Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT119994
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Entry
AGABI1DRAFT119994 CDS
T03136
Symbol
AGABI1DRAFT_119994
Name
(RefSeq) hypothetical protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AGABI1DRAFT119994 (AGABI1DRAFT_119994)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abp03021
]
AGABI1DRAFT119994 (AGABI1DRAFT_119994)
Enzymes [BR:
abp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AGABI1DRAFT119994 (AGABI1DRAFT_119994)
Transcription machinery [BR:
abp03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
AGABI1DRAFT119994 (AGABI1DRAFT_119994)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
18825616
NCBI-ProteinID:
XP_007329239
JGI:
Agabi_varbur_1_119994
UniProt:
K5WWS6
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MPDGSAQTRKKPTFNTLEREKAFRNPPKEGSVHAVLNEFVAPHIESFNALFDDSGLPLGD
GDGRGLISLAIKDIGERVVFDGISHGTDLRGNRIRIWIEQATVAKPQVPERAQVIERRIF
PSEARERLTSYRGRMTLKICWTDAHGQKNETIKDCGLLPIMVRSVRCNLKGLSSAALVAK
HEEPEEFGGYFIINGNERLIRYLILPRRNHVISLIRPSFANRGLSYTQYAVQIRCVRPDQ
TSATNTLHYLSNGSAMLRFSWRKQEYVIPIMLILKAMVGASDKEIFEGVIMRDYENTFLT
DRVELLLRSFKVFTLNTGEQCLDYLGDKFRVVLNLPEDWTNTAIGKWLVQKMILVHLDSP
RDKFRMLLFMLRKLFALVSSSCCADNPDSPQHQEVLLPGTLYGMIIKERMEEILNNICNT
VMLDVRNGATVDFHDKRYFTKVTSKVNFDIGARLANFLATGNLISPTGLDLQQASGFTIV
AEKLNWQRYISHFRCIHRGAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLSR
TCRIVTSPLAVAHLPSLLGSCGMTQVFTPSINGQKNISVQLDGRIIGWAQPSVASQLAKN
LRVWKTEGKNGVPLDLEIGFVPESDGGQYPGLFLFANRSRMMRPVKYLPNGKDDQIGSFE
QVYMNVACLPEEIDTNSTHVEHNPTNFLSILANLTPFSDFNQSPRNIYQCQMGKQSMGTP
STALKHRTDNKLYRLQTGQSPVVRPMLHNTYAMDSYPNGTNAIVAVISYTGYDMEDAMIL
NKSAHERGFAYGTVYKSQIVDLKDMRGANKSVTAPSLHFGLGPDVRLEGDRAHHCVDFLD
LDGLPYIGTRLKAGDPIAAYIDETAGRTKFVKYKGDEMAYVDEVRLLASDSGDTELQKMH
VTLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFTESGMQPDVIINPHAFPSRMTIGM
LVESMAGKAGAMHGLAQDATPFKFSEKDTAIDYFGKQLSAAGYNYYGNEPMYSGITGQEF
AADIYIGVVYYQRLRHMVLDKFQVRTTGPVDPITRQPVKGRKRAGGIRFGEMERDALIAH
GASFLLQDRLMNCSDYSTAWVCRTCGSLISLGYEDISLGEVSLGTSGSIKPTGPSGEYCR
VCRAAAEEEEEHERQALSTSQQSQRPPQNGVQVAISSQNVLGRASNKGGDLDVVAVPYVF
RYLCAELASMGIAVSLEVR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatggctctgcacaaacgcgcaaaaaaccgacattcaacaccttagaacgcgaa
aaagccttcaggaatcctcccaaggaaggctcagtacacgctgtcctcaatgagtttgtc
gccccccacatcgagtcttttaatgctcttttcgatgattctggtctaccgcttggggat
ggtgatggacgtgggcttatttctcttgcaatcaaagatataggagagcgcgtcgttttt
gatggaattagccatggcacagatcttagaggcaatcgtatccgaatctggatagaacag
gctacagtggctaaaccacaagttcctgaacgggcgcaagtaatagaaaggagaattttc
ccttccgaggctcgcgaacgcctgacctcgtatcggggtcgtatgacgttgaaaatatgc
tggaccgacgcacatggtcaaaaaaatgaaacaatcaaagattgtggtcttttgccaatc
atggtccggtctgttaggtgcaatcttaaaggactatcatcggccgctcttgtagccaag
cacgaagaacccgaagagttcggcggttactttatcatcaacggtaatgaacgtctcatc
cggtatctcatccttccaagacggaatcatgttatatccctcatccgaccctctttcgct
aatcgtggtctatcatatacccaatacgctgtgcaaatccgttgcgtgcgtcctgatcag
accagcgctaccaacactctccattacctttctaacggcagcgcgatgctgaggtttagt
