Agaricus bisporus var. bisporus H97: AGABI2DRAFT188003
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Entry
AGABI2DRAFT188003 CDS
T03140
Symbol
AGABI2DRAFT_188003
Name
(RefSeq) hypothetical protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AGABI2DRAFT188003 (AGABI2DRAFT_188003)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abv03021
]
AGABI2DRAFT188003 (AGABI2DRAFT_188003)
Enzymes [BR:
abv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AGABI2DRAFT188003 (AGABI2DRAFT_188003)
Transcription machinery [BR:
abv03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
AGABI2DRAFT188003 (AGABI2DRAFT_188003)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
18080864
NCBI-ProteinID:
XP_006455869
JGI:
Agabi_varbisH97_2_188003
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MFYDDEENEWDRLNKTSWNGLGLTDPVKSVEDKWLLLPAFLKVKGLVKQHIDSFNYFVDV
DLKNIVKANNKITSDVDPRFWLKYVDINVGFPDRNEMETVEKKVTPHECRLRDTTYSAPI
IVTIQYTRGKNIVQRNVNIGRLPIMLRSNKCVLTGRTEAQLARMSECPLDPGGYFVVKGT
EKVILVQEQLSKNRIIVETDNVKGVVQASCTSSTHGGLKSKTYVATKKGRIYLRHNSIHE
DLPIVIALKALGVQSDKEILLLTAGNTEAYKIAFSANLEDAAKLGIFTRQQALEYIGTRV
KVNRRVVGPRRPAWEEALEALATIVLAHVPVNGLDLRPKAIFVATMTRRVLMAMNDENMV
DDRDYVGNKRLELAGQLLALLFEDLFKTYNSNLKSAIDKVLKKPSRTTEFDAYNTMQFQG
DHLTAGFVRAISTGNWSLKRFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGP
RALQPSQWGVLCPSDTPEGEACGLVKNLALMTHITTDVEEEPIIQLAFMLGVEDIRLATG
TEIYGPNTFVVNVNGTIIGLTRHPMRFVSQFRKLRRARRFSEFVSIYVNHHHRTVHIASD
GGRICRPMIIVEHGRSKVTPEHATHLKDGTATFDDFLRKGVVEYLDVNEENDTYIALYES
DITPHTTHLEIEPFTLLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIGYNQFNRIDTL
LYLSVYPQQPMVKTKTIELIGYDKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGYGR
CQVLRKNATLIRKYPNGTYDRLADAPIDENGMTAKRYDIIQPDGLAGVGERVDPGDIYVN
KQSPTNASDNSFTGQAASVPYKNTPLTYKSPVAGYIDKVMVTDTENEQTLIKVLIRQTRR
PELGDKFSSRHGQKGVCGLIVNQEDMPFNDQGINPDTIMNPHGFPSRMTVGKMIELLAGK
AGVLTGKLQYGTAFGGSKVEDMSRILIENGFSYAGKDMLTSGITGEPLEAYVYFGPIYYQ
KLKHMVMDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGATQLLLERLMI
SSDIFEVNACQECGLMGYNGWCTYCKSSKKMASLTIPYAAKLLFQELMAMNVVPRLILDD
AS
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgttttatgatgatgaagagaatgagtgggatcgactaaacaaaacttcctggaacggc
ctggggctgacagacccggtcaagagtgtagaggacaaatggcttcttctacccgccttc
ttgaaagtaaaaggcctcgttaaacaacacatcgattctttcaactatttcgtcgatgtc
gatctcaagaacatagtcaaagctaataacaaaataacctccgatgtggacccacgattt
tggcttaaatacgtcgatatcaatgtaggcttccccgacagaaatgaaatggaaacggtc
gagaaaaaagtcactcctcatgaatgccgacttcgagataccacctatagcgcacctatc
atcgtcacgattcaatacacaagggggaagaatattgtccagagaaatgtcaacatagga
cgtcttcctataatgctgcggagtaataaatgtgttttaaccggccgaacggaagcgcag
ctcgcacggatgtcagagtgtcctttggatccaggcggctatttcgtggtcaagggtacg
gagaaggttattttggttcaagaacagctcagcaagaatcgaatcatcgttgaaaccgat
aatgtgaaaggagtcgtccaagcatcgtgtacatcatcaacacatggggggctcaaatct
aaaacatacgtggccacgaaaaaggggaggatctatctccgccacaactccatccatgag
