Agaricus bisporus var. bisporus H97: AGABI2DRAFT192637
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Entry
AGABI2DRAFT192637 CDS
T03140
Symbol
AGABI2DRAFT_192637
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03020
RNA polymerase
abv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AGABI2DRAFT192637 (AGABI2DRAFT_192637)
09124 Replication and repair
03420 Nucleotide excision repair
AGABI2DRAFT192637 (AGABI2DRAFT_192637)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abv03021
]
AGABI2DRAFT192637 (AGABI2DRAFT_192637)
03400 DNA repair and recombination proteins [BR:
abv03400
]
AGABI2DRAFT192637 (AGABI2DRAFT_192637)
Transcription machinery [BR:
abv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
AGABI2DRAFT192637 (AGABI2DRAFT_192637)
DNA repair and recombination proteins [BR:
abv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
AGABI2DRAFT192637 (AGABI2DRAFT_192637)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
18082232
NCBI-ProteinID:
XP_006461101
JGI:
Agabi_varbisH97_2_192637
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MQAPEDLEPIVRIRELAKDKVNFVLENVDLAFANSFRRVMMADLPTVAIDMVEIEINTTV
LPDEFIAHRLGQIPLLSSNCDEAIRYTRDCTCLAGCPFCSIMLNLHVSCNDDNTMNVTSN
HLDIMPFPEDQEQQTDPGEELSKRGEYFGHPVGKNDPNASPILICKIRKGQELKAKCTAK
KGIAKEHAKWSPCSAVAFEYDPHNKLRHTSYWFETDIKAEWPLGENAKEEEPPRDDEPFD
YNAKPTKFYFEVETDGSLSPQEVVMKGLAELQTKLANLIYGLKTQPELEMIPSDQPPNGA
AAETGGWSMSAANPPGPASSGLPTGAWTGGASSQWGNTSPGQRSATNATGWGASPNAASW
SSGATAGWSSPGQQSNGWNV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaccggaagacctcgaacccattgtcaggatacgcgaactcgctaaagataaa
gtcaattttgttctcgagaatgtagatctcgctttcgccaactcatttcgtcgagtgatg
atggcagaccttccaaccgttgccattgacatggttgaaatcgaaatcaatacgaccgta
ttaccagatgaattcattgctcatcgtctggggcaaatcccgttactaagttcaaattgc
gacgaagctatccgatatacaagagattgtacatgccttgcaggctgtcctttttgctcc
attatgctcaaccttcatgtttcatgtaatgacgataacactatgaacgtcacaagtaac
catctcgatatcatgcctttcccggaagaccaagagcagcagaccgatccaggagaagaa
ttgtcaaagcgaggagaatactttggccatcctgtggggaaaaacgacccaaatgcgtca
cccatcctgatctgtaagatccgtaaaggccaagagttgaaagccaagtgtaccgctaaa
aagggtatagccaaagaacatgccaaatggtcgccatgctctgctgtggctttcgagtat
gatccccacaataaactccggcatacctcatattggttcgagaccgacataaaggctgaa
tggcccctgggcgagaatgcgaaggaggaggaaccaccacgagacgatgagcccttcgat
tacaatgcgaagccaacgaagttctattttgaagttgaaactgatggcagcctaagcccg
caagaggtcgtaatgaagggtctcgctgaactgcaaacaaaattagctaacctcatttac
ggcctgaaaacgcagccagagcttgagatgatacctagtgatcaaccaccaaatggtgcc
gcagccgaaacgggaggttggagtatgtcagctgctaatcctccgggcccagcatcatct
ggactcccaacaggcgcttggactggaggtgcgagcagccagtggggaaatacaagtccg
ggacaaagaagtgctaccaacgccacaggctggggtgcgagtccaaatgctgcatcgtgg
tctagtggcgcaactgcaggctggtcaagtccaggtcagcaatcgaacggttggaatgtg
tga
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integrated database retrieval system