tggcggaaacaagaatatgtcatacctatcatgttgattcttaaggccatggttggtgcc
tcggacaaagaaatatttgagggtgtcataatgcgagactacgagaacacctttctgact
gaccgtgttgaacttttactccgaagttttaaagtcttcaccctcaataccggcgaacaa
tgtttggattatcttggcgacaaattcagagtagtacttaacttgccggaagactggacg
aacactgctattggaaagtggttggtacaaaaaatgatactggttcacttggattccccc
agggacaagtttcggatgcttctgtttatgctacgtaaactatttgcattggtatcaagc
tcttgctgcgccgataatcccgactcccctcaacatcaagaggttctgctacccggcact
ttgtatggcatgattatcaaagaacgcatggaagagattctcaacaacatctgcaataca
gtcatgcttgacgtcagaaatggggccaccgtcgattttcacgacaagcggtactttacg
aaggtgacatcgaaagtcaatttcgacattggcgcaagattggcgaattttttggctaca
gggaatctcatatcacctacgggccttgatttgcagcaggcgtctgggttcacaattgtt
gccgaaaaacttaactggcaacgttatatcagtcatttcaggtgtatccatcgtggcgct
ttcttcgccgagttaaaaacaactacagttcgtaagctactacctgaggcatggggtttc
ctttgtcccgtacatacacccgacggctcaccttgcggcctccttaaccatctttctcgg
acatgtcgaatagtgacatcccctcttgctgttgcccacttgccttcacttttaggttca
tgcgggatgacacaggttttcacaccttcaatcaatggacaaaaaaacatttccgtgcaa
cttgatggtcgaatcatcggctgggctcagccttccgtcgcatcccaacttgctaaaaat
ttgcgagtatggaagacggaaggtaagaatggtgttcctttggatcttgaaataggtttt
gtgcccgaatcggacggtggtcaataccccggacttttcctctttgccaaccgttcacgg
atgatgcggcctgtgaaatatttacccaacgggaaggacgaccagattgggtcgttcgaa
caggtgtatatgaatgttgcctgtcttcctgaagagattgacaccaattcaactcacgtt
gaacacaaccctacaaatttcttgtctatcctcgccaatctaaccccattttccgatttc
aatcagagtccccgaaatatctaccagtgtcagatggggaagcaaagcatgggtacccct
tccacagcgctcaagcatcgcacagacaataagctataccgtctacaaaccggtcaaagt
ccagttgttcggcctatgctccataacacctatgcaatggattcgtatccgaatggtacg
aatgctatcgttgctgtgatttcatataccggttacgacatggaagatgccatgatcctc
aacaagtctgcccatgaacgggggtttgcctacggaacggtgtacaaatcacagatcgtt
gatctcaaggatatgcgaggggcaaataaatctgtgaccgcgccgtcattacactttggt
ctgggccctgatgttcgtctggaaggcgaccgagctcatcactgtgttgattttcttgac
cttgatgggctaccttacatcggcacccgactcaaggccggggaccctattgccgcttat
attgacgaaactgctggccgaaccaagttcgtcaagtataagggagacgagatggcgtac
gttgacgaggttcgacttcttgctagtgactccggagatacagaattgcagaagatgcat
gtcactctgcgtatcactcgatctccagtcattggtgataagttctcatctcgacatggg
cagaaaggagtatgctcgcaaaaatggcctgccgtagatatgccattcactgagagtgga
atgcaaccggatgtcatcataaaccctcacgcgtttcccagtcgcatgaccattggtatg
ttggttgaaagcatggcaggtaaggcgggtgctatgcatggtctggctcaggacgccacg
cctttcaagttctcggagaaggacaccgccatagactacttcggaaaacagctgtcggcc
gcaggatataattattatgggaacgagccaatgtactctggcattacaggtcaagagttc
gcagcagatatctatattggagtagtctactaccagcgactgcgccatatggtattggat
aaattccaagtccgaacaactggtccagttgacccaattacgcgtcaacctgtcaagggt
cgtaagcgagctggtggtatccgattcggtgagatggagcgggatgctctcatcgcacat
ggagcttccttccttctgcaagataggttgatgaactgctcggactattcgactgcttgg
gtttgtcgtacttgcggcagccttatctcacttggctatgaagacatcagtctcggtgaa
gtttctttgggcacttcggggtcgatcaaacctactggaccaagcggtgaatactgtcgt
gtgtgccgcgcagctgccgaggaagaggaggaacatgagcggcaggcactcagtacaagc
caacaatcacagcgaccgccacagaatggcgtacaggtcgctatctcatctcaaaatgtg
ctcgggagagcatcgaataaagggggcgacctcgatgtcgtggcagttccttacgtgttt
agatatctctgtgccgaactggcgtctatgggtatcgcagtctcacttgaagtgagataa
DBGET
integrated database retrieval system
