctacaacctctacaatgcccgtatcagacgagaagatatccgtagtcaaactctccaaa
tcagggggttgcgttgatcgtgatgaatcgtttatgaaatctactcgtgaatctcaagtt
cgatcatatttcttcggaacatccgctccatcaactgcatcttcagctctttcatctact
gctcctggctcagtcatatctctctcccctcacggtcaacatgttgatttcgacaatcta
tctatctacaacattactattaacagtgatgaatacgatggcatgaagcatataactaat
tctacaagcgagttctcatttcttccaggtggcagcaatgatgacggagaggacgacgcg
cctgcgtcggctgctgctttagggcctggtccgtcatcatcaggcctcccttcccaacag
ataccccttaagaagctggtcgccacacctgattaccctgttccacaagcgctggagaat
acattgttggcaatcactcatgctcctccaaatgcgcctttgaatgaaatccgggatgct
agcattatggggttcctctacgttgccggtgtagattcaaagaaagggaagcttcgacta
ttatctccagtagctgggagagtacccgcgagagccataatatggggaaataaatggcct
ggagaaatcctcggattggttggataa
DBGET
integrated database retrieval system
