Agaricus bisporus var. bisporus H97: AGABI2DRAFT215454 Help Entry AGABI2DRAFT215454 CDS       T03140                                  Symbol AGABI2DRAFT_215454 Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism abv  Agaricus bisporus var. bisporus H97 Pathway abv03020   RNA polymerase abv03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:abv00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     AGABI2DRAFT215454 (AGABI2DRAFT_215454)   09124 Replication and repair    03420 Nucleotide excision repair     AGABI2DRAFT215454 (AGABI2DRAFT_215454)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:abv03021]     AGABI2DRAFT215454 (AGABI2DRAFT_215454)    03400 DNA repair and recombination proteins [BR:abv03400]     AGABI2DRAFT215454 (AGABI2DRAFT_215454) Enzymes [BR:abv01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      AGABI2DRAFT215454 (AGABI2DRAFT_215454) Transcription machinery [BR:abv03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      AGABI2DRAFT215454 (AGABI2DRAFT_215454) DNA repair and recombination proteins [BR:abv03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       AGABI2DRAFT215454 (AGABI2DRAFT_215454) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_3 RNA_pol_Rpb1_7 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R Motif Other DBs NCBI-GeneID:  18084854 NCBI-ProteinID:  XP_006454855 JGI:  Agabi_varbisH97_2_215454 LinkDB All DBs Position Unknown AA seq 1800 aa AA seqDB search MLGHQFAYSSAPIRKVKEVQFGILSPEEIKATSVAKIEHPEVMDEATHKPKMGGLMDPRM GTIDRNFKCQTCGEGMSECPGHFGHIELARPVFHPGFIVKVKKILECICVNCGKLKADTS DPNFADKIRHIRESKARLAVVWAHCKAKTVCEPDDIKEDGVDPEADEPKKGHGGCGHIQP QVRKEGLKLFVQYKKTKDDDDPDKRLITPSEVYTVFKKMTDSDLHLLGLSDEYARPEWMI LTVMPVPPPPVRPSIAVDGGAMRSEDDLTYKLGDIIKASANVRRCEQEGAPAHVISEFEQ LLQFHVATYMDNDIAGIPQALQKSGRPVKALRARLKGKEGRLRGNLMGKRVDFSARTVIT GDPNLELDEVGVPKSIAMNLTFPERVTPYNITYLQELVRNGPTTYPGARYVVRDTGERID LRYNKRADAFLQYGWIVERHLKDGDFVLFNRQPSLHKMSMMSHRVRLMPYSTFRLNLSVT PPYNADFDGDEMNMHVPQSEETRAELSQVAWVPRQIISPQANKPVMGIVQDTLCGVRKFT LRDCFLDWNHVQNILLWVPDWDGTIPTPAILKPKPLWTGKQILSMTIPRGINIHRSPDPK SSNPVFDDGMLIENGELIFGIVDKKTVGATQGGLVHVVFREKGPEVTRQLFTGLQRVVNF WLFHNGFSIGIGDTIADMKTMSYITQTIIERKAEVTKIIEDATHDRLKPKPGMTIRESFE SMVERQLNLARDTSGQYAQKHLKEDNNVKQMVVAGSKGSFINISQMSVCVGQQSVEGRRI PFGFRHRTLPHFTKDDFTPESRGFVENSYLRGLTPQEFFFHAMAGREGLIDTAVKTAETG YIQRRLVKALEDVMVCYDGTVRNSLGDLIQFVYGEDGMDGAFIEKQTIETFGLNDKEFQH NYRVDVTDPEGGFLPGVLQVGIDDSSLELQQKLDEEYKQLVEDRKTLRYFIFPRTPTTQP HYLPVNLLRIVQNASQIFHIDRRKPSDLEPTYIVDAVRELEKRLVVVRGEDPLSYEAQEN ATLMFKMHLRATFATRRVLEKFHLTREAFDWVLGEVEAKFNQSVVHPGEMCGTLSAQSIG EPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINVATNIKTPSLTVYLEPEISVSPTLAKN VQQELAYTSLRTVTAAVEIWYDPDPTSTIIEEDSVFVESFFAIPDEETESKLHLQSPWLL RLEMDRAKMIDRKLMMQYVANRIGDSFKTDLFVIWSEDNSEKLIIRCRVLGSPDKDDEGY GSVEEDIFLRQLENTMLNSVSLRGVKGINRVFLTEADKVMIRPDGTIETGKDKEWVLETD GVNLKTVMCIDGVDFTRTYSNSCVEIFNVLGIEAARAAIMKELRSVIEFDGSYVNYRHLA LLCDLMTHRGSLMAITRHGINRADTGALMRCSFEETVEVLMEAAAVGEKDDCHGIAENVM FGQMAPMGTGAFEVALDIDMLKDAIVDHSLPVQSMLAAHLEDGMTPGQVAMTPYDTNSPM