Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT111877
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Entry
AGABI1DRAFT111877 CDS
T03136
Symbol
AGABI1DRAFT_111877
Name
(RefSeq) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03020
RNA polymerase
abp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AGABI1DRAFT111877 (AGABI1DRAFT_111877)
09124 Replication and repair
03420 Nucleotide excision repair
AGABI1DRAFT111877 (AGABI1DRAFT_111877)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abp03021
]
AGABI1DRAFT111877 (AGABI1DRAFT_111877)
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT111877 (AGABI1DRAFT_111877)
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT111877 (AGABI1DRAFT_111877)
Transcription machinery [BR:
abp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
AGABI1DRAFT111877 (AGABI1DRAFT_111877)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AGABI1DRAFT111877 (AGABI1DRAFT_111877)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
AGABI1DRAFT111877 (AGABI1DRAFT_111877)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
18823442
NCBI-ProteinID:
XP_007327478
JGI:
Agabi_varbur_1_111877
UniProt:
K5XE37
LinkDB
All DBs
Position
Unknown
AA seq
170 aa
AA seq
DB search
MFFIKELTHTILLHPSYFGPRMLSFLESKLYSDVEGTCSGQFGYIIAVVSILDIGKGMVL
SGSGQAEFVTRYRAIVFKPFKGEVVDGVVNNVNKMGFFADAGPLTVFISHQLIHPNMRFD
PNSNPPSFASEDQIIEKNTRVRLKIVGTRVDATEIFAIGTIKEDHLGVID
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcattaaagagctcacgcatactatactactgcacccgtcatattttggcccc
cggatgctcagtttcctagaatccaaactttactcggatgttgagggcacctgctctggc
caattcggttacatcatcgccgtggtgtcaatacttgacatcggaaaaggcatggttctc
agtgggagtgggcaagcagaattcgtgacaagataccgagcgatcgtattcaagccattc
aaaggagaagttgtagacggagtggtcaacaatgttaataagatgggtttcttcgccgac
gctggtcctttgactgtcttcatatcacatcaacttattcaccccaatatgcgctttgac
ccgaattcgaatcctccctctttcgcttctgaagaccagatcatcgagaaaaatacacgc
gttcgcctaaaaatcgtcggtacacgtgttgacgcgacagagatttttgccatcggaacg
atcaaagaagaccatttgggtgtcatagactag
DBGET
integrated database retrieval system
