Agaricus bisporus var. bisporus H97: AGABI2DRAFT202225
Help
Entry
AGABI2DRAFT202225 CDS
T03140
Symbol
AGABI2DRAFT_202225
Name
(RefSeq) hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AGABI2DRAFT202225 (AGABI2DRAFT_202225)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abv03021
]
AGABI2DRAFT202225 (AGABI2DRAFT_202225)
Enzymes [BR:
abv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AGABI2DRAFT202225 (AGABI2DRAFT_202225)
Transcription machinery [BR:
abv03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
AGABI2DRAFT202225 (AGABI2DRAFT_202225)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
zf-RING_7
DUF2786
Motif
Other DBs
NCBI-GeneID:
18083937
NCBI-ProteinID:
XP_006459816
JGI:
Agabi_varbisH97_2_202225
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MKDAVSHKSPKVIKKLQFSLLNAQDTVKISEFEITHRDLYTPVDRLPVQNGVLDRRLGTT
DKNAFCETCGQSYVHCVGHYAYIKLVVPVFHIGYFKHIISVLQAICKTCARVLLEEPDRR
TFIKRFRRPNLENIQRQALSKSVNATARKVVHCPYCSAINGTVKKAGALKIIHDKFRAKK
TAEEMEKWKKTFTKAVEAQKELSMYLNKAAHEELNPLKVLDLFRRVSDEDCELLGLQPAW
GRPEEFVWQYLSVPPVCIRPSVAQDGASNEDDLTVKLTEIVFTNALIKKGLLRGSPTPQF
MEQWDFLQLSVAMYVNSELPGVPSQPGQKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGRT
VISPDPNLRIDEVAVPERVAKILTYPERVTPHNIEMLRKAVRNGPDVHPGANYVSRAETK
KILRFPNRNSIADGLAVGDVVERQIIDGDIVLFNRQPSLHKLSIMCHRAKVRPWRTFRLN
ECVCGPYNADFDGDEMNLHVPQTDEARAEALELMSVKHNLVTPRNGDPVIAAIQDFITAS
YLLSRKDTFFDRRQFTQICCYFGDANMQIDIPPPTIWKPARLWTGKQVFNVLMRPNKNSE
VLVNVECKCNKWEEAKPENYPSRMIPANDLSPNDGWLVVVNSEIMCGVMDKATVGSGKKK
SIFGVILRDYGPHEAAAAMNRLAKLCARYLANYGFSLGINDVIPGPQLKARKESLVEKAY
ADCQDLIALAKKGKLENKPGCNQEQTLEALISSVLSKVREAVGQICMKELSRHNAPLIMA
TCGSKGSVINVSQMVACVGQQIIAGHRVPNGFQDRSLPHFPKKSKEPPSKGFVRNSFYSG
LVATEFLFHAISGREGLVDTAVKTAETGYMQRRLMKALEDLTTQYDLSVRNSTGGVVQFR
YGDDGLDPACLEGDAQPIDLERTWRHVSASAGRAGRSLLPFEVLELTDQTLATPRFVNEF
TQTYLDILRDFIHNNVARNIAEHRQSRGMFEALERDTEWDADTDLSMGATDSDLSIVDNK
AKVTEEQLRRFLHVCWAKYAKARIEPGSTVGAVGAQSIGEPGTQMTLKTFHFAGVASMNV
TLGVPRIKEIINAAKAISTPIISCKLVTRSSEASARIVKGRLEKTLLGDVASVLEEAWAP
EYVYICILIDTEAIRKLQLELTLDDIKWAIVNWKKLKVKQESIIVIPNKQRLRIYVDGQD
KYYRLRELKRGLPNIVVKGVPTISRAIINIKDQDDAKGKKGDKELLVEGYGLQKCMITEG
VVGEATTSNHVIEVAQVLGIEAARRTIINEIQYTMKSHDMIIDPRHVMLLGDVMTYKGEV
LGITRFGVAKMKDSVLMLASFEKTTDHLFDASAFGKTDSISGVSESIIMGNPAATCGTSM
PALVRPSPVLKKPRKLLFEGAL
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgccgtctcccacaaaagcccaaaagtaataaaaaaactccagtttagccta
cttaatgcccaggacaccgtcaagatttcagagtttgaaatcactcatcgtgatctttat
acccccgtcgacagacttcctgttcagaatggtgtcctagatcgccgcctgggaacaaca
gacaagaacgcattctgcgagacatgcggccagtcatacgtccactgtgtcggtcattat
gcctacatcaagcttgtcgtcccagtcttccacatcggttattttaaacatattatttca
gtactgcaggccatatgtaaaacttgtgcaagagtccttctcgaagaaccagatagacga
acattcattaaacgcttccggcgaccaaatctcgaaaatattcaacgccaggctctctca
aaatctgttaatgctacggctcgcaaagtcgtgcactgtccatactgttcagcaataaac
ggtactgtcaaaaaggcgggagctttgaaaatcattcacgataaattccgtgccaaaaaa
accgcggaggagatggagaaatggaaaaagactttcacaaaggcggttgaagcccagaag
gaattgtcaatgtacctcaacaaagctgcacacgaggaactcaatcctctcaaagttctg
gacctctttcgacgtgtttctgatgaggactgtgaactactgggtctacaacctgcatgg
ggtcgaccagaagaattcgtctggcaatacttatccgtacctcctgtctgcatacggcct
tcagttgctcaagatggtgcctccaatgaagatgatctgactgttaagctgacggaaatt
gtattcacaaatgctctcataaaaaaagggttgctgcgaggttctccaacgcctcagttc
atggaacaatgggatttcctccaactatcagtagcgatgtatgttaattcagaactacct
ggtgtaccatcgcagcctggccaaaagcctatccgcggtttcgttcaacgactgaagggg