WHDGMFKSESASFTPLASNGGDEASSFSFMPFGQSPLGAGGMSPGGPGYSPSSPNAYSPT SPSFVPQSPYGGATSPFGTSPYATSPFIHRAGGMTSPTYSPTSPTLNLTSPAYSPTSPRY SPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASPRYSPTSPRMSPSSPKYPPTS PMASPSSPKYSPPLPLILLHLPRTHRPLQHIVLHHLNGLLQALPRMERVEAIHTNQTLPG IEIFGETACLVFYVVNMRHIYFYYAHSCRIIHPPIPKSLVDFFFLCLVYRTLNTCLLSCW NT seq 5400 nt NT seq  +upstreamnt  +downstreamnt atgcttggccaccagtttgcgtactcttcggctcccatccgtaaggtgaaggaggttcag tttggtatcctctcaccggaagagattaaagccacgtctgtcgcaaagattgagcatcct gaagttatggatgaagctacccataaacctaaaatgggtggactcatggacccgcgaatg ggaacaatagaccgaaacttcaagtgccagacgtgtggtgagggaatgtctgagtgcccg gggcattttggtcacatagagttggcgaggcctgttttccacccgggttttattgtgaaa gtgaagaaaattttggaatgtatttgtgtaaactgcggaaaattgaaagccgacacctcg gatcctaatttcgcggacaaaattcgccatatacgcgagtcaaaagctcgcttggccgtc gtttgggctcattgcaaggccaaaacggtttgtgaacctgatgatatcaaagaggatggt gtcgacccagaagccgatgaaccaaagaagggtcatggtggttgcggtcatatccaaccg caggtaagaaaggaaggtttaaagctttttgttcaatacaagaagactaaggacgatgat gaccctgacaaacgcttaataaccccttcggaagtgtataccgtctttaaaaagatgaca gattccgatctccacctcctgggtctttctgacgagtatgctcgacccgagtggatgatc ctgactgttatgcctgtaccacctcctcccgttcgccccagtatagctgttgatggtggt gctatgcgtagtgaagatgatttgacgtacaagcttggtgacatcatcaaggcttctgct aatgttcgtcggtgcgagcaggaaggtgcacccgctcacgtcatttcagagtttgagcag cttttacagtttcacgttgccacgtacatggataatgacattgcaggtatccctcaagct ctccagaaatccggcagacctgtgaaagcccttcgagcacgactgaagggcaaggagggt cgtctacgcggcaatctaatgggcaagcgtgttgatttttcggctcgtaccgtcatcact ggtgatcccaacctggaattggatgaagtcggtgtcccaaagagtatagccatgaatctg actttccctgaacgtgtgacaccttataacataacctaccttcaagaactcgtgcggaat ggccccactacgtatccaggtgctcgatatgttgtccgggatactggagagaggatagat ttaaggtataataagcgtgccgatgcatttttgcagtatggttggattgtggaacgtcat ctcaaagatggagacttcgtgctgtttaaccgacagcccagtttgcacaaaatgagtatg atgagtcaccgtgttcgattgatgccttattccacttttcgactaaatctttcggtcacg ccaccttacaatgctgactttgatggtgatgagatgaacatgcatgtaccacaaagcgag gaaacgagagctgaactatcgcaagtcgcatgggttcctcgtcagataatatcacctcaa gcaaacaaacctgtcatgggcattgtacaggataccttatgtggtgttcgcaaattcact ctccgtgactgctttctagattggaatcatgttcaaaatatccttctttgggtcccagat tgggacggtactatccccactcctgctattctcaaacccaagccactgtggactggaaaa cagattctcagcatgacaattcctcgtggtatcaacatccaccgatccccagatcccaag tcatcaaatcctgttttcgatgacggtatgctcattgaaaatggggagctgatctttggt atcgtcgataagaagacggttggtgctacgcaaggtggcctggtccacgtcgtgttccgc gaaaagggtccggaagtcacacggcaactcttcactggtctacaacgtgtcgtgaacttt tggttattccataacgggtttagtattggtatcggtgacactatcgctgatatgaagact atgtcgtatatcacacagactattatcgaacggaaggcagaagttacaaaaatcatcgag gatgctacccacgaccgtctcaaacccaagcctggtatgaccattcgtgaatctttcgag agtatggtcgaacgtcaactcaatctggctcgtgatacatctggtcaatacgctcagaag catttgaaggaggataacaatgtcaagcagatggtggttgccggatccaaaggttcattc attaacatctcgcagatgtctgtttgtgtcggtcaacaatcagttgagggtcgtcgtatt ccctttggtttccgccatcgcacgttaccacatttcaccaaggatgatttcaccccagag tcaaggggtttcgtcgagaactcctacttgcgtggtttgacgcctcaggaattcttcttc catgctatggctggtcgtgaaggtcttatcgataccgctgtcaagactgccgaaacaggt