gatttgcccatagttatcgcgctcaaagcccttggggttcaatctgacaaagaaattctc
cttctaacagctggaaacactgaagcatacaaaatagccttttcggcaaacttggaagat
gccgctaagcttggcatttttacaaggcagcaagcgctcgaatatatcgggaccagagtc
aaagtaaatcgaagagtagttgggcccaggcggccagcgtgggaggaggctttggaggcg
ctggccaccattgtactagctcacgtaccggtaaacggactcgacttgcgacctaaagct
attttcgtcgcgacgatgactcgccgcgtgctcatggctatgaatgacgaaaacatggtt
gatgatcgcgactacgtcggcaataaacgattggagcttgctggtcaattattggctctc
ctcttcgaggatctattcaagacgtataactccaatctgaagagtgcgattgataaagtt
ctgaagaagccgtcaaggacaaccgagtttgatgcttacaacacgatgcaatttcaaggc
gaccatcttacagccggatttgtgcgagcgatctcaacgggaaattggtccctcaaacga
ttcaagatggagcgtgctggtgtaacacacgttctaagccgtttgagcttcatatcagca
cttggtatgatgacgcgcatctcatctcagtttgaaaagacgaggaaggtcagtggaccg
cgcgcactacagccaagtcaatggggtgtactgtgcccaagtgataccccagaaggggag
gcatgcggtctagttaaaaatctagctctcatgactcacattaccaccgatgttgaggaa
gagccgataattcagttagctttcatgctgggcgttgaagatatccggttagcgactgga
acagaaatatatgggccaaataccttcgttgtcaatgtcaatgggactatcatcggtcta
actcggcatccaatgcgcttcgtttctcagttccggaaactccgaagggccaggagattc
agtgaatttgtgagcatatatgtcaatcaccaccatcgtaccgtacacattgctagcgat
ggtgggcgcatttgtcgacccatgatcattgtggagcatggtcgttcaaaagttacccca
gaacatgccacgcatctcaaagatggtacagcaacatttgacgacttcttgcgcaaggga
gttgttgagtatcttgacgtcaatgaagaaaatgacacatatatcgccttatacgaatct
gacatcactcctcatacaactcacctcgaaatagagccattcaccctccttggcgccgtc
gcaggcctcataccgtatcctcatcacaatcagtctccacgtaatacctatcaatgtgcc
atgggcaagcaagcaattggggcaatcggctataatcaattcaaccgcatcgacacgttg
ttgtatctaagtgtttatccccagcagccgatggttaagacaaagacaattgaactcatc
ggctacgacaagttacctgcagggcagaatgcgacagtggccgtcatgagctattcagga
tatgatattgaagacgcactaattttgaacaaggcgagtttagatcgcggttatggacgt
tgtcaggttctgcgcaaaaatgcgaccctcatccgaaaatatcccaatggaacgtatgac
cgccttgcagacgctcctatagatgagaatggcatgactgccaaacgctacgatatcatc
cagccagatggtcttgctggagtgggcgagcgtgtcgacccaggtgacatctacgtaaac
aaacaatcgcccacgaacgcgtcggataattcgtttacgggacaagccgcctctgtcccg
tataaaaatactcctctgacttacaagagtccagttgccggttacatagacaaagtgatg
gtcaccgacactgaaaatgaacagactttgatcaaggttctcatacgacaaacacggcgc
cctgagttgggcgacaaattcagttcgagacacggtcaaaagggtgtttgcggtttgatt
gtcaaccaagaggatatgccattcaacgatcagggtatcaaccccgacacgatcatgaat
ccacacggtttcccttcacgtatgacggttgggaaaatgattgagctgctagctgggaag
gctggtgttttgacaggaaagctccaatacggcaccgctttcggagggtcaaaggtcgaa
gatatgagccgaatccttatcgagaatggtttcagttacgcagggaaagatatgctgaca
agtggtatcacgggcgagccgcttgaagcctacgtgtacttcggccctatatactatcag
aaacttaagcacatggtaatggacaaaatgcatgctcgagcgcgtggcccgcgtgcgacc
ctcacacggcaacctacggaaggtcgttcccgagagggtggtttgcgtttaggggaaatg
gagcgcgactgcttgattggttatggtgctacccagctattactggagaggttgatgatc
tcttcggatatctttgaggtcaatgcatgtcaagagtgcggcctgatgggatacaatggg
tggtgcacttactgcaagagctccaaaaaaatggcctcgttgacgattccttatgcagcc
aagttattatttcaagaattgatggctatgaatgtggttcctcgcctcatactggatgat
gcatcatga
DBGET
integrated database retrieval system