aagcagggccgatttcgaggaaacctctccggtaaacgtgtcgatttttctggaagaacc
gtcatttctccggaccccaacctccgcattgatgaagtcgcagtaccggagagggtagcg
aaaattctcacttatcccgaacgagtcacaccgcacaatattgaaatgctacgaaaagct
gtaaggaacgggccagacgtacatccaggggcaaactatgtcagtcgagcggaaacgaaa
aagatcttgagatttccgaatagaaattctattgcagatggacttgcggtcggagatgta
gttgagcgtcagattattgacggtgatattgtgttattcaacagacaaccaagtttacat
aagttatcaatcatgtgccatcgggccaaagtgagaccatggcggacgttcagactcaac
gaatgtgtttgtggaccctacaacgcagattttgacggagacgagatgaacttgcatgtt
cctcagactgatgaggcaagggcagaggcgcttgaacttatgagtgtcaagcacaaccta
gtaacacctcgaaatggtgatcctgtcattgccgccatccaagactttattacggcatcg
tacctgctttctcgcaaggatacattctttgatcgccggcaatttactcagatttgttgt
tatttcggggatgcaaatatgcaaatcgatatacctccaccaacgatatggaaaccagct
aggctctggaccggcaaacaggttttcaacgtcctcatgcgaccgaataagaattctgaa
gtcttggtcaacgtcgaatgcaagtgtaacaaatgggaggaggctaaacctgaaaattat
ccttcacgcatgatacccgccaatgatttatcccctaatgacggatggcttgttgtggtc
aatagcgaaattatgtgcggtgttatggacaaagctactgttggaagtggcaagaaaaaa
tctatttttggtgtcattctccgtgactacgggccacatgaagccgcggctgctatgaat
cgactcgccaaactttgtgctcgttacctcgcaaattacggcttctctctgggcatcaat
gacgtcattccgggaccgcaattaaaagccaggaaagagtctctggtcgaaaaagcctat
gctgattgtcaagaccttattgcgctcgccaaaaaaggtaaactggagaacaagcctgga
tgtaaccaagaacagactctcgaagccctcatatcttccgtgctatccaaagtccgcgaa
gccgttggccaaatttgtatgaaagagctgagtcgccataatgcgcccttgatcatggct
acgtgtggttcgaaaggctcagtcatcaacgtttcacaaatggttgcttgtgttggacaa
cagatcatagcgggtcatcgtgttccaaacggttttcaggatcgctcactgcctcatttt
cctaaaaagtcgaaggagcctccgtcgaagggatttgtccgcaacagtttttattctggc
ctggtcgctactgaatttttgtttcacgccatttcgggtcgtgagggtcttgttgatacg
gctgtgaagaccgcggagacgggttacatgcaacgacgcttgatgaaggcccttgaagac
ttgacgactcaatatgatctttctgttcgaaattcgactggcggcgttgtacagttccgt
tacggagatgatggtttagacccagcttgcttagaaggcgacgcgcaacccattgaccta
gaaagaacctggaggcacgtttcggcctctgcaggtcgtgctgggcggagtttattacca
tttgaggtcctcgagctaaccgatcaaacattagcgactcctcgtttcgtgaatgaattt
acgcaaacatatttggacattctccgtgacttcatccataataatgttgcacgcaacatc
gcggaacataggcaaagtcgcggtatgtttgaagctttggaacgtgacaccgaatgggac
gcggatacagacctctcgatgggtgctacggattccgacctttcgatcgttgataacaag
gcaaaagtgacggaggaacagttacgcagattccttcacgtttgctgggcaaaatatgcg
aaagcacgtattgagccagggtccaccgttggcgctgtgggtgctcagtcgataggtgag
cccggcactcagatgacgctgaaaactttccactttgccggagtcgcatcaatgaacgta
acgttgggggttccgcgtatcaaagaaatcatcaatgctgccaaagcgatcagtacacca
atcataagttgtaaactcgtgacccgtagcagcgaagcttccgcgcgcattgtcaaaggc
cgcctcgaaaagactctactaggagatgttgcaagtgtccttgaagaagcctgggctcct
gaatatgtttatatttgtatcctcattgacactgaagccatcaggaaacttcagcttgaa
ctgacacttgacgatatcaaatgggcgatcgtgaactggaagaaactcaaggtcaaacaa
gagtcgataattgtcattccaaacaaacaacgtttgcgcatctatgtggatggtcaagac
aagtattatcgactacgtgagttgaaacgtggcctgcccaacattgtcgtgaaaggtgtt
ccaaccatttcacgtgccattatcaatatcaaggaccaagacgacgccaagggtaagaag
ggggacaaggagctgctagttgaagggtatggcttgcaaaagtgtatgattacggaaggt
gtcgtcggagaagccactacgtcaaaccatgtcatcgaagttgcacaagtcctaggaatc
gaagcagcccgaagaacaatcattaacgaaatccagtacactatgaagtcgcacgacatg
atcattgacccgcggcacgtaatgcttcttggagacgtcatgacgtataagggtgaggtc
cttggaattacacggttcggagttgcgaagatgaaagacagcgttctgatgttggcatcg
ttcgagaagacaacggatcacttgtttgatgcatctgcattcggcaagactgatagcata
tcaggcgtatcagagagtattattatgggcaaccctgcagcaacatgtggcacatcaatg
cctgcactcgttaggccatctcccgttctgaaaaagcctcgaaaattgttgttcgagggt
gcattataa
DBGET
integrated database retrieval system