tatattcaacgtcgtcttgtcaaagcactcgaggatgtcatggtttgttacgatggcacg gtccgcaattccctcggcgacttgattcaattcgtctatggtgaagacggaatggatggt gcttttattgagaagcagaccattgaaactttcggactcaacgataaggagttccagcac aattatcgcgttgacgtcacggaccctgagggtggtttccttcctggtgtactccaggtc ggcatcgatgatagctcactcgagcttcaacaaaaacttgacgaagaatacaagcaattg gttgaggatcgcaagactcttcgttactttattttccctcgtacacctacgacacagcct cactatctacctgtcaacctgcttcgtatcgtccagaatgcctcgcaaatcttccacatc gatcgacggaagccgagtgacctcgaacctacatatattgtcgatgctgttcgggaactc gagaaacgtctcgttgtagttcgtggtgaagatcctctaagttacgaggctcaggaaaat gctacattgatgttcaagatgcatctccgagcaacgtttgctactcgtcgcgttttggaa aagtttcatctcactcgcgaagcgttcgattgggtcctaggtgaagttgaagcgaagttc aaccagtcggttgtacaccccggagaaatgtgcggcactctttcagctcaatccattggt gaaccggcaacgcagatgacgctcaatactttccattacgctggtgtctcgagtaagaat gtcacccttggtgtgccacgtctgaaagaaatcatcaatgttgccaccaacatcaaaacc ccctcccttactgtctatctcgaaccagaaatatccgtttccccgacccttgcgaaaaac gtccagcaagaactggcgtatacatcgctccgaactgtcactgccgctgtggaaatctgg tacgaccccgaccccacctctaccatcattgaggaagactctgtctttgtcgagtctttc ttcgctattcctgatgaagaaacggaatcgaagctccacctacagtcaccgtggcttctt cgtcttgagatggatcgtgccaagatgattgataggaagcttatgatgcaatacgttgcc aaccggattggagacagctttaagacggatctgttcgtcatttggtcagaagataactcg gagaagttgattattcgttgtcgtgtgttgggtagcccggataaagatgatgaaggttat ggttccgttgaagaagatattttcctgaggcagttggagaacaccatgctcaactctgtt agcttacgtggtgtgaagggcatcaatagggtgttcttgacggaggcggataaagttatg atcaggcccgatggtaccatcgagaccggaaaggacaaggagtgggtgttggaaacagac ggcgtcaatctgaaaactgtgatgtgtatagatggtgtcgactttacccgaacgtattcc aacagctgcgtcgagatcttcaatgttctcggtatcgaagcagcccgcgccgcgattatg aaggagttgcgtagtgtcatcgaatttgacggttcttatgtcaactatcgccatctcgca cttctttgtgatctcatgactcaccgtggttccctcatggccatcactcgtcatggaatc aatcgagcagatactggagcgttgatgaggtgttccttcgaagaaactgttgaagtcttg atggaagctgcggctgtgggcgagaaagacgattgtcatggtattgccgaaaacgtaatg tttggtcagatggctcctatgggcacgggagcatttgaagttgctcttgatattgatatg ctcaaggatgccattgttgatcatagcttgcccgttcaatctatgcttgcagcccacctg gaagatggtatgacaccaggacaagtggcaatgacgccttacgataccaactctcctatg tggcatgatggcatgttcaagagcgaatcagcgtcgttcactcccttggcgtcgaatggt ggtgatgaggcgtcgagtttcagcttcatgcctttcggtcaaagtcctctcggtgcgggt gggatgtcgcctggtggacctggatacagcccgagctccccaaacgcatactcgcctacc tcaccaagtttcgttcctcagtcaccttatggaggagctacatcacctttcggaacgtcg ccgtatgcaacgtctcccttcatccacagagccggggggatgacttctccaacctattcg cccacttcacctacgctcaatctcacgtctccggcatattcgcctacgagtccacgttat tcgccaacatcgccatctttctctccaacatcacctcgctacagtccgcagtccccatcg ttcagtcccacttcaccgcgttactcacccacgagtccctctttcagtcctgcgtcacca agatattcgccaacctctcctcgtatgagcccttcgtcaccaaaatacccacccacgtcc cctatggcttcgccatcgtcgcccaaatattccccacctctcccgcttattctcctgcat ctcccgcgtactcaccggcctctccagcatatagtcctacatcacctcaatggtctcctg caagccctgcccagaatggagcgggtagaagccattcataccaatcaaacccttcctggg attgagatatttggtgaaacagcttgtcttgttttctacgtcgtcaacatgcgtcacatc tacttttattatgcgcattcttgtagaataatacatccgcctattccaaagtcgctagtt gattttttttttctgtgtttagtctaccgaactctgaatacatgcttgttgtcttgttgg

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